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ONTOLOGY REPORT - ANNOTATIONS


Term:inner cell mass cell differentiation
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Accession:GO:0001826 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of an inner cell mass cell.
Comment:See also the Anatomical Dictionary for Mouse Development ontology terms 'TS4, inner cell mass ; EMAP:14'.


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inner cell mass cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24036311) Ensembl
MGI
PMID:24036311 GO_REF:0000107 NCBI chrNW_004624766:2,823,561...2,851,742
Ensembl chrNW_004624766:2,823,229...2,851,742
JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO (PMID:10518496) MGI PMID:10518496 NCBI chrNW_004624871:4,662,104...4,713,125
Ensembl chrNW_004624871:4,661,669...4,712,960
JBrowse link
G Nle1 notchless homolog 1 acts_upstream_of_or_within ISO (PMID:16611995) MGI PMID:16611995 NCBI chrNW_004624875:2,997,648...3,006,345
Ensembl chrNW_004624875:2,998,006...3,006,303
JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:19372391)
(PMID:20639862), (PMID:21295276)
UniProt
MGI
PMID:19372391 PMID:20639862 PMID:21295276 NCBI chrNW_004624754:2,846,479...2,966,845
Ensembl chrNW_004624754:2,873,456...2,965,097
JBrowse link
inner cell mass cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23824537) Ensembl
MGI
PMID:23824537 GO_REF:0000107 NCBI chrNW_004624785:8,356,238...8,405,877
Ensembl chrNW_004624785:8,369,922...8,408,919
JBrowse link
G Lats2 large tumor suppressor kinase 2 acts_upstream_of_or_within ISO (PMID:23824537) MGI PMID:23824537 NCBI chrNW_004624776:16,572,598...16,640,412
Ensembl chrNW_004624776:16,585,025...16,638,520
JBrowse link
G Prdm14 PR/SET domain 14 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24183668) Ensembl
MGI
PMID:24183668 GO_REF:0000107 NCBI chrNW_004624744:21,092,091...21,121,313
Ensembl chrNW_004624744:21,104,798...21,120,591
JBrowse link
inner cell mass cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:23824537) Ensembl
MGI
PMID:23824537 GO_REF:0000107 NCBI chrNW_004624785:8,356,238...8,405,877
Ensembl chrNW_004624785:8,369,922...8,408,919
JBrowse link
G Lats2 large tumor suppressor kinase 2 acts_upstream_of_or_within ISO (PMID:23824537) MGI PMID:23824537 NCBI chrNW_004624776:16,572,598...16,640,412
Ensembl chrNW_004624776:16,585,025...16,638,520
JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO (PMID:21146513) MGI PMID:21146513 NCBI chrNW_004624735:1,276,382...1,278,584
Ensembl chrNW_004624735:1,276,302...1,279,181
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17637
    developmental process 6393
      cellular developmental process 4306
        cell differentiation 4305
          inner cell mass cell differentiation 8
            inner cell mass cell fate commitment 3
            inner cell mass cellular morphogenesis 3
Path 2
Term Annotations click to browse term
  biological_process 17637
    developmental process 6393
      anatomical structure development 5985
        multicellular organism development 4822
          embryo development 1256
            embryo development ending in birth or egg hatching 828
              chordate embryonic development 812
                in utero embryonic development 520
                  blastocyst development 146
                    blastocyst formation 57
                      inner cell mass cell differentiation 8
                        inner cell mass cell fate commitment 3
                        inner cell mass cellular morphogenesis 3
paths to the root