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ONTOLOGY REPORT - ANNOTATIONS

Term:inner cell mass cell differentiation
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Accession:GO:0001826 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of an inner cell mass cell.
Comment:See also the Anatomical Dictionary for Mouse Development ontology terms 'TS4, inner cell mass ; EMAP:14'.


show annotations for term's descendants           Sort by:
inner cell mass cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO
IEA 		(PMID:24036311)
GO_REF:0000107 		RGD
Ensembl		 PMID:24036311 GO_REF:0000107 NCBI chr 1:174,571,952...174,601,974
Ensembl chr 1:165,137,215...165,167,303 		JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO
IEA 		MGI:1857856 (PMID:10518496)
GO_REF:0000107 		RGD
Ensembl		 PMID:10518496 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
G Nle1 notchless homolog 1 acts_upstream_of_or_within ISO
IEA 		MGI:3624778 (PMID:16611995)
GO_REF:0000107 		RGD
Ensembl		 PMID:16611995 GO_REF:0000107 NCBI chr10:67,834,059...67,844,771
Ensembl chr10:67,834,062...67,842,658 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:38243114), (PMID:38386558) 		Ensembl
RGD		 PMID:38243114 PMID:38386558 GO_REF:0000107 NCBI chr13:50,865,253...50,985,107
Ensembl chr13:48,316,301...48,433,326 		JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 acts_upstream_of_or_within
involved_in 		ISO (PMID:20639862), (PMID:21295276)
(PMID:19372391) 		RGD PMID:19372391 PMID:20639862 PMID:21295276 NCBI chr20:25,766,806...25,839,598
Ensembl chr20:25,768,120...25,833,052 		JBrowse link
G Tfap2c transcription factor AP-2 gamma involved_in ISO (PMID:38243114) RGD PMID:38243114 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995 		JBrowse link
inner cell mass cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 acts_upstream_of_or_within ISO
IEA 		MGI:1354386 (PMID:23824537)
GO_REF:0000107 		RGD
Ensembl		 PMID:23824537 GO_REF:0000107 NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640 		JBrowse link
G Lats2 large tumor suppressor kinase 2 acts_upstream_of_or_within ISO
IEA 		MGI:1333883 (PMID:23824537)
GO_REF:0000107 		RGD
Ensembl		 PMID:23824537 GO_REF:0000107 NCBI chr15:31,825,068...31,877,193
Ensembl chr15:31,825,092...31,877,220 		JBrowse link
G Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO
IEA 		(PMID:24183668)
GO_REF:0000107 		RGD
Ensembl		 PMID:24183668 GO_REF:0000107 NCBI chr 5:10,864,137...10,876,666
Ensembl chr 5:6,082,442...6,092,712 		JBrowse link
inner cell mass cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 acts_upstream_of_or_within ISO
IEA 		MGI:1354386 (PMID:23824537)
GO_REF:0000107 		RGD
Ensembl		 PMID:23824537 GO_REF:0000107 NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640 		JBrowse link
G Lats2 large tumor suppressor kinase 2 acts_upstream_of_or_within ISO
IEA 		MGI:1333883 (PMID:23824537)
GO_REF:0000107 		RGD
Ensembl		 PMID:23824537 GO_REF:0000107 NCBI chr15:31,825,068...31,877,193
Ensembl chr15:31,825,092...31,877,220 		JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO
IEA 		MGI:3717121 (PMID:21146513)
GO_REF:0000107 		RGD
Ensembl		 PMID:21146513 GO_REF:0000107 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      cellular developmental process 4838
        cell differentiation 4837
          inner cell mass cell differentiation 10
            inner cell mass cell fate commitment 3
            inner cell mass cellular morphogenesis 3
Path 2
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          embryo development 1381
            embryo development ending in birth or egg hatching 909
              chordate embryonic development 892
                in utero embryonic development 582
                  blastocyst development 163
                    blastocyst formation 60
                      inner cell mass cell differentiation 10
                        inner cell mass cell fate commitment 3
                        inner cell mass cellular morphogenesis 3
paths to the root