Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:phosphatidylserine binding
go back to main search page
Accession:GO:0001786 term browser browse the term
Definition:Binding to phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine.


show annotations for term's descendants           Sort by:
phosphatidylserine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07018244.2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr15:39,788,233...39,788,853 JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 enables IEA
ISO		 GO_REF:0000107
(PMID:17960134)		 Ensembl
RGD		 PMID:17960134 GO_REF:0000107 NCBI chr 7:106,404,827...106,476,902
Ensembl chr 7:106,404,958...106,476,902 		JBrowse link
G Anxa1 annexin A1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343 		JBrowse link
G Anxa10 annexin A10 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:27,738,712...27,805,648
Ensembl chr16:27,738,712...27,805,648 		JBrowse link
G Anxa11 annexin A11 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:1,412,373...1,457,814
Ensembl chr16:1,410,756...1,457,797 		JBrowse link
G Anxa13 annexin A13 enables ISO
IBA		 (PMID:27676605)
(PMID:15813707)
GO_REF:0000033		 RGD
GO_Central		 PMID:15813707 PMID:27676605 GO_REF:0000033 NCBI chr 7:89,884,356...89,936,907
Ensembl chr 7:89,884,356...89,936,907 		JBrowse link
G Anxa2 annexin A2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658 		JBrowse link
G Anxa3 annexin A3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:12,727,708...12,781,717
Ensembl chr14:12,719,795...12,781,617 		JBrowse link
G Anxa4 annexin A4 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:119,184,378...119,241,183
Ensembl chr 4:119,184,374...119,241,161 		JBrowse link
G Anxa5 annexin A5 enables IBA
ISO		 GO_REF:0000033
(PMID:12000961)		 GO_Central
RGD		 PMID:12000961 GO_REF:0000033 NCBI chr 2:119,314,007...119,344,703
Ensembl chr 2:119,314,007...119,353,369 		JBrowse link
G Anxa6 annexin A6 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:39,101,395...39,156,483
Ensembl chr10:39,097,109...39,156,433 		JBrowse link
G Anxa7 annexin A7 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:3,821,798...3,849,659
Ensembl chr15:3,821,845...3,849,385 		JBrowse link
G Anxa8 annexin A8 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:9,397,144...9,412,072
Ensembl chr16:9,397,113...9,412,043 		JBrowse link
G Anxa9 annexin A9 enables ISO
IBA		 (PMID:12832069)
GO_REF:0000033		 RGD
GO_Central		 PMID:12832069 GO_REF:0000033 NCBI chr 2:182,873,185...182,884,501
Ensembl chr 2:182,872,929...182,883,374 		JBrowse link
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 enables ISO (PMID:18034774) RGD PMID:18034774 NCBI chr16:2,118,503...2,166,741
Ensembl chr16:2,121,255...2,166,692 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 enables ISO (PMID:18034774) RGD PMID:18034774 NCBI chr 7:20,135,248...20,184,757
Ensembl chr 7:20,135,375...20,184,754 		JBrowse link
G Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 enables IEA
ISO		 GO_REF:0000107
(PMID:16431365)		 Ensembl
RGD		 PMID:16431365 GO_REF:0000107 NCBI chr 7:95,786,130...96,093,111
Ensembl chr 7:95,787,818...96,092,754 		JBrowse link
G Axl Axl receptor tyrosine kinase enables ISO (PMID:21501828) RGD PMID:21501828 NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265 		JBrowse link
G Cavin2 caveolae associated protein 2 enables ISO
ISS		 (PMID:10191091), (PMID:2390065)
GO_REF:0000024		 RGD
UniProt		 PMID:2390065 PMID:10191091 GO_REF:0000024 NCBI chr 9:50,302,079...50,314,096
Ensembl chr 9:50,301,206...50,314,147 		JBrowse link
G Cd300a Cd300a molecule enables ISO (PMID:22302738) RGD PMID:22302738 NCBI chr10:99,929,801...99,942,674
Ensembl chr10:99,929,801...99,942,674 		JBrowse link
G Cd300lf Cd300 molecule-like family member F enables ISS
ISO		 GO_REF:0000024
(PMID:21865548)		 UniProt
RGD		 PMID:21865548 GO_REF:0000024 NCBI chr10:100,359,942...100,376,130
Ensembl chr10:100,359,943...100,376,041 		JBrowse link
G Cidec cell death-inducing DFFA-like effector c enables ISO (PMID:30361435) RGD PMID:30361435 NCBI chr 4:146,569,288...146,582,173
Ensembl chr 4:146,569,289...146,582,173 		JBrowse link
G Cpne1 copine 1 enables ISO
IEA		 (PMID:9430674)
GO_REF:0000107		 RGD
Ensembl		 PMID:9430674 GO_REF:0000107 NCBI chr 3:144,587,531...144,629,911
Ensembl chr 3:144,588,995...144,598,636 		JBrowse link
G Cpne6 copine 6 enables ISO (PMID:9886090) RGD PMID:9886090 NCBI chr15:28,998,293...29,005,044
Ensembl chr15:28,998,293...29,005,044 		JBrowse link
G Dppa1 developmental pluripotency associated 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:30,998,049...31,017,756
Ensembl chr10:30,998,049...31,017,756
Ensembl chr12:30,998,049...31,017,756 		JBrowse link
G ENSRNOG00000064215 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:14,510,231...14,510,897 JBrowse link
G ENSRNOG00000068776 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 2:178,284,626...178,286,346 JBrowse link
G Fcho2 FCH and mu domain containing endocytic adaptor 2 enables ISS
ISO		 GO_REF:0000024
(PMID:21762413)		 UniProt
RGD		 PMID:21762413 GO_REF:0000024 NCBI chr 2:30,079,143...30,181,639
Ensembl chr 2:30,080,962...30,181,241 		JBrowse link
G Gap43 growth associated protein 43 enables IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:1826685 GO_REF:0000033, RGD:9835424 NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045 		JBrowse link
G Gas6 growth arrest specific 6 enables ISO
ISS		 (PMID:21501828)
GO_REF:0000024		 RGD
UniProt		 PMID:21501828 GO_REF:0000024 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904 		JBrowse link
G Gramd1b GRAM domain containing 1B enables ISO (PMID:30220461) RGD PMID:30220461 NCBI chr 8:40,654,492...40,893,869
Ensembl chr 8:40,659,182...40,893,925 		JBrowse link
G Gsdma gasdermin A enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:83,614,336...83,639,543
Ensembl chr10:83,627,051...83,639,543 		JBrowse link
G Gsdmc gasdermin C enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:95,594,015...95,606,106
Ensembl chr 7:95,594,015...95,611,344 		JBrowse link
G Gsdmd gasdermin D enables IBA
ISO		 GO_REF:0000033
(PMID:27383986)		 GO_Central
RGD		 PMID:27383986 GO_REF:0000033 NCBI chr 7:107,542,489...107,547,051
Ensembl chr 7:107,542,083...107,547,055 		JBrowse link
G Gsdmdl1 gasdermin D like 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:95,620,052...95,630,546
Ensembl chr 7:95,620,061...95,630,532 		JBrowse link
G Haus8l2 HAUS augmin-like complex, subunit 8 like 2 enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533 		JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 enables IBA
ISO		 GO_REF:0000033
(PMID:18083575)		 GO_Central
RGD		 PMID:18083575 GO_REF:0000033 NCBI chr10:31,118,667...31,151,730
Ensembl chr10:31,119,088...31,151,698 		JBrowse link
G Havcr1l1 hepatitis A virus cellular receptor 1 like 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:30,919,860...30,941,388
Ensembl chr10:30,923,809...30,941,108 		JBrowse link
G Havcr1l2 hepatitis A virus cellular receptor 1 like 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:30,963,058...30,983,169
Ensembl chr10:30,968,739...30,981,979 		JBrowse link
G Hmgb1 high mobility group box 1 enables ISO (PMID:18768881) RGD PMID:18768881 NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565
Ensembl chr16:5,901,586...5,978,565 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 enables IEA
ISO		 GO_REF:0000107
(PMID:21238931)		 Ensembl
RGD		 PMID:21238931 GO_REF:0000107 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259 		JBrowse link
G Jph2 junctophilin 2 enables ISO
ISS		 (PMID:24001019)
GO_REF:0000024		 RGD
UniProt		 PMID:24001019 GO_REF:0000024 NCBI chr 3:151,994,768...152,058,941
Ensembl chr 3:151,994,778...152,058,904 		JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate IDA RGD PMID:8276751 RGD:9685327 NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012 		JBrowse link
G Mark1 microtubule affinity regulating kinase 1 enables ISO
ISS
IEA		 (PMID:21145462)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:21145462 GO_REF:0000024 GO_REF:0000107 NCBI chr13:96,450,189...96,555,304
Ensembl chr13:96,451,487...96,555,173 		JBrowse link
G Mfge8 milk fat globule EGF and factor V/VIII domain containing enables ISO CHEBI:18303 (PMID:21196491) RGD PMID:21196491 NCBI chr 1:133,064,665...133,080,069
Ensembl chr 1:133,064,665...133,080,073 		JBrowse link
G Mme membrane metallo-endopeptidase enables ISO
IEA		 (PMID:22183801)
GO_REF:0000107		 RGD
Ensembl		 PMID:22183801 GO_REF:0000107 NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792 		JBrowse link
G Osbpl10 oxysterol binding protein-like 10 enables ISO (PMID:23934110) RGD PMID:23934110 NCBI chr 8:114,661,050...114,918,664
Ensembl chr 8:114,660,743...114,918,625 		JBrowse link
G Osbpl5 oxysterol binding protein-like 5 enables ISO (PMID:23934110), (PMID:26206935) RGD PMID:23934110 PMID:26206935 NCBI chr 1:198,862,071...198,916,469
Ensembl chr 1:198,862,055...198,916,469 		JBrowse link
G Osbpl8 oxysterol binding protein-like 8 enables ISO (PMID:26206935) RGD PMID:26206935 NCBI chr 7:46,596,944...46,749,888
Ensembl chr 7:46,596,983...46,749,888 		JBrowse link
G Plcd1 phospholipase C, delta 1 enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:118,795,196...118,818,186
Ensembl chr 8:118,795,201...118,818,186 		JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 enables ISO
IBA		 (PMID:18191643)
GO_REF:0000033		 RGD
GO_Central		 PMID:18191643 GO_REF:0000033 NCBI chr 5:166,805,309...166,813,339
Ensembl chr 5:166,804,837...166,813,155 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 enables ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Rs1 retinoschisin 1 enables ISO (PMID:17325137), (PMID:20677810) RGD PMID:17325137 PMID:20677810 NCBI chr  X:33,962,440...33,992,203
Ensembl chr  X:33,963,657...33,992,115 		JBrowse link
G Scarb1 scavenger receptor class B, member 1 enables TAS
IDA		 PMID:12016218 RGD
BHF-UCL		 PMID:10026214 PMID:12016218 PMID:12016218 RGD:1304217, RGD:1304245, RGD:1304245 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647 		JBrowse link
G Scarb2 scavenger receptor class B, member 2 enables IEA
ISO		 GO_REF:0000107
(PMID:29199275)		 Ensembl
RGD		 PMID:29199275 GO_REF:0000107 NCBI chr14:15,558,271...15,609,813
Ensembl chr14:15,558,236...15,609,813 		JBrowse link
G Sestd1 SEC14 and spectrin domain containing 1 NOT|enables ISO (PMID:20164195) RGD PMID:20164195 NCBI chr 3:62,123,590...62,220,759
Ensembl chr 3:62,129,887...62,220,546 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 enables IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:21550973)		 Ensembl
UniProt
RGD		 PMID:21550973 GO_REF:0000024 GO_REF:0000107 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749 		JBrowse link
G Syt1 synaptotagmin 1 enables IDA PMID:20688915
PMID:12860971		 RGD
ParkinsonsUK-UCL		 PMID:18508778 PMID:20688915 PMID:12860971 RGD:7241021, RGD:11535104, RGD:11079189 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803 		JBrowse link
G Syt10 synaptotagmin 10 enables ISO (PMID:12860971) RGD PMID:12860971 NCBI chr 7:120,857,698...120,920,863
Ensembl chr 7:120,862,972...120,920,863 		JBrowse link
G Syt2 synaptotagmin 2 enables ISO (PMID:12860971) RGD PMID:12860971 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859 		JBrowse link
G Syt3 synaptotagmin 3 enables IDA PMID:12860971 RGD
ParkinsonsUK-UCL		 PMID:18508778 PMID:12860971 RGD:7241021, RGD:11079189 NCBI chr 1:94,880,835...94,895,518
Ensembl chr 1:94,881,247...94,895,246 		JBrowse link
G Syt4 synaptotagmin 4 NOT|enables IDA PMID:20688915 RGD
ParkinsonsUK-UCL		 PMID:18508778 PMID:20688915 RGD:7241021, RGD:11535104 NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332 		JBrowse link
G Syt5 synaptotagmin 5 enables ISO (PMID:12860971) RGD PMID:12860971 NCBI chr 1:69,277,351...69,285,071
Ensembl chr 1:69,277,351...69,285,067 		JBrowse link
G Syt6 synaptotagmin 6 enables ISO (PMID:12860971) RGD PMID:12860971 NCBI chr 2:191,093,009...191,152,283
Ensembl chr 2:191,093,007...191,149,956 		JBrowse link
G Syt7 synaptotagmin 7 enables ISO (PMID:12860971) RGD PMID:12860971 NCBI chr 1:207,031,359...207,093,787
Ensembl chr 1:207,031,592...207,089,026 		JBrowse link
G Syt9 synaptotagmin 9 enables IEA
ISO		 GO_REF:0000107
(PMID:12860971)		 Ensembl
RGD		 PMID:12860971 GO_REF:0000107 NCBI chr 1:161,275,882...161,456,384
Ensembl chr 1:161,275,734...161,455,007 		JBrowse link
G Sytl2 synaptotagmin-like 2 enables ISO (PMID:17182843) RGD PMID:17182843 NCBI chr 1:144,272,870...144,379,310
Ensembl chr 1:144,273,360...144,379,222 		JBrowse link
G Thbs1 thrombospondin 1 enables ISO (PMID:18940719) RGD PMID:18940719 NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440 		JBrowse link
G Timd2 T-cell immunoglobulin and mucin domain containing 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:31,060,308...31,101,262
Ensembl chr10:31,060,326...31,094,623 		JBrowse link
G Timd4 T-cell immunoglobulin and mucin domain containing 4 enables IBA
ISO		 GO_REF:0000033
(PMID:13886198)		 GO_Central
RGD		 PMID:13886198 GO_REF:0000033 NCBI chr10:31,185,751...31,221,843
Ensembl chr10:31,185,731...31,220,966 		JBrowse link
G Tln1 talin 1 enables ISO (PMID:20150896) RGD PMID:20150896 NCBI chr 5:57,787,670...57,817,900
Ensembl chr 5:57,787,943...57,817,900 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 enables ISO (PMID:31101881), (PMID:31902528) RGD PMID:31101881 PMID:31902528 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
G Trim72 tripartite motif containing 72 enables ISS
ISO		 GO_REF:0000024
(PMID:19043407)		 UniProt
RGD		 PMID:19043407 GO_REF:0000024 NCBI chr 1:182,613,753...182,621,613
Ensembl chr 1:182,613,712...182,621,606 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21086
    binding 18096
      modified amino acid binding 113
        phosphatidylserine binding 73
Path 2
Term Annotations click to browse term
  molecular_function 21086
    binding 18096
      lipid binding 896
        phospholipid binding 512
          phosphatidylserine binding 73
paths to the root