ONTOLOGY REPORT - ANNOTATIONS |
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Term: | photoreceptor outer segment |
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Accession: | GO:0001750
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browse the term
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Definition: | The outer segment of a vertebrate photoreceptor that contains a stack of membrane discs embedded with photoreceptor proteins. |
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Abca4 |
ATP binding cassette subfamily A member 4 |
located_in |
ISO |
(PMID:23943788), (PMID:9202155) |
RGD |
PMID:9202155 PMID:23943788 |
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NCBI chr 2:210,164,813...210,302,069
Ensembl chr 2:210,164,813...210,302,069
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Ahi1 |
Abelson helper integration site 1 |
located_in |
ISO |
(PMID:20592197) |
RGD |
PMID:20592197 |
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NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041
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Arr3 |
arrestin 3 |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:10725384), (PMID:12486395) |
Ensembl RGD |
PMID:10725384 PMID:12486395 |
GO_REF:0000107 |
NCBI chr X:65,699,881...65,712,224
Ensembl chr X:65,698,699...65,712,153
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Bbs4 |
Bardet-Biedl syndrome 4 |
located_in |
ISO |
(PMID:23943788) |
RGD |
PMID:23943788 |
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NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
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Bbs7 |
Bardet-Biedl syndrome 7 |
located_in |
ISO |
(PMID:23943788) |
RGD |
PMID:23943788 |
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NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396
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Bsg |
basigin |
located_in |
ISS ISO |
GO_REF:0000024 (PMID:25957687) |
UniProt RGD |
PMID:25957687 |
GO_REF:0000024 |
NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387
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Cacna1f |
calcium voltage-gated channel subunit alpha1 F |
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IDA |
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RGD |
PMID:11526344 |
RGD:632484 |
NCBI chr X:14,868,096...14,896,413
Ensembl chr X:14,868,024...14,896,413
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Cep250 |
centrosomal protein 250 |
located_in |
ISO |
(PMID:28005958) |
RGD |
PMID:28005958 |
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NCBI chr 3:144,470,946...144,516,125
Ensembl chr 3:144,471,214...144,516,125
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Cep290 |
centrosomal protein 290 |
located_in |
ISO |
(PMID:23943788) |
RGD |
PMID:23943788 |
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NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392
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Cerkl |
ceramide kinase-like |
located_in |
ISO |
(PMID:23142158) |
RGD |
PMID:23142158 |
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NCBI chr 3:64,238,714...64,344,695
Ensembl chr 3:64,237,522...64,340,675
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Cfap410 |
cilia and flagella associated protein 410 |
located_in |
ISO |
(PMID:27548899) |
RGD |
PMID:27548899 |
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NCBI chr20:10,687,863...10,694,736
Ensembl chr20:10,687,863...10,694,737
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Cib2 |
calcium and integrin binding family member 2 |
located_in |
ISS ISO |
GO_REF:0000024 (PMID:23023331) |
UniProt RGD |
PMID:23023331 |
GO_REF:0000024 |
NCBI chr 8:54,930,265...54,947,157
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Cnga1 |
cyclic nucleotide gated channel subunit alpha 1 |
located_in |
ISO |
(PMID:10725384), (PMID:15634774), (PMID:20592197) |
RGD |
PMID:10725384 PMID:15634774 PMID:20592197 |
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NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065
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Cnga3 |
cyclic nucleotide gated channel subunit alpha 3 |
located_in |
ISO |
(PMID:15634774) |
RGD |
PMID:15634774 |
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NCBI chr 9:39,447,534...39,494,044
Ensembl chr 9:39,448,034...39,493,183
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Cngb1 |
cyclic nucleotide gated channel subunit beta 1 |
is_active_in located_in |
IBA ISO |
GO_REF:0000033 (PMID:22183407) |
GO_Central RGD |
PMID:22183407 |
GO_REF:0000033 |
NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173
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Cngb3 |
cyclic nucleotide gated channel subunit beta 3 |
is_active_in located_in |
IBA ISO |
GO_REF:0000033 (PMID:15634774) |
GO_Central RGD |
PMID:15634774 |
GO_REF:0000033 |
NCBI chr 5:32,746,988...32,995,121
Ensembl chr 5:32,746,988...32,995,121
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Crb1 |
crumbs cell polarity complex component 1 |
located_in |
ISO |
(PMID:15316081) |
RGD |
PMID:15316081 |
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NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261
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Gnat1 |
G protein subunit alpha transducin 1 |
located_in |
IDA ISO |
(PMID:18367617), (PMID:20592197), (PMID:31696965) (PMID:2534964) |
RGD |
PMID:2534964 PMID:18367617 PMID:20592197 PMID:31696965 PMID:11931744 PMID:10396627 More...
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RGD:1599009, RGD:6893629 |
NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671
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Gnat2 |
G protein subunit alpha transducin 2 |
is_active_in located_in |
IDA IBA ISO |
GO_REF:0000033 (PMID:2534964) |
GO_Central RGD |
PMID:2534964 PMID:17591908 |
GO_REF:0000033, RGD:2302146 |
NCBI chr 2:195,726,371...195,735,866
Ensembl chr 2:195,726,762...195,735,866
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Gnat3 |
G protein subunit alpha transducin 3 |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 4:17,162,500...17,212,283
Ensembl chr 4:17,162,490...17,212,283
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Gnb1 |
G protein subunit beta 1 |
located_in |
ISO |
(PMID:18367617) |
RGD |
PMID:18367617 |
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NCBI chr 5:166,075,508...166,142,223
Ensembl chr 5:166,075,629...166,142,124
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Gngt1 |
G protein subunit gamma transducin 1 |
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IDA |
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RGD |
PMID:11931744 PMID:10396627 |
RGD:1599009, RGD:6893629 |
NCBI chr 4:32,006,267...32,009,252
Ensembl chr 4:32,006,267...32,009,252
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Grk1 |
G protein-coupled receptor kinase 1 |
located_in |
ISO |
(PMID:22183407) |
RGD |
PMID:22183407 |
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NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792
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Guca1a |
guanylate cyclase activator 1A |
located_in |
IDA ISO |
(PMID:22183407) |
RGD |
PMID:22183407 PMID:9620085 |
RGD:1599354 |
NCBI chr 9:13,588,988...13,598,566
Ensembl chr 9:13,588,525...13,598,565
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Guca1b |
guanylate cyclase activator 1B |
located_in |
IDA ISO |
(PMID:22183407) |
RGD |
PMID:22183407 PMID:9620085 |
RGD:1599354 |
NCBI chr 9:13,599,619...13,607,455
Ensembl chr 9:13,599,619...13,607,455
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Gucy2e |
guanylate cyclase 2E |
located_in |
ISO |
(PMID:7912093) |
RGD |
PMID:7912093 |
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NCBI chr10:53,954,918...53,975,576
Ensembl chr10:53,959,010...53,974,067
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Hnf1a |
HNF1 homeobox A |
located_in |
ISO |
MGI:96770 (PMID:10090727) |
RGD |
PMID:10090727 |
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NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
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Ift20 |
intraflagellar transport 20 |
located_in |
ISO |
(PMID:21307337) |
RGD |
PMID:21307337 |
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NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
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Impg1 |
interphotoreceptor matrix proteoglycan 1 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 8:81,243,624...81,389,722
Ensembl chr 8:81,243,624...81,389,722
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Impg2 |
interphotoreceptor matrix proteoglycan 2 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr11:44,318,836...44,418,382
Ensembl chr11:44,318,836...44,418,382
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Inha |
inhibin subunit alpha |
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IDA |
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RGD |
PMID:7596220 |
RGD:2290440 |
NCBI chr 9:76,994,465...76,997,366
Ensembl chr 9:76,993,589...76,997,248
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Iqcb1 |
IQ motif containing B1 |
located_in |
ISO |
(PMID:15723066) |
RGD |
PMID:15723066 |
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NCBI chr11:63,905,595...63,960,141
Ensembl chr11:63,905,590...63,960,093
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Kif17 |
kinesin family member 17 |
located_in |
ISO |
(PMID:19384852) |
RGD |
PMID:19384852 |
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NCBI chr 5:150,482,288...150,521,471
Ensembl chr 5:150,481,578...150,519,638
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Kifap3 |
kinesin-associated protein 3 |
located_in |
ISO |
(PMID:19384852) |
RGD |
PMID:19384852 |
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NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650
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Lyar |
Ly1 antibody reactive |
located_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:25735755) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:25735755 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr14:72,576,878...72,590,854
Ensembl chr14:72,576,879...72,590,612
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Magi2 |
membrane associated guanylate kinase, WW and PDZ domain containing 2 |
located_in |
ISS ISO |
GO_REF:0000024 (PMID:24608321) |
UniProt RGD |
PMID:24608321 |
GO_REF:0000024 |
NCBI chr 4:14,386,389...15,870,036
Ensembl chr 4:14,386,399...15,870,240
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Mak |
male germ cell-associated kinase |
located_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:21148103) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:21148103 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr17:23,683,753...23,731,125
Ensembl chr17:23,693,878...23,730,001
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Map1a |
microtubule-associated protein 1A |
located_in |
ISO |
(PMID:24664738) |
RGD |
PMID:24664738 |
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NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899
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Map1b |
microtubule-associated protein 1B |
located_in |
ISO |
(PMID:24664738) |
RGD |
PMID:24664738 |
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NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
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Mertk |
MER proto-oncogene, tyrosine kinase |
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IDA |
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RGD |
PMID:11861639 |
RGD:1299193 |
NCBI chr 3:115,939,351...116,045,141
Ensembl chr 3:115,939,351...116,046,554
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Myo3b |
myosin IIIB |
located_in |
ISO |
(PMID:19332056) |
RGD |
PMID:19332056 |
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NCBI chr 3:54,820,225...55,228,518
Ensembl chr 3:54,820,251...55,227,373
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Myo5a |
myosin VA |
located_in |
ISO |
(PMID:14978221) |
RGD |
PMID:14978221 |
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NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918
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Myo7a |
myosin VIIA |
located_in NOT|located_in |
ISO |
(PMID:8842737) |
RGD |
PMID:8842737 |
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NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
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Myrip |
myosin VIIA and Rab interacting protein |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:11964381) |
Ensembl RGD |
PMID:11964381 |
GO_REF:0000107 |
NCBI chr 8:120,017,749...120,184,821
Ensembl chr 8:120,017,524...120,183,833
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Nup42 |
nucleoporin 42 |
located_in |
ISO |
(PMID:22183407) |
RGD |
PMID:22183407 |
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NCBI chr 4:10,985,554...11,002,591
Ensembl chr 4:10,985,554...11,002,591
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Ocrl |
OCRL, inositol polyphosphate-5-phosphatase |
located_in |
ISO IEA |
(PMID:22543976) GO_REF:0000107 |
RGD Ensembl |
PMID:22543976 |
GO_REF:0000107 |
NCBI chr X:127,089,508...127,140,362
Ensembl chr X:127,089,590...127,140,362
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Opn1mw |
opsin 1, medium wave sensitive |
located_in is_active_in |
IDA ISO IBA |
(PMID:10725384), (PMID:12651948), (PMID:19332056), (PMID:23351594), (PMID:23386608) GO_REF:0000033 |
RGD GO_Central |
PMID:10725384 PMID:12651948 PMID:19332056 PMID:23351594 PMID:23386608 PMID:20209167 More...
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GO_REF:0000033, RGD:6893562 |
NCBI chr X:151,905,056...151,925,419
Ensembl chr X:151,905,096...151,925,388
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Opn1sw |
opsin 1, short wave sensitive |
located_in is_active_in |
IDA ISO IBA |
(PMID:10725384), (PMID:12651948), (PMID:19332056), (PMID:22183407), (PMID:23351594), (PMID:23386608), (PMID:26420485) GO_REF:0000033 |
RGD GO_Central |
PMID:10725384 PMID:12651948 PMID:19332056 PMID:22183407 PMID:23351594 PMID:23386608 PMID:26420485 PMID:20209167 More...
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GO_REF:0000033, RGD:6893562 |
NCBI chr 4:57,977,317...57,980,457
Ensembl chr 4:57,977,313...57,980,457
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Opn3 |
opsin 3 |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr13:87,589,333...87,619,847
Ensembl chr13:87,589,333...87,619,847
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Pcare |
photoreceptor cilium actin regulator |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 6:23,749,700...23,758,424
Ensembl chr 6:23,749,757...23,758,169
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Pcdh15 |
protocadherin related 15 |
located_in |
ISO |
(PMID:14570705) |
RGD |
PMID:14570705 |
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NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
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Pdc |
phosducin |
is_active_in located_in |
IBA ISO |
GO_REF:0000033 (PMID:18367617) |
GO_Central RGD |
PMID:18367617 |
GO_REF:0000033 |
NCBI chr13:62,297,281...62,371,754
Ensembl chr13:62,358,196...62,371,754
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Pde6b |
phosphodiesterase 6B |
located_in |
ISO |
(PMID:22183407) |
RGD |
PMID:22183407 |
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NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450
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Pex6 |
peroxisomal biogenesis factor 6 |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303
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Pip4k2a |
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029
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Prcd |
photoreceptor disc component |
located_in |
ISO |
(PMID:23672200) |
RGD |
PMID:23672200 |
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NCBI chr10:101,887,192...101,907,647
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Prom1 |
prominin 1 |
located_in |
ISO |
(PMID:19228982) |
RGD |
PMID:19228982 |
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NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
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Prph |
peripherin |
located_in |
ISO |
(PMID:22183407) |
RGD |
PMID:22183407 |
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NCBI chr 7:130,218,149...130,222,136
Ensembl chr 7:130,218,357...130,222,136
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Prph2 |
peripherin 2 |
located_in |
ISO |
(PMID:22183407), (PMID:26420485), (PMID:28053051) |
RGD |
PMID:22183407 PMID:26420485 PMID:28053051 |
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NCBI chr 9:14,066,149...14,081,454
Ensembl chr 9:14,066,156...14,081,454
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Ptgs1 |
prostaglandin-endoperoxide synthase 1 |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:12355421) |
Ensembl RGD |
PMID:12355421 |
GO_REF:0000107 |
NCBI chr 3:19,584,015...19,605,589
Ensembl chr 3:19,584,015...19,605,586
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Ptprk |
protein tyrosine phosphatase, receptor type, K |
located_in |
ISO |
(PMID:18308476) |
RGD |
PMID:18308476 |
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NCBI chr 1:16,738,896...17,236,687
Ensembl chr 1:16,850,576...17,103,605
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Rab27a |
RAB27A, member RAS oncogene family |
located_in |
ISO |
(PMID:11964381) |
RGD |
PMID:11964381 |
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NCBI chr 8:73,782,730...73,836,630
Ensembl chr 8:73,782,694...73,847,829
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Rapgef4 |
Rap guanine nucleotide exchange factor 4 |
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IDA |
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RGD |
PMID:19883736 |
RGD:2314691 |
NCBI chr 3:56,809,388...57,101,332
Ensembl chr 3:56,809,270...57,102,316
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Rd3 |
RD3 regulator of GUCY2D |
located_in |
ISO |
(PMID:29515371) |
RGD |
PMID:29515371 |
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NCBI chr13:103,551,823...103,562,925
Ensembl chr13:103,552,857...103,562,622
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Rho |
rhodopsin |
located_in is_active_in |
IDA ISO IBA |
(PMID:10725384), (PMID:12651948), (PMID:20592197), (PMID:21212183), (PMID:22183407), (PMID:22869374), (PMID:23351594), (PMID:23943788), (PMID:25224828), (PMID:26420485) GO_REF:0000033 (PMID:11767049), (PMID:23704327) |
RGD GO_Central |
PMID:10725384 PMID:11767049 PMID:12651948 PMID:20592197 PMID:21212183 PMID:22183407 PMID:22869374 PMID:23351594 PMID:23704327 PMID:23943788 PMID:25224828 PMID:26420485 PMID:8814134 More...
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GO_REF:0000033, RGD:6893595 |
NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
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Rom1 |
retinal outer segment membrane protein 1 |
located_in |
ISO |
(PMID:20592197), (PMID:22183407), (PMID:26420485) |
RGD |
PMID:20592197 PMID:22183407 PMID:26420485 |
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NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175
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Rp1 |
RP1, axonemal microtubule associated |
located_in |
ISO |
(PMID:14507858), (PMID:15269252) |
RGD |
PMID:14507858 PMID:15269252 |
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NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363
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Rp1l1 |
RP1 like 1 |
located_in |
ISO |
(PMID:19657028) |
RGD |
PMID:19657028 |
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NCBI chr15:38,259,907...38,271,269
Ensembl chr15:38,259,928...38,270,316
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G |
Rpgr |
retinitis pigmentosa GTPase regulator |
located_in |
ISO |
(PMID:12140192) |
RGD |
PMID:12140192 |
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NCBI chr X:12,566,447...12,628,171
Ensembl chr X:12,566,645...12,747,882
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G |
Rrh |
retinal pigment epithelium derived rhodopsin homolog |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 2:218,362,195...218,374,387
Ensembl chr 2:218,362,200...218,374,599
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G |
Sag |
S-antigen visual arrestin |
is_active_in located_in |
IDA IBA ISO IEA |
GO_REF:0000033 (PMID:22869374) GO_REF:0000107 (PMID:3720866) |
GO_Central RGD Ensembl |
PMID:3720866 PMID:22869374 PMID:10396627 |
GO_REF:0000033 GO_REF:0000107, RGD:6893629 |
NCBI chr 9:88,467,797...88,508,821
Ensembl chr 9:88,469,376...88,508,820
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G |
Shank2 |
SH3 and multiple ankyrin repeat domains 2 |
located_in |
ISS ISO |
GO_REF:0000024 (PMID:19299912) |
BHF-UCL RGD |
PMID:19299912 |
GO_REF:0000024 |
NCBI chr 1:199,146,210...199,590,962
Ensembl chr 1:199,169,429...199,589,394
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G |
Stx3 |
syntaxin 3 |
located_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:33974130) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:33974130 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:208,617,018...208,686,240
Ensembl chr 1:208,639,115...208,685,805
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G |
Tmem30a |
transmembrane protein 30A |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 8:80,728,749...80,757,197
Ensembl chr 8:80,729,619...80,753,248
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G |
Tulp1 |
TUB like protein 1 |
located_in |
ISO |
(PMID:19218615) |
RGD |
PMID:19218615 |
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NCBI chr20:6,412,170...6,424,103
Ensembl chr20:6,412,171...6,424,073
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G |
Ush1c |
USH1 protein network component harmonin |
located_in |
IDA ISO |
(PMID:14578428), (PMID:17906286) |
RGD |
PMID:14578428 PMID:17906286 PMID:14578428 |
RGD:1303964 |
NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
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G |
Vcan |
versican |
located_in |
IEA |
GO_REF:0000044 |
UniProt |
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GO_REF:0000044 |
NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637
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G |
Cnga3 |
cyclic nucleotide gated channel subunit alpha 3 |
located_in |
ISO |
(PMID:10813773) |
RGD |
PMID:10813773 |
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NCBI chr 9:39,447,534...39,494,044
Ensembl chr 9:39,448,034...39,493,183
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G |
Guca1a |
guanylate cyclase activator 1A |
located_in is_active_in |
ISO IBA |
(PMID:9620085) GO_REF:0000033 |
RGD GO_Central |
PMID:9620085 |
GO_REF:0000033 |
NCBI chr 9:13,588,988...13,598,566
Ensembl chr 9:13,588,525...13,598,565
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G |
Guca1b |
guanylate cyclase activator 1B |
located_in is_active_in |
ISO IBA |
(PMID:9620085) GO_REF:0000033 |
RGD GO_Central |
PMID:9620085 |
GO_REF:0000033 |
NCBI chr 9:13,599,619...13,607,455
Ensembl chr 9:13,599,619...13,607,455
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G |
Ift140 |
intraflagellar transport 140 |
located_in |
ISO |
(PMID:24619649) |
RGD |
PMID:24619649 |
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NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433
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G |
Opn1sw |
opsin 1, short wave sensitive |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:10813773) |
Ensembl RGD |
PMID:10813773 |
GO_REF:0000107 |
NCBI chr 4:57,977,317...57,980,457
Ensembl chr 4:57,977,313...57,980,457
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G |
Pcare |
photoreceptor cilium actin regulator |
located_in |
ISO |
(PMID:25616964) |
RGD |
PMID:25616964 |
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NCBI chr 6:23,749,700...23,758,424
Ensembl chr 6:23,749,757...23,758,169
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G |
Prkca |
protein kinase C, alpha |
located_in |
ISO |
(PMID:10813773) |
RGD |
PMID:10813773 |
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NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
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G |
Rd3 |
RD3 regulator of GUCY2D |
located_in |
ISO |
(PMID:21078983) |
RGD |
PMID:21078983 |
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NCBI chr13:103,551,823...103,562,925
Ensembl chr13:103,552,857...103,562,622
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G |
Slc24a4 |
solute carrier family 24 member 4 |
located_in |
ISO |
(PMID:28650316) |
RGD |
PMID:28650316 |
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NCBI chr 6:121,279,590...121,419,811
Ensembl chr 6:121,280,031...121,414,949
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G |
Tmem237 |
transmembrane protein 237 |
located_in |
ISO |
(PMID:20375344) |
RGD |
PMID:20375344 |
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NCBI chr 9:60,533,348...60,569,253
Ensembl chr 9:60,535,233...60,572,567
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G |
AC131360.2 |
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located_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
Ensembl chr18:29,185,443...29,187,845
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G |
Rho |
rhodopsin |
located_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:25664179) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:25664179 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
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G |
Sptbn5 |
spectrin, beta, non-erythrocytic 5 |
located_in |
ISO |
(PMID:23704327) |
RGD |
PMID:23704327 |
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NCBI chr 3:107,013,783...107,054,878
Ensembl chr 3:107,013,265...107,054,324
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G |
Cdhr1 |
cadherin-related family member 1 |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:18654668) |
Ensembl RGD |
PMID:18654668 |
GO_REF:0000107 |
NCBI chr16:12,843,436...12,863,321
Ensembl chr16:12,843,437...12,863,396
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G |
Cnga1 |
cyclic nucleotide gated channel subunit alpha 1 |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:18654668) |
Ensembl RGD |
PMID:18654668 |
GO_REF:0000107 |
NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065
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G |
Gnb1 |
G protein subunit beta 1 |
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IDA |
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RGD |
PMID:11931744 |
RGD:1599009 |
NCBI chr 5:166,075,508...166,142,223
Ensembl chr 5:166,075,629...166,142,124
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G |
Gucy2e |
guanylate cyclase 2E |
located_in |
IEA ISO IDA |
GO_REF:0000107 (PMID:21598940) PMID:9153227 |
Ensembl RGD |
PMID:21598940 PMID:9153227 |
GO_REF:0000107, RGD:1599625 |
NCBI chr10:53,954,918...53,975,576
Ensembl chr10:53,959,010...53,974,067
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G |
Pde6a |
phosphodiesterase 6A |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr18:54,676,863...54,748,640
Ensembl chr18:54,676,863...54,748,816
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G |
Pde6b |
phosphodiesterase 6B |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450
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G |
Pde6g |
phosphodiesterase 6G |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr10:105,721,502...105,726,150
Ensembl chr10:105,721,682...105,726,719
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G |
Pde6h |
phosphodiesterase 6H |
is_active_in |
IBA |
GO_REF:0000033 |
GO_Central |
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GO_REF:0000033 |
NCBI chr 4:169,857,793...169,872,969
Ensembl chr 4:169,857,812...169,872,969
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G |
Phlpp2 |
PH domain and leucine rich repeat protein phosphatase 2 |
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IDA |
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RGD |
PMID:20089132 |
RGD:5131540 |
NCBI chr19:37,835,125...37,901,804
Ensembl chr19:37,835,125...37,905,513
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G |
Prcd |
photoreceptor disc component |
located_in |
ISO |
(PMID:27613864) (PMID:27509380), (PMID:27613864) |
RGD |
PMID:27509380 PMID:27613864 |
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NCBI chr10:101,887,192...101,907,647
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G |
Prom1 |
prominin 1 |
located_in |
ISO |
(PMID:18654668) |
RGD |
PMID:18654668 |
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NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
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G |
Prph |
peripherin |
located_in |
ISO |
(PMID:10414956) |
RGD |
PMID:10414956 |
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NCBI chr 7:130,218,149...130,222,136
Ensembl chr 7:130,218,357...130,222,136
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G |
Rdh11 |
retinol dehydrogenase 11 |
NOT|located_in |
ISO |
(PMID:15790565) |
RGD |
PMID:15790565 |
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NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252
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G |
Rho |
rhodopsin |
located_in |
IDA IEA ISO ISS |
GO_REF:0000107 (PMID:19934218) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:19934218 PMID:2209754 |
GO_REF:0000024 GO_REF:0000107, RGD:6893561 |
NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
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G |
Rom1 |
retinal outer segment membrane protein 1 |
located_in |
ISO |
(PMID:18654668) |
RGD |
PMID:18654668 |
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NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175
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G |
Atp1a4 |
ATPase Na+/K+ transporting subunit alpha 4 |
located_in |
ISO IEA |
(PMID:26373354) GO_REF:0000107 |
RGD Ensembl |
PMID:26373354 |
GO_REF:0000107 |
NCBI chr13:84,683,766...84,719,790
Ensembl chr13:84,683,768...84,719,687
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G |
Cep290 |
centrosomal protein 290 |
is_active_in |
ISO |
MGI:2144877 (PMID:29899041) |
RGD |
PMID:29899041 |
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NCBI chr 7:35,310,071...35,399,388
Ensembl chr 7:35,310,199...35,399,392
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G |
Cnga1 |
cyclic nucleotide gated channel subunit alpha 1 |
located_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:22802073) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:22802073 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065
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G |
Cngb1 |
cyclic nucleotide gated channel subunit beta 1 |
located_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173
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G |
Gucy2f |
guanylate cyclase 2F |
located_in |
ISS ISO |
GO_REF:0000024 (PMID:21078983) |
UniProt RGD |
PMID:21078983 |
GO_REF:0000024 |
NCBI chr X:105,710,356...105,808,183
Ensembl chr X:105,710,356...105,808,183
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G |
Rd3 |
RD3 regulator of GUCY2D |
located_in |
ISO |
(PMID:21078983) |
RGD |
PMID:21078983 |
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NCBI chr13:103,551,823...103,562,925
Ensembl chr13:103,552,857...103,562,622
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G |
Rgs9bp |
regulator of G protein signaling 9 binding protein |
located_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr 1:88,249,438...88,250,151
Ensembl chr 1:88,249,438...88,250,151
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G |
Rho |
rhodopsin |
located_in |
IEA ISO |
GO_REF:0000107 (PMID:19332056), (PMID:21444805), (PMID:23178122) |
Ensembl RGD |
PMID:19332056 PMID:21444805 PMID:23178122 |
GO_REF:0000107 |
NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
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G |
Spata7 |
spermatogenesis associated 7 |
located_in is_active_in |
IEA IBA ISO |
GO_REF:0000107 GO_REF:0000033 MGI:2384917|MGI:5660490 (PMID:29899041) |
Ensembl GO_Central RGD |
PMID:29899041 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 6:117,879,828...117,925,284
Ensembl chr 6:117,879,823...117,925,284
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G |
Tmem237 |
transmembrane protein 237 |
located_in |
ISO |
(PMID:20375344) |
RGD |
PMID:20375344 |
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NCBI chr 9:60,533,348...60,569,253
Ensembl chr 9:60,535,233...60,572,567
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Term paths to the root
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