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ONTOLOGY REPORT - ANNOTATIONS


Term:establishment of planar polarity
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Accession:GO:0001736 term browser browse the term
Definition:Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates.
Synonyms:narrow_synonym: establishment of planar cell polarity



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establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALMS1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:21071598) MGI PMID:21071598 NCBI chr 3:69,253,742...69,417,043
Ensembl chr 3:69,253,750...69,417,189
JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25877302) Ensembl
MGI
PMID:25877302 GO_REF:0000107 NCBI chr16:22,381,001...22,501,052
Ensembl chr16:22,380,326...22,500,998
JBrowse link
G DLG3 discs large MAGUK scaffold protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21920314) Ensembl
MGI
PMID:21920314 GO_REF:0000107 NCBI chr  X:56,471,941...56,531,481
Ensembl chr  X:56,472,307...56,527,983
JBrowse link
G EXOC5 exocyst complex component 5 involved_in
acts_upstream_of_or_within_positive_effect
IEA
ISO
(PMID:26040895) Ensembl
MGI
PMID:26040895 GO_REF:0000107 NCBI chr 1:186,376,134...186,430,206
Ensembl chr 1:186,377,458...186,529,728
JBrowse link
G FUZ fuzzy planar cell polarity protein involved_in ISO (MGI:4438317|PMID:19767740) UniProt PMID:19767740 MGI:4438317 NCBI chr 6:54,823,680...54,830,425
Ensembl chr 6:54,823,668...54,829,506
JBrowse link
G FZD3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16495441) Ensembl
MGI
PMID:16495441 GO_REF:0000107 NCBI chr14:12,281,127...12,394,768
Ensembl chr14:12,281,155...12,390,530
JBrowse link
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16495441) Ensembl
MGI
PMID:16495441 GO_REF:0000107 NCBI chr 4:33,811,159...33,844,556
Ensembl chr 4:33,809,809...33,844,656
JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20643356) Ensembl
MGI
PMID:20643356 GO_REF:0000107 NCBI chr 6:82,014,022...82,050,240
Ensembl chr 6:82,013,969...82,050,236
JBrowse link
G IFT20 intraflagellar transport 20 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25605782) Ensembl
MGI
PMID:25605782 GO_REF:0000107 NCBI chr12:44,609,586...44,616,685
Ensembl chr12:44,609,508...44,616,655
JBrowse link
G INTU inturned planar cell polarity protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:97,123,062...97,204,659
Ensembl chr 8:97,123,065...97,204,650
JBrowse link
G LOC102159820 cadherin EGF LAG seven-pass G-type receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:3,114,410...3,203,378
Ensembl chr 5:2,980,351...3,203,381
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20704721) Ensembl
MGI
PMID:20704721 GO_REF:0000107 NCBI chr 7:38,135,675...38,205,662
Ensembl chr 7:38,135,655...38,205,655
JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22927466) Ensembl
MGI
PMID:22927466 GO_REF:0000107 NCBI chr 6:31,564,937...31,660,540
Ensembl chr 6:31,564,986...31,661,190
JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14729569) Ensembl
MGI
PMID:14729569 GO_REF:0000107 NCBI chr13:127,115,990...127,347,082
Ensembl chr13:127,116,105...127,347,068
JBrowse link
G TTC8 tetratricopeptide repeat domain 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25605782) Ensembl
MGI
PMID:25605782 GO_REF:0000107 NCBI chr 7:110,731,729...110,783,999
Ensembl chr 7:110,731,731...110,784,853
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:20643356) GO_Central
MGI
TreeGrafter
PMID:20643356 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:90,051,994...90,080,701
Ensembl chr 4:90,051,277...90,080,635
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18953410) Ensembl
MGI
PMID:18953410 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207
JBrowse link
establishment of body hair planar orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASTN2 astrotactin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26418459) Ensembl
MGI
PMID:26418459 GO_REF:0000107 NCBI chr 1:256,825,466...257,740,676
Ensembl chr 1:256,825,486...257,740,977
JBrowse link
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26418459) Ensembl
MGI
PMID:26418459 GO_REF:0000107 NCBI chr 4:33,811,159...33,844,556
Ensembl chr 4:33,809,809...33,844,656
JBrowse link
G LOC102159820 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19357712)
(PMID:18849982)
Ensembl
MGI
PMID:18849982 PMID:19357712 GO_REF:0000107 NCBI chr 5:3,114,410...3,203,378
Ensembl chr 5:2,980,351...3,203,381
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:18849982) MGI PMID:18849982 NCBI chr 4:90,051,994...90,080,701
Ensembl chr 4:90,051,277...90,080,635
JBrowse link
establishment of planar polarity involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22076439) Ensembl
MGI
PMID:22076439 GO_REF:0000107 NCBI chr15:113,966,573...115,096,984
Ensembl chr15:113,974,437...115,096,565
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19543268) Ensembl
MGI
PMID:19543268 GO_REF:0000107 NCBI chr12:17,709,046...17,733,434
Ensembl chr12:17,709,046...17,733,431
JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTHRC1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18606138) Ensembl
MGI
PMID:18606138 GO_REF:0000107 NCBI chr 4:33,759,541...33,771,625
Ensembl chr 4:33,759,542...33,771,582
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:18606138) MGI PMID:18606138 NCBI chr 4:90,051,994...90,080,701
Ensembl chr 4:90,051,277...90,080,635
JBrowse link
establishment of planar polarity of embryonic epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXF2 forkhead box F2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16439479) Ensembl
MGI
PMID:16439479 GO_REF:0000107 NCBI chr 7:715,001...719,781
Ensembl chr 7:715,001...720,104
JBrowse link
G LOC102159820 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12842012) Ensembl
MGI
PMID:12842012 GO_REF:0000107 NCBI chr 5:3,114,410...3,203,378
Ensembl chr 5:2,980,351...3,203,381
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,628,816...48,735,834
JBrowse link
establishment of planar polarity of follicular epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WDR1 WD repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:6,413,338...6,452,383
Ensembl chr 8:6,413,347...6,452,346
JBrowse link
microtubule cytoskeleton organization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRSK1 BR serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:59,468,289...59,499,062
Ensembl chr 6:59,468,733...59,499,059
JBrowse link
G BRSK2 BR serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:896,720...953,908
Ensembl chr 2:896,585...953,108
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,567,329...48,735,836
Ensembl chr12:48,628,816...48,735,834
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19056682) MGI PMID:19056682 NCBI chr 5:60,149,041...60,318,719
Ensembl chr 5:60,149,028...60,314,662
JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:16571627) Ensembl
MGI
TreeGrafter
GO_Central
PMID:16571627 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:63,617,787...63,628,965
Ensembl chr 6:63,617,789...63,628,913
JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:16571627) Ensembl
MGI
TreeGrafter
GO_Central
PMID:16571627 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr12:52,581,687...52,590,266
Ensembl chr12:52,581,688...52,590,285
JBrowse link
G DVL3 dishevelled segment polarity protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(PMID:19008950) TreeGrafter
MGI
GO_Central
PMID:19008950 GO_REF:0000033 GO_REF:0000118 NCBI chr13:122,075,851...122,092,975
Ensembl chr13:122,076,003...122,092,971
JBrowse link
G FZD1 frizzled class receptor 1 acts_upstream_of_or_within ISO (PMID:20940229) MGI PMID:20940229 NCBI chr 9:71,346,994...71,356,488
Ensembl chr 9:71,349,988...71,352,104
JBrowse link
G FZD2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20940229) Ensembl
MGI
PMID:20940229 GO_REF:0000107 NCBI chr12:18,740,417...18,742,301
Ensembl chr12:18,740,653...18,742,420
JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20643356) Ensembl
MGI
PMID:20643356 GO_REF:0000107 NCBI chr 6:82,014,022...82,050,240
Ensembl chr 6:82,013,969...82,050,236
JBrowse link
G LOC102159820 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20704721) Ensembl
MGI
PMID:20704721 GO_REF:0000107 NCBI chr 5:3,114,410...3,203,378
Ensembl chr 5:2,980,351...3,203,381
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20704721) Ensembl
MGI
PMID:20704721 GO_REF:0000107 NCBI chr 7:38,135,675...38,205,662
Ensembl chr 7:38,135,655...38,205,655
JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18257070) Ensembl
MGI
PMID:18257070 GO_REF:0000107 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18257070) Ensembl
MGI
PMID:18257070 GO_REF:0000107 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,144...75,345,921
JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (PMID:18257070) MGI PMID:18257070 NCBI chr14:109,120,382...109,125,655
Ensembl chr14:109,119,822...109,125,686
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:19008950)
(PMID:20704721)
(PMID:18257070)
(PMID:16571627)
(PMID:20643356)
(PMID:20940229)
MGI PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 More... NCBI chr 4:90,051,994...90,080,701
Ensembl chr 4:90,051,277...90,080,635
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19056682) Ensembl
MGI
PMID:19056682 GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207
JBrowse link
protein localization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102159820 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18849982) Ensembl
MGI
PMID:18849982 GO_REF:0000107 NCBI chr 5:3,114,410...3,203,378
Ensembl chr 5:2,980,351...3,203,381
JBrowse link
G NPHP1 nephrocystin 1 involved_in IEA
IBA
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr 3:46,316,864...46,378,279
Ensembl chr 3:46,316,875...46,377,273
JBrowse link
regulation of establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JHY junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29211732) Ensembl
MGI
PMID:29211732 GO_REF:0000107 NCBI chr 9:49,826,428...49,887,758
Ensembl chr 9:49,826,501...49,888,860
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,447,354...45,925,141
Ensembl chr 7:45,450,950...45,925,149
JBrowse link
G SAPCD2 suppressor APC domain containing 2 involved_in ISO (MGI:5882149|PMID:26766442) UniProt PMID:26766442 MGI:5882149
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19300477) Ensembl
MGI
PMID:19300477 GO_REF:0000107 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19300477) Ensembl
MGI
PMID:19300477 GO_REF:0000107 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,144...75,345,921
JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (PMID:19300477) MGI PMID:19300477 NCBI chr14:109,120,382...109,125,655
Ensembl chr14:109,119,822...109,125,686
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:19300477) MGI PMID:19300477 NCBI chr 4:90,051,994...90,080,701
Ensembl chr 4:90,051,277...90,080,635
JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19966784) Ensembl
MGI
PMID:19966784 GO_REF:0000107 NCBI chr 8:112,670,529...112,762,870
Ensembl chr 8:112,670,533...112,762,858
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17813
    developmental process 6722
      anatomical structure morphogenesis 2948
        establishment of tissue polarity 41
          establishment of planar polarity 40
            cell-cell adhesion involved in establishment of planar polarity 0
            establishment of body hair or bristle planar orientation + 4
            establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
            establishment of imaginal disc-derived wing hair orientation + 0
            establishment of ommatidial planar polarity + 0
            establishment of planar polarity involved in nephron morphogenesis + 2
            establishment of planar polarity of embryonic epithelium + 18
            establishment of planar polarity of follicular epithelium 1
            establishment of planar polarity of larval imaginal disc epithelium 0
            microtubule cytoskeleton organization involved in establishment of planar polarity + 3
            protein localization involved in establishment of planar polarity 2
            regulation of establishment of planar polarity + 18
Path 2
Term Annotations click to browse term
  biological_process 17813
    developmental process 6722
      anatomical structure development 6316
        tissue development 2231
          tissue morphogenesis 708
            morphogenesis of an epithelium 589
              morphogenesis of a polarized epithelium 68
                establishment of planar polarity 40
                  cell-cell adhesion involved in establishment of planar polarity 0
                  establishment of body hair or bristle planar orientation + 4
                  establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
                  establishment of imaginal disc-derived wing hair orientation + 0
                  establishment of ommatidial planar polarity + 0
                  establishment of planar polarity involved in nephron morphogenesis + 2
                  establishment of planar polarity of embryonic epithelium + 18
                  establishment of planar polarity of follicular epithelium 1
                  establishment of planar polarity of larval imaginal disc epithelium 0
                  microtubule cytoskeleton organization involved in establishment of planar polarity + 3
                  protein localization involved in establishment of planar polarity 2
                  regulation of establishment of planar polarity + 18
paths to the root