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ONTOLOGY REPORT - ANNOTATIONS

Term:establishment of planar polarity
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Accession:GO:0001736 term browser browse the term
Definition:Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates.
Synonyms:narrow_synonym: establishment of planar cell polarity

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establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alms1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:21071598) MGI PMID:21071598 NCBI chrNW_004624762:129,349...268,945
Ensembl chrNW_004624762:128,491...269,006 		JBrowse link
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in ISO (PMID:12842012) UniProt PMID:12842012 NCBI chrNW_004624752:3,426,317...3,537,219
Ensembl chrNW_004624752:3,425,901...3,535,400 		JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO (PMID:25877302) MGI PMID:25877302 NCBI chrNW_004624759:17,763,200...17,879,603
Ensembl chrNW_004624759:17,763,585...17,855,954 		JBrowse link
G Dlg3 discs large MAGUK scaffold protein 3 acts_upstream_of_or_within ISO (PMID:21920314) MGI PMID:21920314 NCBI chrNW_004624903:409,721...473,422
Ensembl chrNW_004624903:409,709...473,659 		JBrowse link
G Exoc5 exocyst complex component 5 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect 		ISO (PMID:26040895) MGI PMID:26040895 NCBI chrNW_004624884:2,239,614...2,311,500
Ensembl chrNW_004624884:2,242,040...2,312,266 		JBrowse link
G Fuz fuzzy planar cell polarity protein involved_in ISO (PMID:19767740) UniProt PMID:19767740 NCBI chrNW_004624832:4,509,118...4,514,180
Ensembl chrNW_004624832:4,509,505...4,514,183 		JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO (PMID:16495441) MGI PMID:16495441 NCBI chrNW_004624758:23,147,512...23,240,711
Ensembl chrNW_004624758:23,147,452...23,230,879 		JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO (PMID:16495441) MGI PMID:16495441 NCBI chrNW_004624763:19,861,837...19,888,626 JBrowse link
G Grhl3 grainyhead like transcription factor 3 acts_upstream_of_or_within ISO (PMID:20643356) MGI PMID:20643356 NCBI chrNW_004624764:8,753,343...8,783,891
Ensembl chrNW_004624764:8,753,567...8,783,162 		JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO (PMID:25605782) MGI PMID:25605782 NCBI chrNW_004624786:928,123...939,515 JBrowse link
G Intu inturned planar cell polarity protein involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624777:8,585,777...8,674,887
Ensembl chrNW_004624777:8,596,178...8,675,295 		JBrowse link
G Ptk7 protein tyrosine kinase 7 (inactive) acts_upstream_of_or_within ISO (PMID:20704721) MGI PMID:20704721 NCBI chrNW_004624754:16,386,437...16,441,341
Ensembl chrNW_004624754:16,386,296...16,440,681 		JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within ISO (PMID:22927466) MGI PMID:22927466 NCBI chrNW_004624757:3,080,162...3,172,750
Ensembl chrNW_004624757:3,079,712...3,172,115 		JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:67,283,444...67,489,808
Ensembl chrNW_004624730:67,286,160...67,489,670 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO (PMID:25605782) MGI PMID:25605782 NCBI chrNW_004624734:13,437,234...13,497,269
Ensembl chrNW_004624734:13,437,221...13,497,510 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:20643356) MGI
Ensembl		 PMID:20643356 GO_REF:0000107 NCBI chrNW_004624794:841,302...867,717
Ensembl chrNW_004624794:841,247...867,708 		JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (PMID:18953410) MGI PMID:18953410 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
establishment of body hair planar orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Astn2 astrotactin 2 acts_upstream_of_or_within ISO (PMID:26418459) MGI PMID:26418459 NCBI chrNW_004624760:17,901,406...18,813,087
Ensembl chrNW_004624760:17,901,406...18,816,820 		JBrowse link
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (PMID:18849982)
(PMID:19357712) 		MGI PMID:18849982 PMID:19357712 NCBI chrNW_004624752:3,426,317...3,537,219
Ensembl chrNW_004624752:3,425,901...3,535,400 		JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO (PMID:26418459) MGI PMID:26418459 NCBI chrNW_004624763:19,861,837...19,888,626 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:841,302...867,717
Ensembl chrNW_004624794:841,247...867,708 		JBrowse link
establishment of planar polarity involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbb4 erb-b2 receptor tyrosine kinase 4 acts_upstream_of_or_within ISO (PMID:22076439) MGI PMID:22076439 NCBI chrNW_004624765:3,612,781...4,742,219
Ensembl chrNW_004624765:3,613,379...4,734,585 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO (PMID:19543268) MGI PMID:19543268 NCBI chrNW_004624849:2,971,658...2,979,864
Ensembl chrNW_004624849:2,957,153...2,976,179 		JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 acts_upstream_of_or_within ISO (PMID:18606138) MGI PMID:18606138 NCBI chrNW_004624763:19,917,199...19,925,824
Ensembl chrNW_004624763:19,917,169...19,925,896 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:841,302...867,717
Ensembl chrNW_004624794:841,247...867,708 		JBrowse link
establishment of planar polarity of embryonic epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (PMID:12842012) MGI PMID:12842012 NCBI chrNW_004624752:3,426,317...3,537,219
Ensembl chrNW_004624752:3,425,901...3,535,400 		JBrowse link
G Foxf2 forkhead box F2 acts_upstream_of_or_within ISO (PMID:16439479) MGI PMID:16439479 NCBI chrNW_004624756:23,209,402...23,213,817
Ensembl chrNW_004624756:23,209,390...23,213,802 		JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (PMID:23533177) CACAO PMID:23533177 NCBI chrNW_004624786:5,223,890...5,306,033
Ensembl chrNW_004624786:5,224,982...5,302,436 		JBrowse link
establishment of planar polarity of follicular epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdr1 WD repeat domain 1 involved_in ISO (PMID:25915128) UniProt PMID:25915128 NCBI chrNW_004624755:21,090,599...21,124,107
Ensembl chrNW_004624755:21,090,717...21,123,259 		JBrowse link
microtubule cytoskeleton organization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk1 BR serine/threonine kinase 1 involved_in ISO (PMID:18268107) ARUK-UCL PMID:18268107 NCBI chrNW_004624832:1,975,448...1,995,102
Ensembl chrNW_004624832:1,975,314...1,995,056 		JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in ISO (PMID:18268107) ARUK-UCL PMID:18268107 NCBI chrNW_004624766:21,296,115...21,334,054
Ensembl chrNW_004624766:21,296,120...21,334,040 		JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (PMID:23533177) CACAO PMID:23533177 NCBI chrNW_004624786:5,223,890...5,306,033
Ensembl chrNW_004624786:5,224,982...5,302,436 		JBrowse link
protein localization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (PMID:18849982) MGI PMID:18849982 NCBI chrNW_004624752:3,426,317...3,537,219
Ensembl chrNW_004624752:3,425,901...3,535,400 		JBrowse link
G Nphp1 nephrocystin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:1,725,515...1,779,787
Ensembl chrNW_004624749:1,725,598...1,779,344 		JBrowse link
regulation of establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jhy junctional cadherin complex regulator acts_upstream_of_or_within ISO (PMID:29211732) MGI PMID:29211732 NCBI chrNW_004624880:2,150,517...2,218,212
Ensembl chrNW_004624880:2,150,314...2,216,660 		JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (PMID:19959710) UniProt PMID:19959710 NCBI chrNW_004624855:4,019,088...4,539,289
Ensembl chrNW_004624855:4,019,056...4,536,324 		JBrowse link
G Sapcd2 suppressor APC domain containing 2 involved_in ISO (PMID:26766442) UniProt PMID:26766442 NCBI chrNW_004624760:843,746...848,104
Ensembl chrNW_004624760:843,760...847,327 		JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (PMID:19300477) MGI PMID:19300477 NCBI chrNW_004624780:2,133,105...2,172,301
Ensembl chrNW_004624780:2,132,960...2,174,508 		JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624858:5,052,736...5,061,495
Ensembl chrNW_004624858:5,052,518...5,061,591 		JBrowse link
G Sfrp5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (PMID:19300477) MGI PMID:19300477 NCBI chrNW_004624737:9,395,589...9,401,600
Ensembl chrNW_004624737:9,395,393...9,401,173 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:841,302...867,717
Ensembl chrNW_004624794:841,247...867,708 		JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (PMID:19966784) MGI PMID:19966784 NCBI chrNW_004624830:268,764...334,660 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17646
    developmental process 6435
      anatomical structure morphogenesis 2794
        establishment of tissue polarity 35
          establishment of planar polarity 34
            cell-cell adhesion involved in establishment of planar polarity 0
            establishment of body hair or bristle planar orientation + 4
            establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
            establishment of imaginal disc-derived wing hair orientation + 0
            establishment of ommatidial planar polarity + 0
            establishment of planar polarity involved in nephron morphogenesis + 2
            establishment of planar polarity of embryonic epithelium + 6
            establishment of planar polarity of follicular epithelium 1
            establishment of planar polarity of larval imaginal disc epithelium 0
            microtubule cytoskeleton organization involved in establishment of planar polarity + 3
            protein localization involved in establishment of planar polarity 2
            regulation of establishment of planar polarity + 8
Path 2
Term Annotations click to browse term
  biological_process 17646
    developmental process 6435
      anatomical structure development 6017
        tissue development 2123
          tissue morphogenesis 669
            morphogenesis of an epithelium 558
              morphogenesis of a polarized epithelium 60
                establishment of planar polarity 34
                  cell-cell adhesion involved in establishment of planar polarity 0
                  establishment of body hair or bristle planar orientation + 4
                  establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
                  establishment of imaginal disc-derived wing hair orientation + 0
                  establishment of ommatidial planar polarity + 0
                  establishment of planar polarity involved in nephron morphogenesis + 2
                  establishment of planar polarity of embryonic epithelium + 6
                  establishment of planar polarity of follicular epithelium 1
                  establishment of planar polarity of larval imaginal disc epithelium 0
                  microtubule cytoskeleton organization involved in establishment of planar polarity + 3
                  protein localization involved in establishment of planar polarity 2
                  regulation of establishment of planar polarity + 8
paths to the root