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ONTOLOGY REPORT - ANNOTATIONS


Term:establishment of planar polarity
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Accession:GO:0001736 term browser browse the term
Definition:Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates.
Synonyms:narrow_synonym: establishment of planar cell polarity


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establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALMS1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (MGI:4867594|PMID:21071598) MGI PMID:21071598 MGI:4867594 NCBI chr14:33,571,894...33,795,404
Ensembl chr14:33,573,296...33,789,549
JBrowse link
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in ISO (MGI:2667273|PMID:12842012) UniProt PMID:12842012 MGI:2667273 NCBI chr19:28,842,332...29,030,672
Ensembl chr19:28,844,644...29,030,216
JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO (MGI:5648689|PMID:25877302) MGI PMID:25877302 MGI:5648689 NCBI chr 4:35,981,299...36,131,575
Ensembl chr 4:35,979,110...36,130,565
JBrowse link
G DLG3 discs large MAGUK scaffold protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5299396|PMID:21920314) MGI
Ensembl
PMID:21920314 GO_REF:0000107 MGI:5299396 NCBI chr  X:60,290,280...60,346,954
Ensembl chr  X:60,290,630...60,346,953
JBrowse link
G EXOC5 exocyst complex component 5 involved_in
acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
IEA
ISO
(PMID:26040895)
(MGI:5699235|PMID:26040895)
Ensembl
MGI
PMID:26040895 GO_REF:0000107 MGI:5699235 NCBI chr24:34,388,155...34,449,832
Ensembl chr24:34,388,119...34,450,442
JBrowse link
G FUZ fuzzy planar cell polarity protein involved_in ISO (MGI:4438317|PMID:19767740) UniProt PMID:19767740 MGI:4438317 NCBI chr 6:42,968,715...42,975,374
Ensembl chr 6:42,969,000...42,975,368
JBrowse link
G FZD3 frizzled class receptor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3616416|PMID:16495441) MGI
Ensembl
PMID:16495441 GO_REF:0000107 MGI:3616416 NCBI chr 8:26,598,544...26,668,983
Ensembl chr 8:26,598,610...26,667,543
JBrowse link
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within ISO (MGI:3616416|PMID:16495441) MGI PMID:16495441 MGI:3616416 NCBI chr 8:98,154,173...98,187,864
Ensembl chr 8:98,154,196...98,188,069
JBrowse link
G GRHL3 grainyhead like transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4819429|PMID:20643356) MGI
Ensembl
PMID:20643356 GO_REF:0000107 MGI:4819429 NCBI chr20:108,338,891...108,375,351
Ensembl chr20:108,330,121...108,361,887
JBrowse link
G IFT20 intraflagellar transport 20 acts_upstream_of_or_within ISO (MGI:5615303|PMID:25605782) MGI PMID:25605782 MGI:5615303 NCBI chr16:22,094,383...22,102,234 JBrowse link
G IFT20 intraflagellar transport 20 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:22,094,003...22,098,452 JBrowse link
G INTU inturned planar cell polarity protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:74,749,929...74,844,078
Ensembl chr 7:74,759,929...74,843,989
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4830023|PMID:20704721) MGI
Ensembl
PMID:20704721 GO_REF:0000107 MGI:4830023 NCBI chr17:29,001,797...29,083,767
Ensembl chr17:29,001,805...29,083,700
JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within ISO (MGI:5449641|PMID:22927466) MGI PMID:22927466 MGI:5449641 NCBI chr 5:39,388,632...39,487,223
Ensembl chr 5:39,387,107...39,487,092
JBrowse link
G TP63 tumor protein p63 acts_upstream_of_or_within ISO (MGI:3027687|PMID:14729569) MGI PMID:14729569 MGI:3027687 NCBI chr15:83,861,489...84,126,675 JBrowse link
G TP63 tumor protein p63 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:84,093,957...84,123,905 JBrowse link
G TTC8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5615303|PMID:25605782) MGI
Ensembl
PMID:25605782 GO_REF:0000107 MGI:5615303 NCBI chr24:66,483,808...66,539,717
Ensembl chr24:66,483,864...66,539,142
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4819429|PMID:20643356) MGI
TreeGrafter
PMID:20643356 GO_REF:0000118 MGI:4819429 NCBI chr20:3,521,066...3,549,301
Ensembl chr20:3,521,060...3,548,718
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within ISO (MGI:3829860|PMID:18953410) MGI PMID:18953410 MGI:3829860 NCBI chr22:16,809,454...16,836,815
Ensembl chr22:16,809,451...16,825,048
JBrowse link
establishment of body hair planar orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASTN2 astrotactin 2 acts_upstream_of_or_within ISO (MGI:5749616|PMID:26418459) MGI PMID:26418459 MGI:5749616 NCBI chr12:22,176,073...23,155,638
Ensembl chr12:22,177,637...23,156,979
JBrowse link
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:3835694|PMID:18849982)
(MGI:4429791|PMID:19357712)
MGI PMID:18849982 PMID:19357712 MGI:3835694 MGI:4429791 NCBI chr19:28,842,332...29,030,672
Ensembl chr19:28,844,644...29,030,216
JBrowse link
G FZD6 frizzled class receptor 6 acts_upstream_of_or_within ISO (MGI:5749616|PMID:26418459) MGI PMID:26418459 MGI:5749616 NCBI chr 8:98,154,173...98,187,864
Ensembl chr 8:98,154,196...98,188,069
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3835694|PMID:18849982) MGI PMID:18849982 MGI:3835694 NCBI chr20:3,521,066...3,549,301
Ensembl chr20:3,521,060...3,548,718
JBrowse link
establishment of planar polarity involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERBB4 erb-b2 receptor tyrosine kinase 4 acts_upstream_of_or_within ISO (MGI:5305530|PMID:22076439) MGI PMID:22076439 MGI:5305530 NCBI chr10:97,099,090...98,281,697 JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4353952|PMID:19543268) Ensembl
MGI
PMID:19543268 GO_REF:0000107 MGI:4353952 NCBI chr16:60,560,132...60,596,782
Ensembl chr16:60,581,258...60,586,596
JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTHRC1 collagen triple helix repeat containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3814781|PMID:18606138) MGI
Ensembl
PMID:18606138 GO_REF:0000107 MGI:3814781 NCBI chr 8:98,227,661...98,239,984
Ensembl chr 8:98,227,705...98,240,753
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3814781|PMID:18606138) MGI PMID:18606138 MGI:3814781 NCBI chr20:3,521,066...3,549,301
Ensembl chr20:3,521,060...3,548,718
JBrowse link
establishment of planar polarity of embryonic epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:2667273|PMID:12842012) MGI PMID:12842012 MGI:2667273 NCBI chr19:28,842,332...29,030,672
Ensembl chr19:28,844,644...29,030,216
JBrowse link
G FOXF2 forkhead box F2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3617131|PMID:16439479) MGI
Ensembl
PMID:16439479 GO_REF:0000107 MGI:3617131 NCBI chr17:70,744,989...70,750,860
Ensembl chr17:70,745,011...70,750,652
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,270,126...2,293,705
Ensembl chr16:2,270,085...2,296,825
JBrowse link
establishment of planar polarity of follicular epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WDR1 WD repeat domain 1 involved_in ISO (MGI:5787764|PMID:25915128) UniProt PMID:25915128 MGI:5787764 NCBI chr27:39,929,749...39,973,892
Ensembl chr27:39,929,787...39,974,012
JBrowse link
microtubule cytoskeleton organization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRSK1 BR serine/threonine kinase 1 involved_in ISO (MGI:6148529|PMID:18268107) ARUK-UCL PMID:18268107 MGI:6148529 NCBI chr 6:47,888,813...47,915,019
Ensembl chr 6:47,888,920...47,917,920
JBrowse link
G LOC103235498 serine/threonine-protein kinase BRSK2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:1,193,740...1,258,829
Ensembl chr 1:1,193,808...1,258,433
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:2,270,126...2,293,705
Ensembl chr16:2,270,085...2,296,825
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chr11:12,016,542...12,170,496
Ensembl chr11:12,021,560...12,170,663
JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:4830023|PMID:20704721) MGI PMID:20704721 MGI:4830023 NCBI chr19:28,842,332...29,030,672
Ensembl chr19:28,844,644...29,030,216
JBrowse link
G DVL1 dishevelled segment polarity protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624185|PMID:16571627) MGI
TreeGrafter
Ensembl
PMID:16571627 GO_REF:0000107 GO_REF:0000118 MGI:3624185 NCBI chr20:130,105,032...130,118,978
Ensembl chr20:130,104,639...130,117,139
JBrowse link
G DVL2 dishevelled segment polarity protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3624185|PMID:16571627) MGI
TreeGrafter
Ensembl
PMID:16571627 GO_REF:0000107 GO_REF:0000118 MGI:3624185 NCBI chr16:6,599,056...6,608,613
Ensembl chr16:6,599,579...6,608,544
JBrowse link
G DVL3 dishevelled segment polarity protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821448|PMID:19008950) MGI
TreeGrafter
PMID:19008950 GO_REF:0000118 MGI:3821448 NCBI chr15:5,254,764...5,270,661
Ensembl chr15:5,254,661...5,270,403
JBrowse link
G FZD1 frizzled class receptor 1 acts_upstream_of_or_within ISO (MGI:4837757|PMID:20940229) MGI PMID:20940229 MGI:4837757 NCBI chr21:57,695,000...57,702,666
Ensembl chr21:57,699,468...57,701,417
JBrowse link
G FZD2 frizzled class receptor 2 acts_upstream_of_or_within ISO (MGI:4837757|PMID:20940229) MGI PMID:20940229 MGI:4837757 NCBI chr16:61,837,202...61,839,126
Ensembl chr16:61,837,304...61,839,013
JBrowse link
G GRHL3 grainyhead like transcription factor 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4819429|PMID:20643356) MGI
Ensembl
PMID:20643356 GO_REF:0000107 MGI:4819429 NCBI chr20:108,338,891...108,375,351
Ensembl chr20:108,330,121...108,361,887
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4830023|PMID:20704721) MGI
Ensembl
PMID:20704721 GO_REF:0000107 MGI:4830023 NCBI chr17:29,001,797...29,083,767
Ensembl chr17:29,001,805...29,083,700
JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3793375|PMID:18257070) MGI
Ensembl
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chr 8:39,243,775...39,289,050
Ensembl chr 8:39,243,780...39,288,984
JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chr 7:100,336,442...100,345,093
Ensembl chr 7:100,336,119...100,345,086
JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chr 9:90,931,819...90,938,156 JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:4837757|PMID:20940229)
(MGI:4830023|PMID:20704721)
(MGI:3821448|PMID:19008950)
(MGI:3624185|PMID:16571627)
(MGI:4819429|PMID:20643356)
(MGI:3793375|PMID:18257070)
MGI PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 More... MGI:3624185 MGI:3793375 MGI:3821448 MGI:4819429 MGI:4830023 MGI:4837757 NCBI chr20:3,521,066...3,549,301
Ensembl chr20:3,521,060...3,548,718
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chr22:16,809,454...16,836,815
Ensembl chr22:16,809,451...16,825,048
JBrowse link
protein localization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:3835694|PMID:18849982) MGI PMID:18849982 MGI:3835694 NCBI chr19:28,842,332...29,030,672
Ensembl chr19:28,844,644...29,030,216
JBrowse link
G NPHP1 nephrocystin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:13,520,573...13,589,980
Ensembl chr14:13,520,541...13,589,146
JBrowse link
regulation of establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JHY junctional cadherin complex regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6103256|PMID:29211732) MGI
Ensembl
PMID:29211732 GO_REF:0000107 MGI:6103256 NCBI chr 1:114,275,896...114,354,819
Ensembl chr 1:114,276,335...114,352,816
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (MGI:5430302|PMID:19959710) UniProt PMID:19959710 MGI:5430302 NCBI chr17:20,411,746...20,873,601 JBrowse link
G SAPCD2 suppressor APC domain containing 2 involved_in ISO (MGI:5882149|PMID:26766442) UniProt PMID:26766442 MGI:5882149 NCBI chr12:1,119,873...1,127,966
Ensembl chr12:1,121,302...1,127,533
JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3839161|PMID:19300477) Ensembl
MGI
PMID:19300477 GO_REF:0000107 MGI:3839161 NCBI chr 8:39,243,775...39,289,050
Ensembl chr 8:39,243,780...39,288,984
JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3839161|PMID:19300477) MGI PMID:19300477 MGI:3839161 NCBI chr 7:100,336,442...100,345,093
Ensembl chr 7:100,336,119...100,345,086
JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (MGI:3839161|PMID:19300477) MGI PMID:19300477 MGI:3839161 NCBI chr 9:90,931,819...90,938,156 JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3839161|PMID:19300477) MGI PMID:19300477 MGI:3839161 NCBI chr20:3,521,066...3,549,301
Ensembl chr20:3,521,060...3,548,718
JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4438817|PMID:19966784) Ensembl
MGI
PMID:19966784 GO_REF:0000107 MGI:4438817 NCBI chr 7:57,363,133...57,463,056
Ensembl chr 7:57,387,167...57,462,276
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16771
    developmental process 6658
      anatomical structure morphogenesis 2878
        establishment of tissue polarity 43
          establishment of planar polarity 42
            cell-cell adhesion involved in establishment of planar polarity 0
            establishment of body hair or bristle planar orientation + 4
            establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
            establishment of imaginal disc-derived wing hair orientation + 0
            establishment of ommatidial planar polarity + 0
            establishment of planar polarity involved in nephron morphogenesis + 2
            establishment of planar polarity of embryonic epithelium + 18
            establishment of planar polarity of follicular epithelium 1
            establishment of planar polarity of larval imaginal disc epithelium 0
            microtubule cytoskeleton organization involved in establishment of planar polarity + 3
            protein localization involved in establishment of planar polarity 2
            regulation of establishment of planar polarity + 18
Path 2
Term Annotations click to browse term
  biological_process 16771
    developmental process 6658
      anatomical structure development 6258
        tissue development 2209
          tissue morphogenesis 705
            morphogenesis of an epithelium 593
              morphogenesis of a polarized epithelium 71
                establishment of planar polarity 42
                  cell-cell adhesion involved in establishment of planar polarity 0
                  establishment of body hair or bristle planar orientation + 4
                  establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
                  establishment of imaginal disc-derived wing hair orientation + 0
                  establishment of ommatidial planar polarity + 0
                  establishment of planar polarity involved in nephron morphogenesis + 2
                  establishment of planar polarity of embryonic epithelium + 18
                  establishment of planar polarity of follicular epithelium 1
                  establishment of planar polarity of larval imaginal disc epithelium 0
                  microtubule cytoskeleton organization involved in establishment of planar polarity + 3
                  protein localization involved in establishment of planar polarity 2
                  regulation of establishment of planar polarity + 18
paths to the root