Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:establishment of planar polarity
go back to main search page
Accession:GO:0001736 term browser browse the term
Definition:Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates.
Synonyms:narrow_synonym: establishment of planar cell polarity



show annotations for term's descendants           Sort by:
establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALMS1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:21071598) MGI PMID:21071598 NCBI chr17:49,301,397...49,513,729
Ensembl chr17:49,301,606...49,513,625
JBrowse link
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25877302) Ensembl
MGI
PMID:25877302 GO_REF:0000107 NCBI chr 4:71,435,994...71,567,567
Ensembl chr 4:71,430,575...71,567,267
JBrowse link
G DLG3 discs large MAGUK scaffold protein 3 acts_upstream_of_or_within ISO (PMID:21920314) MGI PMID:21920314 NCBI chr  X:54,886,700...54,941,502
Ensembl chr  X:54,886,389...54,939,675
JBrowse link
G EXOC5 exocyst complex component 5 involved_in
acts_upstream_of_or_within_positive_effect
IEA
ISO
IMP
(PMID:26040895) Ensembl
MGI
MGI
PMID:26040895 GO_REF:0000107 NCBI chr 8:32,789,311...32,848,045
Ensembl chr 8:32,778,715...32,848,050
JBrowse link
G FUZ fuzzy planar cell polarity protein involved_in ISO (MGI:4438317|PMID:19767740) UniProt PMID:19767740 MGI:4438317 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699
JBrowse link
G FZD3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16495441) Ensembl
MGI
PMID:16495441 GO_REF:0000107 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851
JBrowse link
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16495441) Ensembl
MGI
PMID:16495441 GO_REF:0000107 NCBI chr13:4,732,541...4,771,294
Ensembl chr13:4,733,017...4,772,115
JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20643356) Ensembl
MGI
PMID:20643356 GO_REF:0000107 NCBI chr 2:75,290,594...75,324,593
Ensembl chr 2:75,290,596...75,324,496
JBrowse link
G IFT20 intraflagellar transport 20 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25605782) Ensembl
MGI
PMID:25605782 GO_REF:0000107 NCBI chr 9:42,581,117...42,587,830
Ensembl chr 9:42,581,433...42,587,804
JBrowse link
G INTU inturned planar cell polarity protein involved_in IEA InterPro GO_REF:0000002 NCBI chr19:13,193,252...13,276,593
Ensembl chr19:13,164,245...13,276,496
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20704721) Ensembl
MGI
PMID:20704721 GO_REF:0000107 NCBI chr12:11,593,017...11,657,149
Ensembl chr12:11,593,043...11,656,320
JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22927466) Ensembl
MGI
PMID:22927466 GO_REF:0000107 NCBI chr 2:62,080,159...62,179,694
Ensembl chr 2:62,080,080...62,178,284
JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14729569) Ensembl
MGI
PMID:14729569 GO_REF:0000107 NCBI chr34:21,766,861...21,985,095
Ensembl chr34:21,766,496...21,983,046
JBrowse link
G TTC8 tetratricopeptide repeat domain 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25605782) Ensembl
MGI
PMID:25605782 GO_REF:0000107 NCBI chr 8:60,061,670...60,115,464
Ensembl chr 8:60,061,732...60,115,075
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20643356) TreeGrafter
MGI
PMID:20643356 GO_REF:0000118 NCBI chr38:21,822,873...21,824,537 JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18953410) Ensembl
MGI
PMID:18953410 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
establishment of body hair planar orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASTN2 astrotactin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26418459) Ensembl
MGI
PMID:26418459 GO_REF:0000107 NCBI chr11:70,248,704...70,977,893
Ensembl chr11:70,249,060...71,097,833
JBrowse link
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18849982)
(PMID:19357712)
Ensembl
MGI
PMID:18849982 PMID:19357712 GO_REF:0000107 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26418459) Ensembl
MGI
PMID:26418459 GO_REF:0000107 NCBI chr13:4,732,541...4,771,294
Ensembl chr13:4,733,017...4,772,115
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:18849982) MGI PMID:18849982 NCBI chr38:21,822,873...21,824,537 JBrowse link
establishment of planar polarity involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22076439) Ensembl
MGI
PMID:22076439 GO_REF:0000107 NCBI chr37:19,029,647...20,134,576
Ensembl chr37:19,037,217...20,134,426
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19543268) Ensembl
MGI
PMID:19543268 GO_REF:0000107 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTHRC1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18606138) Ensembl
MGI
PMID:18606138 GO_REF:0000107 NCBI chr13:4,801,049...4,811,565
Ensembl chr13:4,805,577...4,811,282
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:18606138) MGI PMID:18606138 NCBI chr38:21,822,873...21,824,537 JBrowse link
establishment of planar polarity of embryonic epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12842012) Ensembl
MGI
PMID:12842012 GO_REF:0000107 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
G FOXF2 forkhead box F2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16439479) Ensembl
MGI
PMID:16439479 GO_REF:0000107 NCBI chr35:1,841,165...1,846,649
Ensembl chr35:1,841,123...1,846,663
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400
JBrowse link
establishment of planar polarity of follicular epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WDR1 WD repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:69,305,731...69,348,183
Ensembl chr 3:69,305,731...69,348,177
JBrowse link
microtubule cytoskeleton organization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRSK1 BR serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,367,050...102,384,942
Ensembl chr 1:102,367,581...102,385,466
JBrowse link
G BRSK2 BR serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:45,666,489...45,688,950
Ensembl chr18:45,628,970...45,689,494
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,648,057...46,731,259
Ensembl chr 9:46,648,052...46,771,400
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19056682) MGI PMID:19056682 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20704721) Ensembl
MGI
PMID:20704721 GO_REF:0000107 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571627) Ensembl
MGI
TreeGrafter
PMID:16571627 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:56,507,803...56,519,382
Ensembl chr 5:56,507,739...56,519,491
JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571627) Ensembl
MGI
TreeGrafter
PMID:16571627 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:32,194,326...32,201,922
Ensembl chr 5:32,194,313...32,201,857
JBrowse link
G DVL3 dishevelled segment polarity protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19008950) TreeGrafter
MGI
PMID:19008950 GO_REF:0000118 NCBI chr34:17,053,534...17,069,965
Ensembl chr34:17,053,343...17,068,389
JBrowse link
G FZD1 frizzled class receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20940229) Ensembl
MGI
PMID:20940229 GO_REF:0000107 NCBI chr14:17,046,911...17,050,515
Ensembl chr14:17,047,382...17,049,337
JBrowse link
G FZD2 frizzled class receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20940229) Ensembl
MGI
PMID:20940229 GO_REF:0000107 NCBI chr 9:18,888,711...18,890,549
Ensembl chr 9:18,888,696...18,890,525
JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20643356) Ensembl
MGI
PMID:20643356 GO_REF:0000107 NCBI chr 2:75,290,594...75,324,593
Ensembl chr 2:75,290,596...75,324,496
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20704721) Ensembl
MGI
PMID:20704721 GO_REF:0000107 NCBI chr12:11,593,017...11,657,149
Ensembl chr12:11,593,043...11,656,320
JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18257070) Ensembl
MGI
PMID:18257070 GO_REF:0000107 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (PMID:18257070) MGI PMID:18257070 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (PMID:18257070) MGI PMID:18257070 NCBI chr28:10,994,180...10,999,552
Ensembl chr28:10,993,930...10,999,564
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:16571627)
(PMID:18257070)
(PMID:20940229)
(PMID:20704721)
(PMID:20643356)
(PMID:19008950)
MGI PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 More... NCBI chr38:21,822,873...21,824,537 JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19056682) Ensembl
MGI
PMID:19056682 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
protein localization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18849982) Ensembl
MGI
PMID:18849982 GO_REF:0000107 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
G NPHP1 nephrocystin 1 involved_in IBA
IEA
GO_Central
TreeGrafter
GO_REF:0000033 GO_REF:0000118 NCBI chr17:35,076,527...35,136,674
Ensembl chr17:35,076,636...35,136,425
JBrowse link
regulation of establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JHY junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29211732) Ensembl
MGI
PMID:29211732 GO_REF:0000107 NCBI chr 5:11,382,105...11,443,219
Ensembl chr 5:11,384,434...11,443,185
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:19,280,866...19,744,669
Ensembl chr12:19,286,822...19,744,141
JBrowse link
G SAPCD2 suppressor APC domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,571,045...48,578,517
Ensembl chr 9:48,570,891...48,594,452
JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19300477) Ensembl
MGI
PMID:19300477 GO_REF:0000107 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (PMID:19300477) MGI PMID:19300477 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (PMID:19300477) MGI PMID:19300477 NCBI chr28:10,994,180...10,999,552
Ensembl chr28:10,993,930...10,999,564
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:19300477) MGI PMID:19300477 NCBI chr38:21,822,873...21,824,537 JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19966784) Ensembl
MGI
PMID:19966784 GO_REF:0000107 NCBI chr32:29,671,702...29,766,628
Ensembl chr32:29,671,738...29,772,192
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    developmental process 6855
      anatomical structure morphogenesis 3012
        establishment of tissue polarity 41
          establishment of planar polarity 40
            cell-cell adhesion involved in establishment of planar polarity 0
            establishment of body hair or bristle planar orientation + 4
            establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
            establishment of imaginal disc-derived wing hair orientation + 0
            establishment of ommatidial planar polarity + 0
            establishment of planar polarity involved in nephron morphogenesis + 2
            establishment of planar polarity of embryonic epithelium + 18
            establishment of planar polarity of follicular epithelium 1
            establishment of planar polarity of larval imaginal disc epithelium 0
            microtubule cytoskeleton organization involved in establishment of planar polarity + 3
            protein localization involved in establishment of planar polarity 2
            regulation of establishment of planar polarity + 18
Path 2
Term Annotations click to browse term
  biological_process 17878
    developmental process 6855
      anatomical structure development 6433
        tissue development 2265
          tissue morphogenesis 719
            morphogenesis of an epithelium 596
              morphogenesis of a polarized epithelium 72
                establishment of planar polarity 40
                  cell-cell adhesion involved in establishment of planar polarity 0
                  establishment of body hair or bristle planar orientation + 4
                  establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
                  establishment of imaginal disc-derived wing hair orientation + 0
                  establishment of ommatidial planar polarity + 0
                  establishment of planar polarity involved in nephron morphogenesis + 2
                  establishment of planar polarity of embryonic epithelium + 18
                  establishment of planar polarity of follicular epithelium 1
                  establishment of planar polarity of larval imaginal disc epithelium 0
                  microtubule cytoskeleton organization involved in establishment of planar polarity + 3
                  protein localization involved in establishment of planar polarity 2
                  regulation of establishment of planar polarity + 18
paths to the root