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ONTOLOGY REPORT - ANNOTATIONS


Term:establishment of planar polarity
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Accession:GO:0001736 term browser browse the term
Definition:Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates.
Synonyms:narrow_synonym: establishment of planar cell polarity


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establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alms1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (MGI:4867594|PMID:21071598) MGI PMID:21071598 MGI:4867594 NCBI chrNW_004955424:12,130,496...12,258,684
Ensembl chrNW_004955424:12,130,607...12,258,522
JBrowse link
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in ISO (MGI:2667273|PMID:12842012) UniProt PMID:12842012 MGI:2667273 NCBI chrNW_004955413:30,455,194...30,561,124
Ensembl chrNW_004955413:30,457,030...30,561,124
JBrowse link
G Cplane1 ciliogenesis and planar polarity effector complex subunit 1 acts_upstream_of_or_within ISO (MGI:5648689|PMID:25877302) MGI PMID:25877302 MGI:5648689 NCBI chrNW_004955426:21,867,876...21,991,889
Ensembl chrNW_004955426:21,868,017...21,983,747
JBrowse link
G Dlg3 discs large MAGUK scaffold protein 3 acts_upstream_of_or_within ISO (MGI:5299396|PMID:21920314) MGI PMID:21920314 MGI:5299396 NCBI chrNW_004955475:9,992,888...10,056,197
Ensembl chrNW_004955475:9,992,215...10,056,348
JBrowse link
G Exoc5 exocyst complex component 5 acts_upstream_of_or_within_positive_effect ISO (MGI:5699235|PMID:26040895)
(PMID:26040895)
MGI PMID:26040895 MGI:5699235 NCBI chrNW_004955466:11,115,902...11,191,353
Ensembl chrNW_004955466:11,116,907...11,191,911
JBrowse link
G Fuz fuzzy planar cell polarity protein involved_in ISO (MGI:4438317|PMID:19767740) UniProt PMID:19767740 MGI:4438317 NCBI chrNW_004955559:1,112,670...1,117,620
Ensembl chrNW_004955559:1,112,855...1,117,413
JBrowse link
G Fzd3 frizzled class receptor 3 acts_upstream_of_or_within ISO (MGI:3616416|PMID:16495441) MGI PMID:16495441 MGI:3616416 NCBI chrNW_004955403:50,899,658...50,959,077
Ensembl chrNW_004955403:50,899,523...50,959,071
JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO (MGI:3616416|PMID:16495441) MGI PMID:16495441 MGI:3616416 NCBI chrNW_004955417:27,465,730...27,493,752
Ensembl chrNW_004955417:27,465,701...27,494,790
JBrowse link
G Grhl3 grainyhead like transcription factor 3 acts_upstream_of_or_within ISO (MGI:4819429|PMID:20643356) MGI PMID:20643356 MGI:4819429 NCBI chrNW_004955452:4,125,792...4,159,699
Ensembl chrNW_004955452:4,128,269...4,160,683
JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO (MGI:5615303|PMID:25605782) MGI PMID:25605782 MGI:5615303 NCBI chrNW_004955481:4,799,548...4,807,751
Ensembl chrNW_004955481:4,799,548...4,807,751
JBrowse link
G Ptk7 protein tyrosine kinase 7 (inactive) acts_upstream_of_or_within ISO (MGI:4830023|PMID:20704721) MGI PMID:20704721 MGI:4830023 NCBI chrNW_004955437:9,037,933...9,094,237
Ensembl chrNW_004955437:9,037,661...9,094,287
JBrowse link
G Rpgrip1l RPGRIP1 like acts_upstream_of_or_within ISO (MGI:5449641|PMID:22927466) MGI PMID:22927466 MGI:5449641 NCBI chrNW_004955433:11,321,504...11,423,981
Ensembl chrNW_004955433:11,322,590...11,424,569
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO (MGI:3027687|PMID:14729569) MGI PMID:14729569 MGI:3027687 NCBI chrNW_004955420:18,178,639...18,384,786
Ensembl chrNW_004955420:18,176,155...18,384,786
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO (MGI:5615303|PMID:25605782) MGI PMID:25605782 MGI:5615303 NCBI chrNW_004955438:11,410,196...11,466,044
Ensembl chrNW_004955438:11,409,982...11,466,523
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within
involved_in
ISO (MGI:4819429|PMID:20643356)
(MGI:2657050|PMID:12724779), (MGI:3618551|PMID:15637299)
MGI
UniProt
PMID:12724779 PMID:15637299 PMID:20643356 MGI:2657050 MGI:3618551 MGI:4819429 NCBI chrNW_004955468:12,162,084...12,189,322
Ensembl chrNW_004955468:12,161,843...12,189,547
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (MGI:3829860|PMID:18953410) MGI PMID:18953410 MGI:3829860 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
establishment of body hair planar orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Astn2 astrotactin 2 acts_upstream_of_or_within ISO (MGI:5749616|PMID:26418459) MGI PMID:26418459 MGI:5749616 NCBI chrNW_004955419:10,486,200...11,387,553
Ensembl chrNW_004955419:10,486,118...11,390,085
JBrowse link
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:3835694|PMID:18849982)
(MGI:4429791|PMID:19357712)
MGI PMID:18849982 PMID:19357712 MGI:3835694 MGI:4429791 NCBI chrNW_004955413:30,455,194...30,561,124
Ensembl chrNW_004955413:30,457,030...30,561,124
JBrowse link
G Fzd6 frizzled class receptor 6 acts_upstream_of_or_within ISO (MGI:5749616|PMID:26418459) MGI PMID:26418459 MGI:5749616 NCBI chrNW_004955417:27,465,730...27,493,752
Ensembl chrNW_004955417:27,465,701...27,494,790
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3835694|PMID:18849982) MGI PMID:18849982 MGI:3835694 NCBI chrNW_004955468:12,162,084...12,189,322
Ensembl chrNW_004955468:12,161,843...12,189,547
JBrowse link
establishment of planar polarity involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbb4 erb-b2 receptor tyrosine kinase 4 acts_upstream_of_or_within ISO (MGI:5305530|PMID:22076439) MGI PMID:22076439 MGI:5305530 NCBI chrNW_004955457:3,177,905...4,236,152
Ensembl chrNW_004955457:3,177,991...4,228,558
JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO (MGI:4353952|PMID:19543268) MGI PMID:19543268 MGI:4353952 NCBI chrNW_004955478:10,816,405...10,841,416
Ensembl chrNW_004955478:10,816,405...10,841,416
JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 acts_upstream_of_or_within ISO (MGI:3814781|PMID:18606138) MGI PMID:18606138 MGI:3814781 NCBI chrNW_004955417:27,520,420...27,525,907 JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3814781|PMID:18606138) MGI PMID:18606138 MGI:3814781 NCBI chrNW_004955468:12,162,084...12,189,322
Ensembl chrNW_004955468:12,161,843...12,189,547
JBrowse link
establishment of planar polarity of embryonic epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:2667273|PMID:12842012) MGI PMID:12842012 MGI:2667273 NCBI chrNW_004955413:30,455,194...30,561,124
Ensembl chrNW_004955413:30,457,030...30,561,124
JBrowse link
G Foxf2 forkhead box F2 acts_upstream_of_or_within ISO (MGI:3617131|PMID:16439479) MGI PMID:16439479 MGI:3617131 NCBI chrNW_004955465:11,740,374...11,744,619
Ensembl chrNW_004955465:11,740,323...11,744,619
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (MGI:5477842|PMID:23533177) CACAO PMID:23533177 MGI:5477842 NCBI chrNW_004955481:608,897...686,454
Ensembl chrNW_004955481:608,897...686,452
JBrowse link
establishment of planar polarity of follicular epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdr1 WD repeat domain 1 involved_in ISO (MGI:5787764|PMID:25915128) UniProt PMID:25915128 MGI:5787764 NCBI chrNW_004955549:2,640,193...2,674,818
Ensembl chrNW_004955549:2,640,195...2,673,969
JBrowse link
microtubule cytoskeleton organization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk1 BR serine/threonine kinase 1 involved_in ISO (MGI:6148529|PMID:18268107) ARUK-UCL PMID:18268107 MGI:6148529 NCBI chrNW_004955567:924,728...943,092
Ensembl chrNW_004955567:924,734...943,701
JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in ISO (MGI:6148529|PMID:18268107) ARUK-UCL PMID:18268107 MGI:6148529 NCBI chrNW_004955476:10,911,515...10,951,544
Ensembl chrNW_004955476:10,911,515...10,929,183
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (MGI:5477842|PMID:23533177) CACAO PMID:23533177 MGI:5477842 NCBI chrNW_004955481:608,897...686,454
Ensembl chrNW_004955481:608,897...686,452
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:4830023|PMID:20704721) MGI PMID:20704721 MGI:4830023 NCBI chrNW_004955413:30,455,194...30,561,124
Ensembl chrNW_004955413:30,457,030...30,561,124
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO (MGI:3624185|PMID:16571627) MGI PMID:16571627 MGI:3624185 NCBI chrNW_004955486:9,464,390...9,469,984
Ensembl chrNW_004955486:9,464,313...9,469,984
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 acts_upstream_of_or_within ISO (MGI:3624185|PMID:16571627) MGI PMID:16571627 MGI:3624185 NCBI chrNW_004955467:9,675,912...9,683,996
Ensembl chrNW_004955467:9,675,912...9,683,996
JBrowse link
G Dvl3 dishevelled segment polarity protein 3 acts_upstream_of_or_within ISO (MGI:3821448|PMID:19008950) MGI PMID:19008950 MGI:3821448 NCBI chrNW_004955420:23,291,650...23,301,695
Ensembl chrNW_004955420:23,293,222...23,301,694
JBrowse link
G Fzd2 frizzled class receptor 2 acts_upstream_of_or_within ISO (MGI:4837757|PMID:20940229) MGI PMID:20940229 MGI:4837757 NCBI chrNW_004955451:17,501,410...17,503,726 JBrowse link
G Grhl3 grainyhead like transcription factor 3 acts_upstream_of_or_within ISO (MGI:4819429|PMID:20643356) MGI PMID:20643356 MGI:4819429 NCBI chrNW_004955452:4,125,792...4,159,699
Ensembl chrNW_004955452:4,128,269...4,160,683
JBrowse link
G Ptk7 protein tyrosine kinase 7 (inactive) acts_upstream_of_or_within ISO (MGI:4830023|PMID:20704721) MGI PMID:20704721 MGI:4830023 NCBI chrNW_004955437:9,037,933...9,094,237
Ensembl chrNW_004955437:9,037,661...9,094,287
JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321
JBrowse link
G Sfrp5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chrNW_004955507:3,836,607...3,841,910
Ensembl chrNW_004955507:3,836,607...3,841,910
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:4837757|PMID:20940229)
(MGI:4830023|PMID:20704721)
(MGI:3624185|PMID:16571627)
(MGI:3821448|PMID:19008950)
(MGI:3793375|PMID:18257070)
(MGI:4819429|PMID:20643356)
MGI PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 More... MGI:3624185 MGI:3793375 MGI:3821448 MGI:4819429 MGI:4830023 MGI:4837757 NCBI chrNW_004955468:12,162,084...12,189,322
Ensembl chrNW_004955468:12,161,843...12,189,547
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
protein localization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:3835694|PMID:18849982) MGI PMID:18849982 MGI:3835694 NCBI chrNW_004955413:30,455,194...30,561,124
Ensembl chrNW_004955413:30,457,030...30,561,124
JBrowse link
regulation of establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jhy junctional cadherin complex regulator acts_upstream_of_or_within ISO (MGI:6103256|PMID:29211732) MGI PMID:29211732 MGI:6103256 NCBI chrNW_004955412:23,721,638...23,781,935
Ensembl chrNW_004955412:23,721,815...23,781,688
JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in ISO (MGI:5430302|PMID:19959710) UniProt PMID:19959710 MGI:5430302 NCBI chrNW_004955411:5,988,100...6,434,369
Ensembl chrNW_004955411:5,990,316...6,432,301
JBrowse link
G Sapcd2 suppressor APC domain containing 2 involved_in ISO (MGI:5882149|PMID:26766442) UniProt PMID:26766442 MGI:5882149 NCBI chrNW_004955513:5,086,379...5,090,876 JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:3839161|PMID:19300477) MGI PMID:19300477 MGI:3839161 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3839161|PMID:19300477) MGI PMID:19300477 MGI:3839161 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321
JBrowse link
G Sfrp5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (MGI:3839161|PMID:19300477) MGI PMID:19300477 MGI:3839161 NCBI chrNW_004955507:3,836,607...3,841,910
Ensembl chrNW_004955507:3,836,607...3,841,910
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3839161|PMID:19300477) MGI PMID:19300477 MGI:3839161 NCBI chrNW_004955468:12,162,084...12,189,322
Ensembl chrNW_004955468:12,161,843...12,189,547
JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec24b SEC24 homolog B, COPII coat complex component acts_upstream_of_or_within ISO (MGI:4438817|PMID:19966784) MGI PMID:19966784 MGI:4438817 NCBI chrNW_004955496:666,728...732,829
Ensembl chrNW_004955496:666,404...717,862
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12326
    developmental process 5855
      anatomical structure morphogenesis 2557
        establishment of tissue polarity 38
          establishment of planar polarity 37
            cell-cell adhesion involved in establishment of planar polarity 0
            establishment of body hair or bristle planar orientation + 4
            establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
            establishment of imaginal disc-derived wing hair orientation + 0
            establishment of ommatidial planar polarity + 0
            establishment of planar polarity involved in nephron morphogenesis + 2
            establishment of planar polarity of embryonic epithelium + 17
            establishment of planar polarity of follicular epithelium 1
            establishment of planar polarity of larval imaginal disc epithelium 0
            microtubule cytoskeleton organization involved in establishment of planar polarity + 3
            protein localization involved in establishment of planar polarity 1
            regulation of establishment of planar polarity + 17
Path 2
Term Annotations click to browse term
  biological_process 12326
    developmental process 5855
      anatomical structure development 5541
        tissue development 1977
          tissue morphogenesis 659
            morphogenesis of an epithelium 555
              morphogenesis of a polarized epithelium 64
                establishment of planar polarity 37
                  cell-cell adhesion involved in establishment of planar polarity 0
                  establishment of body hair or bristle planar orientation + 4
                  establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
                  establishment of imaginal disc-derived wing hair orientation + 0
                  establishment of ommatidial planar polarity + 0
                  establishment of planar polarity involved in nephron morphogenesis + 2
                  establishment of planar polarity of embryonic epithelium + 17
                  establishment of planar polarity of follicular epithelium 1
                  establishment of planar polarity of larval imaginal disc epithelium 0
                  microtubule cytoskeleton organization involved in establishment of planar polarity + 3
                  protein localization involved in establishment of planar polarity 1
                  regulation of establishment of planar polarity + 17
paths to the root