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ONTOLOGY REPORT - ANNOTATIONS


Term:establishment of planar polarity
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Accession:GO:0001736 term browser browse the term
Definition:Coordinated organization of groups of cells in the plane of an epithelium, such that they all orient to similar coordinates.
Synonyms:narrow_synonym: establishment of planar cell polarity



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establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALMS1 ALMS1 centrosome and basal body associated protein acts_upstream_of_or_within ISO (PMID:21071598) MGI PMID:21071598 NCBI chr2A:73,438,657...73,671,313
Ensembl chr2A:74,926,650...75,152,139
JBrowse link
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr22:45,428,159...45,604,453 JBrowse link
G CPLANE1 ciliogenesis and planar polarity effector complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25877302) Ensembl
MGI
PMID:25877302 GO_REF:0000107 NCBI chr 5:73,122,305...73,265,343
Ensembl chr 5:78,402,466...78,544,807
JBrowse link
G DLG3 discs large MAGUK scaffold protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21920314) Ensembl
MGI
PMID:21920314 GO_REF:0000107 NCBI chr  X:59,712,755...59,773,372
Ensembl chr  X:69,771,477...69,831,369
JBrowse link
G EXOC5 exocyst complex component 5 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
ISO (PMID:26040895) MGI PMID:26040895 NCBI chr14:37,775,555...37,839,751
Ensembl chr14:56,050,175...56,089,615
JBrowse link
G FUZ fuzzy planar cell polarity protein involved_in ISO (MGI:4438317|PMID:19767740) UniProt PMID:19767740 MGI:4438317 NCBI chr19:46,819,833...46,826,235
Ensembl chr19:55,736,325...55,742,589
JBrowse link
G FZD3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16495441) Ensembl
MGI
PMID:16495441 GO_REF:0000107 NCBI chr 8:27,773,699...27,853,980
Ensembl chr 8:24,973,644...25,042,115
JBrowse link
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16495441) Ensembl
MGI
PMID:16495441 GO_REF:0000107 NCBI chr 8:99,954,523...99,989,153
Ensembl chr 8:102,110,317...102,144,363
JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20643356) Ensembl
MGI
PMID:20643356 GO_REF:0000107 NCBI chr 1:23,519,911...23,558,105
Ensembl chr 1:24,502,294...24,547,152
JBrowse link
G IFT20 intraflagellar transport 20 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25605782) Ensembl
MGI
PMID:25605782 GO_REF:0000107 NCBI chr17:28,438,960...28,446,113
Ensembl chr17:28,941,303...28,948,129
JBrowse link
G INTU inturned planar cell polarity protein involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:119,793,245...119,890,949
Ensembl chr 4:131,109,733...131,186,590
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20704721) Ensembl
MGI
PMID:20704721 GO_REF:0000107 NCBI chr 6:42,668,077...42,753,547
Ensembl chr 6:43,962,560...44,051,146
JBrowse link
G RPGRIP1L RPGRIP1 like involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22927466) Ensembl
MGI
PMID:22927466 GO_REF:0000107 NCBI chr16:33,836,361...33,939,265
Ensembl chr16:52,920,796...53,023,174
JBrowse link
G TP63 tumor protein p63 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14729569) Ensembl
MGI
PMID:14729569 GO_REF:0000107 NCBI chr 3:186,651,879...186,918,300
Ensembl chr 3:195,199,167...195,474,104
JBrowse link
G TTC8 tetratricopeptide repeat domain 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:25605782) Ensembl
MGI
PMID:25605782 GO_REF:0000107 NCBI chr14:69,446,355...69,502,351
Ensembl chr14:88,802,812...88,857,055
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20643356) TreeGrafter
MGI
PMID:20643356 GO_REF:0000118 NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18953410) Ensembl
MGI
PMID:18953410 GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
JBrowse link
establishment of body hair planar orientation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASTN2 astrotactin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26418459) Ensembl
MGI
PMID:26418459 GO_REF:0000107 NCBI chr 9:87,558,337...88,538,570
Ensembl chr 9:115,912,657...116,890,931
JBrowse link
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19357712)
(PMID:18849982)
Ensembl
MGI
PMID:18849982 PMID:19357712 GO_REF:0000107 Ensembl chr22:45,428,159...45,604,453 JBrowse link
G FZD6 frizzled class receptor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:26418459) Ensembl
MGI
PMID:26418459 GO_REF:0000107 NCBI chr 8:99,954,523...99,989,153
Ensembl chr 8:102,110,317...102,144,363
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:18849982) MGI PMID:18849982 NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281
JBrowse link
establishment of planar polarity involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERBB4 erb-b2 receptor tyrosine kinase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22076439) Ensembl
MGI
PMID:22076439 GO_REF:0000107 NCBI chr2B:98,625,630...99,795,371
Ensembl chr2B:217,069,644...218,272,006
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19543268) Ensembl
MGI
PMID:19543268 GO_REF:0000107 NCBI chr17:10,616,957...10,651,954 JBrowse link
establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTHRC1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18606138) Ensembl
MGI
PMID:18606138 GO_REF:0000107 NCBI chr 8:100,027,417...100,038,945
Ensembl chr 8:102,182,944...102,194,445
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:18606138) MGI PMID:18606138 NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281
JBrowse link
establishment of planar polarity of embryonic epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:12842012) Ensembl
MGI
PMID:12842012 GO_REF:0000107 Ensembl chr22:45,428,159...45,604,453 JBrowse link
G FOXF2 forkhead box F2 acts_upstream_of_or_within ISO (PMID:16439479) MGI PMID:16439479 NCBI chr 6:1,209,899...1,215,970 JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994
JBrowse link
establishment of planar polarity of follicular epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WDR1 WD repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:4,487,054...4,516,732
Ensembl chr 4:9,805,164...9,848,032
JBrowse link
microtubule cytoskeleton organization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRSK1 BR serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:52,326,538...52,355,060
Ensembl chr19:61,021,493...61,045,659
JBrowse link
G BRSK2 BR serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:1,424,873...1,495,630
Ensembl chr11:1,473,129...1,521,339
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19056682) MGI PMID:19056682 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973
JBrowse link
planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20704721) Ensembl
MGI
PMID:20704721 GO_REF:0000107 Ensembl chr22:45,428,159...45,604,453 JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571627) Ensembl
MGI
TreeGrafter
PMID:16571627 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:92,469...106,748
Ensembl chr 1:1,292,052...1,301,008
JBrowse link
G DVL2 dishevelled segment polarity protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16571627) Ensembl
MGI
TreeGrafter
PMID:16571627 GO_REF:0000107 GO_REF:0000118 NCBI chr17:7,255,241...7,264,452
Ensembl chr17:7,242,493...7,251,571
JBrowse link
G DVL3 dishevelled segment polarity protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19008950) TreeGrafter
MGI
PMID:19008950 GO_REF:0000118 NCBI chr 3:181,190,961...181,207,831
Ensembl chr 3:189,674,399...189,693,130
JBrowse link
G FZD1 frizzled class receptor 1 acts_upstream_of_or_within ISO (PMID:20940229) MGI PMID:20940229 NCBI chr 7:83,269,906...83,277,608 JBrowse link
G FZD2 frizzled class receptor 2 acts_upstream_of_or_within ISO (PMID:20940229) MGI PMID:20940229 NCBI chr17:12,839,362...12,843,803 JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20643356) Ensembl
MGI
PMID:20643356 GO_REF:0000107 NCBI chr 1:23,519,911...23,558,105
Ensembl chr 1:24,502,294...24,547,152
JBrowse link
G PTK7 protein tyrosine kinase 7 (inactive) involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20704721) Ensembl
MGI
PMID:20704721 GO_REF:0000107 NCBI chr 6:42,668,077...42,753,547
Ensembl chr 6:43,962,560...44,051,146
JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (PMID:18257070) MGI PMID:18257070 NCBI chr 8:40,507,027...40,555,053 JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18257070) Ensembl
MGI
PMID:18257070 GO_REF:0000107 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258
JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (PMID:18257070) MGI PMID:18257070 NCBI chr10:94,383,269...94,389,053
Ensembl chr10:97,877,790...97,882,850
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:16571627)
(PMID:19008950)
(PMID:18257070)
(PMID:20940229)
(PMID:20643356)
(PMID:20704721)
MGI PMID:16571627 PMID:18257070 PMID:19008950 PMID:20643356 PMID:20704721 More... NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19056682) Ensembl
MGI
PMID:19056682 GO_REF:0000107 NCBI chr 3:55,396,279...55,418,579
Ensembl chr 3:56,621,380...56,638,051
JBrowse link
protein localization involved in establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:18849982) Ensembl
MGI
PMID:18849982 GO_REF:0000107 Ensembl chr22:45,428,159...45,604,453 JBrowse link
G NPHP1 nephrocystin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr2A:91,520,612...91,602,187
Ensembl chr2A:111,625,267...111,706,205
JBrowse link
regulation of establishment of planar polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JHY junctional cadherin complex regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29211732) Ensembl
MGI
PMID:29211732 GO_REF:0000107 NCBI chr11:117,716,064...117,793,476
Ensembl chr11:121,639,251...121,712,928
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:51,166,516...51,635,057
Ensembl chr 6:52,435,462...52,903,309
JBrowse link
G SAPCD2 suppressor APC domain containing 2 involved_in ISO (MGI:5882149|PMID:26766442) UniProt PMID:26766442 MGI:5882149 NCBI chr 9:108,122,658...108,132,397 JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (PMID:19300477) MGI PMID:19300477 NCBI chr 8:40,507,027...40,555,053 JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19300477) Ensembl
MGI
PMID:19300477 GO_REF:0000107 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258
JBrowse link
G SFRP5 secreted frizzled related protein 5 acts_upstream_of_or_within ISO (PMID:19300477) MGI PMID:19300477 NCBI chr10:94,383,269...94,389,053
Ensembl chr10:97,877,790...97,882,850
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:19300477) MGI PMID:19300477 NCBI chr 1:135,754,897...135,783,031
Ensembl chr 1:139,683,745...139,704,281
JBrowse link
regulation of establishment of planar polarity involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEC24B SEC24 homolog B, COPII coat complex component involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19966784) Ensembl
MGI
PMID:19966784 GO_REF:0000107 NCBI chr 4:101,937,119...102,043,038
Ensembl chr 4:112,534,779...112,628,065
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16313
    developmental process 6551
      anatomical structure morphogenesis 2844
        establishment of tissue polarity 41
          establishment of planar polarity 40
            cell-cell adhesion involved in establishment of planar polarity 0
            establishment of body hair or bristle planar orientation + 4
            establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
            establishment of imaginal disc-derived wing hair orientation + 0
            establishment of ommatidial planar polarity + 0
            establishment of planar polarity involved in nephron morphogenesis + 2
            establishment of planar polarity of embryonic epithelium + 18
            establishment of planar polarity of follicular epithelium 1
            establishment of planar polarity of larval imaginal disc epithelium 0
            microtubule cytoskeleton organization involved in establishment of planar polarity + 3
            protein localization involved in establishment of planar polarity 2
            regulation of establishment of planar polarity + 18
Path 2
Term Annotations click to browse term
  biological_process 16313
    developmental process 6551
      anatomical structure development 6160
        tissue development 2183
          tissue morphogenesis 701
            morphogenesis of an epithelium 590
              morphogenesis of a polarized epithelium 74
                establishment of planar polarity 40
                  cell-cell adhesion involved in establishment of planar polarity 0
                  establishment of body hair or bristle planar orientation + 4
                  establishment of cell polarity involved in growth plate cartilage chondrocyte division + 0
                  establishment of imaginal disc-derived wing hair orientation + 0
                  establishment of ommatidial planar polarity + 0
                  establishment of planar polarity involved in nephron morphogenesis + 2
                  establishment of planar polarity of embryonic epithelium + 18
                  establishment of planar polarity of follicular epithelium 1
                  establishment of planar polarity of larval imaginal disc epithelium 0
                  microtubule cytoskeleton organization involved in establishment of planar polarity + 3
                  protein localization involved in establishment of planar polarity 2
                  regulation of establishment of planar polarity + 18
paths to the root