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ONTOLOGY REPORT - ANNOTATIONS


Term:in utero embryonic development
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Accession:GO:0001701 term browser browse the term
Definition:The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus.
Synonyms:only_in_taxon: NCBITaxon:32525 ! Theria


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in utero embryonic development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADCY9 adenylate cyclase 9 JBrowse link 6 37,213,251 37,334,820 RGD:13508589
G ALKBH1 alkB homolog 1, histone H2A dioxygenase JBrowse link 8 50,444,994 50,471,151 RGD:13508589
G AMOT angiomotin JBrowse link X 85,742,610 85,807,557 RGD:13508589
G APBA1 amyloid beta precursor protein binding family A member 1 JBrowse link 1 87,787,039 87,980,204 RGD:13508589
G APBA2 amyloid beta precursor protein binding family A member 2 JBrowse link 3 38,243,086 38,431,491 RGD:13508589
G APBA3 amyloid beta precursor protein binding family A member 3 JBrowse link 20 55,712,908 55,720,532 RGD:13508589
G APOB apolipoprotein B JBrowse link 17 15,877,937 15,916,032 RGD:13508589
G AR androgen receptor JBrowse link 24
X
34,713,390
51,969,785
34,731,461
52,167,450
RGD:13508589
G BCL2L1 BCL2 like 1 JBrowse link 24 21,145,214 21,209,425 RGD:13508589
G BMPR1A bone morphogenetic protein receptor type 1A JBrowse link 4 34,499,898 34,582,481 RGD:13508589
G BRK1 BRICK1 subunit of SCAR/WAVE actin nucleating complex JBrowse link 20 8,220,109 8,231,337 RGD:13508589
G C2CD3 C2 domain containing 3 centriole elongation regulator JBrowse link 21 24,127,390 24,272,473 RGD:13508589
G C6 complement C6 JBrowse link 4 68,223,626 68,318,773 RGD:13508589
G CCNB2 cyclin B2 JBrowse link 30 24,040,859 24,063,084 RGD:13508589
G CERT1 ceramide transporter 1 JBrowse link 3 30,860,103 30,964,991 RGD:13508589
G CHD7 chromodomain helicase DNA binding protein 7 JBrowse link 29 11,115,865 11,284,713 RGD:13508589
G CHST11 carbohydrate sulfotransferase 11 JBrowse link 10 33,555,629 33,810,808 RGD:13508589
G CHTOP chromatin target of PRMT1 JBrowse link 7 43,418,902 43,428,012 RGD:13508589
G CMIP c-Maf inducing protein JBrowse link 5 70,251,032 70,376,300 RGD:13508589
G COPS3 COP9 signalosome subunit 3 JBrowse link 5 42,143,397 42,169,509 RGD:13508589
G CPT2 carnitine palmitoyltransferase 2 JBrowse link 5 55,718,209 55,786,175 RGD:13508589
G CTNNB1 catenin beta 1 JBrowse link 23 10,559,722 10,572,933 RGD:13508589
G CUL4A cullin 4A JBrowse link 22 60,624,215 60,667,844 RGD:13508589
G EDN1 endothelin 1 JBrowse link 35 11,808,892 11,815,383 RGD:13508589
G EDNRA endothelin receptor type A JBrowse link 15 45,823,472 45,878,527 RGD:13508589
G ENDOG endonuclease G JBrowse link 9 54,809,470 54,812,795 RGD:13508589
G EPN1 epsin 1 JBrowse link 1 102,059,022 102,073,665 RGD:13508589
G EXOC3L2 exocyst complex component 3 like 2 JBrowse link 1 110,265,054 110,277,895 RGD:13508589
G FGFR1 fibroblast growth factor receptor 1 JBrowse link 16 27,029,902 27,080,514 RGD:13508589
G FLVCR1 FLVCR heme transporter 1 JBrowse link 7 11,001,155 11,038,910 RGD:13508589
G FOSL1 FOS like 1, AP-1 transcription factor subunit JBrowse link 18 51,366,719 51,374,411 RGD:13508589
G FOXF1 forkhead box F1 JBrowse link 5 66,343,776 66,347,785 RGD:13508589
G GATA1 GATA binding protein 1 JBrowse link X 41,991,321 41,998,319 RGD:13508589
G GATA3 GATA binding protein 3 JBrowse link 2 28,068,143 28,098,445 RGD:13508589
G GDF3 growth differentiation factor 3 JBrowse link 27 37,125,845 37,129,567 RGD:13508589
G GLI2 GLI family zinc finger 2 JBrowse link 19 29,128,401 29,383,324 RGD:13508589
G GLI3 GLI family zinc finger 3 JBrowse link 18 7,800,817 8,071,531 RGD:13508589
G GNA12 G protein subunit alpha 12 JBrowse link 6 14,375,144 14,476,018 RGD:13508589
G GNA13 G protein subunit alpha 13 JBrowse link 9 14,932,341 14,972,857 RGD:13508589
G HAND2 heart and neural crest derivatives expressed 2 JBrowse link 25 24,140,496 24,143,143 RGD:13508589
G HEG1 heart development protein with EGF like domains 1 JBrowse link 33 27,982,127 28,044,379 RGD:13508589
G HES3 hes family bHLH transcription factor 3 JBrowse link 5 60,134,351 60,136,924 RGD:13508589
G HINFP histone H4 transcription factor JBrowse link 5 14,731,592 14,742,893 RGD:13508589
G HSD17B2 hydroxysteroid 17-beta dehydrogenase 2 JBrowse link 5 69,927,888 70,009,306 RGD:13508589
G INPP5B inositol polyphosphate-5-phosphatase B JBrowse link 15 4,627,536 4,678,611 RGD:13508589
G INPP5K inositol polyphosphate-5-phosphatase K JBrowse link 9 45,660,445 45,680,407 RGD:13508589
G ITGB1 integrin subunit beta 1 JBrowse link 2 3,728,472 3,757,696 RGD:13508589
G JAG2 jagged canonical Notch ligand 2 JBrowse link 8 72,535,539 72,553,531 RGD:13508589
G KAT2A lysine acetyltransferase 2A JBrowse link 9 20,778,434 20,787,057 RGD:13508589
G KEAP1 kelch like ECH associated protein 1 JBrowse link 20 50,651,070 50,661,178 RGD:13508589
G KIDINS220 kinase D interacting substrate 220 JBrowse link 17 5,983,208 6,077,609 RGD:13508589
G KIF3A kinesin family member 3A JBrowse link 11 20,988,516 21,044,151 RGD:13508589
G KIFBP kinesin family binding protein JBrowse link 4 20,139,442 20,178,615 RGD:13508589
G LIG4 DNA ligase 4 JBrowse link 22 56,980,333 56,987,636 RGD:13508589
G MAFF MAF bZIP transcription factor F JBrowse link 10 26,475,478 26,486,109 RGD:13508589
G MAFG MAF bZIP transcription factor G JBrowse link 9 368,102 373,825 RGD:13508589
G MAN2A1 mannosidase alpha class 2A member 1 JBrowse link 3 2,340,392 2,477,458 RGD:13508589
G MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 JBrowse link 6 39,132,746 39,179,427 RGD:13508589
G MGAT1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase JBrowse link 11 114,587 129,014 RGD:13508589
G MIB1 mindbomb E3 ubiquitin protein ligase 1 JBrowse link 7 66,173,414 66,289,477 RGD:13508589
G MSH2 mutS homolog 2 JBrowse link 10 49,517,448 49,594,001 RGD:13508589
G MSX1 msh homeobox 1 JBrowse link 3 70,232,790 70,236,295 RGD:13508589
G MYBPHL myosin binding protein H like JBrowse link 6 42,523,529 42,537,012 RGD:13508589
G MYO18B myosin XVIIIB JBrowse link 26 19,520,287 19,776,007 RGD:13508589
G MYO1E myosin IE JBrowse link 30 24,067,622 24,265,567 RGD:13508589
G NMT1 N-myristoyltransferase 1 JBrowse link 9 18,422,103 18,462,612 RGD:13508589
G NOTCH1 notch receptor 1 JBrowse link 9 48,975,972 49,018,985 RGD:13508589
G NOTCH2 notch receptor 2 JBrowse link 17 56,854,825 57,020,157 RGD:13508589
G NSUN2 NOP2/Sun RNA methyltransferase 2 JBrowse link 34 7,145,176 7,172,761 RGD:13508589
G OCRL OCRL inositol polyphosphate-5-phosphatase JBrowse link X 100,760,302 100,817,673 RGD:13508589
G OTUD7B OTU deubiquitinase 7B JBrowse link 17 59,225,640 59,280,875 RGD:13508589
G PCGF2 polycomb group ring finger 2 JBrowse link 9 23,488,862 23,499,769 RGD:13508589
G PDGFRA platelet derived growth factor receptor alpha JBrowse link 13 46,729,722 46,775,828 RGD:13508589
G PDGFRB platelet derived growth factor receptor beta JBrowse link 4 58,925,922 58,963,639 RGD:13508589
G POLB DNA polymerase beta JBrowse link 16 23,306,359 23,335,352 RGD:13508589
G POLG2 DNA polymerase gamma 2, accessory subunit JBrowse link 9 12,258,188 12,298,376 RGD:13508589
G PRKCSH protein kinase C substrate 80K-H JBrowse link 20 49,905,246 49,916,551 RGD:13508589
G PRMT1 protein arginine methyltransferase 1 JBrowse link 1 106,849,864 106,859,896 RGD:13508589
G PSPH phosphoserine phosphatase JBrowse link 6 493,152 546,176 RGD:13508589
G PTH1R parathyroid hormone 1 receptor JBrowse link 20 41,905,265 41,924,712 RGD:13508589
G PTPRR protein tyrosine phosphatase receptor type R JBrowse link 10 12,385,121 12,618,438 RGD:13508589
G RBBP6 RB binding protein 6, ubiquitin ligase JBrowse link 6 21,480,445 21,512,436 RGD:13508589
G RCN1 reticulocalbin 1 JBrowse link 18 35,373,175 35,393,389 RGD:13508589
G RIC8A RIC8 guanine nucleotide exchange factor A JBrowse link 18 25,363,031 25,368,645 RGD:13508589
G RPGRIP1L RPGRIP1 like JBrowse link 2 62,080,159 62,179,694 RGD:13508589
G RRN3 RRN3 homolog, RNA polymerase I transcription factor JBrowse link 6 28,478,770 28,507,722 RGD:13508589
G RUNDC1 RUN domain containing 1 JBrowse link 9 20,071,040 20,080,597 RGD:13508589
G SEC24D SEC24 homolog D, COPII coat complex component JBrowse link 32 37,690,158 37,795,762 RGD:13508589
G SIN3A SIN3 transcription regulator family member A JBrowse link 30 38,231,844 38,306,665 RGD:13508589
G SLC25A20 solute carrier family 25 member 20 JBrowse link 20 40,244,222 40,271,100 RGD:13508589
G SLC30A1 solute carrier family 30 member 1 JBrowse link 7 9,952,373 9,959,382 RGD:13508589
G SLC34A2 solute carrier family 34 member 2 JBrowse link 3 84,686,505 84,717,579 RGD:13508589
G SLC39A1 solute carrier family 39 member 1 JBrowse link 7 43,171,219 43,174,876 RGD:13508589
G SLC39A3 solute carrier family 39 member 3 JBrowse link 20 56,458,318 56,464,099 RGD:13508589
G SLC5A7 solute carrier family 5 member 7 JBrowse link 10 35,879,880 35,908,203 RGD:13508589
G SMAD3 SMAD family member 3 JBrowse link 30 31,246,313 31,360,098 RGD:13508589
G SMAD4 SMAD family member 4 JBrowse link 1 23,875,989 23,930,027 RGD:13508589
G SMG9 SMG9 nonsense mediated mRNA decay factor JBrowse link 1 111,416,396 111,438,069 RGD:13508589
G SMPD4 sphingomyelin phosphodiesterase 4 JBrowse link 26 30,397,687 30,419,072 RGD:13508589
G SOX10 SRY-box transcription factor 10 JBrowse link 10 26,680,441 26,690,530 RGD:13508589
G SOX18 SRY-box transcription factor 18 JBrowse link 24 47,494,581 47,496,563 RGD:13508589
G SOX8 SRY-box transcription factor 8 JBrowse link 6 39,667,941 39,672,716 RGD:13508589
G SRSF1 serine and arginine rich splicing factor 1 JBrowse link 9 32,692,517 32,696,325 RGD:13508589
G SSR2 signal sequence receptor subunit 2 JBrowse link 7 41,790,289 41,801,438 RGD:13508589
G TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 JBrowse link 10 25,623,381 25,657,630 RGD:13508589
G TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 JBrowse link 9 11,133,634 11,459,738 RGD:13508589
G TBX3 T-box transcription factor 3 JBrowse link 26 11,694,885 11,709,594 RGD:13508589
G TENT5C terminal nucleotidyltransferase 5C JBrowse link 17 54,951,507 54,969,131 RGD:13508589
G TIE1 tyrosine kinase with immunoglobulin like and EGF like domains 1 JBrowse link 15 16,838,267 16,857,004 RGD:13508589
G TMEM100 transmembrane protein 100 JBrowse link 9 30,695,711 30,701,730 RGD:13508589
G TMEM231 transmembrane protein 231 JBrowse link 5 75,246,043 75,266,705 RGD:13508589
G TP53 tumor protein p53 JBrowse link 5 32,561,406 32,565,149 RGD:13508589
G TRAF6 TNF receptor associated factor 6 JBrowse link 18 31,674,242 31,689,160 RGD:13508589
G UBR3 ubiquitin protein ligase E3 component n-recognin 3 JBrowse link 36 14,537,900 14,723,942 RGD:13508589
G UNK unk zinc finger JBrowse link 9 4,767,696 4,801,324 RGD:13508589
G WDTC1 WD and tetratricopeptide repeats 1 JBrowse link 2 72,949,526 73,012,429 RGD:13508589
G WNT3A Wnt family member 3A JBrowse link 14 864,393 899,698 RGD:13508589
G WNT9B Wnt family member 9B JBrowse link 9 10,157,607 10,172,664 RGD:13508589
G XRCC2 X-ray repair cross complementing 2 JBrowse link 16 16,402,821 16,429,095 RGD:13508589
G YBX1 Y-box binding protein 1 JBrowse link 15 646,301 666,347 RGD:13508589
G YBX3 Y-box binding protein 3 JBrowse link 27 35,043,756 35,066,230 RGD:13508589
G YTHDC1 YTH domain containing 1 JBrowse link 13 58,818,424 58,858,241 RGD:13508589
G ZFAND5 zinc finger AN1-type containing 5 JBrowse link 1 85,420,091 85,429,843 RGD:13508589
blastocyst development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CAPN2 calpain 2 JBrowse link 7 40,333,379 40,367,158 RGD:13508589
G EMG1 EMG1 N1-specific pseudouridine methyltransferase JBrowse link 27 38,069,089 38,075,577 RGD:13508589
G HNF1A HNF1 homeobox A JBrowse link 26 16,805,690 16,826,065 RGD:13508589
G HORMAD1 HORMA domain containing 1 JBrowse link 17 59,860,527 59,883,031 RGD:13508589
G LOC489591 cyclin-dependent kinase 11B JBrowse link 5 56,698,267 56,714,075 RGD:13508589
G NEK2 NIMA related kinase 2 JBrowse link 7 10,039,617 10,052,511 RGD:13508589
G PSMC4 proteasome 26S subunit, ATPase 4 JBrowse link 1 113,548,351 113,557,725 RGD:13508589
G TGFBR1 transforming growth factor beta receptor 1 JBrowse link 11 56,191,383 56,223,042 RGD:13508589
G THOC2 THO complex 2 JBrowse link X 95,087,209 95,217,450 RGD:13508589
G XAB2 XPA binding protein 2 JBrowse link 20 52,392,521 52,406,071 RGD:13508589
blastocyst formation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACTL6A actin like 6A JBrowse link 34 12,922,506 12,988,334 RGD:13508589
G CCNB1IP1 cyclin B1 interacting protein 1 JBrowse link 15 17,673,065 17,701,701 RGD:13508589
G GABPA GA binding protein transcription factor subunit alpha JBrowse link 31 21,216,931 21,251,658 RGD:13508589
G MFN2 mitofusin 2 JBrowse link 2 84,284,719 84,310,715 RGD:13508589
G MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase JBrowse link 10 27,082,616 27,098,994 RGD:13508589
G PNLDC1 PARN like, ribonuclease domain containing 1 JBrowse link 1 49,045,153 49,063,008 RGD:13508589
G RRP7 ribosomal RNA processing 7 homolog JBrowse link 10 22,882,662 22,892,301 RGD:13508589
G RTN4 reticulon 4 JBrowse link 10 55,884,452 55,954,476 RGD:13508589
G SF3B6 splicing factor 3b subunit 6 JBrowse link 17 18,548,633 18,559,694 RGD:13508589
G SKIL SKI like proto-oncogene JBrowse link 34 34,871,770 34,898,681 RGD:13508589
G SUPT6H SPT6 homolog, histone chaperone and transcription elongation factor JBrowse link 9 42,859,154 42,896,044 RGD:13508589
G WDR74 WD repeat domain 74 JBrowse link 18 53,855,207 53,861,700 RGD:13508589
G ZP3 zona pellucida glycoprotein 3 JBrowse link 6 7,586,212 7,594,610 RGD:13508589
blastocyst growth term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 21 33,915,804 33,949,597 RGD:13508589
G NBN nibrin JBrowse link 29 35,416,093 35,477,569 RGD:13508589
G POU5F1 POU class 5 homeobox 1 JBrowse link 12 860,702 866,099 RGD:13508589
G RTF1 RTF1 homolog, Paf1/RNA polymerase II complex component JBrowse link 30 8,468,001 8,524,712 RGD:13508589
G ZNF830 zinc finger protein 830 JBrowse link 9 38,382,508 38,384,060 RGD:13508589
blastocyst hatching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP3 A-kinase anchoring protein 3 JBrowse link 27 40,217,313 40,255,934 RGD:13508589
G BCOR BCL6 corepressor JBrowse link X 34,621,314 34,735,502 RGD:13508589
G CCDC62 coiled-coil domain containing 62 JBrowse link 26 6,655,819 6,697,283 RGD:13508589
G COPRS coordinator of PRMT5 and differentiation stimulator JBrowse link 9 41,098,226 41,104,035 RGD:13508589
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 21 33,915,804 33,949,597 RGD:13508589
G LOC489590 solute carrier family 35 member E2 JBrowse link 5 56,715,798 56,739,464 RGD:13508589
G LPAR6 lysophosphatidic acid receptor 6 JBrowse link 22 3,110,797 3,112,973 RGD:13508589
G NDUFA2 NADH:ubiquinone oxidoreductase subunit A2 JBrowse link 2 35,803,452 35,805,530 RGD:13508589
G NECAB1 N-terminal EF-hand calcium binding protein 1 JBrowse link 29 36,154,555 36,332,111 RGD:13508589
G PHF6 PHD finger protein 6 JBrowse link X 105,044,232 105,093,663 RGD:13508589
G PLPP4 phospholipid phosphatase 4 JBrowse link 28 30,502,287 30,585,324 RGD:13508589
G PPP4R4 protein phosphatase 4 regulatory subunit 4 JBrowse link 8 63,203,297 63,300,354 RGD:13508589
G RBBP8 RB binding protein 8, endonuclease JBrowse link 7 65,218,288 65,319,696 RGD:13508589
G SLC25A34 solute carrier family 25 member 34 JBrowse link 2 81,859,294 81,864,808 RGD:13508589
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 26 28,692,610 28,728,778 RGD:13508589
G SMIM14 small integral membrane protein 14 JBrowse link 3 72,839,897 72,934,335 RGD:13508589
G TBL1XR1 TBL1X receptor 1 JBrowse link 34 40,573,631 40,690,975 RGD:13508589
G ZFP14 ZFP14 zinc finger protein RGD:13508589
branching involved in labyrinthine layer morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADM adrenomedullin JBrowse link 21 33,472,197 33,474,472 RGD:13508589
G FZD5 frizzled class receptor 5 JBrowse link 37 16,123,788 16,126,634 RGD:13508589
G GCM1 glial cells missing transcription factor 1 JBrowse link 12 20,623,593 20,642,861 RGD:13508589
G GRB2 growth factor receptor bound protein 2 JBrowse link 9 5,108,128 5,182,091 RGD:13508589
G IL10 interleukin 10 JBrowse link 7 5,933,285 5,937,057 RGD:13508589
G RSPO3 R-spondin 3 JBrowse link 1 65,858,822 65,936,160 RGD:13508589
G SPINT1 serine peptidase inhibitor, Kunitz type 1 JBrowse link 30 7,976,094 7,989,019 RGD:13508589
cell differentiation involved in embryonic placenta development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EOMES eomesodermin JBrowse link 23 16,476,498 16,512,406 RGD:13508589
G GCM1 glial cells missing transcription factor 1 JBrowse link 12 20,623,593 20,642,861 RGD:13508589
G STK3 serine/threonine kinase 3 JBrowse link 13 647,363 920,887 RGD:13508589
chorio-allantoic fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BMP5 bone morphogenetic protein 5 JBrowse link 12 23,089,429 23,202,176 RGD:13508589
G CCN1 cellular communication network factor 1 JBrowse link 6 62,443,285 62,446,246 RGD:13508589
G LEF1 lymphoid enhancer binding factor 1 JBrowse link 32 28,516,002 28,633,759 RGD:13508589
G ZFP36L1 ZFP36 ring finger protein like 1 JBrowse link 8 42,663,287 42,668,665 RGD:13508589
embryonic placenta development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARNT aryl hydrocarbon receptor nuclear translocator RGD:13508589
G CEBPB CCAAT enhancer binding protein beta JBrowse link 24 36,661,294 36,663,162 RGD:13508589
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link 1 31,522,911 31,525,342 RGD:13508589
G CSF2 colony stimulating factor 2 JBrowse link 11 20,342,880 20,346,959 RGD:13508589
G EGFR epidermal growth factor receptor JBrowse link 18 5,983,669 6,044,092 RGD:13508589
G EPAS1 endothelial PAS domain protein 1 JBrowse link 10 48,550,836 48,636,776 RGD:13508589
G GATA2 GATA binding protein 2 JBrowse link 20 2,472,251 2,488,380 RGD:13508589
G HIF1A hypoxia inducible factor 1 subunit alpha JBrowse link 8 36,614,045 36,656,692 RGD:13508589
G HSF1 heat shock transcription factor 1 JBrowse link 13 37,724,741 37,745,259 RGD:13508589
G MED1 mediator complex subunit 1 JBrowse link 9 22,989,257 23,019,350 RGD:13508589
G NODAL nodal growth differentiation factor JBrowse link 4 21,366,828 21,374,623 RGD:13508589
G PDGFB platelet derived growth factor subunit B JBrowse link 10 25,798,877 25,819,422 RGD:13508589
G PKD2 polycystin 2, transient receptor potential cation channel JBrowse link 32 11,383,441 11,437,603 RGD:13508589
G SP3 Sp3 transcription factor JBrowse link 36 18,023,750 18,086,995 RGD:13508589
G TTPA alpha tocopherol transfer protein JBrowse link 29 13,177,690 13,198,910 RGD:13508589
embryonic placenta morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SETD2 SET domain containing 2, histone lysine methyltransferase JBrowse link 20 41,675,539 41,800,697 RGD:13508589
G ZNF568 zinc finger protein 568 JBrowse link 1 115,896,324 115,975,907 RGD:13508589
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GRHL2 grainyhead like transcription factor 2 JBrowse link 13 3,204,898 3,362,533 RGD:13508589
G SPINT2 serine peptidase inhibitor, Kunitz type 2 JBrowse link 1 114,699,050 114,727,802 RGD:13508589
glycogen cell differentiation involved in embryonic placenta development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKT1 AKT serine/threonine kinase 1 JBrowse link 8 72,317,399 72,335,686 RGD:13508589
inner cell mass cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 21 33,915,804 33,949,597 RGD:13508589
G HNF1B HNF1 homeobox B JBrowse link 9 37,437,992 37,493,200 RGD:13508589
G NLE1 notchless homolog 1 JBrowse link 9 38,222,083 38,230,819 RGD:13508589
G RAD51D RAD51 paralog D JBrowse link 9 38,242,178 38,259,788 RGD:13508589
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase JBrowse link 9 38,271,419 38,346,103 RGD:13508589
inner cell mass cell fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LATS1 large tumor suppressor kinase 1 JBrowse link 1 40,430,096 40,475,193 RGD:13508589
G PRDM14 PR/SET domain 14 JBrowse link 29 19,203,798 19,220,149 RGD:13508589
inner cell mass cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BRCA2 BRCA2 DNA repair associated JBrowse link 25 7,734,450 7,797,851 RGD:13508589
G CHEK1 checkpoint kinase 1 JBrowse link 5 8,878,511 8,910,626 RGD:13508589
G GINS1 GINS complex subunit 1 JBrowse link 23 1,567,723 1,598,910 RGD:13508589
G GINS4 GINS complex subunit 4 JBrowse link 16 24,055,720 24,068,469 RGD:13508589
G PALB2 partner and localizer of BRCA2 JBrowse link 6 22,209,711 22,237,798 RGD:13508589
G SALL4 spalt like transcription factor 4 JBrowse link 24 37,941,498 37,959,713 RGD:13508589
G TAF8 TATA-box binding protein associated factor 8 JBrowse link 12 10,689,268 10,720,945 RGD:13508589
G ZPR1 ZPR1 zinc finger JBrowse link 5 16,778,803 16,787,493 RGD:13508589
inner cell mass cellular morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LATS1 large tumor suppressor kinase 1 JBrowse link 1 40,430,096 40,475,193 RGD:13508589
G SOX17 SRY-box transcription factor 17 JBrowse link 29 5,979,092 5,981,504 RGD:13508589
labyrinthine layer blood vessel development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKT1 AKT serine/threonine kinase 1 JBrowse link 8 72,317,399 72,335,686 RGD:13508589
G CCN1 cellular communication network factor 1 JBrowse link 6 62,443,285 62,446,246 RGD:13508589
G FZD5 frizzled class receptor 5 JBrowse link 37 16,123,788 16,126,634 RGD:13508589
G GGNBP2 gametogenetin binding protein 2 JBrowse link 9 36,430,194 36,463,248 RGD:13508589
G HS6ST1 heparan sulfate 6-O-sulfotransferase 1 JBrowse link 19 22,343,193 22,372,464 RGD:13508589
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit JBrowse link 20 49,358,904 49,360,746 RGD:13508589
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 26 31,013,607 31,132,998 RGD:13508589
G NSDHL NAD(P) dependent steroid dehydrogenase-like JBrowse link X 120,720,118 120,754,573 RGD:13508589
G PLCD1 phospholipase C delta 1 JBrowse link 23 7,782,495 7,804,969 RGD:13508589
G PLCD3 phospholipase C delta 3 JBrowse link 9 18,399,946 18,419,630 RGD:13508589
G PLG plasminogen JBrowse link 1 49,497,229 49,535,260 RGD:13508589
G TMED2 transmembrane p24 trafficking protein 2 JBrowse link 26 6,039,046 6,047,490 RGD:13508589
G VASH2 vasohibin 2 JBrowse link 7 11,073,156 11,111,813 RGD:13508589
G WNT2 Wnt family member 2 JBrowse link 14 56,123,735 56,172,113 RGD:13508589
labyrinthine layer development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BIRC6 baculoviral IAP repeat containing 6 JBrowse link 17 25,618,262 25,847,920 RGD:13508589
G CDX2 caudal type homeobox 2 JBrowse link 25 11,701,134 11,707,883 RGD:13508589
G CDX4 caudal type homeobox 4 JBrowse link X 57,123,670 57,135,557 RGD:13508589
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 JBrowse link X 56,327,104 56,332,608 RGD:13508589
G PCDH12 protocadherin 12 JBrowse link 2 36,886,224 36,900,373 RGD:13508589
G SENP2 SUMO specific peptidase 2 JBrowse link 34 18,325,373 18,357,152 RGD:13508589
labyrinthine layer morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NCOA1 nuclear receptor coactivator 1 JBrowse link 17 18,880,676 19,124,300 RGD:13508589
negative regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SNAI1 snail family transcriptional repressor 1 JBrowse link 24 36,498,343 36,503,623 RGD:13508589
regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GCM1 glial cells missing transcription factor 1 JBrowse link 12 20,623,593 20,642,861 RGD:13508589
G STK3 serine/threonine kinase 3 JBrowse link 13 647,363 920,887 RGD:13508589
regulation of spongiotrophoblast cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G NRK Nik related kinase JBrowse link X 79,341,449 79,488,046 RGD:13508589
spongiotrophoblast differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ASCL2 achaete-scute family bHLH transcription factor 2 JBrowse link 18 46,394,034 46,396,723 RGD:13508589
G LIF LIF interleukin 6 family cytokine JBrowse link 26 23,400,226 23,418,538 RGD:13508589
spongiotrophoblast layer development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ADM adrenomedullin JBrowse link 21 33,472,197 33,474,472 RGD:13508589
G BIRC6 baculoviral IAP repeat containing 6 JBrowse link 17 25,618,262 25,847,920 RGD:13508589
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 JBrowse link X 56,327,104 56,332,608 RGD:13508589
G SENP2 SUMO specific peptidase 2 JBrowse link 34 18,325,373 18,357,152 RGD:13508589
G ZFP36L1 ZFP36 ring finger protein like 1 JBrowse link 8 42,663,287 42,668,665 RGD:13508589
syncytiotrophoblast cell differentiation involved in labyrinthine layer development term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G FZD5 frizzled class receptor 5 JBrowse link 37 16,123,788 16,126,634 RGD:13508589
trophectodermal cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BYSL bystin like JBrowse link 12 10,580,881 10,592,313 RGD:13508589
G CDX2 caudal type homeobox 2 JBrowse link 25 11,701,134 11,707,883 RGD:13508589
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 JBrowse link 1 31,522,911 31,525,342 RGD:13508589
G CTR9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 21 33,915,804 33,949,597 RGD:13508589
G EOMES eomesodermin JBrowse link 23 16,476,498 16,512,406 RGD:13508589
G HAND1 heart and neural crest derivatives expressed 1 JBrowse link 4 55,231,061 55,234,640 RGD:13508589
G HOPX HOP homeobox JBrowse link 13 48,829,161 48,854,502 RGD:13508589
G JUNB JunB proto-oncogene, AP-1 transcription factor subunit JBrowse link 20 49,358,904 49,360,746 RGD:13508589
G POU5F1 POU class 5 homeobox 1 JBrowse link 12 860,702 866,099 RGD:13508589
G RBM46 RNA binding motif protein 46 JBrowse link 15 52,427,852 52,478,953 RGD:13508589
G SP3 Sp3 transcription factor JBrowse link 36 18,023,750 18,086,995 RGD:13508589
G SRF serum response factor JBrowse link 12 11,664,441 11,673,846 RGD:13508589
trophectodermal cell proliferation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACVR1C activin A receptor type 1C JBrowse link 36 3,534,231 3,583,310 RGD:13508589
G ZPR1 ZPR1 zinc finger JBrowse link 5 16,778,803 16,787,493 RGD:13508589
trophectodermal cellular morphogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CUL3 cullin 3 JBrowse link 25 37,730,903 37,819,851 RGD:13508589
G NODAL nodal growth differentiation factor JBrowse link 4 21,366,828 21,374,623 RGD:13508589
trophoblast giant cell differentiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G E2F8 E2F transcription factor 8 JBrowse link 21 41,340,410 41,358,261 RGD:13508589
G HAND1 heart and neural crest derivatives expressed 1 JBrowse link 4 55,231,061 55,234,640 RGD:13508589
G LIF LIF interleukin 6 family cytokine JBrowse link 26 23,400,226 23,418,538 RGD:13508589
G MDFI MyoD family inhibitor JBrowse link 12 10,324,499 10,339,699 RGD:13508589
G PLG plasminogen JBrowse link 1 49,497,229 49,535,260 RGD:13508589
G PLK4 polo like kinase 4 JBrowse link 19 13,041,739 13,060,300 RGD:13508589
G PRDM1 PR/SET domain 1 JBrowse link 12 63,454,242 63,495,278 RGD:13508589
G SENP2 SUMO specific peptidase 2 JBrowse link 34 18,325,373 18,357,152 RGD:13508589
G SNAI1 snail family transcriptional repressor 1 JBrowse link 24 36,498,343 36,503,623 RGD:13508589
G SOX15 SRY-box transcription factor 15 JBrowse link 5 32,507,869 32,509,763 RGD:13508589

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14250
    multicellular organismal process 4833
      multicellular organism development 3091
        embryo development 682
          embryo development ending in birth or egg hatching 441
            chordate embryonic development 435
              in utero embryonic development 250
                blastocyst development + 73
                embryonic placenta development + 61
Path 2
Term Annotations click to browse term
  biological_process 14250
    developmental process 3768
      anatomical structure development 3480
        multicellular organism development 3091
          embryo development 682
            embryo development ending in birth or egg hatching 441
              chordate embryonic development 435
                in utero embryonic development 250
                  blastocyst development + 73
                  embryonic placenta development + 61
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.