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ONTOLOGY REPORT - ANNOTATIONS


Term:in utero embryonic development
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Accession:GO:0001701 term browser browse the term
Definition:The process whose specific outcome is the progression of the embryo in the uterus over time, from formation of the zygote in the oviduct, to birth. An example of this process is found in Mus musculus.
Synonyms:only_in_taxon: NCBITaxon:32525 ! Theria



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in utero embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 acts_upstream_of_or_within ISO MGI:1931734|MGI:2447280|MGI:2651395|MGI:3696672 (PMID:14729481), (PMID:15037318), (PMID:17117439) RGD PMID:14729481 PMID:15037318 PMID:17117439 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
JBrowse link
G Acvr1b activin A receptor type 1B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857710 (PMID:15485907), (PMID:16564040)
Ensembl
RGD
PMID:15485907 PMID:16564040 GO_REF:0000107 NCBI chr 7:132,286,266...132,329,679
Ensembl chr 7:132,286,275...132,329,673
JBrowse link
G Acvr1c activin A receptor type 1C NOT|acts_upstream_of_or_within ISO MGI:3512292 (PMID:15485907) RGD PMID:15485907 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327
JBrowse link
G Acvrl1 activin A receptor like type 1 acts_upstream_of_or_within ISO MGI:2680088 (PMID:17911384) RGD PMID:17911384 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Ada adenosine deaminase acts_upstream_of_or_within ISO MGI:1857117 (PMID:7731963), (PMID:9272950) RGD PMID:7731963 PMID:9272950 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Adam10 ADAM metallopeptidase domain 10 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:12354787)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:12354787 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889
JBrowse link
G Adamts3 ADAM metallopeptidase with thrombospondin type 1, motif 3 acts_upstream_of_or_within ISO MGI:5585728 (PMID:27996060) RGD PMID:27996060 NCBI chr14:18,231,128...18,437,771
Ensembl chr14:18,231,165...18,435,556
JBrowse link
G Adcy9 adenylate cyclase 9 acts_upstream_of_or_within ISO MGI:5636912 (PMID:27996060) RGD PMID:27996060 NCBI chr10:11,138,966...11,262,067
Ensembl chr10:11,139,446...11,262,066
JBrowse link
G Add1 adducin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3799499 (PMID:18723693)
Ensembl
RGD
PMID:18723693 GO_REF:0000107 NCBI chr14:76,108,643...76,167,267
Ensembl chr14:76,108,654...76,167,182
JBrowse link
G Alkbh1 alkB homolog 1, histone H2A dioxygenase acts_upstream_of_or_within ISO MGI:3774031 (PMID:18163532) RGD PMID:18163532 NCBI chr 6:107,068,301...107,088,784
Ensembl chr 6:107,068,475...107,088,759
JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor ALS2 IEP RGD PMID:16049005 RGD:1599081 NCBI chr 9:60,613,182...60,686,394
Ensembl chr 9:60,613,167...60,670,737
JBrowse link
G Amot angiomotin acts_upstream_of_or_within ISO MGI:2656627 (PMID:12676095) RGD PMID:12676095 NCBI chr  X:108,982,399...109,041,265
Ensembl chr  X:108,984,022...109,041,272
JBrowse link
G Angpt1 angiopoietin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180145|MGI:99906 (PMID:11172728)
Ensembl
RGD
PMID:11172728 GO_REF:0000107 NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO MGI:3797584 (PMID:17986521) RGD PMID:17986521 NCBI chr19:50,940,284...51,098,962
Ensembl chr19:50,940,299...51,098,962
JBrowse link
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5637085 (PMID:27996060)
Ensembl
RGD
PMID:27996060 GO_REF:0000107 NCBI chr 5:61,309,183...61,350,596
Ensembl chr 5:61,309,183...61,350,596
JBrowse link
G Apba1 amyloid beta precursor protein binding family A member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1261791|MGI:1888527 (PMID:17167098)
Ensembl
RGD
PMID:17167098 GO_REF:0000107 NCBI chr 1:221,363,769...221,569,496
Ensembl chr 1:221,363,778...221,566,553
JBrowse link
G Apba2 amyloid beta precursor protein binding family A member 2 acts_upstream_of_or_within ISO MGI:1860297 (PMID:17167098) RGD PMID:17167098 NCBI chr 1:118,053,270...118,286,858
Ensembl chr 1:118,103,219...118,285,699
JBrowse link
G Apba3 amyloid beta precursor protein binding family A member 3 acts_upstream_of_or_within ISO MGI:1860297 (PMID:17167098) RGD PMID:17167098 NCBI chr 7:8,446,212...8,451,310
Ensembl chr 7:8,446,216...8,451,241
JBrowse link
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857625|MGI:2157775 (PMID:7878058), (PMID:9502790)
Ensembl
RGD
PMID:7878058 PMID:9502790 GO_REF:0000107 NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497
JBrowse link
G Ar androgen receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856319 (PMID:10319319)
Ensembl
RGD
PMID:10319319 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Armc5 armadillo repeat containing 5 acts_upstream_of_or_within ISO MGI:6098706 (PMID:28169274) RGD PMID:28169274 NCBI chr 1:182,820,141...182,826,913
Ensembl chr 1:182,820,141...182,826,907
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 involved_in ISO (PMID:12502753) RGD PMID:12502753 NCBI chr 1:138,236,235...138,392,868
Ensembl chr 1:138,189,940...138,393,153
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:2153832 (PMID:8090202) RGD PMID:8090202 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
JBrowse link
G Atf2 activating transcription factor 2 involved_in IEA
ISO
GO_REF:0000107
MGI:2443472|MGI:3720850 (PMID:17699753)
Ensembl
RGD
PMID:17699753 GO_REF:0000107 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Atf7 activating transcription factor 7 involved_in ISO MGI:109349 (PMID:17699753) RGD PMID:17699753 NCBI chr 7:133,660,491...133,750,902
Ensembl chr 7:133,663,294...133,750,848
JBrowse link
G Atp11a ATPase phospholipid transporting 11A acts_upstream_of_or_within ISO MGI:4363953 (PMID:27996060) RGD PMID:27996060 NCBI chr16:76,657,752...76,767,640
Ensembl chr16:76,657,752...76,767,640
JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:10864443 RGD:1599395 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3840236|MGI:3840238|MGI:88276 (PMID:19204372)
Ensembl
RGD
PMID:19204372 GO_REF:0000107 NCBI chr10:15,163,477...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G B9d1 B9 domain containing 1 acts_upstream_of_or_within ISO MGI:5301332 (PMID:22179047) RGD PMID:22179047 NCBI chr10:46,186,222...46,196,309
Ensembl chr10:46,186,691...46,196,008
JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 involved_in IEA
ISO
GO_REF:0000107
MGI:5439653 (PMID:22878500)
Ensembl
RGD
PMID:22878500 GO_REF:0000107 NCBI chr16:6,446,709...6,455,535
Ensembl chr16:6,446,709...6,455,535
JBrowse link
G Bcl2l1 Bcl2-like 1 acts_upstream_of_or_within ISO MGI:2158303 (PMID:10618441) RGD PMID:10618441 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Bcl2l11 Bcl2-like 11 acts_upstream_of_or_within ISO MGI:97603 (PMID:16282979) RGD PMID:16282979 NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:99161 (PMID:11290297) RGD PMID:11290297 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3583785 (PMID:16314491)
Ensembl
RGD
PMID:16314491 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158342|MGI:2158390 (PMID:17359964) RGD PMID:17359964 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Brk1 BRICK1 subunit of SCAR/WAVE actin nucleating complex acts_upstream_of_or_within ISO MGI:3872157 (PMID:20861187) RGD PMID:20861187 NCBI chr 4:146,750,821...146,766,050
Ensembl chr 4:146,750,821...146,768,856
JBrowse link
G Btf3 basic transcription factor 3 acts_upstream_of_or_within ISO MGI:3688730 (PMID:7655515) RGD PMID:7655515 NCBI chr 2:29,659,764...29,666,898
Ensembl chr 2:29,659,231...29,666,879
JBrowse link
G Bysl bystin-like acts_upstream_of_or_within ISO MGI:3697441 (PMID:17055491) RGD PMID:17055491 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339
JBrowse link
G C19h19orf67 similar to human chromosome 19 open reading frame 67 acts_upstream_of_or_within ISO MGI:5289829 (PMID:27996060) RGD PMID:27996060 NCBI chr19:24,146,815...24,150,983
Ensembl chr19:24,146,815...24,150,095
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator acts_upstream_of_or_within ISO (PMID:19004860) RGD PMID:19004860 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520
JBrowse link
G C5 complement C5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:88513 (PMID:18947875)
Ensembl
RGD
PMID:18947875 GO_REF:0000107 NCBI chr 3:18,270,696...18,361,994
Ensembl chr 3:18,270,696...18,361,994
JBrowse link
G C6 complement C6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:88513 (PMID:18947875)
Ensembl
RGD
PMID:18947875 GO_REF:0000107 NCBI chr 2:53,846,028...53,921,279
Ensembl chr 2:53,851,985...53,921,275
JBrowse link
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 acts_upstream_of_or_within ISO MGI:4431915 (PMID:27996060) RGD PMID:27996060 NCBI chr12:1,643,062...1,666,685
Ensembl chr12:1,643,251...1,666,685
JBrowse link
G Ccm2 CCM2 scaffold protein acts_upstream_of_or_within ISO MGI:1924696|MGI:3512761 (PMID:19151727) RGD PMID:19151727 NCBI chr14:81,418,418...81,464,114
Ensembl chr14:81,418,236...81,464,116
JBrowse link
G Ccnb1 cyclin B1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2429976 (PMID:9539739)
Ensembl
RGD
PMID:9539739 GO_REF:0000107 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172
JBrowse link
G Ccnb2 cyclin B2 acts_upstream_of_or_within ISO MGI:2429974 (PMID:9539739) RGD PMID:9539739 NCBI chr 8:71,087,594...71,100,794
Ensembl chr 8:71,087,595...71,100,874
JBrowse link
G Ccnk cyclin K acts_upstream_of_or_within ISO MGI:4348808 (PMID:22012619) RGD PMID:22012619 NCBI chr 6:127,090,115...127,113,195
Ensembl chr 6:127,090,569...127,113,191
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:2389020 (PMID:15775979) RGD PMID:15775979 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Cdh11 cadherin 11 acts_upstream_of_or_within ISO MGI:3526861 (PMID:17143286) RGD PMID:17143286 NCBI chr19:2,148,447...2,305,754
Ensembl chr19:2,148,458...2,304,272
JBrowse link
G Cdk2ap1 cyclin-dependent kinase 2 associated protein 1 acts_upstream_of_or_within ISO MGI:3512185 (PMID:19229340) RGD PMID:19229340 NCBI chr12:32,249,752...32,258,483
Ensembl chr12:32,249,747...32,258,479
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A acts_upstream_of_or_within ISO MGI:1924285 (PMID:26334721) RGD PMID:26334721 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO MGI:4433345 (PMID:27996060) RGD PMID:27996060 NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
JBrowse link
G Cert1 ceramide transporter 1 acts_upstream_of_or_within ISO MGI:3837565|MGI:5287775 (PMID:19139267), (PMID:27996060) RGD PMID:19139267 PMID:27996060 NCBI chr 2:27,882,546...27,987,090
Ensembl chr 2:27,882,555...27,987,074
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in
acts_upstream_of_or_within
ISO (PMID:15300250)
MGI:3588650 (PMID:16207732)
RGD PMID:15300250 PMID:16207732 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3530648 (PMID:15367660)
Ensembl
RGD
PMID:15367660 GO_REF:0000107 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285
JBrowse link
G Chrd chordin involved_in ISO MGI:2157350 (PMID:12810603) RGD PMID:12810603 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4363643 (PMID:27996060)
Ensembl
RGD
PMID:27996060 GO_REF:0000107 NCBI chr 7:20,524,535...20,743,008
Ensembl chr 7:20,528,100...20,743,111
JBrowse link
G Chtop chromatin target of PRMT1 acts_upstream_of_or_within ISO MGI:4842477 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:175,981,266...175,992,820
Ensembl chr 2:175,981,271...175,992,748
JBrowse link
G Cir1 corepressor interacting with RBPJ, 1 acts_upstream_of_or_within ISO MGI:5577261 (PMID:27996060) RGD PMID:27996060 NCBI chr 3:58,158,923...58,188,799
Ensembl chr 3:58,158,951...58,188,789
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (PMID:16579983) RGD PMID:16579983 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Cmip c-Maf-inducing protein acts_upstream_of_or_within ISO MGI:5286409 (PMID:27996060) RGD PMID:27996060 NCBI chr19:45,304,597...45,510,653
Ensembl chr19:45,304,031...45,508,709
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2677631 (PMID:32879327) RGD PMID:32879327 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO MGI:1857431|MGI:1860700 (PMID:25330296) RGD PMID:25330296 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Cops3 COP9 signalosome subunit 3 acts_upstream_of_or_within ISO MGI:2678261 (PMID:12972600) RGD PMID:12972600 NCBI chr10:44,618,115...44,652,807
Ensembl chr10:44,618,115...44,641,597
JBrowse link
G Coq7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO MGI:2157003|MGI:2158322 (PMID:11585841), (PMID:11716496) RGD PMID:11585841 PMID:11716496 NCBI chr 1:172,836,359...172,851,173
Ensembl chr 1:172,835,188...172,851,158
JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5636913 (PMID:27996060)
Ensembl
RGD
PMID:27996060 GO_REF:0000107 NCBI chr 5:122,664,677...122,682,126
Ensembl chr 5:122,664,677...122,682,095
JBrowse link
G Cr1l complement C3b/C4b receptor 1 like acts_upstream_of_or_within ISO MGI:88233 (PMID:18947875) RGD PMID:18947875 NCBI chr13:106,606,952...106,660,442
Ensembl chr13:106,574,858...106,660,445
JBrowse link
G Cripto cripto, EGF-CFC family member acts_upstream_of_or_within ISO MGI:1857518 (PMID:9876177) RGD PMID:9876177 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Ctcf CCCTC-binding factor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28846746)
GO_REF:0000107
RGD
Ensembl
PMID:28846746 GO_REF:0000107 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1096327|MGI:2148567 (PMID:18231602), (PMID:19204372)
Ensembl
RGD
PMID:18231602 PMID:19204372 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Cubn cubilin IDA RGD PMID:15616221 RGD:1599657 NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
JBrowse link
G Cul3 cullin 3 acts_upstream_of_or_within ISO MGI:2651546 (PMID:10500095) RGD PMID:10500095 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462
JBrowse link
G Cul4a cullin 4A involved_in ISO (PMID:12077329) RGD PMID:12077329 NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330
JBrowse link
G Dab2 DAB adaptor protein 2 acts_upstream_of_or_within ISO MGI:2429678 (PMID:12413896) RGD PMID:12413896 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
JBrowse link
G Dbn1 drebrin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5501061 (PMID:27996060)
Ensembl
RGD
PMID:27996060 GO_REF:0000107 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
G Dhx35 DEAH-box helicase 35 acts_upstream_of_or_within ISO MGI:5637055 (PMID:27996060) RGD PMID:27996060 NCBI chr 3:147,450,178...147,507,473
Ensembl chr 3:147,450,163...147,507,451
JBrowse link
G Diaph3 diaphanous-related formin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5574347 (PMID:24239357)
Ensembl
RGD
PMID:24239357 GO_REF:0000107 NCBI chr15:62,543,375...63,013,060
Ensembl chr15:62,543,375...63,012,975
JBrowse link
G Dnaaf2 dynein, axonemal, assembly factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5532530 (PMID:31107948)
Ensembl
RGD
PMID:31107948 GO_REF:0000107 NCBI chr 6:87,661,101...87,670,267
Ensembl chr 6:87,660,821...87,670,199
JBrowse link
G Dsc3 desmocollin 3 acts_upstream_of_or_within ISO MGI:3615340 (PMID:16418220) RGD PMID:16418220 NCBI chr18:11,379,759...11,413,797
Ensembl chr18:11,377,347...11,413,797
JBrowse link
G Dusp3 dual specificity phosphatase 3 IDA RGD PMID:18035061 RGD:2317890 NCBI chr10:86,920,014...86,933,739
Ensembl chr10:86,920,014...86,933,962
JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within ISO MGI:1857637 (PMID:15327783) RGD PMID:15327783 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Ednra endothelin receptor type A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:15327783)
Ensembl
RGD
PMID:15327783 GO_REF:0000107 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Egfl8 EGF-like-domain, multiple 8 NOT|involved_in ISS
ISO
GO_REF:0000024
(PMID:15162510)
UniProt
RGD
PMID:15162510 GO_REF:0000024 NCBI chr20:4,132,930...4,136,024
Ensembl chr20:4,133,629...4,136,018
JBrowse link
G Eif2s2 eukaryotic translation initiation factor 2 subunit beta acts_upstream_of_or_within ISO MGI:3838881 (PMID:19168544) RGD PMID:19168544 NCBI chr 3:143,374,652...143,395,460
Ensembl chr 3:143,373,686...143,395,432
JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 acts_upstream_of_or_within ISO MGI:5444035 (PMID:22751931) RGD PMID:22751931 NCBI chr 9:87,886,126...87,914,470
Ensembl chr 9:87,878,085...87,914,482
JBrowse link
G Ell elongation factor for RNA polymerase II acts_upstream_of_or_within ISO MGI:1933265 (PMID:11118326) RGD PMID:11118326 NCBI chr16:18,843,775...18,891,484
Ensembl chr16:18,843,780...18,891,118
JBrowse link
G Emx1 empty spiracles homeobox 1 acts_upstream_of_or_within ISO MGI:894681 (PMID:23861879) RGD PMID:23861879 NCBI chr 4:117,725,148...117,741,616
Ensembl chr 4:117,725,155...117,741,613
JBrowse link
G Endog endonuclease G acts_upstream_of_or_within ISO MGI:3034030|MGI:3514265 (PMID:14663139) RGD PMID:14663139 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932
JBrowse link
G Eno1 enolase 1 acts_upstream_of_or_within ISO MGI:3050549 (PMID:9626503) RGD PMID:9626503 NCBI chr 5:160,719,951...160,731,337
Ensembl chr 5:160,719,951...160,731,336
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (PMID:18794329) RGD PMID:18794329 NCBI chr13:30,670,792...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Epn1 Epsin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1333766 (PMID:19666558)
Ensembl
RGD
PMID:19666558 GO_REF:0000107 NCBI chr 1:68,742,491...68,760,570
Ensembl chr 1:68,742,789...68,758,874
JBrowse link
G Epn2 epsin 2 acts_upstream_of_or_within ISO MGI:1333763 (PMID:19666558) RGD PMID:19666558 NCBI chr10:46,197,785...46,259,673
Ensembl chr10:46,197,785...46,259,642
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:3693615|MGI:3696121 (PMID:17020410) RGD PMID:17020410 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102
JBrowse link
G Erf Ets2 repressor factor acts_upstream_of_or_within ISO MGI:3719472 (PMID:17502352) RGD PMID:17502352 NCBI chr 1:80,829,935...80,838,388
Ensembl chr 1:80,829,935...80,838,388
JBrowse link
G Esrrb estrogen-related receptor beta acts_upstream_of_or_within ISO MGI:1857422 (PMID:9285590) RGD PMID:9285590 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Etnk2 ethanolamine kinase 2 acts_upstream_of_or_within ISO MGI:3526407 (PMID:16861741) RGD PMID:16861741 NCBI chr13:44,811,012...44,829,052
Ensembl chr13:44,811,015...44,829,037
JBrowse link
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO MGI:4415819 (PMID:18462699) RGD PMID:18462699 NCBI chr 1:85,890,562...85,894,025
Ensembl chr 1:85,890,559...85,893,431
JBrowse link
G Exoc3l2 exocyst complex component 3-like 2 acts_upstream_of_or_within ISO MGI:5548646 (PMID:27996060) RGD PMID:27996060 NCBI chr 1:79,113,784...79,145,359
Ensembl chr 1:79,112,506...79,145,465
JBrowse link
G Fendrr FOXF1 adjacent non-coding developmental regulatory RNA involved_in ISO MGI:5563522 (PMID:25909911) RGD PMID:25909911 NCBI chr19:49,127,225...49,152,780
Ensembl chr19:49,121,214...49,153,240
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:95523 (PMID:17687036) RGD PMID:17687036 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153790|MGI:95522 (PMID:17687036), (PMID:9435295) RGD PMID:9435295 PMID:17687036 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO MGI:5432211 (PMID:24777781) RGD PMID:24777781 NCBI chr10:85,345,434...85,357,998
Ensembl chr10:85,346,126...85,427,330
JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4835411 (PMID:23591631), (PMID:28039900) RGD PMID:23591631 PMID:28039900 NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992
JBrowse link
G Flcn folliculin involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:4348628 (PMID:21258407)
UniProt
RGD
PMID:21258407 GO_REF:0000024 NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769
JBrowse link
G Flvcr1 FLVCR choline and heme transporter 1 acts_upstream_of_or_within ISO MGI:3776021 (PMID:18258918) RGD PMID:18258918 NCBI chr13:102,586,263...102,608,647
Ensembl chr13:102,586,257...102,608,661
JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) RGD PMID:32369453 NCBI chr 6:105,408,355...105,472,355
Ensembl chr 6:105,408,339...105,472,353
JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2385824 (PMID:11044407) RGD PMID:11044407 NCBI chr 1:202,754,549...202,763,057
Ensembl chr 1:202,754,529...202,764,930
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (PMID:9152011) RGD PMID:9152011 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1856705 (PMID:4819561) RGD PMID:4819561 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
JBrowse link
G Foxd3 forkhead box D3 involved_in ISS
ISO
GO_REF:0000024
(PMID:12381664)
UniProt
RGD
PMID:12381664 GO_REF:0000024 NCBI chr 5:114,335,084...114,337,450
Ensembl chr 5:114,335,408...114,336,817
JBrowse link
G Foxf1 forkhead box F1 involved_in
acts_upstream_of_or_within
ISO (PMID:19500772)
MGI:1929432 (PMID:11124112), (PMID:11493558)
RGD PMID:11124112 PMID:11493558 PMID:19500772 NCBI chr19:49,153,949...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha acts_upstream_of_or_within ISO MGI:3665313 (PMID:17485447) RGD PMID:17485447 NCBI chr11:23,888,586...23,917,612
Ensembl chr11:23,888,815...23,917,605
JBrowse link
G Gata1 GATA binding protein 1 acts_upstream_of_or_within ISO MGI:2429992 (PMID:9576834) RGD PMID:9576834 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:3696958 (PMID:20702712) RGD PMID:20702712 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:2179443|MGI:2386265|MGI:3033220|MGI:3793424 (PMID:15310850), (PMID:20123909), (PMID:9136932), (PMID:9136933) RGD PMID:9136932 PMID:9136933 PMID:15310850 PMID:20123909 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Gata6 GATA binding protein 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177785|MGI:3793425 (PMID:20123909), (PMID:9832509)
Ensembl
RGD
PMID:9832509 PMID:20123909 GO_REF:0000107 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Gatad2a GATA zinc finger domain containing 2A acts_upstream_of_or_within ISO (PMID:17565372) RGD PMID:17565372 NCBI chr16:19,429,578...19,520,320
Ensembl chr16:19,429,578...19,519,587
JBrowse link
G Gdf1 growth differentiation factor 1 acts_upstream_of_or_within ISO MGI:2181719 (PMID:17936261) RGD PMID:17936261 NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,097,314...19,112,519
JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within ISO MGI:3612535|MGI:3764814|MGI:95683 (PMID:16368929), (PMID:17936261) RGD PMID:16368929 PMID:17936261 NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937
JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:1857177 (PMID:9486664) RGD PMID:9486664 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Gjb3 gap junction protein, beta 3 IEP RGD PMID:9291584 RGD:1599752 NCBI chr 5:139,649,227...139,654,970
Ensembl chr 5:139,649,195...139,654,980
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO MGI:3834146 (PMID:19056373) RGD PMID:19056373 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (PMID:16254602) RGD PMID:16254602 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
JBrowse link
G Gna12 G protein subunit alpha 12 acts_upstream_of_or_within ISO MGI:95768 (PMID:12077299) RGD PMID:12077299 NCBI chr12:13,805,580...13,886,255
Ensembl chr12:13,805,698...13,886,255
JBrowse link
G Gna13 G protein subunit alpha 13 acts_upstream_of_or_within ISO MGI:95767 (PMID:12077299) RGD PMID:12077299 NCBI chr10:94,337,939...94,370,774
Ensembl chr10:94,337,725...94,370,774
JBrowse link
G Gpi glucose-6-phosphate isomerase acts_upstream_of_or_within ISO MGI:1932543 (PMID:1582174) RGD PMID:1582174 NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4331210 (PMID:21262862) RGD PMID:21262862 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B acts_upstream_of_or_within ISO MGI:1928295 (PMID:9147327) RGD PMID:9147327 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G H19 H19 imprinted maternally expressed transcript IMP RGD PMID:18778817 RGD:5509951 NCBI chr 1:197,730,698...197,733,374
Ensembl chr 1:197,730,698...197,733,134
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 acts_upstream_of_or_within ISO MGI:2153823 (PMID:9500551) RGD PMID:9500551 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857639 (PMID:9171826)
Ensembl
RGD
PMID:9171826 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Hba-a1 hemoglobin alpha, adult chain 1 acts_upstream_of_or_within ISO MGI:96016 (PMID:7550311) RGD PMID:7550311 NCBI chr10:15,337,265...15,338,121
Ensembl chr10:15,307,815...15,338,392
JBrowse link
G Hba-a2 hemoglobin alpha, adult chain 2 acts_upstream_of_or_within ISO MGI:96015 (PMID:7550311) RGD PMID:7550311 NCBI chr10:15,323,830...15,324,677
Ensembl chr10:15,307,815...15,338,392
JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 acts_upstream_of_or_within ISO MGI:2684538 (PMID:14657344) RGD PMID:14657344 NCBI chr 8:59,222,206...59,259,626
Ensembl chr 8:59,221,653...59,259,639
JBrowse link
G Hdac3 histone deacetylase 3 involved_in ISO MGI:4889069 (PMID:32467224) RGD PMID:32467224 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within ISO MGI:2384924|MGI:3838392 (PMID:19151727) RGD PMID:19151727 NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:104877 (PMID:11500373) RGD PMID:11500373 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO MGI:104853 (PMID:11500373) RGD PMID:11500373 NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261
JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO MGI:4999724 (PMID:21445260) RGD PMID:21445260 NCBI chr 1:235,190,455...235,196,042
Ensembl chr 1:235,190,455...235,196,042
JBrowse link
G Hinfp histone H4 transcription factor involved_in ISO (PMID:19590016) RGD PMID:19590016 NCBI chr 8:44,634,333...44,644,288
Ensembl chr 8:44,634,333...44,641,000
JBrowse link
G Hm13 histocompatibility minor 13 acts_upstream_of_or_within ISO MGI:5637209 (PMID:27996060) RGD PMID:27996060 NCBI chr 3:141,145,792...141,183,557
Ensembl chr 3:141,145,782...141,184,703
JBrowse link
G Hsd17b2 hydroxysteroid (17-beta) dehydrogenase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3773836 (PMID:18048640)
Ensembl
RGD
PMID:18048640 GO_REF:0000107 NCBI chr19:45,753,576...45,825,203
Ensembl chr19:45,753,574...45,825,202
JBrowse link
G Hsf1 heat shock transcription factor 1 acts_upstream_of_or_within ISO MGI:2155444 (PMID:10545106) RGD PMID:10545106 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase acts_upstream_of_or_within ISO MGI:2183607|MGI:2680650 (PMID:11121396), (PMID:12105862) RGD PMID:11121396 PMID:12105862 NCBI chr 5:162,804,368...162,811,129
Ensembl chr 5:162,804,368...162,811,128
JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 involved_in ISO (PMID:20838829) RGD PMID:20838829 NCBI chr 1:196,045,836...196,052,554
Ensembl chr 1:196,045,666...196,047,232
JBrowse link
G Igf2 insulin-like growth factor 2 involved_in ISO (PMID:28522536) RGD PMID:28522536 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018
JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:17881493) RGD PMID:17881493 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
JBrowse link
G Inpp5b inositol polyphosphate-5-phosphatase B acts_upstream_of_or_within ISO MGI:109589 (PMID:20195868) RGD PMID:20195868 NCBI chr 5:136,996,766...137,061,315
Ensembl chr 5:136,996,686...137,061,315
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K acts_upstream_of_or_within ISO MGI:3810936 (PMID:18573875) RGD PMID:18573875 NCBI chr10:60,474,262...60,495,813
Ensembl chr10:60,475,897...60,496,773
JBrowse link
G Insl3 insulin-like 3 acts_upstream_of_or_within ISO MGI:2661997 (PMID:10319319) RGD PMID:10319319 NCBI chr16:18,398,682...18,400,566
Ensembl chr16:18,384,829...18,400,560
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2154539 (PMID:7544313)
Ensembl
RGD
PMID:7544313 GO_REF:0000107 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2657215 (PMID:9531541)
Ensembl
RGD
PMID:9531541 GO_REF:0000107 NCBI chr 6:131,983,059...132,005,665
Ensembl chr 6:131,983,056...132,005,818
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2153821 (PMID:10022836) RGD PMID:10022836 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035
JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:2386279|MGI:3711317 (PMID:17325035) RGD PMID:17325035 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (PMID:25463925) RGD PMID:25463925 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within ISO MGI:4126347|MGI:5448825|MGI:5516011 (PMID:22949634), (PMID:23028370) RGD PMID:22949634 PMID:23028370 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062
JBrowse link
G Kdm8 lysine demethylase 8 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104556|MGI:98834 (PMID:26334721)
Ensembl
RGD
PMID:26334721 GO_REF:0000107 NCBI chr 1:180,013,969...180,028,829
Ensembl chr 1:180,020,656...180,028,841
JBrowse link
G Keap1 Kelch-like ECH-associated protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2681416 (PMID:15087497)
Ensembl
RGD
PMID:15087497 GO_REF:0000107 NCBI chr 8:19,768,375...19,777,862
Ensembl chr 8:19,768,375...19,777,862
JBrowse link
G Kidins220 kinase D-interacting substrate 220 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4820793 (PMID:19449316)
Ensembl
RGD
PMID:19449316 GO_REF:0000107 NCBI chr 6:41,618,207...41,706,990
Ensembl chr 6:41,618,294...41,703,256
JBrowse link
G Kif3a kinesin family member 3a acts_upstream_of_or_within ISO MGI:1329045 (PMID:19286674) RGD PMID:19286674 NCBI chr10:37,725,930...37,761,183
Ensembl chr10:37,725,970...37,759,191
JBrowse link
G Kifbp kinesin family binding protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4939684 (PMID:27996060)
Ensembl
RGD
PMID:27996060 GO_REF:0000107 NCBI chr20:30,512,899...30,532,504
Ensembl chr20:30,512,901...30,532,476
JBrowse link
G Klf1 KLF transcription factor 1 acts_upstream_of_or_within ISO MGI:1857557 (PMID:7753194) RGD PMID:7753194 NCBI chr19:23,250,627...23,253,802
Ensembl chr19:23,250,631...23,253,758
JBrowse link
G Klf2 KLF transcription factor 2 acts_upstream_of_or_within ISO MGI:3047647 (PMID:15947087), (PMID:9859212) RGD PMID:9859212 PMID:15947087 NCBI chr16:17,521,107...17,523,739
Ensembl chr16:17,514,552...17,523,944
JBrowse link
G Kmt2d lysine methyltransferase 2D acts_upstream_of_or_within ISO MGI:3623309 (PMID:16540515) RGD PMID:16540515 NCBI chr 7:129,980,744...130,022,088
Ensembl chr 7:129,962,887...130,020,325
JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857720|MGI:1857732 (PMID:10911993), (PMID:16777961), (PMID:9823897) RGD PMID:9823897 PMID:10911993 PMID:16777961 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
JBrowse link
G Lrp1b LDL receptor related protein 1B acts_upstream_of_or_within ISO MGI:4459742|MGI:4459800 (PMID:20383322) RGD PMID:20383322 NCBI chr 3:24,594,302...26,715,037
Ensembl chr 3:24,594,991...26,715,505
JBrowse link
G Ly6e lymphocyte antigen 6 family member E acts_upstream_of_or_within ISO MGI:2429638 (PMID:11784869) RGD PMID:11784869 NCBI chr 7:106,935,530...106,939,689
Ensembl chr 7:106,935,761...106,939,689
JBrowse link
G Maff MAF bZIP transcription factor F acts_upstream_of_or_within ISO MGI:1858732|MGI:96911 (PMID:15087497) RGD PMID:15087497 NCBI chr 7:110,912,367...110,923,711
Ensembl chr 7:110,912,499...110,923,851
JBrowse link
G Mafg MAF bZIP transcription factor G acts_upstream_of_or_within ISO MGI:1858732 (PMID:15087497) RGD PMID:15087497 NCBI chr10:105,903,307...105,911,808
Ensembl chr10:105,903,237...105,912,026
JBrowse link
G Man2a1 mannosidase, alpha, class 2A, member 1 acts_upstream_of_or_within ISO MGI:2150656 (PMID:16754854) RGD PMID:16754854 NCBI chr 9:104,252,001...104,408,349
Ensembl chr 9:104,252,001...104,408,349
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3527900 (PMID:18324732)
Ensembl
RGD
PMID:18324732 GO_REF:0000107 NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 acts_upstream_of_or_within ISO MGI:2388006 (PMID:17287250) RGD PMID:17287250 NCBI chr 7:9,312,961...9,320,166
Ensembl chr 7:9,313,098...9,320,165
JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 involved_in ISO (PMID:12915312) RGD PMID:12915312 NCBI chr 2:144,639,819...144,814,395
Ensembl chr 2:144,670,285...144,814,368
JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:2158381 (PMID:17029558) RGD PMID:17029558 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2684189 (PMID:14500757) RGD PMID:14500757 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Meg3 maternally expressed 3 acts_upstream_of_or_within ISO MGI:3842511|MGI:4840060 (PMID:19264764), (PMID:20610486) RGD PMID:19264764 PMID:20610486 NCBI chr 6:128,491,808...128,524,010 JBrowse link
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO MGI:1857564 (PMID:8290590) RGD PMID:8290590 NCBI chr10:33,563,642...33,582,718
Ensembl chr10:33,561,388...33,591,503
JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3603514 (PMID:16000382) RGD PMID:16000382 NCBI chr18:1,802,519...1,926,988
Ensembl chr18:1,802,519...1,920,689
JBrowse link
G Mir106b microRNA 106b acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr12:17,043,344...17,043,425
Ensembl chr12:17,043,344...17,043,425
JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir18a microRNA 18a acts_upstream_of_or_within ISO MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860
JBrowse link
G Mir19a microRNA 19a acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO MGI:2676844|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
JBrowse link
G Mir25 microRNA 25 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619439|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr12:17,042,932...17,043,015
Ensembl chr12:17,042,932...17,043,015
JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917 (PMID:18329372) RGD PMID:18329372 NCBI chr15:92,181,336...92,181,413
Ensembl chr15:92,181,336...92,181,413
JBrowse link
G Mir93 microRNA 93 acts_upstream_of_or_within ISO MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3629917|MGI:3629918 (PMID:18329372) RGD PMID:18329372 NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221
JBrowse link
G Mosmo modulator of smoothened acts_upstream_of_or_within ISO (PMID:34486668) RGD PMID:34486668 NCBI chr 1:175,217,680...175,288,521
Ensembl chr 1:175,217,545...175,288,334
JBrowse link
G Mrtfb myocardin related transcription factor B acts_upstream_of_or_within ISO MGI:3587937 (PMID:17183527) RGD PMID:17183527 NCBI chr10:1,116,315...1,278,106
Ensembl chr10:1,116,310...1,277,897
JBrowse link
G Msh2 mutS homolog 2 involved_in
NOT|acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:98834 (PMID:9425892)
MGI:98834 (PMID:9288110)
Ensembl
RGD
PMID:9288110 PMID:9425892 GO_REF:0000107 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO MGI:1926386 (PMID:17601530) RGD PMID:17601530 NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966
JBrowse link
G Mt-nd4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 IEP RGD PMID:17307910 RGD:2302308 NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
NCBI chr MT:10,160...11,537
Ensembl chr MT:10,160...11,537
JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 acts_upstream_of_or_within ISO MGI:105373 (PMID:21406566) RGD PMID:21406566 NCBI chr 7:90,488,751...90,628,007
Ensembl chr 7:90,488,754...90,627,968
JBrowse link
G Muc1 mucin 1, cell surface associated IEP RGD PMID:21263748 RGD:7349384 NCBI chr 2:174,635,989...174,640,738
Ensembl chr 2:174,635,995...174,640,733
JBrowse link
G Myb MYB proto-oncogene, transcription factor acts_upstream_of_or_within ISO MGI:2662859|MGI:3047076 (PMID:10523863), (PMID:17927961) RGD PMID:10523863 PMID:17927961 NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057
JBrowse link
G Mybphl myosin binding protein H-like acts_upstream_of_or_within ISO MGI:5548569 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:196,005,297...196,018,826
Ensembl chr 2:196,005,325...196,018,824
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:23077551 RGD:7207883 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myh10 myosin heavy chain 10 acts_upstream_of_or_within ISO MGI:2386445|MGI:3052104 (PMID:11283949), (PMID:12893741), (PMID:9356462) RGD PMID:9356462 PMID:11283949 PMID:12893741 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Myh6 myosin heavy chain 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3652543 (PMID:8878443)
Ensembl
RGD
PMID:8878443 GO_REF:0000107 NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720
JBrowse link
G Myh9 myosin, heavy chain 9 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3511350|MGI:3641195 (PMID:15555549), (PMID:16630581)
Ensembl
RGD
PMID:15555549 PMID:16630581 GO_REF:0000107 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Myo18b myosin XVIIIb acts_upstream_of_or_within ISO MGI:3829997 (PMID:18761673) RGD PMID:18761673 NCBI chr12:43,747,003...43,953,694
Ensembl chr12:43,747,010...43,953,695
JBrowse link
G Myo1e myosin IE acts_upstream_of_or_within ISO MGI:3526864 (PMID:17143286) RGD PMID:17143286 NCBI chr 8:70,887,934...71,080,180
Ensembl chr 8:70,887,870...71,080,169
JBrowse link
G N4bp2l2 NEDD4 binding protein 2-like 2 acts_upstream_of_or_within ISO (PMID:18360097) RGD PMID:18360097 NCBI chr12:137,342...200,292
Ensembl chr12:103,590...197,784
JBrowse link
G Nbn nibrin involved_in ISS
ISO
GO_REF:0000024
(PMID:14612522)
UniProt
RGD
PMID:14612522 GO_REF:0000024 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
JBrowse link
G Nckap1 NCK-associated protein 1 acts_upstream_of_or_within ISO MGI:3578145 (PMID:16831833) RGD PMID:16831833 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in ISO MGI:1337080 (PMID:32467224) RGD PMID:32467224 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 acts_upstream_of_or_within
involved_in
ISO MGI:3765904 (PMID:17928865)
MGI:1349717 (PMID:32467224)
RGD PMID:17928865 PMID:32467224 NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 acts_upstream_of_or_within ISO MGI:2178449 (PMID:11062459), (PMID:18804437) RGD PMID:11062459 PMID:18804437 NCBI chr 1:67,778,037...67,810,941
Ensembl chr 1:67,777,948...68,023,736
JBrowse link
G Nmt1 N-myristoyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3586313 (PMID:15753093)
Ensembl
RGD
PMID:15753093 GO_REF:0000107 NCBI chr10:87,988,826...88,025,405
Ensembl chr10:87,988,826...88,022,648
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2158732|MGI:2180793 (PMID:11311163), (PMID:15485907) RGD PMID:11311163 PMID:15485907 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1862000 (PMID:17359964)
Ensembl
RGD
PMID:17359964 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:11732991)
Ensembl
RGD
PMID:11732991 GO_REF:0000107 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:1857230 (PMID:7789282) RGD PMID:7789282 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Notch2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857783 (PMID:17359302)
Ensembl
RGD
PMID:17359302 GO_REF:0000107 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
JBrowse link
G Npat nuclear protein, co-activator of histone transcription acts_upstream_of_or_within ISO MGI:5636907 (PMID:27996060) RGD PMID:27996060 NCBI chr 8:53,932,993...53,970,875
Ensembl chr 8:53,932,993...53,970,875
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO MGI:2385933|MGI:3579117 (PMID:17404209) RGD PMID:17404209 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031
JBrowse link
G Nradd neurotrophin receptor associated death domain IEP RGD PMID:12095158 RGD:1299507 NCBI chr 8:110,599,667...110,603,068
Ensembl chr 8:110,599,667...110,603,149
JBrowse link
G Nrbp1 nuclear receptor binding protein 1 involved_in ISO (PMID:22510880) RGD PMID:22510880 NCBI chr 6:25,122,635...25,133,209
Ensembl chr 6:25,122,635...25,133,182
JBrowse link
G Ns5atp4 NS5A transactivated protein 4 acts_upstream_of_or_within ISO MGI:4432969 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:175,494,406...175,507,281
Ensembl chr 2:175,494,304...175,510,663
JBrowse link
G Nsrp1 nuclear speckle splicing regulatory protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3923407 (PMID:21296756)
Ensembl
RGD
PMID:21296756 GO_REF:0000107 NCBI chr10:61,880,807...61,914,471
Ensembl chr10:61,880,825...61,914,471
JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 acts_upstream_of_or_within ISO MGI:4432654 (PMID:27996060) RGD PMID:27996060 NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862
JBrowse link
G Nxn nucleoredoxin acts_upstream_of_or_within ISO MGI:5548389 (PMID:27996060) RGD PMID:27996060 NCBI chr10:61,109,322...61,247,578
Ensembl chr10:61,110,020...61,248,251
JBrowse link
G Ocrl OCRL, inositol polyphosphate-5-phosphatase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:103257 (PMID:20195868)
Ensembl
RGD
PMID:20195868 GO_REF:0000107 NCBI chr  X:127,089,508...127,140,362
Ensembl chr  X:127,089,590...127,140,362
JBrowse link
G Ooep oocyte expressed protein acts_upstream_of_or_within ISO MGI:3812181 (PMID:18804437) RGD PMID:18804437 NCBI chr 8:79,223,388...79,224,554
Ensembl chr 8:79,223,375...79,224,541
JBrowse link
G Otud7b OTU deubiquitinase 7B acts_upstream_of_or_within ISO MGI:5637162 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:183,661,955...183,722,584
Ensembl chr 2:183,662,163...183,718,674
JBrowse link
G P2ry2 purinergic receptor P2Y2 IEP RGD PMID:14517997 RGD:2316694 NCBI chr 1:155,352,050...155,367,423
Ensembl chr 1:155,351,165...155,367,632
JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO MGI:5495930 (PMID:23657012) RGD PMID:23657012 NCBI chr 1:176,665,076...176,689,053
Ensembl chr 1:176,665,076...176,688,990
JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within ISO MGI:88174 (PMID:11290297) RGD PMID:11290297 NCBI chr10:82,682,563...82,694,563
Ensembl chr10:82,683,553...82,693,406
JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1926728 (PMID:10331973), (PMID:17143286)
Ensembl
RGD
PMID:10331973 PMID:17143286 GO_REF:0000107 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta acts_upstream_of_or_within ISO MGI:2135508 (PMID:17143286) RGD PMID:17143286 NCBI chr18:54,499,962...54,538,840
Ensembl chr18:54,499,964...54,538,843
JBrowse link
G Pdzk1 PDZ domain containing 1 acts_upstream_of_or_within ISO MGI:5692756 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:184,376,161...184,407,514
Ensembl chr 2:184,376,161...184,407,514
JBrowse link
G Pitpnb phosphatidylinositol transfer protein, beta acts_upstream_of_or_within ISO MGI:3582490 (PMID:11907258) RGD PMID:11907258 NCBI chr12:45,249,308...45,298,388
Ensembl chr12:45,249,333...45,298,314
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO MGI:2136268 (PMID:11493526) RGD PMID:11493526 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO MGI:1197519|MGI:1857562 (PMID:16282979) RGD PMID:16282979 NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128
JBrowse link
G Plcg1 phospholipase C, gamma 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2388142 (PMID:11744703)
Ensembl
RGD
PMID:11744703 GO_REF:0000107 NCBI chr 3:149,385,587...149,416,330
Ensembl chr 3:149,385,587...149,416,330
JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3620600|MGI:3620601 (PMID:16467571)
Ensembl
RGD
PMID:16467571 GO_REF:0000107 NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
JBrowse link
G Polb DNA polymerase beta acts_upstream_of_or_within ISO MGI:4950969 (PMID:27996060) RGD PMID:27996060 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812
JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit acts_upstream_of_or_within ISO MGI:5470227 (PMID:23197651) RGD PMID:23197651 NCBI chr10:91,712,586...91,723,008
Ensembl chr10:91,712,586...91,723,008
JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO MGI:3605483 (PMID:15750184) RGD PMID:15750184 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
JBrowse link
G Prkcsh PRKCSH beta subunit of glucosidase II acts_upstream_of_or_within ISO MGI:5442302 (PMID:21685914) RGD PMID:21685914 NCBI chr 8:20,534,787...20,546,493
Ensembl chr 8:20,534,880...20,546,492
JBrowse link
G Prmt1 protein arginine methyltransferase 1 acts_upstream_of_or_within ISO MGI:2448365 (PMID:10848611) RGD PMID:10848611 NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345
JBrowse link
G Prrc2b proline-rich coiled-coil 2B acts_upstream_of_or_within ISO MGI:4461729 (PMID:27996060) RGD PMID:27996060 NCBI chr 3:15,433,357...15,519,105
Ensembl chr 3:15,465,294...15,519,104
JBrowse link
G Psph phosphoserine phosphatase acts_upstream_of_or_within ISO MGI:4950198 (PMID:27996060) RGD PMID:27996060 NCBI chr12:26,882,524...26,905,084
Ensembl chr12:26,883,133...26,905,074
JBrowse link
G Ptch1 patched 1 acts_upstream_of_or_within ISO MGI:2384818 (PMID:21406566) RGD PMID:21406566 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5014612 (PMID:27996060)
Ensembl
RGD
PMID:27996060 GO_REF:0000107 NCBI chr 8:110,693,910...110,725,458
Ensembl chr 8:110,697,485...110,719,729
JBrowse link
G Ptprr protein tyrosine phosphatase, receptor type, R involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:10601328)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10601328 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:51,662,595...51,929,605
Ensembl chr 7:51,662,595...51,929,603
JBrowse link
G Rad51b RAD51 paralog B acts_upstream_of_or_within ISO MGI:3621480|MGI:98834 (PMID:10567591) RGD PMID:10567591 NCBI chr 6:98,096,525...98,640,988
Ensembl chr 6:98,098,868...98,640,979
JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase acts_upstream_of_or_within ISO MGI:3711066 (PMID:17470788) RGD PMID:17470788 NCBI chr 1:177,503,988...177,537,397
Ensembl chr 1:177,503,313...177,535,678
JBrowse link
G Rcn1 reticulocalbin 1 acts_upstream_of_or_within ISO (PMID:19474196) RGD PMID:19474196 NCBI chr 3:91,841,052...91,855,295
Ensembl chr 3:91,841,052...91,855,295
JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) RGD PMID:17473173 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
JBrowse link
G Resp18 regulated endocrine-specific protein 18 acts_upstream_of_or_within ISO MGI:4949626 (PMID:21104147) RGD PMID:21104147 NCBI chr 9:76,765,179...76,771,824
Ensembl chr 9:76,764,590...76,778,722
JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A acts_upstream_of_or_within ISO MGI:3608888 (PMID:16221497) RGD PMID:16221497 NCBI chr 1:195,935,162...195,941,469
Ensembl chr 1:195,935,349...195,941,467
JBrowse link
G Rnaseh2b ribonuclease H2, subunit B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4432164 (PMID:22802351)
Ensembl
RGD
PMID:22802351 GO_REF:0000107 NCBI chr15:36,541,200...36,592,016
Ensembl chr15:36,541,218...36,584,118
JBrowse link
G Rpa1 replication protein A1 acts_upstream_of_or_within ISO MGI:3582609 (PMID:15470499) RGD PMID:15470499 NCBI chr10:60,148,869...60,199,970
Ensembl chr10:60,148,793...60,199,949
JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17553904) RGD PMID:17553904 NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
JBrowse link
G Rrn3 RRN3 homolog, RNA polymerase I transcription factor acts_upstream_of_or_within ISO MGI:3584037 (PMID:15989966) RGD PMID:15989966 NCBI chr10:2,129,949...2,165,381
Ensembl chr10:2,129,978...2,165,663
JBrowse link
G Rtcb RNA 2',3'-cyclic phosphate and 5'-OH ligase acts_upstream_of_or_within ISO (PMID:20510672) RGD PMID:20510672 NCBI chr 7:17,907,668...17,927,136
Ensembl chr 7:17,907,705...17,927,132
JBrowse link
G Rundc1 RUN domain containing 1 acts_upstream_of_or_within ISO MGI:5548750 (PMID:27996060) RGD PMID:27996060 NCBI chr10:86,361,635...86,375,446
Ensembl chr10:86,361,051...86,370,878
JBrowse link
G Runx1 RUNX family transcription factor 1 acts_upstream_of_or_within ISO MGI:3043614 (PMID:16174759) RGD PMID:16174759 NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
JBrowse link
G Rxra retinoid X receptor alpha acts_upstream_of_or_within ISO MGI:98215 (PMID:9892670) RGD PMID:9892670 NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
JBrowse link
G Rxrb retinoid X receptor beta acts_upstream_of_or_within ISO MGI:98214 (PMID:9892670) RGD PMID:9892670 NCBI chr20:4,816,813...4,823,267
Ensembl chr20:4,816,815...4,828,773
JBrowse link
G Sall4 spalt-like transcription factor 4 acts_upstream_of_or_within ISO MGI:3692447 (PMID:17060609) RGD PMID:17060609 NCBI chr 3:157,474,067...157,491,055
Ensembl chr 3:157,474,642...157,490,822
JBrowse link
G Sec24c SEC24 homolog C, COPII coat complex component acts_upstream_of_or_within ISO MGI:4431706 (PMID:24876386) RGD PMID:24876386 NCBI chr15:3,602,460...3,624,524
Ensembl chr15:3,602,460...3,624,422
JBrowse link
G Sec24d SEC24 homolog D, COPII coat complex component acts_upstream_of_or_within ISO MGI:4330860|MGI:4340594 (PMID:23596517), (PMID:24876386) RGD PMID:23596517 PMID:24876386 NCBI chr 2:211,418,557...211,526,588
Ensembl chr 2:211,418,623...211,526,587
JBrowse link
G Sh3pxd2a SH3 and PX domains 2A acts_upstream_of_or_within ISO MGI:5636944 (PMID:27996060) RGD PMID:27996060 NCBI chr 1:246,153,660...246,359,806
Ensembl chr 1:246,160,502...246,360,166
JBrowse link
G Sin3a SIN3 transcription regulator family member A acts_upstream_of_or_within ISO MGI:3583656 (PMID:15998811) RGD PMID:15998811 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
JBrowse link
G Slc25a20 solute carrier family 25 member 20 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:4431570 (PMID:27996060)
GO_REF:0000107
RGD
Ensembl
PMID:27996060 GO_REF:0000107 NCBI chr 8:109,365,056...109,386,512
Ensembl chr 8:109,365,002...109,386,512
JBrowse link
G Slc30a1 solute carrier family 30 member 1 acts_upstream_of_or_within ISO MGI:3056498 (PMID:15452870) RGD PMID:15452870 NCBI chr13:103,491,037...103,494,910
Ensembl chr13:103,491,037...103,494,910
JBrowse link
G Slc34a2 solute carrier family 34 member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3841013 (PMID:19233126)
Ensembl
RGD
PMID:19233126 GO_REF:0000107 NCBI chr14:57,910,931...57,930,236
Ensembl chr14:57,910,480...57,930,436
JBrowse link
G Slc39a1 solute carrier family 39 member 1 acts_upstream_of_or_within ISO MGI:2147269|MGI:3625131 (PMID:16652366) RGD PMID:16652366 NCBI chr 2:175,703,413...175,709,063
Ensembl chr 2:175,703,441...175,709,058
JBrowse link
G Slc39a3 solute carrier family 39 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1353474 (PMID:16652366)
Ensembl
RGD
PMID:16652366 GO_REF:0000107 NCBI chr 7:8,676,845...8,682,846
Ensembl chr 7:8,676,759...8,685,149
JBrowse link
G Slc5a7 solute carrier family 5 member 7 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4942035 (PMID:27996060)
Ensembl
RGD
PMID:27996060 GO_REF:0000107 NCBI chr 9:7,595,440...7,626,258
Ensembl chr 9:7,595,444...7,626,258
JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:2179460 (PMID:18829537) RGD PMID:18829537 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO MGI:1201674|MGI:1857692 (PMID:15183723), (PMID:17849440) RGD PMID:15183723 PMID:17849440 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:108051 (PMID:15183723) RGD PMID:15183723 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1858049 (PMID:9420335)
Ensembl
RGD
PMID:9420335 GO_REF:0000107 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2386105|MGI:3605892|MGI:3611933 (PMID:16287714), (PMID:23319608) RGD PMID:16287714 PMID:23319608 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5692712 (PMID:27996060)
Ensembl
RGD
PMID:27996060 GO_REF:0000107 NCBI chr 1:79,988,540...80,011,262
Ensembl chr 1:79,988,612...80,011,254
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176255 (PMID:17881493)
Ensembl
RGD
PMID:17881493 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 acts_upstream_of_or_within ISO MGI:5548688 (PMID:27996060) RGD PMID:27996060 NCBI chr11:83,362,534...83,386,257
Ensembl chr11:83,362,534...83,386,250
JBrowse link
G Sox10 SRY-box transcription factor 10 acts_upstream_of_or_within ISO MGI:98370 (PMID:16790476) RGD PMID:16790476 NCBI chr 7:110,725,274...110,734,651
Ensembl chr 7:110,725,274...110,735,544
JBrowse link
G Sox18 SRY-box transcription factor 18 acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
ISO MGI:1856135|MGI:1856136|MGI:2178809 (PMID:10742113), (PMID:18931657), (PMID:19429912)
MGI:2178809 (PMID:11094083)
RGD PMID:10742113 PMID:11094083 PMID:18931657 PMID:19429912 NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
JBrowse link
G Sox5 SRY-box transcription factor 5 acts_upstream_of_or_within ISO MGI:2447147 (PMID:17084361) RGD PMID:17084361 NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
JBrowse link
G Sox6 SRY-box transcription factor 6 acts_upstream_of_or_within ISO MGI:2447148 (PMID:17084361) RGD PMID:17084361 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:98358 (PMID:16790476)
UniProt
RGD
PMID:16790476 GO_REF:0000024 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
JBrowse link
G Sp2 Sp2 transcription factor acts_upstream_of_or_within ISO MGI:4441277 (PMID:20221402) RGD PMID:20221402 NCBI chr10:81,940,580...81,970,040
Ensembl chr10:81,940,587...81,970,548
JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342
JBrowse link
G Speg striated muscle enriched protein kinase acts_upstream_of_or_within ISO MGI:4830540 (PMID:19118250) RGD PMID:19118250 NCBI chr 9:76,865,714...76,923,170
Ensembl chr 9:76,865,754...76,923,144
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2158696 (PMID:9799237) RGD PMID:9799237 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 acts_upstream_of_or_within ISO MGI:3530159 (PMID:15652482) RGD PMID:15652482 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
JBrowse link
G Ssr2 signal sequence receptor subunit 2 acts_upstream_of_or_within ISO MGI:5637009 (PMID:27996060) RGD PMID:27996060 NCBI chr 2:174,048,291...174,057,043
Ensembl chr 2:174,048,460...174,057,042
JBrowse link
G Stil STIL, centriolar assembly protein acts_upstream_of_or_within ISO MGI:2152962 (PMID:10385121) RGD PMID:10385121 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730
JBrowse link
G Syf2 SYF2 pre-mRNA-splicing factor acts_upstream_of_or_within ISO MGI:3904866 (PMID:22448250) RGD PMID:22448250 NCBI chr 5:147,156,492...147,164,416
Ensembl chr 5:147,156,480...147,164,414
JBrowse link
G Syvn1 synoviolin 1 acts_upstream_of_or_within ISO MGI:2679656 (PMID:15611074) RGD PMID:15611074 NCBI chr 1:203,339,235...203,346,137
Ensembl chr 1:203,339,619...203,346,152
JBrowse link
G Tab1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 acts_upstream_of_or_within ISO MGI:2667182 (PMID:12464436) RGD PMID:12464436 NCBI chr 7:111,675,829...111,707,058
Ensembl chr 7:111,686,371...111,707,058
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in ISO MGI:3606185 (PMID:28893950) RGD PMID:28893950 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376
JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4346764 (PMID:21068316)
Ensembl
RGD
PMID:21068316 GO_REF:0000107 NCBI chr10:90,553,124...90,873,477
Ensembl chr10:90,553,002...90,868,756
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:3710254 (PMID:17473172) RGD PMID:17473172 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:4431951 (PMID:27996060) RGD PMID:27996060 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
JBrowse link
G Tctn1 tectonic family member 1 acts_upstream_of_or_within ISO MGI:3716885 (PMID:16357211) RGD PMID:16357211 NCBI chr12:34,309,795...34,347,190
Ensembl chr12:34,309,897...34,342,267
JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO MGI:106907 (PMID:18083014) RGD PMID:18083014 NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323
JBrowse link
G Tent5c terminal nucleotidyltransferase 5C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5637082 (PMID:27996060)
Ensembl
RGD
PMID:27996060 GO_REF:0000107 NCBI chr 2:187,853,026...187,875,260
Ensembl chr 2:187,853,024...187,894,744
JBrowse link
G Terf2 telomeric repeat binding factor 2 acts_upstream_of_or_within ISO MGI:3619525 (PMID:15968270) RGD PMID:15968270 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819
JBrowse link
G Tgfb3 transforming growth factor, beta 3 acts_upstream_of_or_within ISO MGI:2158731 (PMID:14729481) RGD PMID:14729481 NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 acts_upstream_of_or_within ISO MGI:2386570|MGI:2388050 (PMID:11285230), (PMID:14729481), (PMID:17078885) RGD PMID:11285230 PMID:14729481 PMID:17078885 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2384513 (PMID:10030593), (PMID:18990706)
Ensembl
RGD
PMID:10030593 PMID:18990706 GO_REF:0000107 NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO MGI:3818438 (PMID:17704211) RGD PMID:17704211 NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 acts_upstream_of_or_within ISO MGI:108448 (PMID:11172728) RGD PMID:11172728 NCBI chr 5:132,000,013...132,019,658
Ensembl chr 5:132,000,015...132,019,592
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO MGI:4343479|MGI:4456438 (PMID:20178780) RGD PMID:20178780 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903
JBrowse link
G Tmem100 transmembrane protein 100 acts_upstream_of_or_within ISO MGI:4881485|MGI:5432904|MGI:5432905 (PMID:20848592), (PMID:22783020) RGD PMID:20848592 PMID:22783020 NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
JBrowse link
G Tmem231 transmembrane protein 231 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4284576 (PMID:22179047)
Ensembl
RGD
PMID:22179047 GO_REF:0000107 NCBI chr19:39,883,077...39,904,296
Ensembl chr19:39,883,077...39,904,269
JBrowse link
G Tp53 tumor protein p53 involved_in
NOT|acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101816 (PMID:9425892)
MGI:101816|MGI:1343101|MGI:1924285 (PMID:17325035), (PMID:26334721), (PMID:9288110)
Ensembl
RGD
PMID:9288110 PMID:9425892 PMID:17325035 PMID:26334721 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Tpm1 tropomyosin 1 acts_upstream_of_or_within ISO MGI:2387893 (PMID:9440710) RGD PMID:9440710 NCBI chr 8:67,635,479...67,662,330
Ensembl chr 8:67,635,479...67,662,802
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4840586 (PMID:27996060)
Ensembl
RGD
PMID:27996060 GO_REF:0000107 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within ISO MGI:1928907 (PMID:22442485) RGD PMID:22442485 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO MGI:3810527 (PMID:18776146) RGD PMID:18776146 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874
JBrowse link
G Ttn titin acts_upstream_of_or_within ISO MGI:3654306 (PMID:16702235) RGD PMID:16702235 NCBI chr 3:61,652,432...61,924,912
Ensembl chr 3:61,652,439...61,924,741
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:3038818 (PMID:15030764) RGD PMID:15030764 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
JBrowse link
G Tymp thymidine phosphorylase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 7:120,438,768...120,444,088
Ensembl chr 7:120,438,770...120,443,874
Ensembl chr 7:120,438,770...120,443,874
JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
ISO MGI:102944 (PMID:15169909)
MGI:2450874 (PMID:15169909)
RGD PMID:15169909 NCBI chr  X:116,114,339...116,125,076
Ensembl chr  X:116,113,875...116,125,070
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:102959 (PMID:15169909) RGD PMID:15169909 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665
JBrowse link
G Ubr3 ubiquitin protein ligase E3 component n-recognin 3 acts_upstream_of_or_within ISO MGI:3718505 (PMID:17462990) RGD PMID:17462990 NCBI chr 3:54,649,803...54,806,779
Ensembl chr 3:54,649,992...54,806,247
JBrowse link
G Unk unk zinc finger acts_upstream_of_or_within ISO MGI:4880910 (PMID:27996060) RGD PMID:27996060 NCBI chr10:101,265,732...101,295,950
Ensembl chr10:101,265,703...101,295,967
JBrowse link
G Upb1 beta-ureidopropionase 1 IEP RGD PMID:6870258 RGD:2317093 NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590
JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay acts_upstream_of ISO MGI:6117430 (PMID:27040500) RGD PMID:27040500 NCBI chr16:75,757,442...75,768,478
Ensembl chr16:75,757,441...75,769,345
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked acts_upstream_of_or_within ISO MGI:95387 (PMID:23861879) RGD PMID:23861879 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO MGI:3877328 (PMID:22192413), (PMID:23028370) RGD PMID:22192413 PMID:23028370 NCBI chr  Y:942,838...1,105,313
Ensembl chr  Y:924,168...1,103,422
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931047 (PMID:10229225) RGD PMID:10229225 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA
ISO
GO_REF:0000107
MGI:3613397 (PMID:16244655)
Ensembl
RGD
PMID:16244655 GO_REF:0000107 NCBI chr14:95,378,821...95,455,871
Ensembl chr14:95,378,012...95,455,857
JBrowse link
G Wdr19 WD repeat domain 19 acts_upstream_of_or_within ISO MGI:5315747|MGI:5315748 (PMID:22228095) RGD PMID:22228095 NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288
JBrowse link
G Wdtc1 WD and tetratricopeptide repeats 1 acts_upstream_of_or_within ISO MGI:3774270 (PMID:17767906) RGD PMID:17767906 NCBI chr 5:145,491,460...145,559,631
Ensembl chr 5:145,491,466...145,540,408
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:1857088 (PMID:4819561) RGD PMID:4819561 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:3793280 (PMID:18367557) RGD PMID:18367557 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:16054034) RGD PMID:16054034 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO MGI:3654106 (PMID:16777961) RGD PMID:16777961 NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771 (PMID:9875844) RGD PMID:9875844 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
JBrowse link
G Ybx1 Y box binding protein 1 acts_upstream_of_or_within ISO MGI:2137670|MGI:3581780 (PMID:16954378) RGD PMID:16954378 NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862
JBrowse link
G Ybx3 Y box binding protein 3 acts_upstream_of_or_within ISO MGI:99146 (PMID:16954378) RGD PMID:16954378 NCBI chr 4:165,129,747...165,153,101
Ensembl chr 4:165,129,758...165,153,161
JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:6194737 (PMID:29799838)
Ensembl
RGD
PMID:29799838 GO_REF:0000107 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
JBrowse link
G Zbtb18 zinc finger and BTB domain containing 18 acts_upstream_of_or_within ISO MGI:3851929 (PMID:19409883) RGD PMID:19409883 NCBI chr13:89,439,501...89,447,958
Ensembl chr13:89,439,420...89,448,862
JBrowse link
G Zfand5 zinc finger AN1-type containing 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3526860 (PMID:17143286)
Ensembl
RGD
PMID:17143286 GO_REF:0000107 NCBI chr 1:218,765,735...218,780,391
Ensembl chr 1:218,766,614...218,775,843
JBrowse link
G Zfp335 zinc finger protein 335 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3857418|MGI:4125700 (PMID:23178126)
Ensembl
RGD
PMID:23178126 GO_REF:0000107 NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054
JBrowse link
G Zfp42 zinc finger protein 42 acts_upstream_of_or_within ISO MGI:99187 (PMID:21233130) RGD PMID:21233130 NCBI chr16:48,836,463...48,845,443
Ensembl chr16:48,836,648...48,845,401
JBrowse link
G Zfp568 zinc finger protein 568 involved_in ISO (PMID:28522536) RGD PMID:28522536 NCBI chr 1:85,206,643...85,257,759
Ensembl chr 1:85,207,579...85,257,505
JBrowse link
G Zfpm2 zinc finger protein, multitype 2 acts_upstream_of_or_within ISO MGI:3587413 (PMID:16103912) RGD PMID:16103912 NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205
JBrowse link
G Zmiz1 zinc finger, MIZ-type containing 1 acts_upstream_of_or_within ISO MGI:3769389 (PMID:17967885) RGD PMID:17967885 NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597
JBrowse link
blastocyst development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 acts_upstream_of_or_within ISO RGD MGI:1888635 NCBI chr13:76,786,580...76,807,096
Ensembl chr13:76,786,578...76,807,459
JBrowse link
G Bnip2 BCL2 interacting protein 2 acts_upstream_of_or_within ISO (PMID:19117032) RGD PMID:19117032 NCBI chr 8:70,640,436...70,661,782
Ensembl chr 8:70,640,445...70,675,590
JBrowse link
G Capn2 calpain 2 acts_upstream_of_or_within ISO MGI:3628453 (PMID:16433929) RGD PMID:16433929 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969
JBrowse link
G Cdk11b cyclin-dependent kinase 11B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3043373 (PMID:15060143)
Ensembl
RGD
PMID:15060143 GO_REF:0000107 NCBI chr 5:166,212,761...166,238,883
Ensembl chr 5:166,212,829...166,238,876
JBrowse link
G Cdx2 caudal type homeo box 2 acts_upstream_of_or_within ISO MGI:1857928 (PMID:15788452) RGD PMID:15788452 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
JBrowse link
G Dad1 defender against cell death 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2445490 (PMID:10748466)
Ensembl
RGD
PMID:10748466 GO_REF:0000107 NCBI chr15:27,677,286...27,697,120
Ensembl chr15:27,677,268...27,697,347
JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 acts_upstream_of_or_within ISO MGI:3497714 (PMID:15452149) RGD PMID:15452149 NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478
JBrowse link
G Elf3 E74 like ETS transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16630543)
Ensembl
RGD
PMID:16630543 GO_REF:0000107 NCBI chr13:46,690,460...46,695,394
Ensembl chr13:46,690,466...46,695,481
JBrowse link
G Emg1 EMG1 N1-specific pseudouridine methyltransferase acts_upstream_of_or_within ISO MGI:4839753 (PMID:20858271) RGD PMID:20858271 NCBI chr 4:157,509,258...157,517,540
Ensembl chr 4:157,509,277...157,517,540
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO MGI:3579497 (PMID:15788452) RGD PMID:15788452 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Etv2 ETS variant transcription factor 2 acts_upstream_of_or_within ISO (PMID:16630543) RGD PMID:16630543 NCBI chr 1:85,890,562...85,894,025
Ensembl chr 1:85,890,559...85,893,431
JBrowse link
G G2e3 G2/M-phase specific E3 ubiquitin protein ligase acts_upstream_of_or_within ISO MGI:3808723 (PMID:18511420) RGD PMID:18511420 NCBI chr 6:68,763,847...68,795,305
Ensembl chr 6:68,764,185...68,793,924
JBrowse link
G Gdf9 growth differentiation factor 9 involved_in ISO (PMID:24313324) RGD PMID:24313324 NCBI chr10:37,589,200...37,599,970
Ensembl chr10:37,595,679...37,599,672
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in ISO (PMID:11802795) RGD PMID:11802795 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO (PMID:16880268) RGD PMID:16880268 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Hormad1 HORMA domain containing 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:21079677)
UniProt
RGD
PMID:21079677 GO_REF:0000024 NCBI chr 2:183,115,815...183,152,383
Ensembl chr 2:183,116,716...183,152,383
JBrowse link
G Kpna7 karyopherin subunit alpha 7 acts_upstream_of_or_within ISO MGI:6108355 (PMID:20699224) RGD PMID:20699224 NCBI chr12:9,576,378...9,635,247
Ensembl chr12:9,576,378...9,612,833
JBrowse link
G Med21 mediator complex subunit 21 acts_upstream_of_or_within ISO MGI:2445456 (PMID:10500093) RGD PMID:10500093 NCBI chr 4:179,560,509...179,583,811
Ensembl chr 4:179,560,579...179,567,548
JBrowse link
G N4bp2l2 NEDD4 binding protein 2-like 2 acts_upstream_of_or_within ISO (PMID:18360097) RGD PMID:18360097 NCBI chr12:137,342...200,292
Ensembl chr12:103,590...197,784
JBrowse link
G Nasp nuclear autoantigenic sperm protein involved_in ISS
ISO
GO_REF:0000024
(PMID:16728391)
UniProt
RGD
PMID:16728391 GO_REF:0000024 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
JBrowse link
G Nek2 NIMA-related kinase 2 acts_upstream_of_or_within ISO (PMID:19117032) RGD PMID:19117032 NCBI chr13:103,405,818...103,419,063
Ensembl chr13:103,405,819...103,419,051
JBrowse link
G Nlrp9 NLR family, pyrin domain containing 9 acts_upstream_of_or_within ISO MGI:2675292|MGI:3028627 (PMID:32413845) RGD PMID:32413845 NCBI chr 1:68,291,180...68,341,512
Ensembl chr 1:68,291,180...68,341,512
JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 involved_in ISO (PMID:12714744) RGD PMID:12714744 NCBI chr15:45,722,282...45,729,336
Ensembl chr15:45,722,400...45,729,726
JBrowse link
G Oosp1 oocyte secreted protein 1 acts_upstream_of_or_within ISO MGI:2684943|MGI:2684945 (PMID:32231122) RGD PMID:32231122 NCBI chr 1:208,515,497...208,547,077 JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:21258368) RGD PMID:21258368 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma acts_upstream_of_or_within ISO MGI:2182577 (PMID:12606345) RGD PMID:12606345 NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553
JBrowse link
G Psmc3 proteasome 26S subunit, ATPase 3 acts_upstream_of_or_within ISO MGI:2180548 (PMID:10945464) RGD PMID:10945464 NCBI chr 3:77,031,825...77,037,207
Ensembl chr 3:77,031,825...77,043,358
JBrowse link
G Psmc4 proteasome 26S subunit, ATPase 4 acts_upstream_of_or_within ISO MGI:2180553 (PMID:10945464) RGD PMID:10945464 NCBI chr 1:83,349,127...83,357,497
Ensembl chr 1:83,348,592...83,357,494
JBrowse link
G Rpl13 ribosomal protein L13 acts_upstream_of ISO (PMID:26902285) RGD PMID:26902285 NCBI chr19:51,153,990...51,156,541
Ensembl chr19:51,153,924...51,163,014
JBrowse link
G Rrm2 ribonucleotide reductase regulatory subunit M2 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:26902285)
Ensembl
RGD
PMID:26902285 GO_REF:0000107 NCBI chr 6:41,339,858...41,346,774
Ensembl chr 6:41,340,557...41,346,773
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within ISO MGI:2387974|MGI:2388033 (PMID:11263494), (PMID:11313485) RGD PMID:11263494 PMID:11313485 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Specc1 sperm antigen with calponin homology and coiled-coil domains 1 acts_upstream_of_or_within ISO (PMID:34166821) RGD PMID:34166821 NCBI chr10:46,638,947...46,912,989
Ensembl chr10:46,638,809...46,912,802
JBrowse link
G Spic Spi-C transcription factor acts_upstream_of_or_within ISO (PMID:16630543) RGD PMID:16630543 NCBI chr 7:23,069,815...23,077,517
Ensembl chr 7:23,069,821...23,077,548
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:9921650)
Ensembl
RGD
PMID:9921650 GO_REF:0000107 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (PMID:9921650) RGD PMID:9921650 NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
JBrowse link
G Thoc2 THO complex subunit 2 acts_upstream_of_or_within ISO (PMID:24315442) RGD PMID:24315442 NCBI chr  X:120,634,966...120,749,569
Ensembl chr  X:120,634,968...120,749,513
JBrowse link
G Thoc5 THO complex subunit 5 acts_upstream_of_or_within ISO (PMID:24315442) RGD PMID:24315442 NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718
JBrowse link
G Xab2 XPA binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3574459 (PMID:15725628)
Ensembl
RGD
PMID:15725628 GO_REF:0000107 NCBI chr12:1,667,672...1,679,702
Ensembl chr12:1,667,672...1,679,692
JBrowse link
G Yap1 Yes1 associated transcriptional regulator acts_upstream_of ISO MGI:3056522|MGI:3757577|MGI:4819826 (PMID:26902285) RGD PMID:26902285 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
blastocyst formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin-like 6A acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401
JBrowse link
G Bysl bystin-like acts_upstream_of_or_within ISO (PMID:17242206) RGD PMID:17242206 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within ISO MGI:3050548 (PMID:17784788) RGD PMID:17784788 NCBI chr15:24,014,905...24,031,357
Ensembl chr15:24,014,908...24,028,475
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q61139 (PMID:26416966)
Ensembl
RGD
PMID:26416966 GO_REF:0000107 NCBI chr 1:134,348,142...134,361,182
Ensembl chr 1:134,348,144...134,364,314
JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr11:23,888,586...23,917,612
Ensembl chr11:23,888,815...23,917,605
JBrowse link
G Kdm4c lysine demethylase 4C acts_upstream_of_or_within ISO (PMID:19696013) RGD PMID:19696013 NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818
JBrowse link
G Matr3 matrin 3 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr18:27,154,098...27,193,212
Ensembl chr18:27,163,714...27,193,166
JBrowse link
G Mfn2 mitofusin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:16083859)
Ensembl
RGD
PMID:16083859 GO_REF:0000107 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 7:110,310,810...110,328,653
Ensembl chr 7:110,310,812...110,328,653
JBrowse link
G Mxi1 MAX interactor 1, dimerization protein acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:252,323,915...252,383,682
Ensembl chr 1:252,323,303...252,383,681
JBrowse link
G Nop2 NOP2 nucleolar protein acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 4:157,932,731...157,944,462
Ensembl chr 4:157,932,716...157,944,459
JBrowse link
G Pbrm1 polybromo 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr16:6,213,507...6,312,895
Ensembl chr16:6,213,300...6,311,780
JBrowse link
G Pnldc1 PARN like ribonuclease domain containing exonuclease 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:47,843,224...47,861,675
Ensembl chr 1:47,843,224...47,861,674
JBrowse link
G Ptpn18 protein tyrosine phosphatase, non-receptor type 18 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 9:36,672,325...36,689,963
Ensembl chr 9:36,672,362...36,690,995
JBrowse link
G Rpl7l1 ribosomal protein L7-like 1 acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 9:14,198,101...14,206,119
Ensembl chr 9:14,198,092...14,206,110
JBrowse link
G Rrp7a ribosomal RNA processing 7 homolog A acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 7:114,262,929...114,272,817
Ensembl chr 7:114,256,472...114,272,817
JBrowse link
G Rtn4 reticulon 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:27869233)
Ensembl
RGD
PMID:27869233 GO_REF:0000107 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 9:56,492,403...56,532,300
Ensembl chr 9:56,492,403...56,532,300
JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 acts_upstream_of_or_within ISO (PMID:23211737), (PMID:27869233) RGD PMID:23211737 PMID:27869233 NCBI chr 6:27,826,044...27,835,086
Ensembl chr 6:27,826,029...27,835,156
JBrowse link
G Skil SKI-like proto-oncogene acts_upstream_of_or_within ISO MGI:2387096 (PMID:10811619) RGD PMID:10811619 NCBI chr 2:112,247,047...112,275,176
Ensembl chr 2:112,247,051...112,275,080
JBrowse link
G Supt6h SPT6 homolog, histone chaperone and transcription elongation factor acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780
JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO MGI:3763362 (PMID:18804437) RGD PMID:18804437 NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323
JBrowse link
G Tjp1 tight junction protein 1 acts_upstream_of_or_within ISO (PMID:18423437) RGD PMID:18423437 NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
JBrowse link
G Tm4sf1 transmembrane 4 L six family member 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 2:141,456,950...141,466,146
Ensembl chr 2:141,453,310...141,466,146
JBrowse link
G Txnrd3 thioredoxin reductase 3 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 4:122,072,548...122,112,493
Ensembl chr 4:122,072,548...122,112,491
JBrowse link
G Uspl1 ubiquitin specific peptidase like 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr12:5,823,460...5,850,470
Ensembl chr12:5,823,359...5,850,366
JBrowse link
G Wdr74 WD repeat domain 74 acts_upstream_of_or_within ISO (PMID:21799883), (PMID:27869233) RGD PMID:21799883 PMID:27869233 NCBI chr 1:205,631,769...205,636,558
Ensembl chr 1:205,631,824...205,636,563
JBrowse link
G Zp3 zona pellucida glycoprotein 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:20382503)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20382503 GO_REF:0000024 GO_REF:0000107 NCBI chr12:20,690,547...20,697,513
Ensembl chr12:20,690,547...20,697,513
JBrowse link
blastocyst growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO MGI:101893 (PMID:24036311) RGD PMID:24036311 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Ints1 integrator complex subunit 1 acts_upstream_of_or_within ISO MGI:3663683 (PMID:17544522) RGD PMID:17544522 NCBI chr12:14,861,312...14,886,048
Ensembl chr12:14,861,318...14,886,037
JBrowse link
G Nbn nibrin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:14612522)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:14612522 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO MGI:109345 (PMID:24036311) RGD PMID:24036311 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G Rad51b RAD51 paralog B acts_upstream_of_or_within ISO MGI:3621480 (PMID:10567591) RGD PMID:10567591 NCBI chr 6:98,096,525...98,640,988
Ensembl chr 6:98,098,868...98,640,979
JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) acts_upstream_of_or_within ISO (PMID:24036311) RGD PMID:24036311 NCBI chr 3:106,659,363...106,718,956
Ensembl chr 3:106,659,308...106,718,970
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2386105 (PMID:11163203) RGD PMID:11163203 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Ubtfl1 upstream binding transcription factor like 1 acts_upstream_of_or_within ISO (PMID:19915186) RGD PMID:19915186 NCBI chr 8:15,511,217...15,512,404
Ensembl chr 8:16,073,983...16,075,170
JBrowse link
G Zfp830 zinc finger protein 830 acts_upstream_of_or_within ISO MGI:3583779 (PMID:15988037) RGD PMID:15988037 NCBI chr10:67,701,340...67,702,804
Ensembl chr10:67,701,073...67,704,523
JBrowse link
blastocyst hatching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap3 A-kinase anchoring protein 3 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 4:159,688,049...159,714,067
Ensembl chr 4:159,699,289...159,713,903
JBrowse link
G Ankrd7 ankyrin repeat domain 7 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 4:47,312,270...47,336,754
Ensembl chr 4:47,318,420...47,336,753
JBrowse link
G Arhgdig Rho GDP dissociation inhibitor gamma acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr10:15,219,049...15,221,257
Ensembl chr10:15,219,049...15,221,213
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549
JBrowse link
G Bcor BCL6 co-repressor acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:10,609,756...10,729,613
Ensembl chr  X:10,687,732...10,729,613
JBrowse link
G C9h6orf141 similar to human chromosome 6 open reading frame 141 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 9:20,024,916...20,029,094
Ensembl chr 9:20,024,916...20,029,094
JBrowse link
G Ccdc24 coiled-coil domain containing 24 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 5:131,398,766...131,412,395
Ensembl chr 5:131,408,143...131,412,029
JBrowse link
G Ccdc62 coiled-coil domain containing 62 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr12:32,623,170...32,659,912
Ensembl chr12:32,623,170...32,660,017
JBrowse link
G Cmtm3 CKLF-like MARVEL transmembrane domain containing 3 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr19:622,563...630,721
Ensembl chr19:604,458...629,790
JBrowse link
G Coprs coordinator of PRMT5 and differentiation stimulator acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr16:75,721,264...75,726,375
Ensembl chr16:75,720,061...75,726,375
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Fbll1 fibrillarin-like 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299
JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO (PMID:15901638) RGD PMID:15901638 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Hcfc1 host cell factor C1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:151,687,779...151,712,688
Ensembl chr  X:151,687,779...151,712,638
JBrowse link
G Hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr10:13,781,999...13,788,133
Ensembl chr10:13,781,993...13,788,133
JBrowse link
G Lpar6 lysophosphatidic acid receptor 6 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr15:48,416,548...48,418,357
Ensembl chr15:48,416,544...48,422,331
JBrowse link
G Ndufa2 NADH:ubiquinone oxidoreductase subunit A2 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr18:28,355,774...28,357,863
Ensembl chr18:28,355,774...28,358,076
JBrowse link
G Necab1 N-terminal EF-hand calcium binding protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:27869233)
Ensembl
RGD
PMID:27869233 GO_REF:0000107 NCBI chr 5:28,357,859...28,578,642
Ensembl chr 5:28,357,859...28,578,642
Ensembl chr 5:28,357,859...28,578,642
JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013
JBrowse link
G Phf6 PHD finger protein 6 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:132,656,658...132,699,720
Ensembl chr  X:132,656,672...132,699,127
JBrowse link
G Plpp4 phospholipid phosphatase 4 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:183,829,794...183,959,319
Ensembl chr 1:183,830,409...183,959,319
JBrowse link
G Ppp4r4 protein phosphatase 4, regulatory subunit 4 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 6:122,663,172...122,753,988
Ensembl chr 6:122,663,344...122,753,384
JBrowse link
G Prss29 serine protease 29 acts_upstream_of_or_within ISO MGI:2149951 (PMID:17156484) RGD PMID:17156484 NCBI chr10:14,337,315...14,341,038
Ensembl chr10:14,339,036...14,341,038
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease acts_upstream_of_or_within ISO MGI:3577029 (PMID:15831459) RGD PMID:15831459 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846
JBrowse link
G Slc25a34 solute carrier family 25, member 34 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 5:153,932,081...153,936,854 JBrowse link
G Slc35e2b solute carrier family 35, member E2B acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 5:166,185,166...166,211,055
Ensembl chr 5:166,185,166...166,207,021
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO MGI:2386105 (PMID:11163203) RGD PMID:11163203 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within ISO MGI:2387974|MGI:2388033 (PMID:11263494), (PMID:11313485) RGD PMID:11263494 PMID:11313485 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Smim14 small integral membrane protein 14 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr14:42,783,361...42,829,762
Ensembl chr14:42,783,332...42,829,760
JBrowse link
G St8sia6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr17:76,740,755...76,884,178
Ensembl chr17:76,745,224...76,884,299
JBrowse link
G Stmn3 stathmin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:27869233)
Ensembl
RGD
PMID:27869233 GO_REF:0000107 NCBI chr 3:168,416,810...168,424,946
Ensembl chr 3:168,416,810...168,425,056
JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr12:39,477,181...39,499,633
Ensembl chr12:39,477,568...39,499,628
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:14,421,028...14,433,993
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:141,792,589...141,795,257 JBrowse link
G Tbl1xr1 TBL1X/Y related 1 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 2:104,788,950...104,929,055
Ensembl chr 2:104,801,721...104,929,055
JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr  X:116,114,339...116,125,076
Ensembl chr  X:116,113,875...116,125,070
JBrowse link
G Zbed6 zinc finger, BED-type containing 6 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr13:45,107,253...45,113,524
Ensembl chr13:45,071,718...45,114,009
JBrowse link
G Zfp14 ZFP14 zinc finger protein acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:85,268,649...85,286,125
Ensembl chr 1:85,268,643...85,285,759
JBrowse link
G Zfp420 zinc finger protein 420 acts_upstream_of_or_within ISO (PMID:27869233) RGD PMID:27869233 NCBI chr 1:85,092,810...85,143,682
Ensembl chr 1:85,093,085...85,106,693
Ensembl chr 1:85,093,085...85,106,693
JBrowse link
branching involved in labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin acts_upstream_of_or_within ISO MGI:2176598 (PMID:16981008) RGD PMID:16981008 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2153790 (PMID:9435295) RGD PMID:9435295 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3583769 (PMID:23610556)
Ensembl
RGD
PMID:23610556 GO_REF:0000107 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
G Gcm1 glial cells missing transcription factor 1 acts_upstream_of_or_within ISO MGI:2183479 (PMID:10888880) RGD PMID:10888880 NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924
JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2677457 (PMID:11369229)
Ensembl
RGD
PMID:11369229 GO_REF:0000107 NCBI chr10:100,881,404...100,949,193
Ensembl chr10:100,869,718...100,949,309
JBrowse link
G Il10 interleukin 10 acts_upstream_of_or_within ISO MGI:1857199 (PMID:12842419) RGD PMID:12842419 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO MGI:4331862 (PMID:21606200) RGD PMID:21606200 NCBI chr10:101,050,978...101,086,527
Ensembl chr10:101,051,408...101,086,525
JBrowse link
G Rspo3 R-spondin 3 acts_upstream_of_or_within ISO MGI:3695687 (PMID:16963017) RGD PMID:16963017 NCBI chr 1:28,283,914...28,368,661
Ensembl chr 1:28,283,914...28,367,061
JBrowse link
G Socs3 suppressor of cytokine signaling 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180861 (PMID:11481489)
Ensembl
RGD
PMID:11481489 GO_REF:0000107 NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787
JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within ISO MGI:3709554 (PMID:17174946) RGD PMID:17174946 NCBI chr 3:106,231,082...106,244,121
Ensembl chr 3:106,231,444...106,244,119
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4456438 (PMID:30236446)
Ensembl
RGD
PMID:30236446 GO_REF:0000107 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903
JBrowse link
cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eomes eomesodermin involved_in ISO (PMID:10716450) RGD PMID:10716450 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Gcm1 glial cells missing transcription factor 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2183479 (PMID:10888880)
GO_Central
RGD
PMID:10888880 GO_REF:0000033 NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924
JBrowse link
G Krt19 keratin 19 acts_upstream_of_or_within ISO MGI:96705 (PMID:11062258) RGD PMID:11062258 NCBI chr10:85,075,835...85,080,552
Ensembl chr10:85,066,802...85,171,799
JBrowse link
G Krt8 keratin 8 acts_upstream_of_or_within ISO MGI:96693 (PMID:11062258) RGD PMID:11062258 NCBI chr 7:133,124,203...133,131,656
Ensembl chr 7:133,124,203...133,131,728
JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1929004 (PMID:19786569)
Ensembl
RGD
PMID:19786569 GO_REF:0000107 NCBI chr 7:66,053,209...66,323,292
Ensembl chr 7:66,052,345...66,323,233
JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO MGI:1928487 (PMID:19786569) RGD PMID:19786569 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744
JBrowse link
chorio-allantoic fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp5 bone morphogenetic protein 5 involved_in ISO UniProtKB:P23359 (PMID:10079236) RGD PMID:10079236 NCBI chr 8:76,517,164...76,639,925
Ensembl chr 8:76,517,164...76,639,925
JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO UniProtKB:P49003 (PMID:10079236) RGD PMID:10079236 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO MGI:2446577 (PMID:12446788) RGD PMID:12446788 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO MGI:2151092 (PMID:10021343) RGD PMID:10021343 NCBI chr 4:5,452,683...5,556,679
Ensembl chr 4:5,452,683...5,556,659
JBrowse link
G Erf Ets2 repressor factor acts_upstream_of_or_within ISO MGI:3719472 (PMID:17502352) RGD PMID:17502352 NCBI chr 1:80,829,935...80,838,388
Ensembl chr 1:80,829,935...80,838,388
JBrowse link
G Itga4 integrin subunit alpha 4 acts_upstream_of_or_within ISO MGI:1857206 (PMID:7539359) RGD PMID:7539359 NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:98504 (PMID:10090727)
Ensembl
RGD
PMID:10090727 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:1857452|MGI:2153830 (PMID:7530222), (PMID:7539357) RGD PMID:7530222 PMID:7539357 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:2387443 (PMID:11543617) RGD PMID:11543617 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO MGI:3050540 (PMID:15226444) RGD PMID:15226444 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arnt aryl hydrocarbon receptor nuclear translocator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857680 (PMID:16287860)
Ensembl
RGD
PMID:16287860 GO_REF:0000107 NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580
JBrowse link
G Bptf bromodomain PHD finger transcription factor acts_upstream_of_or_within ISO MGI:3823037 (PMID:18794365) RGD PMID:18794365 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha acts_upstream_of_or_within ISO MGI:88373 (PMID:15509779) RGD PMID:15509779 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:99480 (PMID:15509779)
Ensembl
RGD
PMID:15509779 GO_REF:0000107 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (PMID:16579983) RGD PMID:16579983 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Csf2 colony stimulating factor 2 acts_upstream_of_or_within ISO MGI:1930997 (PMID:19228596) RGD PMID:19228596 NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
JBrowse link
G Egfr epidermal growth factor receptor acts_upstream_of_or_within ISO MGI:1856402 (PMID:7618084) RGD PMID:7618084 NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382
JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:106918 (PMID:16287860)
Ensembl
RGD
PMID:16287860 GO_REF:0000107 NCBI chr 6:7,790,236...7,871,717
Ensembl chr 6:7,790,647...7,871,228
JBrowse link
G Esrrb estrogen-related receptor beta acts_upstream_of_or_within ISO MGI:1857422 (PMID:9285590) RGD PMID:9285590 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Foxd3 forkhead box D3 acts_upstream_of_or_within ISO MGI:2388719 (PMID:16039639) RGD PMID:16039639 NCBI chr 5:114,335,084...114,337,450
Ensembl chr 5:114,335,408...114,336,817
JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO MGI:1857743 (PMID:9043071) RGD PMID:9043071 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2137552|MGI:3706565 (PMID:24855001) RGD PMID:24855001 NCBI chr 6:69,181,429...69,268,045
Ensembl chr 6:69,181,436...69,268,053
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:109169|MGI:2179429 (PMID:16287860)
Ensembl
RGD
PMID:16287860 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hsf1 heat shock transcription factor 1 acts_upstream_of_or_within ISO MGI:2155444 (PMID:10545106) RGD PMID:10545106 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Igf2 insulin-like growth factor 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:12087403)
UniProt
RGD
PMID:12087403 GO_REF:0000024 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018
JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:2684189 (PMID:14500757) RGD PMID:14500757 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Mir127 microRNA 127 acts_upstream_of_or_within ISO MGI:5789789 (PMID:26138477) RGD PMID:26138477 NCBI chr 6:128,546,215...128,546,311
Ensembl chr 6:128,546,215...128,546,311
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:1856970|MGI:2158730 (PMID:11456449) RGD PMID:11456449 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISS
ISO
GO_REF:0000024
(PMID:15084468)
UniProt
RGD
PMID:15084468 GO_REF:0000024 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting involved_in ISO (PMID:20862291) RGD PMID:20862291 NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel acts_upstream_of_or_within
involved_in
ISO MGI:1860840 (PMID:16301212)
(PMID:20862291)
RGD PMID:16301212 PMID:20862291 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO MGI:3605483 (PMID:15750184) RGD PMID:15750184 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
JBrowse link
G Rtl1 retrotransposon-like 1 acts_upstream_of_or_within ISO MGI:3776873 (PMID:26138477), (PMID:28111885) RGD PMID:26138477 PMID:28111885 NCBI chr 6:128,543,904...128,549,384
Ensembl chr 6:128,543,939...128,549,182
JBrowse link
G Slc8a1 solute carrier family 8 member A1 acts_upstream_of_or_within ISO MGI:4849923 (PMID:21302256) RGD PMID:21302256 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628
JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342
JBrowse link
G Spint1 serine peptidase inhibitor, Kunitz type 1 acts_upstream_of_or_within ISO MGI:3581891 (PMID:15964823) RGD PMID:15964823 NCBI chr 3:106,231,082...106,244,121
Ensembl chr 3:106,231,444...106,244,119
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in ISO MGI:3606185 (PMID:28893950) RGD PMID:28893950 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376
JBrowse link
G Tfeb transcription factor EB involved_in ISO (PMID:9806910) RGD PMID:9806910 NCBI chr 9:13,198,890...13,254,726
Ensembl chr 9:13,198,891...13,254,714
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO MGI:4456438 (PMID:20178780) RGD PMID:20178780 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903
JBrowse link
G Ttpa alpha tocopherol transfer protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386172 (PMID:16014812)
Ensembl
RGD
PMID:16014812 GO_REF:0000107 NCBI chr 5:33,497,537...33,518,936
Ensembl chr 5:33,497,137...33,518,073
JBrowse link
embryonic placenta morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1c cyclin-dependent kinase inhibitor 1C acts_upstream_of_or_within ISO MGI:1933758|MGI:3840687 (PMID:19276117) RGD PMID:19276117 NCBI chr 1:198,655,394...198,658,097
Ensembl chr 1:198,655,407...198,658,048
JBrowse link
G Igf2 insulin-like growth factor 2 involved_in ISO (PMID:28522536) RGD PMID:28522536 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:4437211 (PMID:20133625) RGD PMID:20133625 NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489
JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within ISO MGI:1928907 (PMID:22110054) RGD PMID:22110054 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:2153830 (PMID:7530222) RGD PMID:7530222 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958
JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO MGI:2387443 (PMID:11543617) RGD PMID:11543617 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
JBrowse link
G Zfp568 zinc finger protein 568 acts_upstream_of_or_within
involved_in
ISO MGI:3578538 (PMID:21094155)
(PMID:28522536)
RGD PMID:21094155 PMID:28522536 NCBI chr 1:85,206,643...85,257,759
Ensembl chr 1:85,207,579...85,257,505
JBrowse link
epithelial cell morphogenesis involved in placental branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grhl2 grainyhead-like transcription factor 2 acts_upstream_of_or_within ISO MGI:4340678 (PMID:25758223) RGD PMID:25758223 NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
JBrowse link
G Spint2 serine peptidase inhibitor, Kunitz type, 2 acts_upstream_of_or_within ISO MGI:1338881|MGI:2156187 (PMID:19592578) RGD PMID:19592578 NCBI chr 1:84,558,159...84,580,616
Ensembl chr 1:84,558,166...84,580,616
JBrowse link
G St14 ST14 transmembrane serine protease matriptase acts_upstream_of_or_within ISO MGI:1338031 (PMID:19592578) RGD PMID:19592578 NCBI chr 8:29,540,805...29,581,704
Ensembl chr 8:29,540,811...29,581,517
JBrowse link
glycogen cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2675202 (PMID:12783884)
Ensembl
RGD
PMID:12783884 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
inner cell mass cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO (PMID:24036311) RGD PMID:24036311 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857856 (PMID:10518496)
Ensembl
RGD
PMID:10518496 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
JBrowse link
G Nle1 notchless homolog 1 acts_upstream_of_or_within ISO MGI:3624778 (PMID:16611995) RGD PMID:16611995 NCBI chr10:67,834,059...67,844,771
Ensembl chr10:67,834,062...67,842,658
JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 acts_upstream_of_or_within
involved_in
ISO (PMID:20639862), (PMID:21295276)
(PMID:19372391)
RGD PMID:19372391 PMID:20639862 PMID:21295276 NCBI chr20:25,761,042...25,840,926
Ensembl chr20:25,768,120...25,833,052
JBrowse link
inner cell mass cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 acts_upstream_of_or_within ISO MGI:1354386 (PMID:23824537) RGD PMID:23824537 NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640
JBrowse link
G Lats2 large tumor suppressor kinase 2 acts_upstream_of_or_within ISO MGI:1333883 (PMID:23824537) RGD PMID:23824537 NCBI chr15:31,825,068...31,877,193
Ensembl chr15:31,825,092...31,877,220
JBrowse link
G Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO (PMID:24183668) RGD PMID:24183668 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712
JBrowse link
inner cell mass cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1930617 (PMID:9171369)
Ensembl
RGD
PMID:9171369 GO_REF:0000107 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567
JBrowse link
G Brd4 bromodomain containing 4 acts_upstream_of_or_within ISO MGI:2674141 (PMID:11997514) RGD PMID:11997514 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
JBrowse link
G Chek1 checkpoint kinase 1 acts_upstream_of_or_within ISO MGI:1928818 (PMID:10859163) RGD PMID:10859163 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009
JBrowse link
G Cops2 COP9 signalosome subunit 2 acts_upstream_of_or_within ISO MGI:2678281 (PMID:12972599) RGD PMID:12972599 NCBI chr 3:113,084,174...113,110,090
Ensembl chr 3:113,084,176...113,109,947
JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 acts_upstream_of_or_within ISO (PMID:15452149) RGD PMID:15452149 NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478
JBrowse link
G Gins1 GINS complex subunit 1 acts_upstream_of_or_within ISO MGI:3706309 (PMID:16287864) RGD PMID:16287864 NCBI chr 3:139,724,513...139,745,930
Ensembl chr 3:139,724,490...139,745,936
JBrowse link
G Gins4 GINS complex subunit 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5575557 (PMID:24244394)
Ensembl
RGD
PMID:24244394 GO_REF:0000107 NCBI chr16:68,787,572...68,799,938
Ensembl chr16:68,767,339...68,802,273
JBrowse link
G Ints1 integrator complex subunit 1 acts_upstream_of_or_within ISO MGI:3663683 (PMID:17544522) RGD PMID:17544522 NCBI chr12:14,861,312...14,886,048
Ensembl chr12:14,861,318...14,886,037
JBrowse link
G Ncapg2 non-SMC condensin II complex, subunit G2 acts_upstream_of_or_within ISO MGI:3039486 (PMID:14729962) RGD PMID:14729962 NCBI chr 6:137,342,449...137,418,083
Ensembl chr 6:137,342,943...137,415,159
JBrowse link
G Ndel1 nudE neurodevelopment protein 1-like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3589467 (PMID:16107726)
Ensembl
RGD
PMID:16107726 GO_REF:0000107 NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO MGI:3801303 (PMID:20484223) RGD PMID:20484223 NCBI chr 1:176,665,076...176,689,053
Ensembl chr 1:176,665,076...176,688,990
JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor acts_upstream_of_or_within ISO MGI:2450933 (PMID:12556505) RGD PMID:12556505 NCBI chr 2:46,797,853...46,799,621
Ensembl chr 2:46,797,853...46,799,746
JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
JBrowse link
G Sall4 spalt-like transcription factor 4 acts_upstream_of_or_within ISO MGI:3699175 (PMID:16790473) RGD PMID:16790473 NCBI chr 3:157,474,067...157,491,055
Ensembl chr 3:157,474,642...157,490,822
JBrowse link
G Sbds Sbds, ribosome maturation factor acts_upstream_of_or_within ISO MGI:3664792 (PMID:16914746) RGD PMID:16914746 NCBI chr12:26,420,410...26,429,650
Ensembl chr12:26,420,414...26,429,649
JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 acts_upstream_of_or_within ISO MGI:3040431 (PMID:14993285) RGD PMID:14993285 NCBI chr 2:182,898,738...182,930,283
Ensembl chr 2:182,898,738...182,930,506
JBrowse link
G Taf8 TATA-box binding protein associated factor 8 acts_upstream_of_or_within ISO MGI:3033758 (PMID:11076765) RGD PMID:11076765 NCBI chr 9:13,491,892...13,511,713
Ensembl chr 9:13,491,937...13,511,717
JBrowse link
G Zpr1 ZPR1 zinc finger involved_in ISO (PMID:15767679) RGD PMID:15767679 NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719
JBrowse link
inner cell mass cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 acts_upstream_of_or_within ISO MGI:1354386 (PMID:23824537) RGD PMID:23824537 NCBI chr 1:2,160,411...2,193,640
Ensembl chr 1:2,160,411...2,193,640
JBrowse link
G Lats2 large tumor suppressor kinase 2 acts_upstream_of_or_within ISO MGI:1333883 (PMID:23824537) RGD PMID:23824537 NCBI chr15:31,825,068...31,877,193
Ensembl chr15:31,825,092...31,877,220
JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO MGI:3717121 (PMID:21146513) RGD PMID:21146513 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
JBrowse link
labyrinthine layer blood vessel development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2675202 (PMID:12783884)
Ensembl
RGD
PMID:12783884 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO MGI:2446577 (PMID:12446788) RGD PMID:12446788 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
JBrowse link
G Esx1 ESX homeobox 1 acts_upstream_of_or_within ISO MGI:2153820 (PMID:9806555) RGD PMID:9806555 NCBI chr  X:100,449,298...100,454,452 JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3665136 (PMID:16880526)
Ensembl
RGD
PMID:16880526 GO_REF:0000107 NCBI chr12:38,426,466...38,517,076
Ensembl chr12:38,426,444...38,516,424
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177951 (PMID:11092808)
Ensembl
RGD
PMID:11092808 GO_REF:0000107 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
G Ggnbp2 gametogenetin binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4072637 (PMID:26764350)
Ensembl
RGD
PMID:26764350 GO_REF:0000107 NCBI chr10:69,711,527...69,743,134
Ensembl chr10:69,711,532...69,743,365
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:20122914)
Ensembl
RGD
PMID:20122914 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in ISO UniProtKB:Q9QUS4 (PMID:15107403) RGD PMID:15107403 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 involved_in ISO UniProtKB:Q9WV93 (PMID:15107403) RGD PMID:15107403 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within ISO MGI:3715259 (PMID:17405882) RGD PMID:17405882 NCBI chr 9:38,283,502...38,322,684
Ensembl chr 9:38,282,395...38,322,683
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2153821 (PMID:10022836) RGD PMID:10022836 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035
JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 acts_upstream_of_or_within ISO MGI:4331862 (PMID:21606200) RGD PMID:21606200 NCBI chr10:101,050,978...101,086,527
Ensembl chr10:101,051,408...101,086,525
JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3055889 (PMID:14622137)
Ensembl
RGD
PMID:14622137 GO_REF:0000107 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Ncoa6 nuclear receptor coactivator 6 acts_upstream_of_or_within ISO MGI:2445463|MGI:2450859 (PMID:12368298), (PMID:12556486) RGD PMID:12368298 PMID:12556486 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268
JBrowse link
G Nfe2 nuclear factor, erythroid 2 acts_upstream_of_or_within ISO MGI:1857224 (PMID:21558372) RGD PMID:21558372 NCBI chr 7:134,382,758...134,395,364
Ensembl chr 7:134,382,761...134,390,108
JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like acts_upstream_of_or_within ISO MGI:1862021 (PMID:17028112) RGD PMID:17028112 NCBI chr  X:150,775,034...150,807,161
Ensembl chr  X:150,775,080...150,807,142
JBrowse link
G Ovol2 ovo-like zinc finger 2 acts_upstream_of_or_within ISO MGI:3777011 (PMID:17573777) RGD PMID:17573777 NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359
JBrowse link
G Plcd1 phospholipase C, delta 1 acts_upstream_of_or_within ISO MGI:107451 (PMID:16314520) RGD PMID:16314520 NCBI chr 8:118,795,196...118,818,186
Ensembl chr 8:118,795,201...118,818,186
JBrowse link
G Plcd3 phospholipase C, delta 3 acts_upstream_of_or_within ISO MGI:97614 (PMID:16314520) RGD PMID:16314520 NCBI chr10:88,026,707...88,048,080
Ensembl chr10:88,026,740...88,048,296
JBrowse link
G Plg plasminogen involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857291 (PMID:12900459)
Ensembl
RGD
PMID:12900459 GO_REF:0000107 NCBI chr 1:48,325,186...48,367,643
Ensembl chr 1:48,325,185...48,367,786
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (PMID:15466160) RGD PMID:15466160 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO MGI:5905625 (PMID:27917469) RGD PMID:27917469 NCBI chr 7:11,032,931...11,038,917
Ensembl chr 7:11,032,898...11,039,869
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:20178780)
Ensembl
RGD
PMID:20178780 GO_REF:0000107 NCBI chr12:32,052,542...32,061,628
Ensembl chr12:32,052,543...32,071,903
JBrowse link
G Vash1 vasohibin 1 acts_upstream_of_or_within ISO MGI:3846783 (PMID:25184477) RGD PMID:25184477 NCBI chr 6:106,330,374...106,345,740
Ensembl chr 6:106,329,123...106,345,726
JBrowse link
G Vash2 vasohibin 2 acts_upstream_of_or_within ISO MGI:3846784 (PMID:25184477) RGD PMID:25184477 NCBI chr13:102,529,718...102,561,204
Ensembl chr13:102,529,719...102,560,391
JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO MGI:2177935 (PMID:8951051) RGD PMID:8951051 NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
JBrowse link
labyrinthine layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc6 baculoviral IAP repeat-containing 6 acts_upstream_of_or_within ISO MGI:3512417 (PMID:15485903) RGD PMID:15485903 NCBI chr 6:20,722,922...20,916,396
Ensembl chr 6:20,722,922...20,916,434
JBrowse link
G Cdx2 caudal type homeo box 2 acts_upstream_of_or_within ISO MGI:88362 (PMID:19853565) RGD PMID:19853565 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
JBrowse link
G Cdx4 caudal type homeo box 4 acts_upstream_of_or_within ISO MGI:88361 (PMID:19853565) RGD PMID:19853565 NCBI chr  X:68,326,874...68,335,461
Ensembl chr  X:68,326,874...68,335,461
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 acts_upstream_of_or_within ISO MGI:3028946 (PMID:14673158) RGD PMID:14673158 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3690045 (PMID:16966370)
Ensembl
RGD
PMID:16966370 GO_REF:0000107 NCBI chr19:52,867,900...52,907,308
Ensembl chr19:52,869,486...52,907,777
JBrowse link
G Ervfrd-1 endogenous retrovirus group FRD member 1, envelope acts_upstream_of_or_within ISO MGI:3852417 (PMID:19564597) RGD PMID:19564597 NCBI chr12:22,151,211...22,158,264
Ensembl chr12:22,151,211...22,158,264
JBrowse link
G Gab1 GRB2-associated binding protein 1 acts_upstream_of_or_within ISO MGI:1926435 (PMID:10779359) RGD PMID:10779359 NCBI chr19:27,131,262...27,239,236
Ensembl chr19:27,131,262...27,239,236
JBrowse link
G Ggnbp2 gametogenetin binding protein 2 acts_upstream_of_or_within ISO MGI:4072637 (PMID:26764350) RGD PMID:26764350 NCBI chr10:69,711,527...69,743,134
Ensembl chr10:69,711,532...69,743,365
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2178132 (PMID:10209122)
Ensembl
RGD
PMID:10209122 GO_REF:0000107 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Mir127 microRNA 127 acts_upstream_of_or_within ISO MGI:5789789 (PMID:26138477) RGD PMID:26138477 NCBI chr 6:128,546,215...128,546,311
Ensembl chr 6:128,546,215...128,546,311
JBrowse link
G Pcdh12 protocadherin 12 acts_upstream_of_or_within ISO MGI:3512625 (PMID:18477666) RGD PMID:18477666 NCBI chr18:30,103,728...30,119,307
Ensembl chr18:30,103,728...30,119,307
JBrowse link
G Rtl1 retrotransposon-like 1 acts_upstream_of_or_within ISO MGI:3776873 (PMID:26138477), (PMID:28111885) RGD PMID:26138477 PMID:28111885 NCBI chr 6:128,543,904...128,549,384
Ensembl chr 6:128,543,939...128,549,182
JBrowse link
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3832730 (PMID:19090619)
GO_REF:0000107
RGD
Ensembl
PMID:19090619 GO_REF:0000107 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238
JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO MGI:5905625 (PMID:27917469) RGD PMID:27917469 NCBI chr 7:11,032,931...11,038,917
Ensembl chr 7:11,032,898...11,039,869
JBrowse link
G Vash2 vasohibin 2 acts_upstream_of_or_within ISO MGI:3846784 (PMID:25184477) RGD PMID:25184477 NCBI chr13:102,529,718...102,561,204
Ensembl chr13:102,529,719...102,560,391
JBrowse link
labyrinthine layer morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esx1 ESX homeobox 1 acts_upstream_of_or_within ISO MGI:2153820 (PMID:9806555) RGD PMID:9806555 NCBI chr  X:100,449,298...100,454,452 JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within ISO MGI:3769388 (PMID:17961533) RGD PMID:17961533 NCBI chr 5:139,680,670...139,683,588
Ensembl chr 5:139,680,671...139,683,583
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 acts_upstream_of_or_within ISO MGI:1276535 (PMID:20685850) RGD PMID:20685850 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO MGI:1276523 (PMID:20685850) RGD PMID:20685850 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
JBrowse link
negative regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO (PMID:24859262) RGD PMID:24859262 NCBI chr 3:89,808,837...89,836,977
Ensembl chr 3:89,797,880...89,836,973
JBrowse link
G Snai1 snail family transcriptional repressor 1 acts_upstream_of_or_within ISO (PMID:9676199) RGD PMID:9676199 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
JBrowse link
positive regulation of trophectodermal cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csf2 colony stimulating factor 2 involved_in ISO (PMID:16792532), (PMID:24520418) RGD PMID:16792532 PMID:24520418 NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO (PMID:15901638) RGD PMID:15901638 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA
(PMID:24508636)
GO_REF:0000107
RGD
Ensembl
PMID:24508636 GO_REF:0000107 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
regulation of blastocyst development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO MGI:5788002 (PMID:29593216) RGD PMID:29593216 NCBI chr 5:125,254,963...126,534,367
Ensembl chr 5:125,254,956...126,534,367
JBrowse link
G Klf4 KLF transcription factor 4 acts_upstream_of_or_within ISO MGI:6392146 (PMID:29593216) RGD PMID:29593216 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO (PMID:29593216) RGD PMID:29593216 NCBI chr 7:114,619,509...114,648,850
Ensembl chr 7:114,619,508...114,648,761
JBrowse link
G Ttll4 tubulin tyrosine ligase like 4 acts_upstream_of_or_within ISO (PMID:29593216) RGD PMID:29593216 NCBI chr 9:76,221,659...76,258,219
Ensembl chr 9:76,221,796...76,251,301
JBrowse link
regulation of cell differentiation involved in embryonic placenta development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcm1 glial cells missing transcription factor 1 involved_in ISO (PMID:19219068) RGD PMID:19219068 NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924
JBrowse link
G Stk3 serine/threonine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1929004 (PMID:24595170)
Ensembl
RGD
PMID:24595170 GO_REF:0000107 NCBI chr 7:66,053,209...66,323,292
Ensembl chr 7:66,052,345...66,323,233
JBrowse link
G Stk4 serine/threonine kinase 4 acts_upstream_of_or_within ISO MGI:1928487 (PMID:24595170) RGD PMID:24595170 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744
JBrowse link
regulation of spongiotrophoblast cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrk Nik related kinase acts_upstream_of_or_within ISO MGI:5292103 (PMID:21715335) RGD PMID:21715335 NCBI chr  X:102,365,765...102,462,957
Ensembl chr  X:102,365,765...102,459,657
JBrowse link
G Phlda2 pleckstrin homology-like domain, family A, member 2 acts_upstream_of_or_within ISO MGI:2181542 (PMID:26476147) RGD PMID:26476147 NCBI chr 1:198,696,897...198,699,292
Ensembl chr 1:198,696,897...198,697,836
JBrowse link
spongiotrophoblast cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf2 insulin-like growth factor 2 involved_in ISO (PMID:22562201) RGD PMID:22562201 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018
JBrowse link
spongiotrophoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascl2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:2153832 (PMID:9331331) RGD PMID:9331331 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within ISO MGI:3769388 (PMID:17961533) RGD PMID:17961533 NCBI chr 5:139,680,670...139,683,588
Ensembl chr 5:139,680,671...139,683,583
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2137552 (PMID:24855001) RGD PMID:24855001 NCBI chr 6:69,181,429...69,268,045
Ensembl chr 6:69,181,436...69,268,053
JBrowse link
G Lif LIF, interleukin 6 family cytokine acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1201791 (PMID:16258063)
GO_REF:0000107
RGD
Ensembl
PMID:16258063 GO_REF:0000107 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
JBrowse link
G Xist X inactive specific transcript acts_upstream_of_or_within ISO MGI:2445460 (PMID:22573614) RGD PMID:22573614 NCBI chr  X:68,474,987...68,492,500 JBrowse link
spongiotrophoblast layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin acts_upstream_of_or_within ISO MGI:2176598 (PMID:16981008) RGD PMID:16981008 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:12917334) RGD PMID:12917334 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
JBrowse link
G Birc6 baculoviral IAP repeat-containing 6 acts_upstream_of_or_within ISO MGI:3512417 (PMID:15485903) RGD PMID:15485903 NCBI chr 6:20,722,922...20,916,396
Ensembl chr 6:20,722,922...20,916,434
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 acts_upstream_of_or_within ISO MGI:3028946 (PMID:14673158) RGD PMID:14673158 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162
JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3665136 (PMID:16880526)
Ensembl
RGD
PMID:16880526 GO_REF:0000107 NCBI chr12:38,426,466...38,517,076
Ensembl chr12:38,426,444...38,516,424
JBrowse link
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3832730 (PMID:19090619)
GO_REF:0000107
RGD
Ensembl
PMID:19090619 GO_REF:0000107 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238
JBrowse link
G Zfat zinc finger and AT hook domain containing acts_upstream_of_or_within ISO MGI:4829941 (PMID:20660741) RGD PMID:20660741 NCBI chr 7:99,886,954...100,054,288
Ensembl chr 7:99,886,954...100,054,274
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within ISO MGI:3050540 (PMID:15226444) RGD PMID:15226444 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
spongiotrophoblast layer developmental growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plac1 placenta enriched 1 acts_upstream_of_or_within ISO MGI:3808477 (PMID:22729990) RGD PMID:22729990 NCBI chr  X:132,821,347...132,955,143
Ensembl chr  X:132,821,347...132,985,668
JBrowse link
syncytiotrophoblast cell differentiation involved in labyrinthine layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within ISO MGI:2151092 (PMID:21972064) RGD PMID:21972064 NCBI chr 4:5,452,683...5,556,679
Ensembl chr 4:5,452,683...5,556,659
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3583769 (PMID:23610556)
Ensembl
RGD
PMID:23610556 GO_REF:0000107 NCBI chr 9:66,113,096...66,120,276
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
trophectodermal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857117 (PMID:9272950)
Ensembl
RGD
PMID:9272950 GO_REF:0000107 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Bysl bystin-like involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17242206)
Ensembl
RGD
PMID:17242206 GO_REF:0000107 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339
JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:3696711 (PMID:17138661) RGD PMID:17138661 NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
JBrowse link
G Cdx2 caudal type homeo box 2 acts_upstream_of
acts_upstream_of_or_within
ISO (PMID:16325584)
MGI:1857928 (PMID:15788452), (PMID:16325584), (PMID:20404091), (PMID:25397698)
RGD PMID:15788452 PMID:16325584 PMID:20404091 PMID:25397698 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 acts_upstream_of_or_within ISO MGI:2176158 (PMID:16579983) RGD PMID:16579983 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO (PMID:22367759) RGD PMID:22367759 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
JBrowse link
G Cnot2 CCR4-NOT transcription complex, subunit 2 involved_in ISO (PMID:22367759) RGD PMID:22367759 NCBI chr 7:52,130,445...52,222,338
Ensembl chr 7:52,130,441...52,223,575
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 involved_in ISO (PMID:22367759) RGD PMID:22367759 NCBI chr 1:65,555,924...65,572,167
Ensembl chr 1:65,555,924...65,572,167
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component acts_upstream_of_or_within ISO (PMID:24036311) RGD PMID:24036311 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO MGI:101893 (PMID:16325584) RGD PMID:16325584 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Foxd3 forkhead box D3 acts_upstream_of_or_within ISO MGI:2388719 (PMID:16039639) RGD PMID:16039639 NCBI chr 5:114,335,084...114,337,450
Ensembl chr 5:114,335,408...114,336,817
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in ISO (PMID:11802795) RGD PMID:11802795 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
JBrowse link
G Hopx HOP homeobox acts_upstream_of_or_within ISO (PMID:17576768)
MGI:2389233 (PMID:17576768)
RGD PMID:17576768 NCBI chr14:31,055,912...31,082,909
Ensembl chr14:31,075,148...31,082,909
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2153821 (PMID:10022836), (PMID:11456449) RGD PMID:10022836 PMID:11456449 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (PMID:11456449) RGD PMID:11456449 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO MGI:1201683 (PMID:16325584) RGD PMID:16325584 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G Rbm46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (PMID:25397698) RGD PMID:25397698 NCBI chr 2:168,198,324...168,242,011
Ensembl chr 2:168,198,463...168,242,011
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of ISO (PMID:17507372) RGD PMID:17507372 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (PMID:17576768) RGD PMID:17576768 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO MGI:3040993 (PMID:20404091) RGD PMID:20404091 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:3056522|MGI:4819826 (PMID:26902285)
Ensembl
RGD
PMID:26902285 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
trophectodermal cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO (PMID:10742100) RGD PMID:10742100 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO MGI:106907 (PMID:18083014) RGD PMID:18083014 NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323
JBrowse link
trophectodermal cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:15150278)
GO_REF:0000107
RGD
Ensembl
PMID:15150278 GO_REF:0000107 NCBI chr 3:42,815,490...42,892,423
Ensembl chr 3:42,822,610...42,892,327
JBrowse link
G Cops2 COP9 signalosome subunit 2 acts_upstream_of_or_within ISO MGI:2678281 (PMID:12972599) RGD PMID:12972599 NCBI chr 3:113,084,174...113,110,090
Ensembl chr 3:113,084,176...113,109,947
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO (PMID:20708584) RGD PMID:20708584 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Esrrb estrogen-related receptor beta acts_upstream_of_or_within ISO MGI:1857422 (PMID:9285590) RGD PMID:9285590 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Grn granulin precursor acts_upstream_of ISO (PMID:15901638) RGD PMID:15901638 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Zpr1 ZPR1 zinc finger involved_in ISO (PMID:15767679) RGD PMID:15767679 NCBI chr 8:46,564,898...46,574,719
Ensembl chr 8:46,565,146...46,574,719
JBrowse link
trophectodermal cellular morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2651546 (PMID:10500095)
Ensembl
RGD
PMID:10500095 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462
JBrowse link
G Esrrb estrogen-related receptor beta acts_upstream_of_or_within ISO MGI:1857422 (PMID:9285590) RGD PMID:9285590 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:1856970|MGI:2158730 (PMID:11456449) RGD PMID:11456449 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
JBrowse link
trophoblast giant cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cts7 cathepsin 7 acts_upstream_of_or_within ISO (PMID:18776147) RGD PMID:18776147 NCBI chr17:3,388,299...3,424,664
Ensembl chr17:3,388,299...3,393,439
JBrowse link
G E2f7 E2F transcription factor 7 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23064266)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23064266 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:46,150,533...46,192,739
Ensembl chr 7:46,151,293...46,192,734
JBrowse link
G E2f8 E2F transcription factor 8 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:23064266)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23064266 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:98,565,717...98,584,265
Ensembl chr 1:98,565,717...98,584,098
JBrowse link
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of ISO (PMID:24859262) RGD PMID:24859262 NCBI chr 3:89,808,837...89,836,977
Ensembl chr 3:89,797,880...89,836,973
JBrowse link
G Erf Ets2 repressor factor acts_upstream_of_or_within ISO MGI:3719472 (PMID:17502352) RGD PMID:17502352 NCBI chr 1:80,829,935...80,838,388
Ensembl chr 1:80,829,935...80,838,388
JBrowse link
G Gjb5 gap junction protein, beta 5 acts_upstream_of_or_within ISO (PMID:24866916) RGD PMID:24866916 NCBI chr 5:139,680,670...139,683,588
Ensembl chr 5:139,680,671...139,683,583
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:10611232), (PMID:16759287), (PMID:17891141)
(PMID:23911935)
UniProt
RGD
PMID:10611232 PMID:16759287 PMID:17891141 PMID:23911935 GO_REF:0000024 NCBI chr10:42,006,646...42,009,213
Ensembl chr10:42,006,651...42,009,213
JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2137552 (PMID:24855001) RGD PMID:24855001 NCBI chr 6:69,181,429...69,268,045
Ensembl chr 6:69,181,436...69,268,053
JBrowse link
G Lif LIF, interleukin 6 family cytokine acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1201791 (PMID:16258063)
GO_REF:0000107
RGD
Ensembl
PMID:16258063 GO_REF:0000107 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
JBrowse link
G Mdfi MyoD family inhibitor acts_upstream_of_or_within ISO MGI:2155446 (PMID:9799236) RGD PMID:9799236 NCBI chr 9:13,156,806...13,175,218
Ensembl chr 9:13,156,866...13,175,217
JBrowse link
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 acts_upstream_of_or_within ISO MGI:2385933 (PMID:17404209) RGD PMID:17404209 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031
JBrowse link
G Palld pal