in utero embryonic development - Ontology Report

PMID:14729481 PMID:15037318 PMID:17117439

GO_REF:0000107 MGI:2686855 MGI:3043889 MGI:3695845

NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930

Acvr1b

activin A receptor type 1B

MGI:1857710 (MGI:3511374|PMID:15485907), (MGI:3624594|PMID:16564040)

PMID:15485907 PMID:16564040

MGI:3511374 MGI:3624594

NCBI chr 7:142,817,174...142,858,365
Ensembl chr 7:142,817,157...142,860,572

Acvr1c

activin A receptor type 1C

NOT

MGI:3512292 (MGI:3511374|PMID:15485907)

PMID:15485907

MGI:3511374

NCBI chr 3:44,272,859...44,342,501
Ensembl chr 3:44,270,653...44,342,355

Acvrl1

activin A receptor like type 1

MGI:2680088 (MGI:3770582|PMID:17911384)

PMID:17911384

MGI:3770582

NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335

Ada

adenosine deaminase

MGI:1857117 (MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)

PMID:7731963 PMID:9272950

MGI:1095761 MGI:72798

NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947

Adam10

ADAM metallopeptidase domain 10

GO_REF:0000024
(MGI:3522331|PMID:12354787)

PMID:12354787

GO_REF:0000024 MGI:3522331

NCBI chr 8:77,107,355...77,237,483
Ensembl chr 8:77,107,536...77,237,483

Adamts3

ADAM metallopeptidase with thrombospondin type 1, motif 3

MGI:5585728 (MGI:5888818|PMID:27996060)

NCBI chr14:19,866,278...20,072,896
Ensembl chr14:19,866,408...20,070,994

Adar

adenosine deaminase, RNA-specific

MGI:4941203 (MGI:4939544|PMID:21173229)

PMID:21173229

MGI:4939544

NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236

Adcy9

adenylate cyclase 9

MGI:5636912 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr10:11,392,698...11,515,406
Ensembl chr10:11,392,625...11,512,600

Add1

adducin 1

GO_REF:0000107
MGI:3799499 (MGI:3806792|PMID:18723693)

PMID:18723693

GO_REF:0000107 MGI:3806792

NCBI chr14:81,367,466...81,426,610
Ensembl chr14:81,367,468...81,426,496

Alkbh1

alkB homolog 1, histone H2A dioxygenase

IEA

GO_REF:0000107

Ensembl

GO_REF:0000107

NCBI chr 6:111,456,096...111,476,829
Ensembl chr 6:111,456,187...111,477,090

Als2

alsin Rho guanine nucleotide exchange factor ALS2

RGD

PMID:16049005

RGD:1599081

NCBI chr 9:65,961,361...66,034,396
Ensembl chr 9:65,961,346...66,033,871

Amd1

adenosylmethionine decarboxylase 1

MGI:3586494 (MGI:3584197|PMID:11856372)

PMID:11856372

MGI:3584197

NCBI chr20:45,384,000...45,399,694
Ensembl chr20:45,384,000...45,399,694

Amot

angiomotin

MGI:2656627 (MGI:2655854|PMID:12676095)

PMID:12676095

MGI:2655854

NCBI chr X:116,751,231...116,810,238
Ensembl chr X:116,751,230...116,792,864

Angpt1

angiopoietin 1

GO_REF:0000107
MGI:2180145|MGI:99906 (MGI:1930385|PMID:11172728)

PMID:11172728

GO_REF:0000107 MGI:1930385

NCBI chr 7:81,338,327...81,592,459
Ensembl chr 7:81,342,280...81,592,206

Ankrd11

ankyrin repeat domain 11

MGI:3797584 (MGI:3796348|PMID:17986521)

PMID:17986521

MGI:3796348

NCBI chr19:55,703,831...55,862,446
Ensembl chr19:55,703,824...55,737,500

Anks6

ankyrin repeat and sterile alpha motif domain containing 6

MGI:5637085 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 5:62,642,974...62,684,387
Ensembl chr 5:62,640,645...62,683,964

Apba1

amyloid beta precursor protein binding family A member 1

GO_REF:0000107
MGI:1261791|MGI:1888527 (MGI:3691953|PMID:17167098)

PMID:17167098

GO_REF:0000107 MGI:3691953

NCBI chr 1:241,594,565...241,796,512
Ensembl chr 1:241,594,565...241,796,513

Apba2

amyloid beta precursor protein binding family A member 2

MGI:1860297 (MGI:3691953|PMID:17167098)

PMID:17167098

MGI:3691953

NCBI chr 1:125,367,273...125,547,741
Ensembl chr 1:125,367,280...125,548,890

Apba3

amyloid beta precursor protein binding family A member 3

MGI:1860297 (MGI:3691953|PMID:17167098)

PMID:17167098

MGI:3691953

NCBI chr 7:11,314,468...11,319,540
Ensembl chr 7:11,314,424...11,319,516

Apob

apolipoprotein B

MGI:1857625|MGI:2157775 (MGI:1201298|PMID:9502790), (MGI:71076|PMID:7878058)

PMID:7878058 PMID:9502790

MGI:1201298 MGI:71076

NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997

androgen receptor

GO_REF:0000107
MGI:1856319 (MGI:2661993|PMID:10319319)

PMID:10319319

GO_REF:0000107 MGI:2661993

NCBI chr X:67,656,253...67,828,998
Ensembl chr X:67,656,253...67,829,026

Armc5

armadillo repeat containing 5

MGI:6098706 (MGI:5913441|PMID:28169274)
GO_REF:0000107

PMID:28169274

GO_REF:0000107 MGI:5913441

NCBI chr 1:199,655,069...199,662,419
Ensembl chr 1:199,655,660...199,662,427

Arnt2

aryl hydrocarbon receptor nuclear translocator 2

(PMID:12502753)

PMID:12502753

NCBI chr 1:146,399,217...146,556,437
Ensembl chr 1:146,399,217...146,556,171

Ascl2

achaete-scute family bHLH transcription factor 2

MGI:2153832 (MGI:68639|PMID:8090202)

PMID:8090202

MGI:68639

NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409

Atp11a

ATPase phospholipid transporting 11A

MGI:4363953 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr16:81,990,340...82,100,222
Ensembl chr16:81,990,340...82,100,222

Atp7a

ATPase copper transporting alpha

RGD

PMID:10864443

RGD:1599395

NCBI chr X:77,076,085...77,193,644
Ensembl chr X:77,076,106...77,193,644

Axin1

axin 1

MGI:3840236|MGI:3840238|MGI:88276 (MGI:3840033|PMID:19204372)

B9 domain containing 1

MGI:5301332 (MGI:5300833|PMID:22179047)

PMID:22179047

MGI:5300833

NCBI chr10:47,784,294...47,794,399
Ensembl chr10:47,785,033...47,792,590
Ensembl chr10:47,785,033...47,792,590

Bcl2l1

Bcl2-like 1

MGI:2158303 (MGI:1351384|PMID:10618441)

PMID:10618441

MGI:1351384

NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810

Bcl2l11

BCL2 like 11

MGI:97603 (MGI:3760608|PMID:16282979)

PMID:16282979

MGI:3760608

NCBI chr 3:120,726,906...120,764,192
Ensembl chr 3:120,726,906...120,764,192

Bmi1

BMI1 proto-oncogene, polycomb ring finger

MGI:99161 (MGI:1932296|PMID:11290297)

PMID:11290297

MGI:1932296

NCBI chr17:85,360,439...85,370,283
Ensembl chr17:85,364,483...85,368,208

Bmp2

bone morphogenetic protein 2

GO_REF:0000107
MGI:3583785 (MGI:3611958|PMID:16314491)

PMID:16314491

GO_REF:0000107 MGI:3611958

NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318

Bmpr1a

bone morphogenetic protein receptor type 1A

MGI:2158342|MGI:2158390 (MGI:3709795|PMID:17359964)

PMID:17359964

MGI:3709795

NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512

Brk1

BRICK1 subunit of SCAR/WAVE actin nucleating complex

MGI:3872157 (MGI:4839687|PMID:20861187)

PMID:20861187

MGI:4839687

NCBI chr 4:145,559,206...145,574,438
Ensembl chr 4:145,559,206...145,574,438

Btf3

basic transcription factor 3

MGI:3688730 (MGI:75762|PMID:7655515)

PMID:7655515

MGI:75762

NCBI chr 2:28,417,316...28,424,436
Ensembl chr 2:28,417,579...28,423,762

Bysl

bystin-like

MGI:3697441 (MGI:3697044|PMID:17055491)

PMID:17055491

MGI:3697044

NCBI chr 9:15,393,461...15,403,212
Ensembl chr 9:15,393,330...15,403,117

C2cd3

C2 domain containing 3 centriole elongation regulator

(MGI:3821640|PMID:19004860)

PMID:19004860

MGI:3821640

NCBI chr 1:165,382,279...165,480,088
Ensembl chr 1:165,382,690...165,479,655

complement C5

GO_REF:0000107
MGI:88513 (MGI:3833206|PMID:18947875)

PMID:18947875

GO_REF:0000107 MGI:3833206

NCBI chr 3:14,049,993...14,113,931
NCBI chr 3:14,206,466...14,229,141
Ensembl chr 3:14,049,995...14,229,080

complement C6

MGI:88513 (MGI:3833206|PMID:18947875)
GO_REF:0000107

PMID:18947875

GO_REF:0000107 MGI:3833206

NCBI chr 2:54,460,333...54,533,801
Ensembl chr 2:54,466,280...54,533,797

Camsap3

calmodulin regulated spectrin-associated protein family, member 3

MGI:4431915 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr12:2,133,935...2,157,403
Ensembl chr12:2,134,022...2,157,403

Ccm2

CCM2 scaffold protein

MGI:1924696|MGI:3512761 (MGI:3837878|PMID:19151727)

PMID:19151727

MGI:3837878

NCBI chr14:86,812,728...86,859,408
Ensembl chr14:86,813,082...86,859,406

Ccnb1

cyclin B1

MGI:2429976 (MGI:1203433|PMID:9539739)

PMID:9539739

MGI:1203433

NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221

Ccnb2

cyclin B2

MGI:2429974 (MGI:1203433|PMID:9539739)

PMID:9539739

MGI:1203433

NCBI chr 8:76,847,972...76,861,165

Ccnk

cyclin K

MGI:4348808 (MGI:5295306|PMID:22012619)

PMID:22012619

MGI:5295306

NCBI chr 6:132,090,235...132,113,560
Ensembl chr 6:132,090,218...132,113,557

Cdh1

cadherin 1

MGI:2389020 (MGI:3574751|PMID:15775979)

PMID:15775979

MGI:3574751

NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395

Cdk2ap1

cyclin-dependent kinase 2 associated protein 1

MGI:3512185 (MGI:3837115|PMID:19229340)

PMID:19229340

MGI:3837115

NCBI chr12:37,668,369...37,677,067
Ensembl chr12:37,668,369...37,677,063

Celf4

CUGBP, Elav-like family member 4

MGI:4433345 (MGI:5888818|PMID:27996060)

NCBI chr18:17,689,090...18,079,835
Ensembl chr18:17,698,038...17,716,880

Cert1

ceramide transporter 1

MGI:3837565|MGI:5287775 (MGI:3836857|PMID:19139267), (MGI:5888818|PMID:27996060)

PMID:19139267 PMID:27996060

MGI:3836857 MGI:5888818

NCBI chr 2:27,365,145...27,469,797
Ensembl chr 2:27,365,148...27,469,779

Chd7

chromodomain helicase DNA binding protein 7

(PMID:15300250)
MGI:3588650 (MGI:3611161|PMID:16207732)

PMID:15300250 PMID:16207732

MGI:3611161

NCBI chr 5:21,769,087...21,952,036
Ensembl chr 5:21,830,882...21,950,696

Chd8

chromodomain helicase DNA binding protein 8

MGI:3530648 (MGI:3055265|PMID:15367660)

PMID:15367660

MGI:3055265

NCBI chr15:28,612,932...28,672,574
Ensembl chr15:28,612,932...28,672,569

Chst11

carbohydrate sulfotransferase 11

MGI:4363643 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 7:26,641,856...26,890,503
Ensembl chr 7:26,645,422...26,859,716

Chtop

chromatin target of PRMT1

MGI:4842477 (MGI:5888818|PMID:27996060)

NCBI chr 2:189,887,850...189,900,079
Ensembl chr 2:189,887,857...189,899,325

Cir1

corepressor interacting with RBPJ, CIR1

MGI:5577261 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 3:59,994,547...60,023,843
Ensembl chr 3:59,994,181...60,023,913

Cited2

Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2

MGI:2176158 (MGI:3628724|PMID:16579983)

PMID:16579983

MGI:3628724

NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786

Cmip

c-Maf-inducing protein

MGI:5286409 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr19:49,792,273...50,000,535
Ensembl chr19:49,792,273...50,000,535

Cops3

COP9 signalosome subunit 3

MGI:2678261 (MGI:2676527|PMID:12972600)

PMID:12972600

MGI:2676527

NCBI chr10:46,182,680...46,206,083
Ensembl chr10:46,182,687...46,206,135

Coq7

coenzyme Q7, hydroxylase

MGI:2157003|MGI:2158322 (MGI:2154585|PMID:11716496), (MGI:2154595|PMID:11585841)

PMID:11585841 PMID:11716496

MGI:2154585 MGI:2154595

NCBI chr 1:188,176,060...188,190,874
Ensembl chr 1:188,174,874...188,190,860

Cpt2

carnitine palmitoyltransferase 2

MGI:5636913 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 5:127,505,646...127,523,016
Ensembl chr 5:127,505,614...127,523,089

Cr1l

complement C3b/C4b receptor 1 like

MGI:88233 (MGI:3833206|PMID:18947875)

PMID:18947875

MGI:3833206

NCBI chr13:113,824,886...113,872,097
Ensembl chr13:113,824,892...113,872,097

Ctnnb1

catenin beta 1

GO_REF:0000107
MGI:1096327|MGI:2148567 (MGI:3773938|PMID:18231602), (MGI:3840033|PMID:19204372)

PMID:18231602 PMID:19204372

GO_REF:0000107 MGI:3773938 MGI:3840033

NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372

cubilin

RGD

NCBI chr17:80,584,921...80,807,181
Ensembl chr17:80,584,878...80,807,243

Cul3

cullin 3

MGI:2651546 (MGI:1345775|PMID:10500095)

PMID:10500095

MGI:1345775

NCBI chr 9:86,044,485...86,129,066
Ensembl chr 9:86,044,485...86,129,329

Cul4a

cullin 4A

(MGI:2183132|PMID:12077329)

PMID:12077329

MGI:2183132

NCBI chr16:81,718,784...81,756,653
Ensembl chr16:81,719,028...81,756,654

Dab2

DAB adaptor protein 2

MGI:2429678 (MGI:2389502|PMID:12413896)

PMID:12413896

MGI:2389502

NCBI chr 2:55,747,353...55,768,848
Ensembl chr 2:55,747,318...55,768,270

Dbn1

drebrin 1

MGI:5501061 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr17:9,679,511...9,693,878
Ensembl chr17:9,679,628...9,693,820

Dhx35

DEAH-box helicase 35

MGI:5637055 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 3:155,297,545...155,354,857
Ensembl chr 3:155,297,566...155,356,462

Dnaaf2

dynein, axonemal, assembly factor 2

MGI:5532530 (MGI:6358908|PMID:31107948)

PMID:31107948

MGI:6358908

NCBI chr 6:91,481,439...91,490,189
Ensembl chr 6:91,481,954...91,490,366

Dnmt3l

DNA methyltransferase 3 like

GO_REF:0000107
MGI:2447127|MGI:2447128 (MGI:2178074|PMID:11934864)

PMID:11934864

GO_REF:0000107 MGI:2178074

NCBI chr20:11,344,513...11,359,090
Ensembl chr20:11,344,514...11,359,090

Dsc3

desmocollin 3

MGI:3615340 (MGI:3614372|PMID:16418220)

PMID:16418220

MGI:3614372

NCBI chr18:11,753,047...11,789,846
Ensembl chr18:11,753,047...11,789,708

Dusp3

dual specificity phosphatase 3

IDA

RGD

PMID:18035061

RGD:2317890

NCBI chr10:89,904,578...89,918,296
Ensembl chr10:89,904,560...89,918,427

Edn1

endothelin 1

MGI:1857637 (MGI:3510064|PMID:15327783)

PMID:15327783

MGI:3510064

NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324

Ednra

endothelin receptor type A

GO_REF:0000107
(MGI:3510064|PMID:15327783)

PMID:15327783

GO_REF:0000107 MGI:3510064

NCBI chr19:33,928,356...33,991,703
Ensembl chr19:33,928,356...33,991,703

Egfl8

EGF-like-domain, multiple 8

NOT

ISO
ISS

(PMID:15162510)
GO_REF:0000024

RGD
UniProt

PMID:15162510

GO_REF:0000024

NCBI chr20:4,378,205...4,380,959
Ensembl chr20:4,378,206...4,380,600

Eif2s2

eukaryotic translation initiation factor 2 subunit beta

MGI:3838881 (MGI:3838707|PMID:19168544)

PMID:19168544

MGI:3838707

NCBI chr 3:150,391,455...150,412,179
Ensembl chr 3:150,391,460...150,412,179

Eif4e2

eukaryotic translation initiation factor 4E family member 2

MGI:5444035 (MGI:5442247|PMID:22751931)

PMID:22751931

MGI:5442247

NCBI chr 9:94,310,476...94,325,445
Ensembl chr 9:94,307,852...94,336,831

Ell

elongation factor for RNA polymerase II

MGI:1933265 (MGI:1928559|PMID:11118326)

PMID:11118326

MGI:1928559

NCBI chr16:20,594,129...20,641,441
Ensembl chr16:20,594,072...20,641,908

Emx1

empty spiracles homeobox 1

MGI:894681 (MGI:5532214|PMID:23861879)

PMID:23861879

MGI:5532214

NCBI chr 4:116,967,646...116,984,136
Ensembl chr 4:116,968,000...116,985,551

Endog

endonuclease G

MGI:3034030|MGI:3514265 (MGI:3029597|PMID:14663139)

PMID:14663139

MGI:3029597

NCBI chr 3:8,741,833...8,744,414
Ensembl chr 3:8,741,766...8,744,592

Eno1

enolase 1

MGI:3050549 (MGI:1267268|PMID:9626503)

PMID:9626503

MGI:1267268

NCBI chr 5:167,288,223...167,299,610
Ensembl chr 5:167,288,223...167,299,609

Epb41l5

erythrocyte membrane protein band 4.1 like 5

MGI:3822451 (MGI:3821807|PMID:18794329)

PMID:18794329

MGI:3821807

NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968

Epn1

Epsin 1

MGI:1333766 (MGI:4355621|PMID:19666558)
GO_REF:0000107

PMID:19666558

GO_REF:0000107 MGI:4355621

NCBI chr 1:72,294,153...72,310,217
Ensembl chr 1:72,294,153...72,311,856

Epn2

epsin 2

MGI:1333763 (MGI:4355621|PMID:19666558)

PMID:19666558

MGI:4355621

NCBI chr10:47,795,496...47,857,373
Ensembl chr10:47,795,524...47,857,326

Ercc2

ERCC excision repair 2, TFIIH core complex helicase subunit

MGI:3693615|MGI:3696121 (MGI:3692802|PMID:17020410)

PMID:17020410

MGI:3692802

NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344

Erf

Ets2 repressor factor

MGI:3719472 (MGI:3718929|PMID:17502352)

PMID:17502352

MGI:3718929

NCBI chr 1:82,112,449...82,120,902
Ensembl chr 1:82,112,449...82,120,902

Esrrb

estrogen-related receptor beta

MGI:1857422 (MGI:1095811|PMID:9285590)

PMID:9285590

MGI:1095811

NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906

Etnk2

ethanolamine kinase 2

MGI:3526407 (MGI:3695773|PMID:16861741)

PMID:16861741

MGI:3695773

NCBI chr13:50,481,178...50,498,991
Ensembl chr13:50,481,163...50,499,140

Etv2

ETS variant transcription factor 2

MGI:4415819 (MGI:4415813|PMID:18462699)

PMID:18462699

MGI:4415813

NCBI chr 1:89,091,239...89,094,570
Ensembl chr 1:89,091,239...89,094,530

Exoc3l2

exocyst complex component 3-like 2

MGI:5548646 (MGI:5888818|PMID:27996060)

NCBI chr 1:80,372,708...80,404,275
Ensembl chr 1:80,383,050...80,404,290

Fgfr1

Fibroblast growth factor receptor 1

MGI:95523 (MGI:3719293|PMID:17687036)

PMID:17687036

MGI:3719293

NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449

Fgfr2

fibroblast growth factor receptor 2

MGI:2153790|MGI:95522 (MGI:1197797|PMID:9435295), (MGI:3719293|PMID:17687036)

PMID:9435295 PMID:17687036

MGI:1197797 MGI:3719293

NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928

Fkbp10

FKBP prolyl isomerase 10

MGI:5432211 (MGI:5585367|PMID:24777781)

PMID:24777781

MGI:5585367

NCBI chr10:88,326,337...88,338,199
Ensembl chr10:88,326,080...88,338,207

Flcn

folliculin

GO_REF:0000024
MGI:4348628 (MGI:5050037|PMID:21258407)

PMID:21258407

GO_REF:0000024 MGI:5050037

NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309

Flvcr1

FLVCR heme transporter 1

MGI:3776021 (MGI:3775000|PMID:18258918)

PMID:18258918

MGI:3775000

NCBI chr13:109,624,167...109,629,609
Ensembl chr13:109,578,074...109,629,482

Fosl1

FOS like 1, AP-1 transcription factor subunit

MGI:2385824 (MGI:1926238|PMID:11044407)

PMID:11044407

MGI:1926238

NCBI chr 1:220,826,560...220,835,066
Ensembl chr 1:220,826,560...220,835,066

Foxa2

forkhead box A2

(MGI:87010|PMID:9152011)

PMID:9152011

MGI:87010

NCBI chr 3:142,383,084...142,387,493
Ensembl chr 3:142,383,278...142,387,481

Foxc1

forkhead box C1

MGI:1856705 (MGI:53909|PMID:4819561)

PMID:4819561

MGI:53909

NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484

Foxd3

forkhead box D3

GO_REF:0000024
(MGI:2388404|PMID:12381664)

PMID:12381664

GO_REF:0000024 MGI:2388404

NCBI chr 5:118,346,283...118,349,120

Foxf1

forkhead box F1

(PMID:19500772)
MGI:1929432 (MGI:1928688|PMID:11124112), (MGI:2135612|PMID:11493558)

PMID:11124112 PMID:11493558 PMID:19500772

MGI:1928688 MGI:2135612

NCBI chr19:53,012,306...53,016,100
Ensembl chr19:53,012,332...53,016,086

Foxp1

forkhead box P1

MGI:4829787 (MGI:4829405|PMID:20713518)

PMID:20713518

MGI:4829405

NCBI chr 4:131,362,178...131,963,466
Ensembl chr 4:131,366,744...131,694,755

Gabpa

GA binding protein transcription factor subunit alpha

MGI:3665313 (MGI:3712367|PMID:17485447)

PMID:17485447

MGI:3712367

NCBI chr11:24,293,845...24,322,822
Ensembl chr11:24,263,281...24,322,815

Gata1

GATA binding protein 1

MGI:2429992 (MGI:1203270|PMID:9576834)

PMID:9576834

MGI:1203270

NCBI chr X:15,273,937...15,281,759
Ensembl chr X:15,378,789...15,382,066

Gata3

GATA binding protein 3

MGI:3696958 (MGI:4821481|PMID:20702712)

PMID:20702712

MGI:4821481

NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681

Gata4

GATA binding protein 4

PMID:9136932 PMID:9136933 PMID:15310850 PMID:20123909

MGI:3052615 MGI:4422111 MGI:87488 MGI:87489

NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965

Gata6

GATA binding protein 6

GO_REF:0000107
MGI:2177785|MGI:3793425 (MGI:1315079|PMID:9832509), (MGI:4422111|PMID:20123909)

PMID:9832509 PMID:20123909

GO_REF:0000107 MGI:1315079 MGI:4422111

NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338

Gatad2a

GATA zinc finger domain containing 2A

(MGI:3762244|PMID:17565372)

PMID:17565372

MGI:3762244

NCBI chr16:21,177,793...21,267,768
Ensembl chr16:21,178,138...21,268,504

Gdf1

growth differentiation factor 1

MGI:2181719 (MGI:3763867|PMID:17936261)

PMID:17936261

MGI:3763867

NCBI chr16:20,845,580...20,860,789
Ensembl chr16:20,845,576...20,860,767

Gdf3

growth differentiation factor 3

MGI:3612535|MGI:3764814|MGI:95683 (MGI:3611720|PMID:16368929), (MGI:3763867|PMID:17936261)

PMID:16368929 PMID:17936261

MGI:3611720 MGI:3763867

NCBI chr 4:155,417,667...155,422,014
Ensembl chr 4:155,417,004...155,421,998

Gja1

gap junction protein, alpha 1

MGI:1857177 (MGI:1201220|PMID:9486664)

PMID:9486664

MGI:1201220

NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089

Gjb3

gap junction protein, beta 3

RGD

PMID:9291584

RGD:1599752

NCBI chr 5:145,390,590...145,397,271
Ensembl chr 5:145,391,311...145,392,123

Gli2

GLI family zinc finger 2

MGI:3834146 (MGI:3833793|PMID:19056373)

PMID:19056373

MGI:3833793

NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444

Gli3

GLI family zinc finger 3

MGI:1856276 (MGI:3692156|PMID:16254602)

PMID:16254602

MGI:3692156

NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036

Gna12

G protein subunit alpha 12

MGI:95768 (MGI:2182490|PMID:12077299)

PMID:12077299

MGI:2182490

NCBI chr12:15,890,202...15,971,212
Ensembl chr12:15,890,170...15,971,212

Gna13

G protein subunit alpha 13

MGI:95767 (MGI:2182490|PMID:12077299)

PMID:12077299

MGI:2182490

NCBI chr10:97,647,196...97,680,030
Ensembl chr10:97,647,111...97,684,730

Gpi

glucose-6-phosphate isomerase

MGI:1932543 (MGI:51569|PMID:1582174)

PMID:1582174

MGI:51569

NCBI chr 1:90,063,411...90,091,287
Ensembl chr 1:90,063,411...90,091,287

Grhl2

grainyhead-like transcription factor 2

MGI:4331210 (MGI:4947318|PMID:21262862)

PMID:21262862

MGI:4947318

NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856

Grin2b

glutamate ionotropic receptor NMDA type subunit 2B

MGI:1928295 (MGI:894616|PMID:9147327)

PMID:9147327

MGI:894616

NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873

H19

H19, imprinted maternally expressed transcript (non-protein coding)

IMP

RGD

PMID:18778817

RGD:5509951

NCBI chr 1:215,744,404...215,747,080

Hand1

heart and neural crest derivatives expressed 1

MGI:2153823 (MGI:1197800|PMID:9500551)

PMID:9500551

MGI:1197800

NCBI chr10:43,250,729...43,253,296
Ensembl chr10:43,250,745...43,253,296

Hand2

heart and neural crest derivatives expressed 2

GO_REF:0000107
MGI:1857639 (MGI:892134|PMID:9171826)

PMID:9171826

GO_REF:0000107 MGI:892134

NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546

Hba-a1

hemoglobin alpha, adult chain 1

RefSeq:NP_001077424 (MGI:76010|PMID:7550311)

PMID:7550311

MGI:76010

NCBI chr10:15,602,794...15,603,649
Ensembl chr10:15,602,794...15,603,649

Hba-a2

hemoglobin alpha, adult chain 2

UniProtKB:P01942 (MGI:76010|PMID:7550311)

PMID:7550311

MGI:76010

NCBI chr10:15,589,364...15,590,207
Ensembl chr10:15,589,364...15,590,220

Hcn4

hyperpolarization activated cyclic nucleotide-gated potassium channel 4

MGI:2684538 (MGI:2682533|PMID:14657344)

PMID:14657344

MGI:2682533

NCBI chr 8:63,599,907...63,637,327
Ensembl chr 8:63,600,663...63,639,654

Heg1

heart development protein with EGF-like domains 1

MGI:2384924|MGI:3838392 (MGI:3837878|PMID:19151727)

PMID:19151727

MGI:3837878

NCBI chr11:70,234,248...70,322,966
Ensembl chr11:70,236,888...70,322,690

Hes1

hes family bHLH transcription factor 1

MGI:104877 (MGI:2149154|PMID:11500373)

PMID:11500373

MGI:2149154

NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248

Hes3

hes family bHLH transcription factor 3

MGI:104853 (MGI:2149154|PMID:11500373)

PMID:11500373

MGI:2149154

NCBI chr 5:169,463,196...169,469,795
Ensembl chr 5:169,464,989...169,467,153

Hhex

hematopoietically expressed homeobox

MGI:4999724 (MGI:4950786|PMID:21445260)

PMID:21445260

MGI:4950786

NCBI chr 1:256,101,994...256,107,581
Ensembl chr 1:256,101,903...256,107,649

Hinfp

histone H4 transcription factor

(MGI:3851835|PMID:19590016)

PMID:19590016

MGI:3851835

NCBI chr 8:48,626,398...48,638,012
Ensembl chr 8:48,628,340...48,634,797

Hm13

histocompatibility minor 13

MGI:5637209 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 3:148,150,695...148,189,623
Ensembl chr 3:148,150,698...148,189,623

Hsd17b2

hydroxysteroid (17-beta) dehydrogenase 2

GO_REF:0000107
MGI:3773836 (MGI:3773501|PMID:18048640)

PMID:18048640

GO_REF:0000107 MGI:3773501

NCBI chr19:50,246,404...50,317,892
Ensembl chr19:50,246,402...50,317,891

Hsf1

heat shock transcription factor 1

MGI:2155444 (MGI:1347429|PMID:10545106)

PMID:10545106

MGI:1347429

NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478

Icmt

isoprenylcysteine carboxyl methyltransferase

MGI:2183607|MGI:2680650 (MGI:1930897|PMID:11121396), (MGI:2182507|PMID:12105862)

PMID:11121396 PMID:12105862

MGI:1930897 MGI:2182507

NCBI chr 5:169,475,270...169,482,031
Ensembl chr 5:169,475,270...169,482,030

Ifitm5

interferon induced transmembrane protein 5

(MGI:5607401|PMID:20838829)

PMID:20838829

MGI:5607401

NCBI chr 1:213,743,331...213,749,879
Ensembl chr 1:213,744,796...213,745,748

insulin-like growth factor 2

(MGI:5908476|PMID:28522536)

PMID:28522536

MGI:5908476

NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911

Ihh

Indian hedgehog signaling molecule

(MGI:3766861|PMID:17881493)

PMID:17881493

MGI:3766861

NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440

Inpp5b

inositol polyphosphate-5-phosphatase B

MGI:109589 (MGI:4440378|PMID:20195868)

PMID:20195868

MGI:4440378

NCBI chr 5:142,731,767...142,796,305
Ensembl chr 5:142,731,767...142,796,305

Inpp5k

inositol polyphosphate-5-phosphatase K

MGI:3810936 (MGI:3810008|PMID:18573875)

PMID:18573875

MGI:3810008

NCBI chr10:63,775,639...63,796,879
Ensembl chr10:63,776,378...63,795,899

Insl3

insulin-like 3

MGI:2661997 (MGI:2661993|PMID:10319319)

PMID:10319319

MGI:2661993

NCBI chr16:20,120,753...20,122,702
Ensembl chr16:20,121,352...20,122,696

Itgb1

integrin subunit beta 1

GO_REF:0000107
MGI:2154539 (MGI:75950|PMID:7544313)

PMID:7544313

GO_REF:0000107 MGI:75950

NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535

Jag2

jagged canonical Notch ligand 2

GO_REF:0000107
MGI:2657215 (MGI:1202245|PMID:9531541)

PMID:9531541

GO_REF:0000107 MGI:1202245

NCBI chr 6:137,711,144...137,733,331
Ensembl chr 6:137,711,155...137,733,026

Junb

JunB proto-oncogene, AP-1 transcription factor subunit

MGI:2153821 (MGI:1332277|PMID:10022836)

PMID:10022836

MGI:1332277

NCBI chr19:26,092,972...26,094,756
Ensembl chr19:26,092,974...26,094,756

Kat2a

lysine acetyltransferase 2A

MGI:2386279|MGI:3711317 (MGI:3709911|PMID:17325035)

PMID:17325035

MGI:3709911

NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537

Kdm2a

lysine demethylase 2A

(MGI:5615026|PMID:25463925)

PMID:25463925

MGI:5615026

NCBI chr 1:219,566,130...219,642,294
Ensembl chr 1:219,566,156...219,640,294

Kdm6a

lysine demethylase 6A

MGI:4126347|MGI:5448825|MGI:5516011 (MGI:5448135|PMID:22949634), (MGI:5515940|PMID:23028370)

PMID:22949634 PMID:23028370

MGI:5448135 MGI:5515940

NCBI chr X:4,805,493...4,945,788
Ensembl chr X:4,806,277...4,945,944

Keap1

Kelch-like ECH-associated protein 1

MGI:2681416 (MGI:3040741|PMID:15087497)
GO_REF:0000107

PMID:15087497

GO_REF:0000107 MGI:3040741

NCBI chr 8:22,250,518...22,259,868
Ensembl chr 8:22,250,518...22,259,779

Kidins220

kinase D-interacting substrate 220

GO_REF:0000107
MGI:4820793 (MGI:4819946|PMID:19449316)

PMID:19449316

GO_REF:0000107 MGI:4819946

NCBI chr 6:44,225,142...44,322,938
Ensembl chr 6:44,225,233...44,322,938

Kif3a

kinesin family member 3a

MGI:1329045 (MGI:3841503|PMID:19286674)

PMID:19286674

MGI:3841503

NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785

Kifbp

kinesin family binding protein

MGI:4939684 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr20:32,191,731...32,211,295
Ensembl chr20:32,191,734...32,211,453

Klf1

Kruppel like factor 1

MGI:1857557 (MGI:73364|PMID:7753194)

PMID:7753194

MGI:73364

NCBI chr19:26,016,289...26,019,557
Ensembl chr19:26,016,382...26,019,553

Klf2

Kruppel-like factor 2

MGI:3047647 (MGI:1316583|PMID:9859212), (MGI:3701918|PMID:15947087)

PMID:9859212 PMID:15947087

MGI:1316583 MGI:3701918

NCBI chr16:19,223,087...19,225,037
Ensembl chr16:19,223,087...19,225,037

Kmt2d

lysine methyltransferase 2D

MGI:3623309 (MGI:3621091|PMID:16540515)

PMID:16540515

MGI:3621091

NCBI chr 7:140,507,137...140,542,479
Ensembl chr 7:140,489,492...140,546,908

Lig4

DNA ligase 4

MGI:1857720|MGI:1857732 (MGI:1312981|PMID:9823897), (MGI:1860400|PMID:10911993), (MGI:3652689|PMID:16777961)

PMID:9823897 PMID:10911993 PMID:16777961

MGI:1312981 MGI:1860400 MGI:3652689

NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769

LOC100912427

nuclease-sensitive element-binding protein 1-like

MGI:2137670|MGI:3581780 (MGI:3692516|PMID:16954378)

PMID:16954378

MGI:3692516

NCBI chr 1:186,635,408...186,641,503
Ensembl chr 1:186,640,425...186,641,393

LOC361985

similar to NICE-3

MGI:4432969 (MGI:5888818|PMID:27996060)

NCBI chr 2:189,400,696...189,413,614
Ensembl chr 2:189,400,696...189,413,608

LOC686013

hypothetical protein LOC686013

MGI:5289829 (MGI:5888818|PMID:27996060)

NCBI chr19:25,122,870...25,126,960
Ensembl chr19:25,123,724...25,127,145

Lrp1b

LDL receptor related protein 1B

MGI:4459742|MGI:4459800 (MGI:4453528|PMID:20383322)

PMID:20383322

MGI:4453528

NCBI chr 3:25,201,194...27,348,126

Ly6e

lymphocyte antigen 6 family member E

MGI:2429638 (MGI:2157257|PMID:11784869)

PMID:11784869

MGI:2157257

NCBI chr 7:116,355,426...116,359,862
Ensembl chr 7:116,355,698...116,359,862

Maff

MAF bZIP transcription factor F

MGI:1858732|MGI:96911 (MGI:3040741|PMID:15087497)

PMID:15087497

MGI:3040741

NCBI chr 7:120,580,743...120,592,095
Ensembl chr 7:120,580,743...120,592,095

Mafg

MAF bZIP transcription factor G

MGI:1858732 (MGI:3040741|PMID:15087497)

PMID:15087497

MGI:3040741

NCBI chr10:109,802,877...109,811,476
Ensembl chr10:109,806,159...109,811,323

Man2a1

mannosidase, alpha, class 2A, member 1

MGI:2150656 (MGI:3652665|PMID:16754854)

PMID:16754854

MGI:3652665

NCBI chr 9:112,293,388...112,451,677
Ensembl chr 9:112,293,388...112,451,677

Mapk8ip3

mitogen-activated protein kinase 8 interacting protein 3

MGI:3527900 (MGI:3796918|PMID:18324732)

PMID:18324732

MGI:3796918

NCBI chr10:14,259,394...14,299,276
Ensembl chr10:14,260,787...14,299,167

Mbd3

methyl-CpG binding domain protein 3

MGI:2388006 (MGI:3700848|PMID:17287250)

PMID:17287250

MGI:3700848

NCBI chr 7:12,179,046...12,186,251
Ensembl chr 7:12,179,203...12,186,656

Mbnl1

muscleblind-like splicing regulator 1

(PMID:12915312)

PMID:12915312

NCBI chr 2:150,698,248...150,867,791
Ensembl chr 2:150,756,185...150,869,690

Mecom

MDS1 and EVI1 complex locus

MGI:2158381 (MGI:3686680|PMID:17029558)

PMID:17029558

MGI:3686680

NCBI chr 2:117,396,084...117,993,604
Ensembl chr 2:117,396,007...117,454,769

Med1

mediator complex subunit 1

MGI:2684189 (MGI:2682174|PMID:14500757)

PMID:14500757

MGI:2682174

NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880

Mgat1

alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

MGI:1857564 (MGI:64564|PMID:8290590)

PMID:8290590

MGI:64564

NCBI chr10:34,518,392...34,537,214
Ensembl chr10:34,519,790...34,537,210

Mib1

MIB E3 ubiquitin protein ligase 1

MGI:3603514 (MGI:3603078|PMID:16000382)

PMID:16000382

MGI:3603078

NCBI chr18:1,970,914...2,094,920
Ensembl chr18:1,970,914...2,094,920

Mir106b

microRNA 106b

MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372)

NCBI chr12:19,307,752...19,307,833
Ensembl chr12:19,307,752...19,307,833

Mir17

microRNA 17

MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372)

NCBI chr15:100,179,879...100,179,962
Ensembl chr15:100,179,879...100,179,962

Mir18a

microRNA 18a

MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372)

NCBI chr15:100,180,015...100,180,110
Ensembl chr15:100,180,015...100,180,110

Mir19a

microRNA 19a

MGI:2676844|MGI:2676872|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372)

NCBI chr15:100,180,162...100,180,243
Ensembl chr15:100,180,162...100,180,243

Mir19b1

microRNA 19b-1

MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629918 (MGI:3789916|PMID:18329372)

NCBI chr15:100,180,464...100,180,550
Ensembl chr15:100,180,464...100,180,550

Mir20a

microRNA 20a

MGI:2676844|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372)

NCBI chr15:100,180,334...100,180,418
Ensembl chr15:100,180,334...100,180,418

Mir25

microRNA 25

MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619439|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372)

NCBI chr12:19,307,340...19,307,423
Ensembl chr12:19,307,340...19,307,423

Mir92a1

microRNA 92a-1

MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3619439|MGI:3629917 (MGI:3789916|PMID:18329372)

NCBI chr15:100,180,586...100,180,663
Ensembl chr15:100,180,586...100,180,663

Mir93

microRNA 93

MGI:2676844|MGI:2676872|MGI:3618743|MGI:3619060|MGI:3619065|MGI:3619266|MGI:3629917|MGI:3629918 (MGI:3789916|PMID:18329372)

NCBI chr12:19,307,543...19,307,629
Ensembl chr12:19,307,543...19,307,629

Mrtfb

myocardin related transcription factor B

MGI:3587937 (MGI:3695837|PMID:17183527)

PMID:17183527

MGI:3695837

NCBI chr10:1,151,163...1,273,269

Msh2

mutS homolog 2

NOT

GO_REF:0000107
MGI:98834 (MGI:1096207|PMID:9288110)
MGI:98834 (MGI:1101752|PMID:9425892)

PMID:9288110 PMID:9425892

GO_REF:0000107 MGI:1096207 MGI:1101752

NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932

Msx1

msh homeobox 1

MGI:1926386 (MGI:3720542|PMID:17601530)

PMID:17601530

MGI:3720542

NCBI chr14:77,712,262...77,716,061
Ensembl chr14:77,712,240...77,716,059

Mt-nd4

mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4

RGD

PMID:17307910

RGD:2302308

NCBI chr MT:10,160...11,537
Ensembl chr MT:10,160...11,537

Mtss1

MTSS I-BAR domain containing 1

MGI:105373 (MGI:5317250|PMID:21406566)

PMID:21406566

MGI:5317250

NCBI chr 7:98,820,799...98,960,878
Ensembl chr 7:98,820,812...98,960,837

Muc1

mucin 1, cell surface associated

RGD

PMID:21263748

RGD:7349384

NCBI chr 2:188,543,137...188,547,874
Ensembl chr 2:188,543,137...188,547,874

Myb

MYB proto-oncogene, transcription factor

MGI:2662859|MGI:3047076 (MGI:1346939|PMID:10523863), (MGI:3763573|PMID:17927961)

PMID:10523863 PMID:17927961

MGI:1346939 MGI:3763573

NCBI chr 1:16,658,178...16,690,135
Ensembl chr 1:16,659,442...16,687,817

Mybphl

myosin binding protein H-like

MGI:5548569 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 2:211,158,902...211,173,036
Ensembl chr 2:211,159,062...211,173,786

Myc

MYC proto-oncogene, bHLH transcription factor

RGD

PMID:23077551

RGD:7207883

NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240

Myh10

myosin heavy chain 10

MGI:2386445|MGI:3052104 (MGI:1099556|PMID:9356462), (MGI:1933038|PMID:11283949), (MGI:3052228|PMID:12893741)

PMID:9356462 PMID:11283949 PMID:12893741

MGI:1099556 MGI:1933038 MGI:3052228

NCBI chr10:55,274,910...55,406,738
Ensembl chr10:55,275,411...55,406,732

Myh6

myosin heavy chain 6

GO_REF:0000107
MGI:3652543 (MGI:83539|PMID:8878443)

PMID:8878443

GO_REF:0000107 MGI:83539

NCBI chr15:33,605,653...33,629,730
Ensembl chr15:33,605,654...33,629,699

Myh9

myosin, heavy chain 9

MGI:3511350|MGI:3641195 (MGI:3510592|PMID:15555549), (MGI:3640226|PMID:16630581)

PMID:15555549 PMID:16630581

MGI:3510592 MGI:3640226

NCBI chr 7:118,740,005...118,792,507
Ensembl chr 7:118,741,110...118,792,625

Myo18b

myosin XVIIIb

MGI:3829997 (MGI:3821523|PMID:18761673)

PMID:18761673

MGI:3821523

NCBI chr12:49,761,100...49,979,745
Ensembl chr12:49,761,120...49,979,758

Myo1e

myosin IE

GO_REF:0000107
MGI:3526864 (MGI:3696608|PMID:17143286)

PMID:17143286

GO_REF:0000107 MGI:3696608

NCBI chr 8:76,644,715...76,840,240
Ensembl chr 8:76,754,492...76,839,593

N4bp2l2

NEDD4 binding protein 2-like 2

(MGI:3797340|PMID:18360097)

PMID:18360097

MGI:3797340

NCBI chr12:627,128...650,604
Ensembl chr12:628,488...650,376

Nbn

nibrin

GO_REF:0000024
(MGI:2680772|PMID:14612522)

PMID:14612522

GO_REF:0000024 MGI:2680772

NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864

Nckap1

NCK-associated protein 1

MGI:3578145 (MGI:3701029|PMID:16831833)

PMID:16831833

MGI:3701029

NCBI chr 3:67,725,180...67,804,680
Ensembl chr 3:67,725,947...67,787,990

Ncor2

nuclear receptor co-repressor 2

MGI:3765904 (MGI:3764743|PMID:17928865)

PMID:17928865

MGI:3764743

NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701

Nlrp5

NLR family, pyrin domain containing 5

MGI:2178449 (MGI:1926689|PMID:11062459), (MGI:3811945|PMID:18804437)

PMID:11062459 PMID:18804437

MGI:1926689 MGI:3811945

NCBI chr 1:71,452,184...71,490,915
Ensembl chr 1:71,453,798...71,486,790

Nmt1

N-myristoyltransferase 1

MGI:3586313 (MGI:3584234|PMID:15753093)

PMID:15753093

MGI:3584234

NCBI chr10:91,126,689...91,160,721
Ensembl chr10:91,126,689...91,160,720

Nodal

nodal growth differentiation factor

MGI:2158732|MGI:2180793 (MGI:2155575|PMID:11311163), (MGI:3511374|PMID:15485907)

PMID:11311163 PMID:15485907

MGI:2155575 MGI:3511374

NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096

Nog

noggin

GO_REF:0000107
MGI:1862000 (MGI:3709795|PMID:17359964)

PMID:17359964

GO_REF:0000107 MGI:3709795

NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386

Nos3

nitric oxide synthase 3

GO_REF:0000107
(MGI:2157736|PMID:11732991)

PMID:11732991

GO_REF:0000107 MGI:2157736

NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410

Notch1

notch receptor 1

MGI:1857230 (MGI:72973|PMID:7789282)

PMID:7789282

MGI:72973

NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025

Notch2

notch receptor 2

GO_REF:0000107
MGI:1857783 (MGI:3703838|PMID:17359302)

PMID:17359302

GO_REF:0000107 MGI:3703838

NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215

Npat

nuclear protein, co-activator of histone transcription

MGI:5636907 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 8:58,120,179...58,158,052
Ensembl chr 8:58,120,179...58,158,052

Nr2f2

nuclear receptor subfamily 2, group F, member 2

MGI:2385933|MGI:3579117 (MGI:3708079|PMID:17404209)

PMID:17404209

MGI:3708079

NCBI chr 1:131,447,671...131,465,749
Ensembl chr 1:131,448,447...131,460,473

Nradd

neurotrophin receptor associated death domain

RGD

PMID:12095158

RGD:1299507

NCBI chr 8:118,890,402...118,893,712
Ensembl chr 8:118,890,399...118,893,702

Nsrp1

nuclear speckle splicing regulatory protein 1

MGI:3923407 (MGI:5050029|PMID:21296756)

PMID:21296756

MGI:5050029

NCBI chr10:63,098,115...63,131,779
Ensembl chr10:63,098,116...63,133,185

Nsun2

NOP2/Sun RNA methyltransferase 2

MGI:4432654 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 1:36,295,650...36,319,906
Ensembl chr 1:36,295,650...36,319,966

Nxn

nucleoredoxin

MGI:5548389 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr10:64,411,710...64,550,147
Ensembl chr10:64,412,833...64,550,145

Ocrl

OCRL, inositol polyphosphate-5-phosphatase

MGI:103257 (MGI:4440378|PMID:20195868)

PMID:20195868

MGI:4440378

NCBI chr X:134,742,226...134,793,411
Ensembl chr X:134,742,356...134,792,618

Ooep

oocyte expressed protein

MGI:3812181 (MGI:3811945|PMID:18804437)

PMID:18804437

MGI:3811945

NCBI chr 8:85,719,447...85,720,806
Ensembl chr 8:85,719,496...85,720,790

Otud7b

OTU deubiquitinase 7B

MGI:5637162 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 2:198,231,353...198,302,220
Ensembl chr 2:198,231,291...198,300,201

P2ry2

purinergic receptor P2Y2

RGD

PMID:14517997

RGD:2316694

NCBI chr 1:166,031,228...166,045,423
Ensembl chr 1:166,031,272...166,037,424

Palb2

partner and localizer of BRCA2

MGI:5495930 (MGI:5492311|PMID:23657012)

PMID:23657012

MGI:5492311

NCBI chr 1:192,064,586...192,088,547
Ensembl chr 1:192,064,589...192,088,520

Pcgf2

polycomb group ring finger 2

MGI:88174 (MGI:1932296|PMID:11290297)

PMID:11290297

MGI:1932296

NCBI chr10:85,631,829...85,642,591
Ensembl chr10:85,632,819...85,636,902

Pcnt

pericentrin

MGI:3799303 (MGI:4438783|PMID:20096683)

PMID:20096683

MGI:4438783

NCBI chr20:12,943,523...13,038,615
Ensembl chr20:12,944,786...13,038,431

Pdgfra

platelet derived growth factor receptor alpha

GO_REF:0000107
MGI:1926728 (MGI:1336614|PMID:10331973), (MGI:3696608|PMID:17143286)

PMID:10331973 PMID:17143286

GO_REF:0000107 MGI:1336614 MGI:3696608

NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031

Pdgfrb

platelet derived growth factor receptor beta

MGI:2135508 (MGI:3696608|PMID:17143286)

PMID:17143286

MGI:3696608

NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381

Pdzk1

PDZ domain containing 1

MGI:5692756 (MGI:5888818|PMID:27996060)

NCBI chr 2:198,965,685...198,999,323
Ensembl chr 2:198,965,685...198,999,323

Pitpnb

phosphatidylinositol transfer protein, beta

MGI:3582490 (MGI:2676294|PMID:11907258)

PMID:11907258

MGI:2676294

NCBI chr12:51,279,194...51,341,752
Ensembl chr12:51,280,150...51,341,716

Pitx2

paired-like homeodomain 2

MGI:2136268 (MGI:2135655|PMID:11493526)

PMID:11493526

MGI:2135655

NCBI chr 2:233,602,732...233,621,059
Ensembl chr 2:233,602,732...233,621,129

Pkd1

polycystin 1, transient receptor potential channel interacting

MGI:1197519|MGI:1857562 (MGI:3760608|PMID:16282979)

PMID:16282979

MGI:3760608

NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008

Plcg1

phospholipase C, gamma 1

GO_REF:0000107
MGI:2388142 (MGI:2176315|PMID:11744703)

PMID:11744703

GO_REF:0000107 MGI:2176315

NCBI chr 3:156,727,642...156,758,307
Ensembl chr 3:156,727,642...156,758,307

Plod3

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3

MGI:3620600|MGI:3620601 (MGI:3618677|PMID:16467571)

PMID:16467571

MGI:3618677

NCBI chr12:22,716,421...22,726,982
Ensembl chr12:22,716,423...22,726,982

Polb

DNA polymerase beta

MGI:4950969 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr16:74,237,001...74,260,272
Ensembl chr16:74,237,001...74,260,271

Polg2

DNA polymerase gamma 2, accessory subunit

MGI:5470227 (MGI:5465384|PMID:23197651)

PMID:23197651

MGI:5465384

NCBI chr10:94,968,836...94,979,259
Ensembl chr10:94,968,836...94,979,259

Prdm1

PR/SET domain 1

MGI:3605483 (MGI:3604853|PMID:15750184)

PMID:15750184

MGI:3604853

NCBI chr20:49,464,921...49,556,623
Ensembl chr20:49,464,919...49,556,518

Prkcsh

protein kinase C substrate 80K-H

MGI:5442302 (MGI:5441703|PMID:21685914)

PMID:21685914

MGI:5441703

NCBI chr 8:23,014,802...23,026,507
Ensembl chr 8:23,014,956...23,026,503

Prmt1

protein arginine methyltransferase 1

MGI:2448365 (MGI:1354943|PMID:10848611)

PMID:10848611

MGI:1354943

NCBI chr 1:100,971,132...100,980,411
Ensembl chr 1:100,971,273...100,980,340

Prrc2b

proline-rich coiled-coil 2B

MGI:4461729 (MGI:5888818|PMID:27996060)

NCBI chr 3:11,165,687...11,252,401
Ensembl chr 3:11,198,401...11,248,558

Psph

phosphoserine phosphatase

MGI:4950198 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr12:30,514,128...30,526,551
Ensembl chr12:30,514,112...30,526,557

Ptch1

patched 1

MGI:2384818 (MGI:5317250|PMID:21406566)

PMID:21406566

MGI:5317250

NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873

Pth1r

parathyroid hormone 1 receptor

MGI:5014612 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 8:118,984,531...119,012,803
Ensembl chr 8:118,988,053...119,012,671

Ptprr

protein tyrosine phosphatase, receptor type, R

IEA
ISS
ISO

GO_REF:0000107
GO_REF:0000024
(PMID:10601328)

Ensembl
UniProt
RGD

PMID:10601328

GO_REF:0000024 GO_REF:0000107

NCBI chr 7:59,039,717...59,325,925
Ensembl chr 7:59,039,720...59,325,947

Rad51b

RAD51 paralog B

MGI:3621480|MGI:98834 (MGI:1349263|PMID:10567591)

PMID:10567591

MGI:1349263

NCBI chr 6:102,473,978...103,018,185
Ensembl chr 6:102,477,036...102,512,505

Rbbp6

RB binding protein 6, ubiquitin ligase

MGI:3711066 (MGI:3710702|PMID:17470788)

PMID:17470788

MGI:3710702

NCBI chr 1:192,933,264...192,965,160
Ensembl chr 1:192,933,540...192,965,158

Rcn1

reticulocalbin 1

(MGI:4355498|PMID:19474196)

PMID:19474196

MGI:4355498

NCBI chr 3:95,404,863...95,419,110
Ensembl chr 3:95,406,284...95,418,679

Rdh10

retinol dehydrogenase 10

(MGI:3709664|PMID:17473173)

PMID:17473173

MGI:3709664

NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030

Resp18

regulated endocrine-specific protein 18

MGI:4949626 (MGI:4948828|PMID:21104147)

PMID:21104147

MGI:4948828

NCBI chr 9:82,470,794...82,477,136
Ensembl chr 9:82,470,759...82,477,181

Ric8a

RIC8 guanine nucleotide exchange factor A

GO_REF:0000107
MGI:3608888 (MGI:3692154|PMID:16221497)

PMID:16221497

GO_REF:0000107 MGI:3692154

NCBI chr 1:213,606,599...213,612,905
Ensembl chr 1:213,606,599...213,612,904

Rnaseh2b

ribonuclease H2, subunit B

MGI:4432164 (MGI:5435090|PMID:22802351)

PMID:22802351

MGI:5435090

NCBI chr15:45,422,010...45,472,792
Ensembl chr15:45,422,010...45,464,892

Rpa1

replication protein A1

MGI:3582609 (MGI:3056835|PMID:15470499)

PMID:15470499

MGI:3056835

NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512

Rpgrip1l

Rpgrip1-like

MGI:3716208 (MGI:3715393|PMID:17553904)

PMID:17553904

MGI:3715393

NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055

Rrn3

RRN3 homolog, RNA polymerase I transcription factor

MGI:3584037 (MGI:3583493|PMID:15989966)

PMID:15989966

MGI:3583493

NCBI chr10:3,170,387...3,214,648
Ensembl chr10:3,170,742...3,214,655

Rtcb

RNA 2',3'-cyclic phosphate and 5'-OH ligase

(MGI:4818852|PMID:20510672)

PMID:20510672

MGI:4818852

NCBI chr 7:23,913,830...23,933,191
Ensembl chr 7:23,913,830...23,933,191

Rundc1

RUN domain containing 1

MGI:5548750 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr10:89,339,003...89,349,230
Ensembl chr10:89,339,029...89,347,835

Runx1

RUNX family transcription factor 1

MGI:3043614 (MGI:3759935|PMID:16174759)

PMID:16174759

MGI:3759935

NCBI chr11:32,765,147...33,003,061
Ensembl chr11:32,769,165...33,003,021

Rxra

retinoid X receptor alpha

MGI:98215 (MGI:1328715|PMID:9892670)

PMID:9892670

MGI:1328715

NCBI chr 3:6,272,560...6,295,354
Ensembl chr 3:6,211,789...6,295,908

Rxrb

retinoid X receptor beta

MGI:98214 (MGI:1328715|PMID:9892670)

PMID:9892670

MGI:1328715

NCBI chr20:3,822,673...3,829,138
Ensembl chr20:3,823,042...3,829,140

Sall4

spalt-like transcription factor 4

MGI:3692447 (MGI:3692015|PMID:17060609)

PMID:17060609

MGI:3692015

NCBI chr 3:165,520,155...165,538,176
Ensembl chr 3:165,520,392...165,537,940

Sec24c

SEC24 homolog C, COPII coat complex component

MGI:4431706 (MGI:5775865|PMID:24876386)

PMID:24876386

MGI:5775865

NCBI chr15:4,035,196...4,057,209
Ensembl chr15:4,035,196...4,057,157

Sec24d

SEC24 homolog D, COPII coat complex component

MGI:4330860|MGI:4340594 (MGI:5508866|PMID:23596517), (MGI:5775865|PMID:24876386)

PMID:23596517 PMID:24876386

MGI:5508866 MGI:5775865

NCBI chr 2:227,455,704...227,562,801
Ensembl chr 2:227,455,722...227,562,319

Sh3pxd2a

SH3 and PX domains 2A

MGI:5636944 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 1:267,039,654...267,245,868
Ensembl chr 1:267,046,361...267,245,636

Sin3a

SIN3 transcription regulator family member A

MGI:3583656 (MGI:3582110|PMID:15998811)

PMID:15998811

MGI:3582110

NCBI chr 8:61,748,590...61,803,314
Ensembl chr 8:61,762,768...61,803,099

Slc25a20

solute carrier family 25 member 20

MGI:4431570 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 8:117,455,308...117,476,762
Ensembl chr 8:117,455,262...117,476,734

Slc30a1

solute carrier family 30 member 1

MGI:3056498 (MGI:3056220|PMID:15452870)

PMID:15452870

MGI:3056220

NCBI chr13:110,677,810...110,681,683
Ensembl chr13:110,677,810...110,681,683

Slc34a2

solute carrier family 34 member 2

GO_REF:0000107
MGI:3841013 (MGI:3840413|PMID:19233126)

PMID:19233126

GO_REF:0000107 MGI:3840413

NCBI chr14:60,257,211...60,276,516
Ensembl chr14:60,256,712...60,276,794

Slc39a1

solute carrier family 39 member 1

MGI:2147269|MGI:3625131 (MGI:3624433|PMID:16652366)

PMID:16652366

MGI:3624433

NCBI chr 2:189,609,766...189,615,367
Ensembl chr 2:189,609,800...189,615,366

Slc39a3

solute carrier family 39 member 3

MGI:1353474 (MGI:3624433|PMID:16652366)

PMID:16652366

MGI:3624433

NCBI chr 7:11,545,073...11,551,074
Ensembl chr 7:11,545,024...11,553,370

Slc5a7

solute carrier family 5 member 7

MGI:4942035 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 9:5,294,377...5,330,822
Ensembl chr 9:5,294,381...5,330,815

Slit2

slit guidance ligand 2

MGI:2179460 (MGI:3819920|PMID:18829537)

PMID:18829537

MGI:3819920

NCBI chr14:66,831,848...67,171,491
Ensembl chr14:66,831,848...67,170,361

Smad2

SMAD family member 2

MGI:1201674|MGI:1857692 (MGI:3618021|PMID:15183723), (MGI:3758991|PMID:17849440)

PMID:15183723 PMID:17849440

MGI:3618021 MGI:3758991

NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078

Smad3

SMAD family member 3

MGI:108051 (MGI:3618021|PMID:15183723)

PMID:15183723

MGI:3618021

NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349

Smad4

SMAD family member 4

GO_REF:0000107
MGI:1858049 (MGI:1195384|PMID:9420335)

PMID:9420335

GO_REF:0000107 MGI:1195384

NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199

Smarca4

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

MGI:2386105|MGI:3605892|MGI:3611933 (MGI:3610843|PMID:16287714), (MGI:5469230|PMID:23319608)

PMID:16287714 PMID:23319608

MGI:3610843 MGI:5469230

NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468

Smg9

SMG9 nonsense mediated mRNA decay factor

MGI:5692712 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 1:81,259,450...81,282,893
Ensembl chr 1:81,260,548...81,282,887

Smo

smoothened, frizzled class receptor

GO_REF:0000107
MGI:2176255 (MGI:3766861|PMID:17881493)

PMID:17881493

GO_REF:0000107 MGI:3766861

NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770

Smpd4

sphingomyelin phosphodiesterase 4

MGI:5548688 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr11:87,522,971...87,546,687
Ensembl chr11:87,522,971...87,546,687

Sox10

SRY-box transcription factor 10

MGI:98370 (MGI:3701016|PMID:16790476)

PMID:16790476

MGI:3701016

NCBI chr 7:120,393,238...120,403,523
Ensembl chr 7:120,393,254...120,403,523

Sox18

SRY-box transcription factor 18

NOT

PMID:10742113 PMID:11094083 PMID:18931657 PMID:19429912

MGI:1355042 MGI:1927721 MGI:3828192 MGI:3849921

NCBI chr 3:177,177,237...177,179,039
Ensembl chr 3:177,177,310...177,179,127

Sox5

SRY-box transcription factor 5

MGI:2447147 (MGI:3693054|PMID:17084361)

PMID:17084361

MGI:3693054

NCBI chr 4:178,062,267...179,031,991
Ensembl chr 4:178,066,165...178,441,547

Sox6

SRY-box transcription factor 6

MGI:2447148 (MGI:3693054|PMID:17084361)

PMID:17084361

MGI:3693054

NCBI chr 1:185,631,702...186,186,192
Ensembl chr 1:185,673,177...186,182,829

Sox8

SRY-box transcription factor 8

GO_REF:0000024
MGI:98358 (MGI:3701016|PMID:16790476)

PMID:16790476

GO_REF:0000024 MGI:3701016

NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336

Sp1

Sp1 transcription factor

MGI:1277166 (MGI:3717030|PMID:17584888)

NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629

Sp2

Sp2 transcription factor

MGI:4441277 (MGI:4439418|PMID:20221402)

PMID:20221402

MGI:4439418

NCBI chr10:84,890,930...84,920,886
Ensembl chr10:84,890,932...84,920,886

Sp3

Sp3 transcription factor

MGI:98372 (MGI:3717030|PMID:17584888)

NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692

Speg

striated muscle enriched protein kinase

MGI:4830540 (MGI:4830240|PMID:19118250)

PMID:19118250

MGI:4830240

NCBI chr 9:82,571,333...82,628,684
Ensembl chr 9:82,571,269...82,628,709

Srf

serum response factor

MGI:2158696 (MGI:1312998|PMID:9799237)

PMID:9799237

MGI:1312998

NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225

Srsf1

serine and arginine rich splicing factor 1

MGI:3530159 (MGI:3528790|PMID:15652482)

PMID:15652482

MGI:3528790

NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197

Ssr2

signal sequence receptor subunit 2

MGI:5637009 (MGI:5888818|PMID:27996060)

NCBI chr 2:187,951,316...187,960,067
Ensembl chr 2:187,951,344...187,960,063

Stil

STIL, centriolar assembly protein

MGI:2152962 (MGI:1339521|PMID:10385121)

PMID:10385121

MGI:1339521

NCBI chr 5:133,819,302...133,851,362
Ensembl chr 5:133,819,726...133,851,416

Syf2

SYF2 pre-mRNA-splicing factor

MGI:3904866 (MGI:5435138|PMID:22448250)

PMID:22448250

MGI:5435138

NCBI chr 5:153,269,638...153,277,562
Ensembl chr 5:153,269,526...153,277,563

Syvn1

synoviolin 1

MGI:2679656 (MGI:3575050|PMID:15611074)

PMID:15611074

MGI:3575050

NCBI chr 1:221,409,281...221,416,229
Ensembl chr 1:221,409,271...221,417,886

Tab1

TGF-beta activated kinase 1/MAP3K7 binding protein 1

MGI:2667182 (MGI:2447107|PMID:12464436)

PMID:12464436

MGI:2447107

NCBI chr 7:121,350,953...121,382,100
Ensembl chr 7:121,350,965...121,382,088

Tanc2

tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2

GO_REF:0000107
MGI:4346764 (MGI:4845797|PMID:21068316)

PMID:21068316

GO_REF:0000107 MGI:4845797

NCBI chr10:93,811,350...94,132,418
Ensembl chr10:93,811,350...94,127,697

Tasor

transcription activation suppressor

MGI:6341945 (MGI:6380343|PMID:31112734)

PMID:31112734

MGI:6380343

NCBI chr16:3,050,506...3,108,168
Ensembl chr16:3,051,449...3,105,531

Tbx3

T-box transcription factor 3

MGI:3710254 (MGI:3709665|PMID:17473172)

PMID:17473172

MGI:3709665

NCBI chr12:42,479,518...42,494,588
Ensembl chr12:42,480,560...42,492,526

Tcf7l2

transcription factor 7 like 2

MGI:4431951 (MGI:5888818|PMID:27996060)

NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514

Tctn1

tectonic family member 1

MGI:3716885 (MGI:3610767|PMID:16357211)

PMID:16357211

MGI:3610767

NCBI chr12:39,790,948...39,828,215
Ensembl chr12:39,790,965...39,824,064

Tdgf1

teratocarcinoma-derived growth factor 1

MGI:1857518 (MGI:1321047|PMID:9876177)

PMID:9876177

MGI:1321047

NCBI chr 8:119,215,266...119,220,909
Ensembl chr 8:119,215,495...119,219,232

Tead4

TEA domain transcription factor 4

MGI:106907 (MGI:3770613|PMID:18083014)

PMID:18083014

MGI:3770613

NCBI chr 4:161,542,566...161,619,848
Ensembl chr 4:161,540,130...161,587,222

Tent5c

terminal nucleotidyltransferase 5C

MGI:5637082 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 2:202,797,766...202,816,562
Ensembl chr 2:202,798,198...202,816,562

Terf2

telomeric repeat binding factor 2

MGI:3619525 (MGI:3615734|PMID:15968270)

PMID:15968270

MGI:3615734

NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893

Tgfb3

transforming growth factor, beta 3

MGI:2158731 (MGI:2686855|PMID:14729481)

PMID:14729481

MGI:2686855

NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533

Tgfbr1

transforming growth factor, beta receptor 1

MGI:2386570|MGI:2388050 (MGI:1933434|PMID:11285230), (MGI:2686855|PMID:14729481), (MGI:3703113|PMID:17078885)

PMID:11285230 PMID:14729481 PMID:17078885

MGI:1933434 MGI:2686855 MGI:3703113

NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635

Tgfbr2

transforming growth factor, beta receptor 2

MGI:2384513 (MGI:1329756|PMID:10030593), (MGI:3829327|PMID:18990706)

PMID:10030593 PMID:18990706

MGI:1329756 MGI:3829327

NCBI chr 8:124,310,288...124,399,345
Ensembl chr 8:124,312,754...124,399,494

Tgfbr3

transforming growth factor beta receptor 3

MGI:3818438 (MGI:3818140|PMID:17704211)

PMID:17704211

MGI:3818140

NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545

Tie1

tyrosine kinase with immunoglobulin-like and EGF-like domains 1

MGI:108448 (MGI:1930385|PMID:11172728)

PMID:11172728

MGI:1930385

NCBI chr 5:137,294,544...137,321,116
Ensembl chr 5:137,294,544...137,321,121

Tmed2

transmembrane p24 trafficking protein 2

MGI:4343479|MGI:4456438 (MGI:4453264|PMID:20178780)

PMID:20178780

MGI:4453264

NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297

Tmem100

transmembrane protein 100

MGI:4881485|MGI:5432904|MGI:5432905 (MGI:4850237|PMID:20848592), (MGI:5432418|PMID:22783020)

PMID:20848592 PMID:22783020

MGI:4850237 MGI:5432418

NCBI chr10:77,537,340...77,543,710
Ensembl chr10:77,537,340...77,543,192

Tmem231

transmembrane protein 231

MGI:4284576 (MGI:5300833|PMID:22179047)

PMID:22179047

MGI:5300833

NCBI chr19:44,137,444...44,158,624
Ensembl chr19:44,137,423...44,158,624

Tp53

tumor protein p53

NOT

PMID:9288110 PMID:9425892 PMID:10567591 PMID:17325035

MGI:1096207 MGI:1101752 MGI:1349263 MGI:3709911

NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449

Tpm1

tropomyosin 1

MGI:2387893 (MGI:1196172|PMID:9440710)

PMID:9440710

MGI:1196172

NCBI chr 8:72,814,737...72,841,496
Ensembl chr 8:72,814,740...72,842,228

Traf6

TNF receptor associated factor 6

MGI:4840586 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607

Trim28

tripartite motif-containing 28

MGI:1928907 (MGI:5319411|PMID:22495301)

PMID:22495301

MGI:5319411

NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043

Tshz3

teashirt zinc finger homeobox 3

MGI:3810527 (MGI:3806378|PMID:18776146)

PMID:18776146

MGI:3806378

NCBI chr 1:92,703,180...92,775,020
Ensembl chr 1:92,703,080...92,774,975

Ttn

titin

MGI:3654306 (MGI:3653555|PMID:16702235)

PMID:16702235

MGI:3653555

NCBI chr 3:63,565,160...63,837,815

Twist1

twist family bHLH transcription factor 1

MGI:3038818 (MGI:3042355|PMID:15030764)

PMID:15030764

MGI:3042355

NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214

Ube2a

ubiquitin-conjugating enzyme E2A

NOT

MGI:102944 (MGI:3050931|PMID:15169909)
MGI:2450874 (MGI:3050931|PMID:15169909)

PMID:15169909

MGI:3050931

NCBI chr X:123,486,988...123,497,726
Ensembl chr X:123,486,989...123,497,726

Ube2b

ubiquitin-conjugating enzyme E2B

MGI:102959 (MGI:3050931|PMID:15169909)

PMID:15169909

MGI:3050931

NCBI chr10:37,439,947...37,454,867
Ensembl chr10:37,441,284...37,455,022

Ubr3

ubiquitin protein ligase E3 component n-recognin 3

MGI:3718505 (MGI:3718176|PMID:17462990)

PMID:17462990

MGI:3718176

NCBI chr 3:56,125,927...56,283,908
Ensembl chr 3:56,125,924...56,281,055

Unk

unk zinc finger

MGI:4880910 (MGI:5888818|PMID:27996060)
GO_REF:0000107

GO_REF:0000107 MGI:5888818

NCBI chr10:104,582,531...104,613,102
Ensembl chr10:104,582,955...104,612,033

Upb1

beta-ureidopropionase 1

RGD

PMID:6870258

RGD:2317093

NCBI chr20:14,167,383...14,193,724
Ensembl chr20:14,167,586...14,193,690

Usp9x

ubiquitin specific peptidase 9, X-linked

MGI:95387 (MGI:5532214|PMID:23861879)

PMID:23861879

MGI:5532214

NCBI chr X:10,510,033...10,660,555
Ensembl chr X:10,510,033...10,630,297

Uty

ubiquitously transcribed tetratricopeptide repeat containing, Y-linked

MGI:3877328 (MGI:5305502|PMID:22192413), (MGI:5515940|PMID:23028370)

PMID:22192413 PMID:23028370

MGI:5305502 MGI:5515940

NCBI chr Y:1,065,274...1,206,127
Ensembl chr Y:989,240...1,206,096

Vegfa

vascular endothelial growth factor A

MGI:1931047 (MGI:1339868|PMID:10229225)

PMID:10229225

MGI:1339868

NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681

Wdr19

WD repeat domain 19

MGI:5315747|MGI:5315748 (MGI:5314316|PMID:22228095)

PMID:22228095

MGI:5314316

NCBI chr14:44,705,012...44,767,120
Ensembl chr14:44,705,012...44,767,120

Wdtc1

WD and tetratricopeptide repeats 1

MGI:3774270 (MGI:3770497|PMID:17767906)

PMID:17767906

MGI:3770497

NCBI chr 5:151,487,572...151,536,829
Ensembl chr 5:151,487,577...151,536,518

Wnt3a

Wnt family member 3A

MGI:1857088 (MGI:53909|PMID:4819561)

PMID:4819561

MGI:53909

NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035

Wnt7b

Wnt family member 7B

MGI:3793280 (MGI:3788965|PMID:18367557)

PMID:18367557

MGI:3788965

NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723

Wnt9b

Wnt family member 9B

MGI:3526437 (MGI:3588895|PMID:16054034)

PMID:16054034

MGI:3588895

NCBI chr10:91,785,892...91,808,061
Ensembl chr10:91,785,893...91,807,937

Xrcc2

X-ray repair cross complementing 2

MGI:3654106 (MGI:3652689|PMID:16777961)

PMID:16777961

MGI:3652689

NCBI chr 4:5,842,013...5,860,516
Ensembl chr 4:5,841,998...5,860,527

Xrcc4

X-ray repair cross complementing 4

MGI:1926771 (MGI:1913213|PMID:9875844)

PMID:9875844

MGI:1913213

NCBI chr 2:18,674,496...18,927,463
Ensembl chr 2:18,677,220...18,927,365

Ybx1

Y box binding protein 1

IEA

GO_REF:0000107

Ensembl

GO_REF:0000107

NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475

Ybx3

Y box binding protein 3

GO_REF:0000107
MGI:99146 (MGI:3692516|PMID:16954378)

PMID:16954378

GO_REF:0000107 MGI:3692516

NCBI chr 4:165,606,819...165,630,041
Ensembl chr 4:165,606,819...165,630,118

Ythdc1

YTH domain containing 1

MGI:6194737 (MGI:6161521|PMID:29799838)
GO_REF:0000107

PMID:29799838

GO_REF:0000107 MGI:6161521

NCBI chr14:22,971,834...23,002,326
Ensembl chr14:22,971,836...23,002,011

Zbtb18

zinc finger and BTB domain containing 18

MGI:3851929 (MGI:3851676|PMID:19409883)

PMID:19409883

MGI:3851676

NCBI chr13:95,582,234...95,593,316
Ensembl chr13:95,589,668...95,591,236

Zfand5

zinc finger AN1-type containing 5

MGI:3526860 (MGI:3696608|PMID:17143286)

PMID:17143286

MGI:3696608

NCBI chr 1:238,842,506...238,854,030
Ensembl chr 1:238,843,338...238,852,566

Zfp335

zinc finger protein 335

GO_REF:0000107
MGI:3857418|MGI:4125700 (MGI:5468205|PMID:23178126)

PMID:23178126

GO_REF:0000107 MGI:5468205

NCBI chr 3:161,357,201...161,378,073
Ensembl chr 3:161,357,278...161,376,119

Zfp42

zinc finger protein 42

MGI:99187 (MGI:4940138|PMID:21233130)

PMID:21233130

MGI:4940138

NCBI chr16:52,016,590...52,026,346

Zfpm2

zinc finger protein, multitype 2

MGI:3587413 (MGI:3586963|PMID:16103912)

PMID:16103912

MGI:3586963

NCBI chr 7:79,471,277...79,964,405
Ensembl chr 7:79,638,046...79,964,405

Zmiz1

zinc finger, MIZ-type containing 1

MGI:3769389 (MGI:3768282|PMID:17967885)

PMID:17967885

MGI:3768282

NCBI chr16:1,749,191...1,954,633
Ensembl chr16:1,749,191...1,954,614

blastocyst development

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Atp1b1

ATPase Na+/K+ transporting subunit beta 1

MGI:1888635

NCBI chr13:82,737,161...82,757,681
Ensembl chr13:82,737,159...82,758,004

Bnip2

BCL2 interacting protein 2

(MGI:3848119|PMID:19117032)

PMID:19117032

MGI:3848119

NCBI chr 8:76,400,333...76,426,307
Ensembl chr 8:76,400,341...76,426,503

Capn2

calpain 2

MGI:3628453 (MGI:3620446|PMID:16433929)

PMID:16433929

MGI:3620446

NCBI chr13:100,878,649...100,928,811
Ensembl chr13:100,878,650...100,928,811

Cdk11b

cyclin-dependent kinase 11B

GO_REF:0000107
MGI:3043373 (MGI:3041915|PMID:15060143)

PMID:15060143

GO_REF:0000107 MGI:3041915

NCBI chr 5:173,051,900...173,078,049
Ensembl chr 5:173,052,063...173,078,046

Cdx2

caudal type homeo box 2

MGI:1857928 (MGI:3578587|PMID:15788452)

PMID:15788452

MGI:3578587

NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565

Dad1

defender against cell death 1

MGI:2445490 (MGI:1858316|PMID:10748466)

PMID:10748466

MGI:1858316

NCBI chr15:32,868,136...32,887,933
Ensembl chr15:32,868,087...32,888,095

Dmbt1

deleted in malignant brain tumors 1

MGI:3497714 (MGI:3057099|PMID:15452149)

PMID:15452149

MGI:3057099

NCBI chr 1:201,620,642...201,689,905
NCBI chr 1:203,149,414...203,228,705

Elf3

E74 like ETS transcription factor 3

(MGI:3624255|PMID:16630543)

PMID:16630543

MGI:3624255

NCBI chr13:52,083,873...52,088,798
Ensembl chr13:52,083,859...52,088,780

Emg1

EMG1 N1-specific pseudouridine methyltransferase

MGI:4839753 (MGI:4839400|PMID:20858271)

PMID:20858271

MGI:4839400

NCBI chr 4:157,222,366...157,230,647
Ensembl chr 4:157,222,385...157,230,647

Eomes

eomesodermin

MGI:3579497 (MGI:3578587|PMID:15788452)

PMID:15788452

MGI:3578587

NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493

Etv2

ETS variant transcription factor 2

(MGI:3624255|PMID:16630543)

PMID:16630543

MGI:3624255

NCBI chr 1:89,091,239...89,094,570
Ensembl chr 1:89,091,239...89,094,530

G2e3

G2/M-phase specific E3 ubiquitin protein ligase

MGI:3808723 (MGI:3807157|PMID:18511420)

PMID:18511420

MGI:3807157

NCBI chr 6:72,092,148...72,123,878
Ensembl chr 6:72,092,194...72,122,497

Gdf9

growth differentiation factor 9

(PMID:24313324)

PMID:24313324

NCBI chr10:38,782,519...38,793,238
Ensembl chr10:38,788,992...38,792,940

Hand1

heart and neural crest derivatives expressed 1

(PMID:11802795)

PMID:11802795

NCBI chr10:43,250,729...43,253,296
Ensembl chr10:43,250,745...43,253,296

Hnf1a

HNF1 homeobox A

(MGI:3653309|PMID:16880268)

PMID:16880268

MGI:3653309

NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342

Hormad1

HORMA domain containing 1

GO_REF:0000024
(MGI:4868505|PMID:21079677)

PMID:21079677

GO_REF:0000024 MGI:4868505

NCBI chr 2:197,681,820...197,720,197
Ensembl chr 2:197,682,000...197,719,254

Kpna7

karyopherin subunit alpha 7

MGI:6108355 (MGI:5913752|PMID:20699224)

PMID:20699224

MGI:5913752

NCBI chr12:11,347,631...11,378,810
Ensembl chr12:11,347,643...11,384,349

Med21

mediator complex subunit 21

MGI:2445456 (MGI:1345774|PMID:10500093)

PMID:10500093

MGI:1345774

NCBI chr 4:180,961,194...180,968,155
Ensembl chr 4:180,961,142...180,968,123

N4bp2l2

NEDD4 binding protein 2-like 2

(MGI:3797340|PMID:18360097)

PMID:18360097

MGI:3797340

NCBI chr12:627,128...650,604
Ensembl chr12:628,488...650,376

Nasp

nuclear autoantigenic sperm protein

GO_REF:0000024
(MGI:3694318|PMID:16728391)

PMID:16728391

GO_REF:0000024 MGI:3694318

NCBI chr 5:135,446,485...135,472,113
Ensembl chr 5:135,446,962...135,472,116

Nek2

NIMA-related kinase 2

(MGI:3848119|PMID:19117032)

PMID:19117032

MGI:3848119

NCBI chr13:110,511,546...110,524,750
Ensembl chr13:110,511,668...110,522,769

Npm2

nucleophosmin/nucleoplasmin 2

(PMID:12714744)

PMID:12714744

NCBI chr15:52,337,457...52,345,849
Ensembl chr15:52,337,528...52,344,629

Pou5f1

POU class 5 homeobox 1

(PMID:21258368)

PMID:21258368

NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994

Psmc3

proteasome 26S subunit, ATPase 3

MGI:2180548 (MGI:1860964|PMID:10945464)

PMID:10945464

MGI:1860964

NCBI chr 3:79,876,938...79,882,319
Ensembl chr 3:79,876,938...79,882,319

Psmc4

proteasome 26S subunit, ATPase 4

MGI:2180553 (MGI:1860964|PMID:10945464)

PMID:10945464

MGI:1860964

NCBI chr 1:84,978,220...84,986,536
Ensembl chr 1:84,978,206...84,986,581

Rpl13

ribosomal protein L13

(MGI:6116315|PMID:26902285)

MGI:6116315

NCBI chr19:55,917,489...55,920,040
Ensembl chr19:55,917,736...55,919,996

Rrm2

ribonucleotide reductase regulatory subunit M2

(MGI:6116315|PMID:26902285)

MGI:6116315

NCBI chr 6:43,884,627...43,890,818
Ensembl chr 6:43,884,678...43,889,515

Smarcb1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1

MGI:2387974|MGI:2388033 (MGI:1932782|PMID:11263494), (MGI:1933896|PMID:11313485)

PMID:11263494 PMID:11313485

MGI:1932782 MGI:1933896

NCBI chr20:13,679,955...13,702,821
Ensembl chr20:13,680,716...13,704,931

Spic

Spi-C transcription factor

(MGI:3624255|PMID:16630543)

PMID:16630543

MGI:3624255

NCBI chr 7:29,225,721...29,233,452
Ensembl chr 7:29,225,727...29,233,392

Tgfbr1

transforming growth factor, beta receptor 1

(MGI:1326851|PMID:9921650)

PMID:9921650

MGI:1326851

NCBI chr 5:63,056,071...63,119,635
Ensembl chr 5:63,050,758...63,119,635

Tgfbr3

transforming growth factor beta receptor 3

(MGI:1326851|PMID:9921650)

PMID:9921650

MGI:1326851

NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545

Thoc2

THO complex 2

(MGI:5529717|PMID:24315442)

PMID:24315442

MGI:5529717

NCBI chr X:128,153,824...128,268,327
Ensembl chr X:128,161,895...128,268,322

Thoc5

THO complex 5

(MGI:5529717|PMID:24315442)

PMID:24315442

MGI:5529717

NCBI chr14:85,138,219...85,171,729
Ensembl chr14:85,142,279...85,171,726

Xab2

XPA binding protein 2

MGI:3574459 (MGI:3574001|PMID:15725628)

PMID:15725628

MGI:3574001

NCBI chr12:2,158,391...2,170,397
Ensembl chr12:2,158,389...2,170,504

Yap1

Yes1 associated transcriptional regulator

MGI:3056522|MGI:3757577|MGI:4819826 (MGI:6116315|PMID:26902285)

MGI:6116315

NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579

blastocyst formation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Actl6a

actin-like 6A

(MGI:5913376|PMID:27869233)

NCBI chr 2:119,112,776...119,128,870
Ensembl chr 2:119,112,513...119,129,751

Bysl

bystin-like

(MGI:3700849|PMID:17242206)

PMID:17242206

MGI:3700849

NCBI chr 9:15,393,461...15,403,212
Ensembl chr 9:15,393,330...15,403,117

Ccnb1ip1

cyclin B1 interacting protein 1

MGI:3050548 (MGI:3757893|PMID:17784788)

PMID:17784788

MGI:3757893

NCBI chr15:27,720,220...27,736,528
Ensembl chr15:27,720,223...27,733,785

Furin

furin (paired basic amino acid cleaving enzyme)

GO_REF:0000107
UniProtKB:Q61139 (MGI:5702364|PMID:26416966)

PMID:26416966

GO_REF:0000107 MGI:5702364

NCBI chr 1:142,185,092...142,198,167
Ensembl chr 1:142,185,094...142,197,182

Gabpa

GA binding protein transcription factor subunit alpha

(MGI:5913376|PMID:27869233)

NCBI chr11:24,293,845...24,322,822
Ensembl chr11:24,263,281...24,322,815

Kdm4c

lysine demethylase 4C

(MGI:4421125|PMID:19696013)

PMID:19696013

MGI:4421125

NCBI chr 5:90,800,139...91,012,662
Ensembl chr 5:90,800,082...91,012,659

Matr3

matrin 3

GO_REF:0000107
(MGI:5913376|PMID:27869233)

GO_REF:0000107 MGI:5913376

NCBI chr18:28,351,691...28,390,764
Ensembl chr18:28,361,283...28,390,717

Mfn2

mitofusin 2

(MGI:3587532|PMID:16083859)

PMID:16083859

MGI:3587532

NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145

Mfng

MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

(MGI:5913376|PMID:27869233)

NCBI chr 7:119,978,981...119,996,824
Ensembl chr 7:119,978,983...119,996,824

Mxi1

MAX interactor 1, dimerization protein

(MGI:5913376|PMID:27869233)

NCBI chr 1:274,030,748...274,090,071
Ensembl chr 1:274,030,978...274,090,071

Nop2

NOP2 nucleolar protein

(MGI:5913376|PMID:27869233)

NCBI chr 4:157,646,759...157,658,502
Ensembl chr 4:157,647,082...157,658,390

Pbrm1

polybromo 1

(MGI:5913376|PMID:27869233)

NCBI chr16:7,103,714...7,202,899
Ensembl chr16:7,103,998...7,200,362

Pnldc1

PARN like, ribonuclease domain containing 1

(MGI:5913376|PMID:27869233)

NCBI chr 1:48,038,830...48,058,400
Ensembl chr 1:48,039,909...48,058,400

Prickle2

prickle planar cell polarity protein 2

MGI:4941925 (MGI:5319591|PMID:22333836)

PMID:22333836

MGI:5319591

NCBI chr 4:124,238,167...124,584,176
Ensembl chr 4:124,238,167...124,338,176

Ptpn18

protein tyrosine phosphatase, non-receptor type 18

(MGI:5913376|PMID:27869233)

NCBI chr 9:40,972,089...40,988,790
Ensembl chr 9:40,972,089...40,988,790

Rpl7l1

ribosomal protein L7-like 1

(MGI:5605165|PMID:23211737), (MGI:5913376|PMID:27869233)

NCBI chr 9:16,508,477...16,516,502
Ensembl chr 9:16,508,799...16,513,120

Rrp7a

ribosomal RNA processing 7 homolog A

(MGI:5605165|PMID:23211737), (MGI:5913376|PMID:27869233)

NCBI chr 7:123,980,251...123,990,139
Ensembl chr 7:123,980,251...123,990,139

Rtn4

reticulon 4

GO_REF:0000107
(MGI:5913376|PMID:27869233)

GO_REF:0000107 MGI:5913376

NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458

Sf3b1

splicing factor 3b, subunit 1

(MGI:5605165|PMID:23211737), (MGI:5913376|PMID:27869233)

NCBI chr 9:61,594,620...61,634,510
Ensembl chr 9:61,594,620...61,634,510

Sf3b6

splicing factor 3B, subunit 6

(MGI:5605165|PMID:23211737), (MGI:5913376|PMID:27869233)

NCBI chr 6:29,991,232...29,999,668
Ensembl chr 6:29,991,307...29,999,410

Skil

SKI-like proto-oncogene

MGI:2387096 (MGI:1858539|PMID:10811619)

PMID:10811619

MGI:1858539

NCBI chr 2:115,862,932...115,891,304
Ensembl chr 2:115,866,701...115,891,097

Supt6h

SPT6 homolog, histone chaperone and transcription elongation factor

(MGI:5913376|PMID:27869233)

NCBI chr10:65,470,470...65,507,581
Ensembl chr10:65,470,471...65,507,581

Tead4

TEA domain transcription factor 4

MGI:3763362 (MGI:3811945|PMID:18804437)

PMID:18804437

MGI:3811945

NCBI chr 4:161,542,566...161,619,848
Ensembl chr 4:161,540,130...161,587,222

Tjp1

tight junction protein 1

(MGI:3797149|PMID:18423437)

PMID:18423437

MGI:3797149

NCBI chr 1:126,146,489...126,515,359
Ensembl chr 1:126,146,489...126,227,469

Tm4sf1

transmembrane 4 L six family member 1

(MGI:5913376|PMID:27869233)

NCBI chr 2:147,382,866...147,392,062
Ensembl chr 2:147,382,866...147,392,062

Txnrd3

thioredoxin reductase 3

(MGI:5913376|PMID:27869233)

NCBI chr 4:121,612,332...121,650,543
Ensembl chr 4:121,612,332...121,650,571

Uspl1

ubiquitin specific peptidase like 1

(MGI:5913376|PMID:27869233)

NCBI chr12:6,930,018...6,957,027
Ensembl chr12:6,929,978...6,956,984

Wdr74

WD repeat domain 74

(MGI:5287298|PMID:21799883), (MGI:5913376|PMID:27869233)

PMID:21799883 PMID:27869233

MGI:5287298 MGI:5913376

NCBI chr 1:224,933,906...224,938,659
Ensembl chr 1:224,933,529...224,938,662

Zp3

zona pellucida glycoprotein 3

IEA
ISO
ISS

GO_REF:0000107
(MGI:4943828|PMID:20382503)
GO_REF:0000024

Ensembl
RGD
UniProt

PMID:20382503

GO_REF:0000024 GO_REF:0000107 MGI:4943828

NCBI chr12:23,735,225...23,752,734
Ensembl chr12:23,735,223...23,742,190

blastocyst growth

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CTR9 homolog, Paf1/RNA polymerase II complex component

MGI:101893 (MGI:5528755|PMID:24036311)

NCBI chr 1:175,839,140...175,869,167
Ensembl chr 1:175,839,108...175,869,165

Ints1

integrator complex subunit 1

MGI:3663683 (MGI:3722560|PMID:17544522)

PMID:17544522

MGI:3722560

NCBI chr12:16,950,704...16,974,896

Nbn

nibrin

IEA
ISO
ISS

GO_REF:0000107
(MGI:2680772|PMID:14612522)
GO_REF:0000024

Ensembl
RGD
UniProt

PMID:14612522

GO_REF:0000024 GO_REF:0000107 MGI:2680772

NCBI chr 5:29,622,347...29,656,877
Ensembl chr 5:29,622,281...29,656,864

Pou5f1

POU class 5 homeobox 1

MGI:109345 (MGI:5528755|PMID:24036311)

NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994

Rad51b

RAD51 paralog B

MGI:3621480 (MGI:1349263|PMID:10567591)

PMID:10567591

MGI:1349263

NCBI chr 6:102,473,978...103,018,185
Ensembl chr 6:102,477,036...102,512,505

Rtf1

Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)

(MGI:5528755|PMID:24036311)

NCBI chr 3:111,478,350...111,537,941
Ensembl chr 3:111,478,382...111,537,941

Smarca4

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

MGI:2386105 (MGI:1929360|PMID:11163203)

PMID:11163203

MGI:1929360

NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468

Ubtfl1

upstream binding transcription factor like 1

(MGI:4414743|PMID:19915186)

UBTF like 6, pseudogene1

(MGI:4414743|PMID:19915186)

PMID:19915186

MGI:4414743

NCBI chr 8:17,525,070...17,530,404

Zfp830

zinc finger protein 830

MGI:3583779 (MGI:3582017|PMID:15988037)

PMID:15988037

MGI:3582017

NCBI chr10:70,118,250...70,119,714
Ensembl chr10:70,118,250...70,119,716

blastocyst hatching

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Akap3

A-kinase anchoring protein 3

(MGI:5913376|PMID:27869233)

NCBI chr 4:159,399,686...159,425,512
Ensembl chr 4:159,403,501...159,425,629

Ankrd7

ankyrin repeat domain 7

(MGI:5913376|PMID:27869233)

NCBI chr 4:45,564,542...45,618,932
Ensembl chr 4:45,567,573...45,586,228

Arhgdig

Rho GDP dissociation inhibitor gamma

(MGI:5913376|PMID:27869233)

anti-silencing function 1B histone chaperone

(MGI:5913376|PMID:27869233)

NCBI chr19:25,077,918...25,092,491
Ensembl chr19:25,077,918...25,092,491

Bcor

BCL6 co-repressor

(MGI:5913376|PMID:27869233)

NCBI chr X:11,570,155...11,692,022
Ensembl chr X:11,648,989...11,691,099

Ccdc24

coiled-coil domain containing 24

(MGI:5913376|PMID:27869233)

NCBI chr 5:136,691,655...136,707,197
Ensembl chr 5:136,703,674...136,706,998

Ccdc62

coiled-coil domain containing 62

(MGI:5913376|PMID:27869233)

NCBI chr12:38,057,532...38,093,916
Ensembl chr12:38,057,556...38,093,050

Cmtm3

CKLF-like MARVEL transmembrane domain containing 3

(MGI:5913376|PMID:27869233)

NCBI chr19:830,874...838,528
Ensembl chr19:830,877...838,099

Coprs

coordinator of PRMT5 and differentiation stimulator

(MGI:5913376|PMID:27869233)

NCBI chr16:80,826,681...80,831,791
Ensembl chr16:80,826,681...80,831,791

CTR9 homolog, Paf1/RNA polymerase II complex component

(MGI:5913376|PMID:27869233)

NCBI chr 1:175,839,140...175,869,167
Ensembl chr 1:175,839,108...175,869,165

Fbll1

fibrillarin-like 1

(MGI:5913376|PMID:27869233)

NCBI chr10:20,620,957...20,622,600
Ensembl chr10:20,620,957...20,622,600

Grn

granulin precursor

(MGI:3589098|PMID:15901638)

PMID:15901638

MGI:3589098

NCBI chr10:90,377,103...90,383,207
Ensembl chr10:90,376,933...90,383,205

Hcfc1

host cell factor C1

(MGI:5913376|PMID:27869233)

NCBI chr X:156,812,012...156,837,227
Ensembl chr X:156,812,064...156,837,227

Hs3st6

heparan sulfate-glucosamine 3-sulfotransferase 6

(MGI:5913376|PMID:27869233)

NCBI chr10:14,122,856...14,128,984
Ensembl chr10:14,122,878...14,128,983

LOC688459

hypothetical protein LOC688459

ISO
IBA

(MGI:5913376|PMID:27869233)
PMID:21873635

PMID:27869233, PMID:21873635

MGI:5913376, RGD:13792537

NCBI chr 9:23,420,654...23,424,832
Ensembl chr 9:23,420,654...23,424,832

Lpar6

lysophosphatidic acid receptor 6

(MGI:5913376|PMID:27869233)

NCBI chr15:55,126,953...55,128,762
Ensembl chr15:55,126,953...55,128,761

Ndufa2

NADH:ubiquinone oxidoreductase subunit A2

(MGI:5913376|PMID:27869233)

NCBI chr18:29,585,671...29,587,760
Ensembl chr18:29,585,671...29,587,760

Necab1

N-terminal EF-hand calcium binding protein 1

(MGI:5913376|PMID:27869233)

NCBI chr 5:28,507,596...28,737,556
Ensembl chr 5:28,504,558...28,737,719

Pemt

phosphatidylethanolamine N-methyltransferase

(MGI:5913376|PMID:27869233)

NCBI chr10:46,339,821...46,404,640
Ensembl chr10:46,339,821...46,404,642

Phf6

PHD finger protein 6

(MGI:5913376|PMID:27869233)

NCBI chr  X:158,698,353...158,739,855
Ensembl chr  X:158,698,356...158,739,838
Ensembl chr  X:158,698,356...158,739,838

Plpp4

phospholipid phosphatase 4

(MGI:5913376|PMID:27869233)

NCBI chr 1:202,432,366...202,560,628
Ensembl chr 1:202,432,366...202,560,628

Ppp4r4

protein phosphatase 4, regulatory subunit 4

(MGI:5913376|PMID:27869233)

NCBI chr 6:127,400,585...127,497,280
Ensembl chr 6:127,400,585...127,497,280

Prss29

serine protease 29

MGI:2149951 (MGI:3703092|PMID:17156484)

PMID:17156484

MGI:3703092

NCBI chr10:14,678,286...14,681,877
Ensembl chr10:14,678,278...14,681,888

Rbbp8

RB binding protein 8, endonuclease

MGI:3577029 (MGI:3575978|PMID:15831459)

PMID:15831459

MGI:3575978

NCBI chr18:3,134,630...3,227,702
Ensembl chr18:3,162,543...3,227,688

Slc25a34

solute carrier family 25, member 34

GO_REF:0000107
(MGI:5913376|PMID:27869233)

GO_REF:0000107 MGI:5913376

NCBI chr 5:160,175,206...160,179,978
Ensembl chr 5:160,176,124...160,179,978

Slc35e2b

solute carrier family 35, member E2B

(MGI:5913376|PMID:27869233)

NCBI chr 5:173,024,335...173,050,228
Ensembl chr 5:173,024,335...173,046,194

Smarca4

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4

MGI:2386105 (MGI:1929360|PMID:11163203)

PMID:11163203

MGI:1929360

NCBI chr 8:22,648,323...22,739,468
Ensembl chr 8:22,648,323...22,739,468

Smarcb1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1

MGI:2387974|MGI:2388033 (MGI:1932782|PMID:11263494), (MGI:1933896|PMID:11313485)

PMID:11263494 PMID:11313485

MGI:1932782 MGI:1933896

NCBI chr20:13,679,955...13,702,821
Ensembl chr20:13,680,716...13,704,931

Smim14

small integral membrane protein 14

(MGI:5913376|PMID:27869233)

NCBI chr14:44,413,636...44,460,044
Ensembl chr14:44,413,636...44,457,239

St8sia6

ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6

(MGI:5913376|PMID:27869233)

NCBI chr17:80,960,785...81,002,830
Ensembl chr17:80,960,785...81,002,838

Stmn3

stathmin 3

GO_REF:0000107
(MGI:5913376|PMID:27869233)

GO_REF:0000107 MGI:5913376

NCBI chr 3:176,808,016...176,816,108
Ensembl chr 3:176,808,017...176,816,162

Suds3

SDS3 homolog, SIN3A corepressor complex component

(MGI:5913376|PMID:27869233)

NCBI chr12:45,199,012...45,221,507
Ensembl chr12:45,199,577...45,221,512

Suv39h1

suppressor of variegation 3-9 homolog 1

(MGI:5913376|PMID:27869233)

NCBI chr X:146,532,002...146,533,538

Tbl1xr1

TBL1X receptor 1

(MGI:5913376|PMID:27869233)

NCBI chr 2:107,221,913...107,359,229
Ensembl chr 2:107,233,054...107,359,229

Ube2a

ubiquitin-conjugating enzyme E2A

(MGI:5913376|PMID:27869233)

NCBI chr X:123,486,988...123,497,726
Ensembl chr X:123,486,989...123,497,726

Zbed6

zinc finger, BED-type containing 6

(MGI:5913376|PMID:27869233)

NCBI chr13:50,196,143...50,211,670

Zfp14

ZFP14 zinc finger protein

(MGI:5913376|PMID:27869233)

NCBI chr 1:88,350,361...88,367,370
Ensembl chr 1:88,350,361...88,361,851

Zfp420

zinc finger protein 420

(MGI:5913376|PMID:27869233)

NCBI chr 1:88,531,975...88,564,480
Ensembl chr 1:88,542,035...88,544,156

branching involved in labyrinthine layer morphogenesis

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adm

adrenomedullin

MGI:2176598 (MGI:3689296|PMID:16981008)

PMID:16981008

MGI:3689296

NCBI chr 1:175,443,189...175,447,260
Ensembl chr 1:175,445,088...175,447,259

Fgfr2

fibroblast growth factor receptor 2

MGI:2153790 (MGI:1197797|PMID:9435295)

PMID:9435295

MGI:1197797

NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928

Fzd5

frizzled class receptor 5

GO_REF:0000107
MGI:3583769 (MGI:5494335|PMID:23610556)

PMID:23610556

GO_REF:0000107 MGI:5494335

NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739

Gcm1

glial cells missing transcription factor 1

MGI:2183479 (MGI:1860502|PMID:10888880)

PMID:10888880

MGI:1860502

NCBI chr 8:85,355,766...85,369,002
Ensembl chr 8:85,355,766...85,369,002

Grb2

growth factor receptor bound protein 2

MGI:2677457 (MGI:1934095|PMID:11369229)

PMID:11369229

MGI:1934095

NCBI chr10:104,193,953...104,263,071
Ensembl chr10:104,193,955...104,263,071

Il10

interleukin 10

MGI:1857199 (MGI:3664708|PMID:12842419)

PMID:12842419

MGI:3664708

NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392

Llgl2

LLGL scribble cell polarity complex component 2

MGI:4331862 (MGI:5052233|PMID:21606200)

PMID:21606200

MGI:5052233

NCBI chr10:104,367,826...104,403,726
Ensembl chr10:104,368,247...104,403,724

Rspo3

R-spondin 3

MGI:3695687 (MGI:3695333|PMID:16963017)

PMID:16963017

MGI:3695333

NCBI chr 1:30,681,648...30,768,038
Ensembl chr 1:30,681,681...30,766,860

Socs3

suppressor of cytokine signaling 3

GO_REF:0000107
MGI:2180861 (MGI:2137984|PMID:11481489)

PMID:11481489

GO_REF:0000107 MGI:2137984

NCBI chr10:106,973,863...106,976,969
Ensembl chr10:106,975,178...106,976,040

Spint1

serine peptidase inhibitor, Kunitz type 1

MGI:3709554 (MGI:3700412|PMID:17174946)

PMID:17174946

MGI:3700412

NCBI chr 3:111,049,132...111,061,991
Ensembl chr 3:111,049,118...111,062,011

cell differentiation involved in embryonic placenta development

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Eomes

eomesodermin

(MGI:1354065|PMID:10716450)

PMID:10716450

MGI:1354065

NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493

Gcm1

glial cells missing transcription factor 1

ISO
IBA

MGI:2183479 (MGI:1860502|PMID:10888880)
PMID:21873635

PMID:10888880, PMID:21873635

MGI:1860502, RGD:13792537

NCBI chr 8:85,355,766...85,369,002
Ensembl chr 8:85,355,766...85,369,002

Krt19

keratin 19

MGI:96705 (MGI:1926669|PMID:11062258)

PMID:11062258

MGI:1926669

NCBI chr10:88,055,843...88,060,560
Ensembl chr10:88,055,841...88,060,561

Krt8

keratin 8

MGI:96693 (MGI:1926669|PMID:11062258)

PMID:11062258

MGI:1926669

NCBI chr 7:143,596,511...143,603,745
Ensembl chr 7:143,596,511...143,603,803

Stk3

serine/threonine kinase 3

GO_REF:0000107
MGI:1929004 (MGI:4412133|PMID:19786569)

PMID:19786569

GO_REF:0000107 MGI:4412133

NCBI chr 7:73,617,926...73,883,896
Ensembl chr 7:73,618,644...73,883,812

Stk4

serine/threonine kinase 4

MGI:1928487 (MGI:4412133|PMID:19786569)

PMID:19786569

MGI:4412133

NCBI chr 3:160,467,552...160,546,540
Ensembl chr 3:160,467,552...160,546,540

chorio-allantoic fusion

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Bmp5

bone morphogenetic protein 5

UniProtKB:P23359 (MGI:1332253|PMID:10079236)

PMID:10079236

MGI:1332253

NCBI chr 8:82,669,466...82,950,273
Ensembl chr 8:82,878,941...82,950,273

Bmp7

bone morphogenetic protein 7

UniProtKB:P49003 (MGI:1332253|PMID:10079236)

PMID:10079236

MGI:1332253

NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399

Ccn1

cellular communication network factor 1

GO_REF:0000107
MGI:2446577 (MGI:2446415|PMID:12446788)

PMID:12446788

GO_REF:0000107 MGI:2446415

NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312

Dnajb6

DnaJ heat shock protein family (Hsp40) member B6

MGI:2151092 (MGI:1329806|PMID:10021343)

PMID:10021343

MGI:1329806

NCBI chr 4:2,711,329...2,774,969
Ensembl chr 4:2,711,385...2,774,890

Erf

Ets2 repressor factor

MGI:3719472 (MGI:3718929|PMID:17502352)

PMID:17502352

MGI:3718929

NCBI chr 1:82,112,449...82,120,902
Ensembl chr 1:82,112,449...82,120,902

Itga4

integrin subunit alpha 4

MGI:1857206 (MGI:70927|PMID:7539359)

PMID:7539359

MGI:70927

NCBI chr 3:66,178,745...66,265,547
Ensembl chr 3:66,193,059...66,263,960

Lef1

lymphoid enhancer binding factor 1

GO_REF:0000107
MGI:98504 (MGI:1334099|PMID:10090727)

PMID:10090727

GO_REF:0000107 MGI:1334099

NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056

Vcam1

vascular cell adhesion molecule 1

MGI:1857452|MGI:2153830 (MGI:70297|PMID:7530222), (MGI:70924|PMID:7539357)

PMID:7530222 PMID:7539357

MGI:70297 MGI:70924

NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619

Wnt7b

Wnt family member 7B

MGI:2387443 (MGI:2150456|PMID:11543617)

PMID:11543617

MGI:2150456

NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723

Zfp36l1

zinc finger protein 36, C3H type-like 1

MGI:3050540 (MGI:3047495|PMID:15226444)

PMID:15226444

MGI:3047495

NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074

embryonic placenta development

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Arnt

aryl hydrocarbon receptor nuclear translocator

GO_REF:0000107
MGI:1857680 (MGI:3703383|PMID:16287860)

PMID:16287860

GO_REF:0000107 MGI:3703383

NCBI chr 2:196,594,178...196,651,486
Ensembl chr 2:196,594,303...196,651,179

Bptf

bromodomain PHD finger transcription factor

MGI:3823037 (MGI:3821803|PMID:18794365)

PMID:18794365

MGI:3821803

NCBI chr10:95,248,573...95,350,162
Ensembl chr10:95,250,294...95,349,789

Cebpa

CCAAT/enhancer binding protein alpha

GO_REF:0000107
MGI:88373 (MGI:3511604|PMID:15509779)

PMID:15509779

GO_REF:0000107 MGI:3511604

NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164

Cebpb

CCAAT/enhancer binding protein beta

MGI:99480 (MGI:3511604|PMID:15509779)

PMID:15509779

MGI:3511604

NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910

Cited2

Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2

MGI:2176158 (MGI:3628724|PMID:16579983)

PMID:16579983

MGI:3628724

NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786

Csf2

colony stimulating factor 2

MGI:1930997 (MGI:4360451|PMID:19228596)

PMID:19228596

MGI:4360451

NCBI chr10:39,602,089...39,604,070
Ensembl chr10:39,602,089...39,604,070

Egfr

epidermal growth factor receptor

MGI:1856402 (MGI:74263|PMID:7618084)

PMID:7618084

MGI:74263

NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796

Epas1

endothelial PAS domain protein 1

GO_REF:0000107
MGI:106918 (MGI:3703383|PMID:16287860)

PMID:16287860

GO_REF:0000107 MGI:3703383

NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265

Esrrb

estrogen-related receptor beta

MGI:1857422 (MGI:1095811|PMID:9285590)

PMID:9285590

MGI:1095811

NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906

Foxd3

forkhead box D3

MGI:2388719 (MGI:3604420|PMID:16039639)

PMID:16039639

MGI:3604420

NCBI chr 5:118,346,283...118,349,120

Gata2

GATA binding protein 2

MGI:1857743 (MGI:86206|PMID:9043071)

PMID:9043071

MGI:86206

NCBI chr 4:120,129,028...120,142,490
Ensembl chr 4:120,133,713...120,142,488

Hectd1

HECT domain E3 ubiquitin protein ligase 1

MGI:2137552|MGI:3706565 (MGI:5604339|PMID:24855001)

PMID:24855001

MGI:5604339

NCBI chr 6:72,509,658...72,596,285
Ensembl chr 6:72,510,255...72,596,446

Hif1a

hypoxia inducible factor 1 subunit alpha

GO_REF:0000107
MGI:109169|MGI:2179429 (MGI:3703383|PMID:16287860)

PMID:16287860

GO_REF:0000107 MGI:3703383

NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052

Hsf1

heat shock transcription factor 1

MGI:2155444 (MGI:1347429|PMID:10545106)

PMID:10545106

MGI:1347429

NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478

insulin-like growth factor 2

GO_REF:0000024
(MGI:2181513|PMID:12087403)

PMID:12087403

GO_REF:0000024 MGI:2181513

NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911

Med1

mediator complex subunit 1

MGI:2684189 (MGI:2682174|PMID:14500757)

PMID:14500757

MGI:2682174

NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880

Nodal

nodal growth differentiation factor

MGI:1856970|MGI:2158730 (MGI:2138058|PMID:11456449)

PMID:11456449

MGI:2138058

NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096

Pdgfb

platelet derived growth factor subunit B

GO_REF:0000024
(MGI:3039044|PMID:15084468)

PMID:15084468

GO_REF:0000024 MGI:3039044

NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741

Pkd1

polycystin 1, transient receptor potential channel interacting

(MGI:4836293|PMID:20862291)

PMID:20862291

MGI:4836293

NCBI chr10:13,914,057...13,962,008
Ensembl chr10:13,915,214...13,962,008

Pkd2

polycystin 2, transient receptor potential cation channel

MGI:1860840 (MGI:3612025|PMID:16301212), (MGI:4836293|PMID:20862291)

PMID:16301212 PMID:20862291

MGI:3612025 MGI:4836293

NCBI chr14:6,602,004...6,645,257
Ensembl chr14:6,602,004...6,645,257

Prdm1

PR/SET domain 1

MGI:3605483 (MGI:3604853|PMID:15750184)

PMID:15750184

MGI:3604853

NCBI chr20:49,464,921...49,556,623
Ensembl chr20:49,464,919...49,556,518

Slc8a1

solute carrier family 8 member A1

MGI:4849923 (MGI:4867054|PMID:21302256)

PMID:21302256

MGI:4867054

NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604

Sp1

Sp1 transcription factor

MGI:1277166 (MGI:3717030|PMID:17584888)

NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629

Sp3

Sp3 transcription factor

MGI:98372 (MGI:3717030|PMID:17584888)

NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692

Spint1

serine peptidase inhibitor, Kunitz type 1

MGI:3581891 (MGI:3581379|PMID:15964823)

PMID:15964823

MGI:3581379

NCBI chr 3:111,049,132...111,061,991
Ensembl chr 3:111,049,118...111,062,011

Tfeb

transcription factor EB

(MGI:1306865|PMID:9806910)

PMID:9806910

MGI:1306865

NCBI chr 9:15,208,141...15,264,101
Ensembl chr 9:15,207,822...15,214,596

Tmed2

transmembrane p24 trafficking protein 2

MGI:4456438 (MGI:4453264|PMID:20178780)

PMID:20178780

MGI:4453264

NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297

Ttpa

alpha tocopherol transfer protein

MGI:2386172 (MGI:3691723|PMID:16014812)

PMID:16014812

MGI:3691723

NCBI chr 5:34,007,926...34,029,315
Ensembl chr 5:34,007,920...34,028,452

embryonic placenta morphogenesis

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cdkn1c

cyclin-dependent kinase inhibitor 1C

MGI:1933758|MGI:3840687 (MGI:3839493|PMID:19276117)

PMID:19276117

MGI:3839493

NCBI chr 1:216,661,067...216,663,791
Ensembl chr 1:216,661,080...216,663,721

insulin-like growth factor 2

GO_REF:0000107
(MGI:5908476|PMID:28522536)

PMID:28522536

GO_REF:0000107 MGI:5908476

NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911

Setd2

SET domain containing 2, histone lysine methyltransferase

MGI:4437211 (MGI:4431136|PMID:20133625)

PMID:20133625

MGI:4431136

NCBI chr 8:118,802,478...118,888,224
Ensembl chr 8:118,803,075...118,888,224

Trim28

tripartite motif-containing 28

MGI:1928907 (MGI:5300649|PMID:22110054)

PMID:22110054

MGI:5300649

NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043

Vcam1

vascular cell adhesion molecule 1

MGI:2153830 (MGI:70297|PMID:7530222)

PMID:7530222

MGI:70297

NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619

Wnt7b

Wnt family member 7B

MGI:2387443 (MGI:2150456|PMID:11543617)

PMID:11543617

MGI:2150456

NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723

epithelial cell morphogenesis involved in placental branching

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Grhl2

grainyhead-like transcription factor 2

MGI:4340678 (MGI:5634845|PMID:25758223)

PMID:25758223

MGI:5634845

NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856

Spint2

serine peptidase inhibitor, Kunitz type, 2

MGI:1338881|MGI:2156187 (MGI:4360135|PMID:19592578)

PMID:19592578

MGI:4360135

NCBI chr 1:87,199,373...87,221,826
Ensembl chr 1:87,199,313...87,221,892

St14

ST14 transmembrane serine protease matriptase

MGI:1338031 (MGI:4360135|PMID:19592578)

PMID:19592578

MGI:4360135

NCBI chr 8:32,240,113...32,280,813
Ensembl chr 8:32,240,133...32,280,869

glycogen cell differentiation involved in embryonic placenta development

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Akt1

AKT serine/threonine kinase 1

MGI:2675202 (MGI:2673047|PMID:12783884)

PMID:12783884

MGI:2673047

NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258

inner cell mass cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

CTR9 homolog, Paf1/RNA polymerase II complex component

(MGI:5528755|PMID:24036311)

NCBI chr 1:175,839,140...175,869,167
Ensembl chr 1:175,839,108...175,869,165

Hnf1b

HNF1 homeobox B

MGI:1857856 (MGI:1346632|PMID:10518496)

PMID:10518496

MGI:1346632

NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902

Nle1

notchless homolog 1

MGI:3624778 (MGI:3623851|PMID:16611995)

PMID:16611995

MGI:3623851

NCBI chr10:70,250,959...70,261,880
Ensembl chr10:70,250,959...70,259,553

Tet1

tet methylcytosine dioxygenase 1

(MGI:3844762|PMID:19372391), (MGI:4822076|PMID:20639862), (MGI:4939073|PMID:21295276)

PMID:19372391 PMID:20639862 PMID:21295276

MGI:3844762 MGI:4822076 MGI:4939073

NCBI chr20:27,359,122...27,438,039
Ensembl chr20:27,366,213...27,437,427

inner cell mass cell fate commitment

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Lats1

large tumor suppressor kinase 1

MGI:1354386 (MGI:5502808|PMID:23824537)

NCBI chr 1:1,784,078...1,817,310
Ensembl chr 1:1,784,078...1,817,310

Lats2

large tumor suppressor kinase 2

MGI:1333883 (MGI:5502808|PMID:23824537)

NCBI chr15:37,943,609...37,995,175
Ensembl chr15:37,943,609...37,983,882

Prdm14

PR/SET domain 14

(MGI:5528721|PMID:24183668)

PMID:24183668

MGI:5528721

NCBI chr 5:5,710,076...5,730,560
Ensembl chr 5:5,710,392...5,730,560

inner cell mass cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Brca2

BRCA2, DNA repair associated

GO_REF:0000107
MGI:1930617 (MGI:707943|PMID:9171369)

PMID:9171369

GO_REF:0000107 MGI:707943

NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748

Brd4

bromodomain containing 4

MGI:2674141 (MGI:2179909|PMID:11997514)

PMID:11997514

MGI:2179909

NCBI chr 7:14,222,101...14,303,055
Ensembl chr 7:14,222,101...14,303,055

Chek1

checkpoint kinase 1

MGI:1928818 (MGI:1860048|PMID:10859163)

PMID:10859163

MGI:1860048

NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882

Cops2

COP9 signalosome subunit 2

MGI:2678281 (MGI:2676528|PMID:12972599)

PMID:12972599

MGI:2676528

NCBI chr 3:118,109,394...118,137,125
Ensembl chr 3:118,109,406...118,137,191

Dmbt1

deleted in malignant brain tumors 1

(MGI:3057099|PMID:15452149)

PMID:15452149

MGI:3057099

NCBI chr 1:201,620,642...201,689,905
NCBI chr 1:203,149,414...203,228,705

Gins1

GINS complex subunit 1

MGI:3706309 (MGI:3703396|PMID:16287864)

PMID:16287864

MGI:3703396

NCBI chr 3:146,695,366...146,716,787
Ensembl chr 3:146,695,344...146,716,816

Gins4

GINS complex subunit 4

GO_REF:0000107
MGI:5575557 (MGI:5568335|PMID:24244394)

PMID:24244394

GO_REF:0000107 MGI:5568335

NCBI chr16:73,584,412...73,596,808
Ensembl chr16:73,584,521...73,596,793

Ints1

integrator complex subunit 1

MGI:3663683 (MGI:3722560|PMID:17544522)

PMID:17544522

MGI:3722560

NCBI chr12:16,950,704...16,974,896

Ncapg2

non-SMC condensin II complex, subunit G2

MGI:3039486 (MGI:3027420|PMID:14729962)

PMID:14729962

MGI:3027420

NCBI chr 6:144,291,313...144,362,454
Ensembl chr 6:144,291,974...144,363,947

Ndel1

nudE neurodevelopment protein 1-like 1

MGI:3589467 (MGI:3588829|PMID:16107726)

PMID:16107726

MGI:3588829

NCBI chr10:55,398,919...55,456,654
Ensembl chr10:55,411,901...55,444,861

Palb2

partner and localizer of BRCA2

MGI:3801303 (MGI:4459579|PMID:20484223)

PMID:20484223

MGI:4459579

NCBI chr 1:192,064,586...192,088,547
Ensembl chr 1:192,064,589...192,088,520

Pelo

pelota mRNA surveillance and ribosome rescue factor

MGI:2450933 (MGI:2450001|PMID:12556505)

PMID:12556505

MGI:2450001

NCBI chr 2:47,266,758...47,268,526
Ensembl chr 2:47,266,738...47,268,625

Prpf19

pre-mRNA processing factor 19

MGI:3711357 (MGI:3709933|PMID:17283042)

PMID:17283042

MGI:3709933

NCBI chr 1:226,947,065...226,958,147
Ensembl chr 1:226,947,105...226,958,144

Sall4

spalt-like transcription factor 4

MGI:3699175 (MGI:3698636|PMID:16790473)

PMID:16790473

MGI:3698636

NCBI chr 3:165,520,155...165,538,176
Ensembl chr 3:165,520,392...165,537,940

Sbds

SBDS, ribosome maturation factor

MGI:3664792 (MGI:3655752|PMID:16914746)

PMID:16914746

MGI:3655752

NCBI chr12:29,921,443...29,930,602
Ensembl chr12:29,921,443...29,930,600

Setdb1

SET domain bifurcated histone lysine methyltransferase 1

MGI:3040431 (MGI:3038026|PMID:14993285)

PMID:14993285

MGI:3038026

NCBI chr 2:196,495,867...196,527,412
Ensembl chr 2:196,495,867...196,527,127

Taf8

TATA-box binding protein associated factor 8

MGI:3033758 (MGI:1926844|PMID:11076765)

PMID:11076765

MGI:1926844

NCBI chr 9:15,513,048...15,532,992
Ensembl chr 9:15,513,063...15,529,800

Zpr1

ZPR1 zinc finger

(MGI:3575865|PMID:15767679)

PMID:15767679

MGI:3575865

NCBI chr 8:50,563,047...50,572,621
Ensembl chr 8:50,563,047...50,572,621

inner cell mass cellular morphogenesis

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Lats1

large tumor suppressor kinase 1

MGI:1354386 (MGI:5502808|PMID:23824537)

NCBI chr 1:1,784,078...1,817,310
Ensembl chr 1:1,784,078...1,817,310

Lats2

large tumor suppressor kinase 2

MGI:1333883 (MGI:5502808|PMID:23824537)

NCBI chr15:37,943,609...37,995,175
Ensembl chr15:37,943,609...37,983,882

Sox17

SRY-box transcription factor 17

MGI:3717121 (MGI:4946462|PMID:21146513)

PMID:21146513

MGI:4946462

NCBI chr 5:14,890,318...14,895,907
Ensembl chr 5:14,890,408...14,895,907

labyrinthine layer blood vessel development

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Akt1

AKT serine/threonine kinase 1

MGI:2675202 (MGI:2673047|PMID:12783884)

PMID:12783884

MGI:2673047

NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258

Ccn1

cellular communication network factor 1

GO_REF:0000107
MGI:2446577 (MGI:2446415|PMID:12446788)

PMID:12446788

GO_REF:0000107 MGI:2446415

NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312

Esx1

ESX homeobox 1

MGI:2153820 (MGI:1306980|PMID:9806555)

PMID:9806555

MGI:1306980

NCBI chr X:107,753,614...107,763,561

Fbxw8

F-box and WD repeat domain containing 8

MGI:3665136 (MGI:3653956|PMID:16880526)

PMID:16880526

MGI:3653956

NCBI chr12:44,046,204...44,138,138
Ensembl chr12:44,046,217...44,138,138

Fzd5

frizzled class receptor 5

GO_REF:0000107
MGI:2177951 (MGI:1329850|PMID:11092808)

PMID:11092808

GO_REF:0000107 MGI:1329850

NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739

Ggnbp2

gametogenetin binding protein 2

MGI:4072637 (MGI:5779255|PMID:26764350)
GO_REF:0000107

PMID:26764350

GO_REF:0000107 MGI:5779255

NCBI chr10:72,156,729...72,188,834
Ensembl chr10:72,156,728...72,188,308

Hes1

hes family bHLH transcription factor 1

GO_REF:0000107
(MGI:4453944|PMID:20122914)

PMID:20122914

GO_REF:0000107 MGI:4453944

NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248

Hey1

hes-related family bHLH transcription factor with YRPW motif 1

UniProtKB:Q9QUS4 (MGI:3040159|PMID:15107403)

PMID:15107403

MGI:3040159

NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696

Hey2

hes-related family bHLH transcription factor with YRPW motif 2

UniProtKB:Q9WV93 (MGI:3040159|PMID:15107403)

PMID:15107403

MGI:3040159

NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531

Hs6st1

heparan sulfate 6-O-sulfotransferase 1

MGI:3715259 (MGI:3715036|PMID:17405882)

PMID:17405882

MGI:3715036

NCBI chr 9:42,620,006...42,659,184
Ensembl chr 9:42,620,006...42,659,184

Junb

JunB proto-oncogene, AP-1 transcription factor subunit

GO_REF:0000107
MGI:2153821 (MGI:1332277|PMID:10022836)

PMID:10022836

GO_REF:0000107 MGI:1332277

NCBI chr19:26,092,972...26,094,756
Ensembl chr19:26,092,974...26,094,756

Llgl2

LLGL scribble cell polarity complex component 2

MGI:4331862 (MGI:5052233|PMID:21606200)

PMID:21606200

MGI:5052233

NCBI chr10:104,367,826...104,403,726
Ensembl chr10:104,368,247...104,403,724

Mapk1

mitogen activated protein kinase 1

MGI:3055889 (MGI:3041910|PMID:14622137)

PMID:14622137

MGI:3041910

NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254

Ncoa6

nuclear receptor coactivator 6

MGI:2445463|MGI:2450859 (MGI:2445240|PMID:12368298), (MGI:2450041|PMID:12556486)

PMID:12368298 PMID:12556486

MGI:2445240 MGI:2450041

NCBI chr 3:150,919,317...150,990,391
Ensembl chr 3:150,919,317...150,960,030

Nfe2

nuclear factor, erythroid 2

MGI:1857224 (MGI:5049808|PMID:21558372)

PMID:21558372

MGI:5049808

NCBI chr 7:144,872,739...144,880,092
Ensembl chr 7:144,872,747...144,880,092

Nsdhl

NAD(P) dependent steroid dehydrogenase-like

MGI:1862021 (MGI:3690259|PMID:17028112)

PMID:17028112

MGI:3690259

NCBI chr X:152,933,118...152,964,399
Ensembl chr X:152,933,069...152,964,390

Ovol2

ovo-like zinc finger 2

MGI:3777011 (MGI:3776202|PMID:17573777)

PMID:17573777

MGI:3776202

NCBI chr 3:138,433,990...138,464,511
Ensembl chr 3:138,433,990...138,462,063

Plcd1

phospholipase C, delta 1

MGI:107451 (MGI:3610693|PMID:16314520)

PMID:16314520

MGI:3610693

NCBI chr 8:127,753,514...127,782,070
Ensembl chr 8:127,753,539...127,782,070

Plcd3

phospholipase C, delta 3

MGI:97614 (MGI:3610693|PMID:16314520)

PMID:16314520

MGI:3610693

NCBI chr10:91,164,778...91,186,067
Ensembl chr10:91,164,812...91,186,054

Plg

plasminogen

MGI:1857291 (MGI:2668370|PMID:12900459)

PMID:12900459

MGI:2668370

NCBI chr 1:48,521,828...48,563,895
Ensembl chr 1:48,521,772...48,563,776

Rbpj

recombination signal binding protein for immunoglobulin kappa J region

(MGI:3056004|PMID:15466160)

PMID:15466160

MGI:3056004

NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450

Syde1

synapse defective Rho GTPase homolog 1

MGI:5905625 (MGI:5903668|PMID:27917469)

PMID:27917469

MGI:5903668

NCBI chr 7:14,037,646...14,043,632
Ensembl chr 7:14,037,620...14,043,779

Tmed2

transmembrane p24 trafficking protein 2

(MGI:4453264|PMID:20178780)

PMID:20178780

MGI:4453264

NCBI chr12:37,471,259...37,480,344
Ensembl chr12:37,471,260...37,480,297

Vash1

vasohibin 1

MGI:3846783 (MGI:5648606|PMID:25184477)

PMID:25184477

MGI:5648606

NCBI chr 6:110,624,377...110,640,942
Ensembl chr 6:110,624,856...110,637,382

Vash2

vasohibin 2

MGI:3846784 (MGI:5648606|PMID:25184477)

PMID:25184477

MGI:5648606

NCBI chr13:109,521,190...109,552,607
Ensembl chr13:109,521,190...109,552,589

Wnt2

Wnt family member 2

MGI:2177935 (MGI:84248|PMID:8951051)

PMID:8951051

MGI:84248

NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420

labyrinthine layer development

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Birc6

baculoviral IAP repeat-containing 6

MGI:3512417 (MGI:3511408|PMID:15485903)

PMID:15485903

MGI:3511408

NCBI chr 6:21,900,763...22,092,484
Ensembl chr 6:21,950,100...22,092,346

Cdx2

caudal type homeo box 2

MGI:88362 (MGI:4398801|PMID:19853565)

PMID:19853565

MGI:4398801

NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565

Cdx4

caudal type homeo box 4

MGI:88361 (MGI:4398801|PMID:19853565)

PMID:19853565

MGI:4398801

NCBI chr X:74,165,172...74,173,758
Ensembl chr X:74,165,187...74,173,347

Cited1

Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1

MGI:3028946 (MGI:3027297|PMID:14673158)

PMID:14673158

MGI:3027297

NCBI chr X:72,128,996...72,133,692
Ensembl chr X:72,128,994...72,133,692

Egln1

egl-9 family hypoxia-inducible factor 1

MGI:3690045 (MGI:3689683|PMID:16966370)

PMID:16966370

MGI:3689683

NCBI chr19:57,660,194...57,701,158
Ensembl chr19:57,662,278...57,699,113

Ervfrd-1

endogenous retrovirus group FRD member 1, envelope

MGI:3852417 (MGI:3851857|PMID:19564597)

PMID:19564597

MGI:3851857

NCBI chr12:25,161,130...25,168,182
Ensembl chr12:25,161,130...25,168,182

Gab1

GRB2-associated binding protein 1

MGI:1926435 (MGI:1355592|PMID:10779359)

PMID:10779359

MGI:1355592

NCBI chr19:30,794,290...30,903,819
Ensembl chr19:30,794,571...30,902,008

Ggnbp2

gametogenetin binding protein 2

MGI:4072637 (MGI:5779255|PMID:26764350)

PMID:26764350

MGI:5779255

NCBI chr10:72,156,729...72,188,834
Ensembl chr10:72,156,728...72,188,308

Map2k1

mitogen activated protein kinase kinase 1

GO_REF:0000107
MGI:2178132 (MGI:1334781|PMID:10209122)

PMID:10209122

GO_REF:0000107 MGI:1334781

NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758

Pcdh12

protocadherin 12

MGI:3512625 (MGI:3804356|PMID:18477666)

PMID:18477666

MGI:3804356

NCBI chr18:31,415,533...31,431,108
Ensembl chr18:31,414,250...31,430,973

Senp2

SUMO specific peptidase 2

MGI:3832730 (MGI:3831588|PMID:19090619)

PMID:19090619

MGI:3831588

NCBI chr11:82,627,973...82,664,702
Ensembl chr11:82,630,436...82,664,630

Syde1

synapse defective Rho GTPase homolog 1

MGI:5905625 (MGI:5903668|PMID:27917469)

PMID:27917469

MGI:5903668

NCBI chr 7:14,037,646...14,043,632
Ensembl chr 7:14,037,620...14,043,779

Vash2

vasohibin 2

MGI:3846784 (MGI:5648606|PMID:25184477)

PMID:25184477

MGI:5648606

NCBI chr13:109,521,190...109,552,607
Ensembl chr13:109,521,190...109,552,589

labyrinthine layer morphogenesis

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Esx1

ESX homeobox 1

MGI:2153820 (MGI:1306980|PMID:9806555)

PMID:9806555

MGI:1306980

NCBI chr X:107,753,614...107,763,561

Gjb5

gap junction protein, beta 5

MGI:3769388 (MGI:3768289|PMID:17961533)

PMID:17961533

MGI:3768289

NCBI chr 5:145,422,034...145,440,558
Ensembl chr 5:145,422,357...145,423,172

Ncoa1

nuclear receptor coactivator 1

MGI:1276535 (MGI:5316949|PMID:20685850)

PMID:20685850

MGI:5316949

NCBI chr 6:28,677,563...28,931,844
Ensembl chr 6:28,677,540...28,931,843

Ncoa3

nuclear receptor coactivator 3

MGI:1276523 (MGI:5316949|PMID:20685850)

PMID:20685850

MGI:5316949

NCBI chr 3:162,692,176...162,788,582
Ensembl chr 3:162,692,185...162,787,548

negative regulation of cell differentiation involved in embryonic placenta development

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Snai1

snail family transcriptional repressor 1

(MGI:1270969|PMID:9676199)

PMID:9676199

MGI:1270969

NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378

positive regulation of trophectodermal cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Csf2

colony stimulating factor 2

(PMID:16792532), (PMID:24520418)

PMID:16792532 PMID:24520418

NCBI chr10:39,602,089...39,604,070
Ensembl chr10:39,602,089...39,604,070

Igf1

insulin-like growth factor 1

(PMID:24508636)
GO_REF:0000107

PMID:24508636

GO_REF:0000107

NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609

regulation of blastocyst development

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Agbl4

ATP/GTP binding protein-like 4

MGI:5788002 (MGI:6149282|PMID:29593216)

NCBI chr 5:130,742,297...131,656,581
NCBI chr 5:130,286,393...130,305,884
Ensembl chr 5:131,380,297...131,455,211
Ensembl chr 5:131,380,297...131,455,211

Klf4

Kruppel like factor 4

MGI:6392146 (MGI:6149282|PMID:29593216)

NCBI chr 5:72,283,311...72,287,669
Ensembl chr 5:72,283,313...72,287,669

Ttll1

tubulin tyrosine ligase like 1

(MGI:6149282|PMID:29593216)

NCBI chr 7:124,338,396...124,367,719
Ensembl chr 7:124,338,395...124,367,630

Ttll4

tubulin tyrosine ligase like 4

(MGI:6149282|PMID:29593216)

NCBI chr 9:81,925,363...81,961,882
Ensembl chr 9:81,940,630...81,954,686

regulation of cell differentiation involved in embryonic placenta development

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Gcm1

glial cells missing transcription factor 1

(PMID:19219068)

PMID:19219068

NCBI chr 8:85,355,766...85,369,002
Ensembl chr 8:85,355,766...85,369,002

Stk3

serine/threonine kinase 3

GO_REF:0000107
MGI:1929004 (MGI:5603236|PMID:24595170)

PMID:24595170

GO_REF:0000107 MGI:5603236

NCBI chr 7:73,617,926...73,883,896
Ensembl chr 7:73,618,644...73,883,812

Stk4

serine/threonine kinase 4

MGI:1928487 (MGI:5603236|PMID:24595170)

PMID:24595170

MGI:5603236

NCBI chr 3:160,467,552...160,546,540
Ensembl chr 3:160,467,552...160,546,540

regulation of spongiotrophoblast cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Nrk

Nik related kinase

MGI:5292103 (MGI:5287920|PMID:21715335)

PMID:21715335

MGI:5287920

NCBI chr  X:109,940,439...110,036,361
NCBI chr  X:110,065,199...110,089,124
Ensembl chr  X:109,940,350...110,033,085

Phlda2

pleckstrin homology-like domain, family A, member 2

MGI:2181542 (MGI:5749303|PMID:26476147)

PMID:26476147

MGI:5749303

NCBI chr 1:216,701,345...216,704,479
Ensembl chr 1:216,702,319...216,703,534

spongiotrophoblast cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

insulin-like growth factor 2

GO_REF:0000107
(MGI:5424276|PMID:22562201)

PMID:22562201

GO_REF:0000107 MGI:5424276

NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911

spongiotrophoblast differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ascl2

achaete-scute family bHLH transcription factor 2

MGI:2153832 (MGI:1097723|PMID:9331331)

PMID:9331331

MGI:1097723

NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409

Gjb5

gap junction protein, beta 5

MGI:3769388 (MGI:3768289|PMID:17961533)

PMID:17961533

MGI:3768289

NCBI chr 5:145,422,034...145,440,558
Ensembl chr 5:145,422,357...145,423,172

Hectd1

HECT domain E3 ubiquitin protein ligase 1

MGI:2137552 (MGI:5604339|PMID:24855001)

PMID:24855001

MGI:5604339

NCBI chr 6:72,509,658...72,596,285
Ensembl chr 6:72,510,255...72,596,446

Lif

LIF, interleukin 6 family cytokine

GO_REF:0000107
MGI:1201791 (MGI:3609466|PMID:16258063)

PMID:16258063

GO_REF:0000107 MGI:3609466

NCBI chr14:84,482,652...84,500,574
Ensembl chr14:84,482,674...84,500,642

Socs3

suppressor of cytokine signaling 3

GO_REF:0000107
MGI:2180861|MGI:96787 (MGI:3609466|PMID:16258063)

PMID:16258063

GO_REF:0000107 MGI:3609466

NCBI chr10:106,973,863...106,976,969
Ensembl chr10:106,975,178...106,976,040

spongiotrophoblast layer development

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adm

adrenomedullin

MGI:2176598 (MGI:3689296|PMID:16981008)

PMID:16981008

MGI:3689296

NCBI chr 1:175,443,189...175,447,260
Ensembl chr 1:175,445,088...175,447,259

Ascl2

achaete-scute family bHLH transcription factor 2

(PMID:12917334)

PMID:12917334

NCBI chr 1:216,154,002...216,156,409
Ensembl chr 1:216,154,002...216,156,409

Birc6

baculoviral IAP repeat-containing 6

MGI:3512417 (MGI:3511408|PMID:15485903)

PMID:15485903

MGI:3511408

NCBI chr 6:21,900,763...22,092,484
Ensembl chr 6:21,950,100...22,092,346

Cited1

Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1

MGI:3028946 (MGI:3027297|PMID:14673158)

PMID:14673158

MGI:3027297

NCBI chr X:72,128,996...72,133,692
Ensembl chr X:72,128,994...72,133,692

Fbxw8

F-box and WD repeat domain containing 8

MGI:3665136 (MGI:3653956|PMID:16880526)

PMID:16880526

MGI:3653956

NCBI chr12:44,046,204...44,138,138
Ensembl chr12:44,046,217...44,138,138

Senp2

SUMO specific peptidase 2

MGI:3832730 (MGI:3831588|PMID:19090619)

PMID:19090619

MGI:3831588

NCBI chr11:82,627,973...82,664,702
Ensembl chr11:82,630,436...82,664,630

Zfat

zinc finger and AT hook domain containing

MGI:4829941 (MGI:4822499|PMID:20660741)

PMID:20660741

MGI:4822499

NCBI chr 7:109,037,777...109,207,511
Ensembl chr 7:109,037,845...109,205,354

Zfp36l1

zinc finger protein 36, C3H type-like 1

MGI:3050540 (MGI:3047495|PMID:15226444)

PMID:15226444

MGI:3047495

NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074

spongiotrophoblast layer developmental growth

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Plac1

placenta enriched 1

MGI:3808477 (MGI:5432627|PMID:22729990)

PMID:22729990

MGI:5432627

NCBI chr  X:157,931,450...158,133,506
Ensembl chr  X:158,569,056...158,569,577
Ensembl chr  X:158,569,056...158,569,577

syncytiotrophoblast cell differentiation involved in labyrinthine layer development

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dnajb6

DnaJ heat shock protein family (Hsp40) member B6

MGI:2151092 (MGI:5294250|PMID:21972064)

PMID:21972064

MGI:5294250

NCBI chr 4:2,711,329...2,774,969
Ensembl chr 4:2,711,385...2,774,890

Fzd5

frizzled class receptor 5

GO_REF:0000107
MGI:3583769 (MGI:5494335|PMID:23610556)

PMID:23610556

GO_REF:0000107 MGI:5494335

NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739

trophectodermal cell differentiation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ada

adenosine deaminase

MGI:1857117 (MGI:1095761|PMID:9272950)

PMID:9272950

MGI:1095761

NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947

Bysl

bystin-like

GO_REF:0000107
(MGI:3700849|PMID:17242206)

PMID:17242206

GO_REF:0000107 MGI:3700849

NCBI chr 9:15,393,461...15,403,212
Ensembl chr 9:15,393,330...15,403,117

Cdh1

cadherin 1

MGI:3696711 (MGI:3695521|PMID:17138661)

PMID:17138661

MGI:3695521

NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395

Cdx2

caudal type homeo box 2

MGI:1857928 (MGI:3612803|PMID:16325584), (MGI:4819480|PMID:20404091), (MGI:5644240|PMID:25397698)

PMID:16325584 PMID:20404091 PMID:25397698

MGI:3612803 MGI:4819480 MGI:5644240

NCBI chr12:9,464,026...9,470,565
Ensembl chr12:9,464,026...9,470,565

Cited2

Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2

MGI:2176158 (MGI:3628724|PMID:16579983)

PMID:16579983

MGI:3628724

NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786

Cnot1

CCR4-NOT transcription complex, subunit 1

(MGI:5487505|PMID:22367759)

PMID:22367759

MGI:5487505

NCBI chr19:9,668,186...9,761,605
Ensembl chr19:9,668,186...9,761,605

Cnot2

CCR4-NOT transcription complex, subunit 2

(MGI:5487505|PMID:22367759)

PMID:22367759

MGI:5487505

NCBI chr 7:59,526,105...59,617,307
Ensembl chr 7:59,527,124...59,587,385

Cnot3

CCR4-NOT transcription complex, subunit 3

(MGI:5487505|PMID:22367759)

PMID:22367759

MGI:5487505

NCBI chr 1:64,130,823...64,147,066
Ensembl chr 1:64,130,908...64,147,251

CTR9 homolog, Paf1/RNA polymerase II complex component

(MGI:5528755|PMID:24036311)

NCBI chr 1:175,839,140...175,869,167
Ensembl chr 1:175,839,108...175,869,165

Eomes

eomesodermin

MGI:101893 (MGI:3612803|PMID:16325584)

PMID:16325584

MGI:3612803

NCBI chr 8:127,144,367...127,152,618
Ensembl chr 8:127,144,903...127,151,493

Foxd3

forkhead box D3

MGI:2388719 (MGI:3604420|PMID:16039639)

PMID:16039639

MGI:3604420

NCBI chr 5:118,346,283...118,349,120

Hand1

heart and neural crest derivatives expressed 1

(PMID:11802795)

PMID:11802795

NCBI chr10:43,250,729...43,253,296
Ensembl chr10:43,250,745...43,253,296

Hopx

HOP homeobox

(PMID:17576768)
MGI:2389233 (MGI:3722454|PMID:17576768)

PMID:17576768

MGI:3722454

NCBI chr14:33,354,803...33,362,547
Ensembl chr14:33,354,807...33,362,551

Junb

JunB proto-oncogene, AP-1 transcription factor subunit

GO_REF:0000107
MGI:2153821 (MGI:1332277|PMID:10022836), (MGI:2138058|PMID:11456449)

PMID:10022836 PMID:11456449

GO_REF:0000107 MGI:1332277 MGI:2138058

NCBI chr19:26,092,972...26,094,756
Ensembl chr19:26,092,974...26,094,756

Nodal

nodal growth differentiation factor

(MGI:2138058|PMID:11456449)

PMID:11456449

MGI:2138058

NCBI chr20:31,035,729...31,044,096
Ensembl chr20:31,035,729...31,044,096

Pou5f1

POU class 5 homeobox 1

MGI:1201683 (MGI:3612803|PMID:16325584)

PMID:16325584

MGI:3612803

NCBI chr20:3,747,231...3,751,994
Ensembl chr20:3,747,221...3,751,994

Rbm46

RNA binding motif protein 46

(MGI:5644240|PMID:25397698)

PMID:25397698

MGI:5644240

NCBI chr 2:181,828,931...181,874,223
Ensembl chr 2:181,831,244...181,874,223

Sp1

Sp1 transcription factor

MGI:1277166 (MGI:3717030|PMID:17584888)

NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629

Sp3

Sp3 transcription factor

MGI:98372 (MGI:3717030|PMID:17584888)

NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692

Srf

serum response factor

(PMID:17576768)

PMID:17576768

NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225

Tfap2c

transcription factor AP-2 gamma

MGI:3040993 (MGI:4819480|PMID:20404091)

PMID:20404091

MGI:4819480

NCBI chr 3:170,550,314...170,558,197
Ensembl chr 3:170,550,314...170,558,194

Yap1

Yes1 associated transcriptional regulator

MGI:3056522|MGI:4819826 (MGI:6116315|PMID:26902285)
GO_REF:0000107

GO_REF:0000107 MGI:6116315

NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579

trophectodermal cell fate commitment

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Prickle2

prickle planar cell polarity protein 2

MGI:4941925 (MGI:5319591|PMID:22333836)

PMID:22333836

MGI:5319591

NCBI chr 4:124,238,167...124,584,176
Ensembl chr 4:124,238,167...124,338,176

Tead4

TEA domain transcription factor 4

MGI:106907 (MGI:3770613|PMID:18083014)

PMID:18083014

MGI:3770613

NCBI chr 4:161,542,566...161,619,848
Ensembl chr 4:161,540,130...161,587,222

trophectodermal cell proliferation

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Acvr1c

activin A receptor type 1C

(PMID:15150278)
GO_REF:0000107

PMID:15150278

GO_REF:0000107

NCBI chr 3:44,272,859...44,342,501
Ensembl chr 3:44,270,653...44,342,355

Dicer1

dicer 1 ribonuclease III

(MGI:4829413|PMID:20708584)

PMID:20708584

MGI:4829413

NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183

Esrrb

estrogen-related receptor beta

MGI:1857422 (MGI:1095811|PMID:9285590)

PMID:9285590

MGI:1095811

NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906

Zpr1

ZPR1 zinc finger

(MGI:3575865|PMID:15767679)