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ONTOLOGY REPORT - ANNOTATIONS


Term:histamine metabolic process
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Accession:GO:0001692 term browser browse the term
Definition:The chemical reactions and pathways involving histamine, a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.
Synonyms:exact_synonym: histamine metabolism


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histamine metabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdc histidine decarboxylase IDA RGD PMID:4449071, PMID:5898, PMID:7075603, PMID:9525922 RGD:2303726, RGD:2303727, RGD:2303728, RGD:2303735 NCBI chr 3:119,057,524...119,075,599
Ensembl chr 3:119,057,517...119,075,619
JBrowse link
G Hnmt histamine N-methyltransferase ISO (PMID:23505051) RGD PMID:23505051 NCBI chr 3:905,111...937,038
Ensembl chr 3:904,765...937,102
JBrowse link
G Trh thyrotropin releasing hormone IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:17760865, PMID:21873635 RGD:7241067, RGD:13792537 NCBI chr 4:124,110,716...124,113,242
Ensembl chr 4:124,110,716...124,113,242
JBrowse link
histamine biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdc histidine decarboxylase IEA
IBA
ISO
GO_REF:0000041
PMID:21873635
MGI:2182618 (MGI:2138019|PMID:11478947)
GO_REF:0000107
(PMID:22767596)
UniProt
RGD
Ensembl
PMID:11478947 PMID:22767596, PMID:21873635 GO_REF:0000041 GO_REF:0000107 MGI:2138019, RGD:13792537 NCBI chr 3:119,057,524...119,075,599
Ensembl chr 3:119,057,517...119,075,619
JBrowse link
G Prg3 proteoglycan 3, pro eosinophil major basic protein 2 ISO (PMID:10318872) RGD PMID:10318872 NCBI chr 3:72,395,194...72,401,254
Ensembl chr 3:72,395,218...72,401,318
JBrowse link
histamine catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnmt histamine N-methyltransferase ISO
ISS
(PMID:26206890)
GO_REF:0000024
RGD
UniProt
PMID:26206890 GO_REF:0000024 NCBI chr 3:905,111...937,038
Ensembl chr 3:904,765...937,102
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      nitrogen compound metabolic process 10212
        ammonium ion metabolic process 26
          histamine metabolic process 4
            histamine biosynthetic process 2
            histamine catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 20030
    metabolic process 12185
      organic substance metabolic process 11552
        organonitrogen compound metabolic process 6949
          amine metabolic process 121
            cellular amine metabolic process 113
              cellular biogenic amine metabolic process 100
                histamine metabolic process 4
                  histamine biosynthetic process 2
                  histamine catabolic process 1
paths to the root