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ONTOLOGY REPORT - ANNOTATIONS

Term:long-chain fatty acid metabolic process
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Accession:GO:0001676 term browser browse the term
Definition:The chemical reactions and pathways involving a long-chain fatty acid. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.
Comment:While there is not universal consensus on the lengths of short-, medium-, long- and very-long-chain fatty acids, the GO uses the definitions in ChEBI (see CHEBI:26666, CHEBI:59554, CHEBI:15904 and CHEBI:27283).
Synonyms:exact_synonym: long-chain fatty acid metabolism

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long-chain fatty acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAD9 acyl-CoA dehydrogenase family member 9 involved_in ISO (PMID:16020546) BHF-UCL PMID:16020546 NCBI chr22:52,143,869...52,166,123
Ensembl chr22:52,144,454...52,169,365 		JBrowse link
G ACOT4 acyl-CoA thioesterase 4 involved_in ISO (PMID:16940157) HGNC-UCL PMID:16940157 NCBI chr24:50,806,736...50,811,294
Ensembl chr24:50,807,212...50,811,181 		JBrowse link
G ACOT9 acyl-CoA thioesterase 9 involved_in ISO (MGI:6718236|PMID:23864032) UniProt PMID:23864032 MGI:6718236 NCBI chr  X:22,152,651...22,190,536
Ensembl chr  X:22,151,384...22,190,505 		JBrowse link
G ACSBG1 acyl-CoA synthetase bubblegum family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:5,117,740...5,183,164
Ensembl chr26:5,117,818...5,185,418 		JBrowse link
G ACSBG2 acyl-CoA synthetase bubblegum family member 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:5,778,036...5,824,597 JBrowse link
G ACSL1 acyl-CoA synthetase long chain family member 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:130,712,633...130,783,360
Ensembl chr 7:130,712,308...130,763,756 		JBrowse link
G ACSL3 acyl-CoA synthetase long chain family member 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:108,787,341...108,867,523
Ensembl chr10:108,787,061...108,869,042 		JBrowse link
G ACSL4 acyl-CoA synthetase long chain family member 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:97,488,414...97,575,251 JBrowse link
G ACSL5 acyl-CoA synthetase long chain family member 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:105,259,546...105,311,500
Ensembl chr 9:105,257,429...105,311,690 		JBrowse link
G ACSL6 acyl-CoA synthetase long chain family member 6 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:1569043 GO_REF:0000107 GO_REF:0000118 RGD:69376 NCBI chr23:34,787,097...34,846,387
Ensembl chr23:34,787,432...34,829,042 		JBrowse link
G ACSM1 acyl-CoA synthetase medium chain family member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 5:18,784,055...18,841,881
Ensembl chr 5:18,784,210...18,842,609 		JBrowse link
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in IEA UniProt GO_REF:0000117 NCBI chr16:6,355,795...6,370,051
Ensembl chr16:6,356,058...6,369,738 		JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type involved_in IEA UniProt GO_REF:0000117 NCBI chr16:7,454,950...7,470,949
Ensembl chr16:7,455,044...7,469,934 		JBrowse link
G ALOX15B arachidonate 15-lipoxygenase type B involved_in IEA UniProt GO_REF:0000117 NCBI chr16:7,425,533...7,435,896
Ensembl chr16:7,425,990...7,435,327 		JBrowse link
G ALOX5 arachidonate 5-lipoxygenase involved_in IEA UniProt GO_REF:0000117 NCBI chr 9:41,085,257...41,145,760
Ensembl chr 9:41,085,361...41,145,331 		JBrowse link
G ALOXE3 arachidonate epidermal lipoxygenase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr16:7,478,775...7,500,931
Ensembl chr16:7,478,793...7,500,428 		JBrowse link
G CD36 CD36 molecule (CD36 blood group) ISO RGD PMID:15161924 RGD:1598388 NCBI chr21:68,214,875...68,309,336
Ensembl chr21:68,216,201...68,268,669 		JBrowse link
G CPT1A carnitine palmitoyltransferase 1A involved_in ISO
IEA		 RGD
Ensembl		 PMID:19302064 GO_REF:0000107 RGD:2311346 NCBI chr 1:5,704,275...5,784,077
Ensembl chr 1:5,730,853...5,784,337 		JBrowse link
G CPT2 carnitine palmitoyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:79,710,638...79,728,100
Ensembl chr20:79,706,584...79,727,689 		JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:8,753,236...8,759,378
Ensembl chr26:8,753,327...8,759,384 		JBrowse link
G CYP2C19 cytochrome P450 family 2 subfamily C member 19 involved_in ISO (PMID:18577768) UniProt PMID:18577768 NCBI chr 9:87,981,300...88,025,007 JBrowse link
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 involved_in ISO (PMID:18577768) UniProt PMID:18577768 NCBI chr26:53,390,054...53,403,309
Ensembl chr26:53,390,089...53,404,211 		JBrowse link
G LOC119621490 long-chain-fatty-acid--CoA ligase 4-like involved_in IEA TreeGrafter GO_REF:0000118
G PAM peptidylglycine alpha-amidating monooxygenase ISO N-myristoylglycine RGD PMID:8660675 RGD:6483540 NCBI chr23:6,316,428...6,482,959
Ensembl chr23:6,316,428...6,486,751 		JBrowse link
G PNPLA3 patatin like phospholipase domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:26,435,302...26,458,368
Ensembl chr19:26,435,599...26,462,210 		JBrowse link
G SLC27A1 solute carrier family 27 member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:15,967,126...15,995,039 JBrowse link
G SLC27A2 solute carrier family 27 member 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12048192) MGI
GOC		 PMID:12048192 GO_REF:0000108 NCBI chr26:33,080,844...33,134,467
Ensembl chr26:33,083,317...33,134,433 		JBrowse link
G SLC27A3 solute carrier family 27 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:10,031,007...10,037,082
Ensembl chr20:10,031,164...10,035,876 		JBrowse link
G SLC27A4 solute carrier family 27 member 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:22022213)
(PMID:11404000), (PMID:15653672)		 UniProt
MGI		 PMID:11404000 PMID:15653672 PMID:22022213 NCBI chr12:9,769,242...9,788,214 JBrowse link
G SLC27A4 solute carrier family 27 member 4 involved_in IEA GOC GO_REF:0000108 Ensembl chr12:9,769,974...9,786,464 JBrowse link
G SLC27A5 solute carrier family 27 member 5 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:50,782,713...50,793,816
Ensembl chr 6:50,781,544...50,792,515 		JBrowse link
G SLC27A6 solute carrier family 27 member 6 involved_in IEA GOC GO_REF:0000108 NCBI chr23:31,911,865...31,981,217
Ensembl chr23:31,913,575...31,981,147 		JBrowse link
arachidonate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:6,355,795...6,370,051
Ensembl chr16:6,356,058...6,369,738 		JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:7,454,950...7,470,949
Ensembl chr16:7,455,044...7,469,934 		JBrowse link
G ALOX15 arachidonate 15-lipoxygenase involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
Ensembl		 PMID:8117750 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:70288 NCBI chr16:4,112,795...4,121,764
Ensembl chr16:4,111,151...4,121,645 		JBrowse link
G ALOX15B arachidonate 15-lipoxygenase type B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:7,425,533...7,435,896
Ensembl chr16:7,425,990...7,435,327 		JBrowse link
G ALOX5 arachidonate 5-lipoxygenase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:41,085,257...41,145,760
Ensembl chr 9:41,085,361...41,145,331 		JBrowse link
G ALOXE3 arachidonate epidermal lipoxygenase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:7,478,775...7,500,931
Ensembl chr16:7,478,793...7,500,428 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:69,318,713...69,327,277
Ensembl chr14:69,319,495...69,324,157 		JBrowse link
G CYP2C19 cytochrome P450 family 2 subfamily C member 19 involved_in ISO (MGI:1277710|PMID:9721182) UniProt PMID:9721182 MGI:1277710 NCBI chr 9:87,981,300...88,025,007 JBrowse link
G CYP2C8 cytochrome P450 family 2 subfamily C member 8 involved_in ISO (MGI:1277710|PMID:9721182) UniProt PMID:9721182 MGI:1277710 NCBI chr 9:88,154,131...88,183,915
Ensembl chr 9:88,154,134...88,183,458 		JBrowse link
G CYP2D6 cytochrome P450 family 2 subfamily D member 6 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:10945868 GO_REF:0000118 RGD:1599723 NCBI chr19:24,667,207...24,672,580
Ensembl chr19:24,667,282...24,671,513 		JBrowse link
G CYP2D8 cytochrome P450 family 2 subfamily D member 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:24,683,186...24,689,557
Ensembl chr19:24,683,260...24,688,691 		JBrowse link
G CYP2J2 cytochrome P450 family 2 subfamily J member 2 ISO RGD PMID:9143331 RGD:632631 NCBI chr20:73,083,312...73,115,174
Ensembl chr20:73,083,389...73,115,077 		JBrowse link
G CYP4A22 cytochrome P450 family 4 subfamily A member 22 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:85,805,995...85,817,243 JBrowse link
G CYP4F11 cytochrome P450 family 4 subfamily F member 11 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:14,460,588...14,482,294
Ensembl chr 6:14,426,592...14,481,523 		JBrowse link
G CYP4F12 cytochrome P450 family 4 subfamily F member 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:14,295,911...14,317,353
Ensembl chr 6:14,296,417...14,317,289 		JBrowse link
G CYP4F3 cytochrome P450 family 4 subfamily F member 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:14,241,352...14,260,799
Ensembl chr 6:14,241,409...14,263,494 		JBrowse link
G CYP4F57 cytochrome P450 family 4 subfamily F member 57 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:14,266,404...14,289,290
Ensembl chr 6:14,267,401...14,288,474 		JBrowse link
G CYP4F8 cytochrome P450 family 4 subfamily F member 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:14,211,899...14,229,793
Ensembl chr 6:14,215,337...14,229,509 		JBrowse link
G DAGLA diacylglycerol lipase alpha acts_upstream_of
involved_in		 ISO
IEA		 (PMID:20147530) MGI
TreeGrafter		 PMID:20147530 GO_REF:0000118 NCBI chr 1:12,110,100...12,175,935
Ensembl chr 1:12,108,810...12,136,105 		JBrowse link
G DAGLB diacylglycerol lipase beta acts_upstream_of
involved_in		 ISO
IEA		 (PMID:20147530) MGI
TreeGrafter		 PMID:20147530 GO_REF:0000118 NCBI chr28:15,616,744...15,660,829
Ensembl chr28:15,617,459...15,659,291 		JBrowse link
G EPHX1 epoxide hydrolase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:3,924,396...3,960,264
Ensembl chr25:3,924,606...3,945,535 		JBrowse link
G FADS1 fatty acid desaturase 1 ISO RGD PMID:11414679 RGD:632758 NCBI chr 1:12,037,173...12,051,907
Ensembl chr 1:12,037,513...12,055,159 		JBrowse link
G GPX1 glutathione peroxidase 1 involved_in ISO (MGI:893248|PMID:9195979)
(PMID:11115402)		 UniProt PMID:9195979 PMID:11115402 MGI:893248 NCBI chr22:10,754,976...10,756,617 JBrowse link
G GPX1 glutathione peroxidase 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr22:10,754,970...10,757,057 JBrowse link
G GPX4 glutathione peroxidase 4 involved_in ISO (PMID:11115402) UniProt PMID:11115402 NCBI chr 6:873,867...876,225 JBrowse link
G LOC103234089 cytochrome P450 4F2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:14,426,588...14,447,276 JBrowse link
G LOC119624464 cytochrome P450 4A11-like involved_in IEA TreeGrafter GO_REF:0000118
G MAPK3 mitogen-activated protein kinase 3 ISO RGD PMID:15027896 RGD:1626220 NCBI chr 5:26,536,471...26,545,666
Ensembl chr 5:26,536,532...26,546,461 		JBrowse link
G MGLL monoglyceride lipase involved_in ISO (MGI:4836780|PMID:20729846) UniProt PMID:20729846 MGI:4836780 NCBI chr22:53,092,970...53,354,316
Ensembl chr22:53,218,672...53,354,448 		JBrowse link
G PLA2G2F phospholipase A2 group IIF involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:112,402,892...112,428,971
Ensembl chr20:112,401,601...112,424,824 		JBrowse link
G PLA2G4A phospholipase A2 group IVA involved_in ISO
IEA		 RGD
Ensembl		 PMID:16603549 GO_REF:0000107 RGD:1642459 NCBI chr25:42,443,480...42,590,895
Ensembl chr25:42,443,385...42,590,431 		JBrowse link
G PNPLA8 patatin like phospholipase domain containing 8 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:77,385,923...77,437,894
Ensembl chr21:77,385,537...77,437,860 		JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDKRB1 bradykinin receptor B1 involved_in ISO (PMID:23846981) AgBase PMID:23846981 NCBI chr24:74,136,464...74,146,668
Ensembl chr24:74,145,531...74,146,592 		JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:17,195,403...17,218,450
Ensembl chr12:17,192,628...17,218,315 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:1419907) MGI
TreeGrafter		 PMID:1419907 GO_REF:0000118 NCBI chr25:42,733,535...42,742,463
Ensembl chr25:42,734,771...42,742,429 		JBrowse link
G SCO1 SCO1, cytochrome c oxidase assembly protein acts_upstream_of_or_within ISO (PMID:28973536) MGI PMID:28973536 NCBI chr16:10,021,480...10,036,920 JBrowse link
G SPHK1 sphingosine kinase 1 ISO RGD PMID:18723875 RGD:2311353 NCBI chr16:45,290,147...45,295,175
Ensembl chr16:45,290,421...45,293,128 		JBrowse link
epoxygenase P450 pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2A23 cytochrome P450 family 2 subfamily A member 23 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:35,351,235...35,361,375 JBrowse link
G CYP2A23 cytochrome P450 family 2 subfamily A member 23 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 6:35,353,932...35,361,085 JBrowse link
G CYP2A24 cytochrome P450 family 2 subfamily A member 24 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:35,314,507...35,322,700
Ensembl chr 6:35,314,764...35,321,400 		JBrowse link
G CYP2A28 cytochrome P450 family 2 subfamily A member 28 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:35,452,676...35,461,063
Ensembl chr 6:35,453,288...35,460,823 		JBrowse link
G CYP2B6 cytochrome P450 family 2 subfamily B member 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:35,392,699...35,418,171
Ensembl chr 6:35,393,342...35,418,106 		JBrowse link
G CYP2C8 cytochrome P450 family 2 subfamily C member 8 involved_in ISO (PMID:7574697) UniProt PMID:7574697 NCBI chr 9:88,154,131...88,183,915
Ensembl chr 9:88,154,134...88,183,458 		JBrowse link
G CYP2C9 cytochrome P450 family 2 subfamily C member 9 involved_in ISO (PMID:7574697)
PMID:10491410		 UniProt PMID:7574697 PMID:10491410 RGD:39458017 NCBI chr 9:88,082,124...88,125,390 JBrowse link
G CYP2C9 cytochrome P450 family 2 subfamily C member 9 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 9:87,938,712...88,125,658 JBrowse link
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:53,390,054...53,403,309
Ensembl chr26:53,390,089...53,404,211 		JBrowse link
G CYP2G2 cytochrome P450 family 2 subfamily G member 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:35,423,727...35,436,361
Ensembl chr 6:35,424,076...35,435,896 		JBrowse link
G CYP2J2 cytochrome P450 family 2 subfamily J member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:73,083,312...73,115,174
Ensembl chr20:73,083,389...73,115,077 		JBrowse link
G CYP2S1 cytochrome P450 family 2 subfamily S member 1 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 6:35,513,232...35,520,745 JBrowse link
hepoxilin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:6,355,795...6,370,051
Ensembl chr16:6,356,058...6,369,738 		JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:7,454,950...7,470,949
Ensembl chr16:7,455,044...7,469,934 		JBrowse link
G ALOX15 arachidonate 15-lipoxygenase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:15123652 GO_REF:0000118 RGD:5509794 NCBI chr16:4,112,795...4,121,764
Ensembl chr16:4,111,151...4,121,645 		JBrowse link
G ALOX15B arachidonate 15-lipoxygenase type B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:7,425,533...7,435,896
Ensembl chr16:7,425,990...7,435,327 		JBrowse link
G ALOX5 arachidonate 5-lipoxygenase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:41,085,257...41,145,760
Ensembl chr 9:41,085,361...41,145,331 		JBrowse link
G ALOXE3 arachidonate epidermal lipoxygenase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:7,478,775...7,500,931
Ensembl chr16:7,478,793...7,500,428 		JBrowse link
G GSTP1 glutathione S-transferase pi 1 involved_in ISO (PMID:21046276) UniProt PMID:21046276 NCBI chr 1:6,676,897...6,679,936 JBrowse link
G LOC103224275 glutathione S-transferase Mu 1 involved_in ISO (PMID:21046276) UniProt PMID:21046276 NCBI chr20:23,854,969...23,861,634 JBrowse link
leukotriene A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX5 arachidonate 5-lipoxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:41,085,257...41,145,760
Ensembl chr 9:41,085,361...41,145,331 		JBrowse link
leukotriene A4 metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type NOT|involved_in ISO
IEA		 (PMID:1851637) UniProt
Ensembl		 PMID:1851637 GO_REF:0000107 NCBI chr16:6,355,795...6,370,051
Ensembl chr16:6,356,058...6,369,738 		JBrowse link
leukotriene B4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP4F3 cytochrome P450 family 4 subfamily F member 3 involved_in ISO (PMID:11461919), (PMID:9675028) UniProt PMID:9675028 PMID:11461919 NCBI chr 6:14,241,352...14,260,799
Ensembl chr 6:14,241,409...14,263,494 		JBrowse link
leukotriene B4 metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP4F3 cytochrome P450 family 4 subfamily F member 3 involved_in ISO (MGI:3640626|PMID:16380383) UniProt PMID:16380383 MGI:3640626 NCBI chr 6:14,241,352...14,260,799
Ensembl chr 6:14,241,409...14,263,494 		JBrowse link
G PTGR1 prostaglandin reductase 1 involved_in ISO (PMID:8394361) UniProt
RGD		 PMID:8394361 PMID:9667737 RGD:401959219 NCBI chr12:27,918,990...27,999,736 JBrowse link
linoleic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type NOT|involved_in ISO
IEA		 (PMID:1851637) UniProt
TreeGrafter
Ensembl		 PMID:1851637 GO_REF:0000107 GO_REF:0000118 NCBI chr16:6,355,795...6,370,051
Ensembl chr16:6,356,058...6,369,738 		JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:7,454,950...7,470,949
Ensembl chr16:7,455,044...7,469,934 		JBrowse link
G ALOX15 arachidonate 15-lipoxygenase involved_in
part_of		 IEA
ISO		 Ensembl
TreeGrafter
RGD		 PMID:34958945 GO_REF:0000107 GO_REF:0000118 RGD:401900155 NCBI chr16:4,112,795...4,121,764
Ensembl chr16:4,111,151...4,121,645 		JBrowse link
G ALOX15B arachidonate 15-lipoxygenase type B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:7,425,533...7,435,896
Ensembl chr16:7,425,990...7,435,327 		JBrowse link
G ALOX5 arachidonate 5-lipoxygenase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:41,085,257...41,145,760
Ensembl chr 9:41,085,361...41,145,331 		JBrowse link
G ALOXE3 arachidonate epidermal lipoxygenase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:7,478,775...7,500,931
Ensembl chr16:7,478,793...7,500,428 		JBrowse link
G CYP1A2 cytochrome P450 family 1 subfamily A member 2 part_of ISO RGD PMID:34958945 RGD:401900155 NCBI chr26:8,727,996...8,733,254 JBrowse link
G CYP2J2 cytochrome P450 family 2 subfamily J member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:73,083,312...73,115,174
Ensembl chr20:73,083,389...73,115,077 		JBrowse link
G CYP4A22 cytochrome P450 family 4 subfamily A member 22 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:85,805,995...85,817,243 JBrowse link
G EPHX2 epoxide hydrolase 2 ISO RGD PMID:16962614 RGD:5688387 NCBI chr 8:25,603,668...25,659,232
Ensembl chr 8:25,603,735...25,659,345 		JBrowse link
G GSTP1 glutathione S-transferase pi 1 involved_in ISO (PMID:16624487) BHF-UCL PMID:16624487 NCBI chr 1:6,676,897...6,679,936 JBrowse link
G LOC103221354 glutathione S-transferase A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:19,726,261...19,743,939
Ensembl chr17:19,726,106...19,744,247 		JBrowse link
G LOC119624464 cytochrome P450 4A11-like involved_in IEA TreeGrafter GO_REF:0000118
G PNPLA8 patatin like phospholipase domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:77,385,923...77,437,894
Ensembl chr21:77,385,537...77,437,860 		JBrowse link
lipoxin A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:6,355,795...6,370,051
Ensembl chr16:6,356,058...6,369,738 		JBrowse link
G ALOX15 arachidonate 15-lipoxygenase involved_in ISO (MGI:3579746|PMID:15708862) UniProt PMID:15708862 MGI:3579746 NCBI chr16:4,112,795...4,121,764
Ensembl chr16:4,111,151...4,121,645 		JBrowse link
G ALOX15B arachidonate 15-lipoxygenase type B involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:7,425,533...7,435,896
Ensembl chr16:7,425,990...7,435,327 		JBrowse link
lipoxin A4 metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP4F3 cytochrome P450 family 4 subfamily F member 3 involved_in ISO (PMID:15364545) UniProt PMID:15364545 NCBI chr 6:14,241,352...14,260,799
Ensembl chr 6:14,241,409...14,263,494 		JBrowse link
G PTGR1 prostaglandin reductase 1 involved_in ISO (PMID:11688989) UniProt PMID:11688989 NCBI chr12:27,918,990...27,999,736 JBrowse link
lipoxin B4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:6,355,795...6,370,051
Ensembl chr16:6,356,058...6,369,738 		JBrowse link
lipoxin B4 metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP4F3 cytochrome P450 family 4 subfamily F member 3 involved_in ISO (PMID:15364545) UniProt PMID:15364545 NCBI chr 6:14,241,352...14,260,799
Ensembl chr 6:14,241,409...14,263,494 		JBrowse link
long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSBG1 acyl-CoA synthetase bubblegum family member 1 ISO RGD PMID:11381125 RGD:68727 NCBI chr26:5,117,740...5,183,164
Ensembl chr26:5,117,818...5,185,418 		JBrowse link
G ASAH2 N-acylsphingosine amidohydrolase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:80,409,649...80,501,527
Ensembl chr 9:80,409,478...80,476,731 		JBrowse link
G ELOVL6 ELOVL fatty acid elongase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:57,949,910...58,095,637 JBrowse link
G FADS1 fatty acid desaturase 1 acts_upstream_of_or_within ISO (PMID:10601301) MGI PMID:10601301 NCBI chr 1:12,037,173...12,051,907
Ensembl chr 1:12,037,513...12,055,159 		JBrowse link
G LOC103224273 glutathione S-transferase Mu 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:23,885,520...23,891,229
Ensembl chr20:23,855,246...23,890,926 		JBrowse link
G LTC4S leukotriene C4 synthase involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chr23:81,523,784...81,526,297
Ensembl chr23:81,523,775...81,526,179 		JBrowse link
G MYO5A myosin VA acts_upstream_of_or_within ISO (PMID:1150661) MGI PMID:1150661 NCBI chr26:30,865,947...31,085,184 JBrowse link
G PLP1 proteolipid protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:1150661) Ensembl
MGI		 PMID:1150661 GO_REF:0000107 NCBI chr  X:91,671,535...91,687,693
Ensembl chr  X:91,671,878...91,687,878 		JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (PMID:1150661) MGI PMID:1150661 NCBI chr13:91,045,167...91,206,190
Ensembl chr13:91,045,209...91,208,471 		JBrowse link
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:23671276)
(PMID:18757502)		 UniProt PMID:18757502 PMID:23671276 NCBI chr  X:128,152,697...128,171,007 JBrowse link
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO
IEA		 RGD
InterPro		 PMID:3968063 GO_REF:0000002 RGD:2317678 NCBI chr10:95,886,502...95,925,928
Ensembl chr10:95,887,465...95,925,578 		JBrowse link
G ADTRP androgen dependent TFPI regulating protein involved_in ISO (PMID:27018888) UniProt PMID:27018888 NCBI chr17:60,371,412...60,436,988
Ensembl chr17:60,368,546...60,438,864 		JBrowse link
G AIG1 androgen induced 1 involved_in ISO (PMID:27018888) UniProt PMID:27018888 NCBI chr13:29,903,099...30,180,050
Ensembl chr13:30,078,019...30,180,012 		JBrowse link
G LIPE lipase E, hormone sensitive type acts_upstream_of_or_within ISO (PMID:16804080) MGI PMID:16804080 NCBI chr 6:36,604,822...36,630,648
Ensembl chr 6:36,605,126...36,630,376 		JBrowse link
omega-hydroxylase P450 pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor ISO RGD PMID:19889059 RGD:401794453 NCBI chr21:40,778,198...40,826,491
Ensembl chr21:40,778,218...40,826,478 		JBrowse link
G CYP2U1 cytochrome P450 family 2 subfamily U member 1 involved_in ISO (PMID:24563460) UniProt PMID:24563460 NCBI chr 7:55,859,669...55,880,266
Ensembl chr 7:55,859,849...55,879,280 		JBrowse link
G CYP4F11 cytochrome P450 family 4 subfamily F member 11 involved_in ISO (PMID:15364545) UniProt PMID:15364545 NCBI chr 6:14,460,588...14,482,294
Ensembl chr 6:14,426,592...14,481,523 		JBrowse link
G CYP4F3 cytochrome P450 family 4 subfamily F member 3 involved_in ISO (PMID:15364545), (PMID:18577768) UniProt PMID:15364545 PMID:18577768 NCBI chr 6:14,241,352...14,260,799
Ensembl chr 6:14,241,409...14,263,494 		JBrowse link
palmitic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:125,345,636...125,474,650
Ensembl chr20:125,345,670...125,474,690 		JBrowse link
phytanic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD3 ATP binding cassette subfamily D member 3 involved_in ISO (MGI:5613029|PMID:25168382) UniProt PMID:25168382 MGI:5613029 NCBI chr20:38,750,147...38,846,011
Ensembl chr20:38,748,787...38,845,989 		JBrowse link
G HACL1 2-hydroxyacyl-CoA lyase 1 involved_in ISO (PMID:28289220) UniProt PMID:28289220 NCBI chr15:60,360,380...60,433,528
Ensembl chr15:60,322,722...60,433,647 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17080
    metabolic process 11165
      cellular metabolic process 9346
        cellular lipid metabolic process 985
          fatty acid metabolic process 386
            long-chain fatty acid metabolic process 95
              alpha-linolenic acid metabolic process 0
              arachidonate metabolic process + 49
              hepoxilin metabolic process + 8
              jasmonic acid metabolic process + 0
              leukotriene A4 metabolic process + 2
              leukotriene B4 metabolic process + 2
              linoleic acid metabolic process 14
              lipoxin A4 metabolic process + 5
              lipoxin B4 metabolic process + 2
              long-chain fatty acid biosynthetic process + 18
              long-chain fatty acid catabolic process + 6
              palmitic acid metabolic process + 1
              phytanic acid metabolic process 2
Path 2
Term Annotations click to browse term
  biological_process 17080
    metabolic process 11165
      cellular metabolic process 9346
        organic acid metabolic process 913
          oxoacid metabolic process 906
            carboxylic acid metabolic process 890
              monocarboxylic acid metabolic process 617
                fatty acid metabolic process 386
                  long-chain fatty acid metabolic process 95
                    alpha-linolenic acid metabolic process 0
                    arachidonate metabolic process + 49
                    hepoxilin metabolic process + 8
                    jasmonic acid metabolic process + 0
                    leukotriene A4 metabolic process + 2
                    leukotriene B4 metabolic process + 2
                    linoleic acid metabolic process 14
                    lipoxin A4 metabolic process + 5
                    lipoxin B4 metabolic process + 2
                    long-chain fatty acid biosynthetic process + 18
                    long-chain fatty acid catabolic process + 6
                    palmitic acid metabolic process + 1
                    phytanic acid metabolic process 2
paths to the root