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ONTOLOGY REPORT - ANNOTATIONS


Term:long-chain fatty acid metabolic process
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Accession:GO:0001676 term browser browse the term
Definition:The chemical reactions and pathways involving long-chain fatty acids, A long-chain fatty acid is a fatty acid with a chain length between C13 and C22.
Synonyms:exact_synonym: long-chain fatty acid metabolism



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long-chain fatty acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad9 acyl-CoA dehydrogenase family, member 9 involved_in ISO (PMID:16020546) RGD PMID:16020546 NCBI chr 2:118,943,170...118,966,150
Ensembl chr 2:118,943,174...118,966,547
JBrowse link
G Acot1 acyl-CoA thioesterase 1 involved_in
acts_upstream_of_or_within
IDA
ISO
PMID:7906114
(MGI:2158077|PMID:11694534)
(PMID:16940157)
RGD PMID:11694534 PMID:16940157 PMID:7906114 MGI:2158077, RGD:14390064 NCBI chr 6:103,636,173...103,644,167
Ensembl chr 6:103,636,041...103,644,163
JBrowse link
G Acot2 acyl-CoA thioesterase 2 involved_in ISO (PMID:16940157) RGD PMID:16940157 NCBI chr 6:103,611,744...103,619,404
Ensembl chr 6:103,611,544...103,619,245
JBrowse link
G Acot3 acyl-CoA thioesterase 3 involved_in ISO (MGI:3663233|PMID:16940157) RGD PMID:16940157 MGI:3663233 NCBI chr 6:103,682,518...103,688,735
Ensembl chr 6:103,682,596...103,688,427
JBrowse link
G Acot4 acyl-CoA thioesterase 4 involved_in ISO (PMID:16940157) RGD PMID:16940157 NCBI chr 6:103,668,699...103,674,037
Ensembl chr 6:103,668,753...103,673,917
JBrowse link
G Acot9 acyl-CoA thioesterase 9 involved_in ISO (MGI:6718236|PMID:23864032) RGD PMID:23864032 MGI:6718236 NCBI chr  X:40,073,197...40,123,573
Ensembl chr  X:40,064,810...40,123,559
JBrowse link
G Acsbg1 acyl-CoA synthetase bubblegum family member 1 involved_in ISO
ISS
(PMID:10954726), (PMID:24269233)
GO_REF:0000024
RGD
HGNC-UCL
PMID:10954726 PMID:24269233 GO_REF:0000024 NCBI chr 8:54,991,294...55,047,276
Ensembl chr 8:54,991,296...55,047,391
JBrowse link
G Acsbg2 acyl-CoA synthetase bubblegum family member 2 acts_upstream_of_or_within ISO (MGI:3640147|PMID:16371355) RGD PMID:16371355 MGI:3640147 NCBI chr 9:1,683,846...1,715,517
Ensembl chr 9:1,683,847...1,714,518
JBrowse link
G Acsl1 acyl-CoA synthetase long-chain family member 1 involved_in IDA
ISS
ISO
PMID:28209804
PMID:10749848
GO_REF:0000024
(PMID:22022213), (PMID:24269233)
UniProt
RGD
PMID:22022213 PMID:24269233 PMID:28209804 PMID:10749848 GO_REF:0000024, RGD:14697717, RGD:14697721 NCBI chr16:45,755,246...45,821,541
Ensembl chr16:45,755,254...45,821,541
JBrowse link
G Acsl3 acyl-CoA synthetase long-chain family member 3 involved_in ISO
IDA
ISS
IBA
(PMID:22633490)
PMID:28209804
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:22633490 PMID:28209804 PMID:21873635 GO_REF:0000024, RGD:14697717, RGD:13792537 NCBI chr 9:80,140,996...80,164,636
Ensembl chr 9:80,115,112...80,164,627
JBrowse link
G Acsl4 acyl-CoA synthetase long-chain family member 4 involved_in
acts_upstream_of_or_within
IBA
ISO
IDA
ISS
PMID:21873635
(MGI:5469506|PMID:23159612)
PMID:28209804
GO_REF:0000024
(PMID:22633490), (PMID:24269233)
RGD
UniProt
PMID:22633490 PMID:23159612 PMID:24269233 PMID:21873635 PMID:28209804 GO_REF:0000024 MGI:5469506, RGD:13792537, RGD:14697717 NCBI chr  X:105,942,794...106,006,573
Ensembl chr  X:105,942,799...106,006,427
JBrowse link
G Acsl5 acyl-CoA synthetase long-chain family member 5 involved_in IBA
IDA
IEA
ISO
IMP
PMID:21873635
PMID:28209804
GO_REF:0000108
(PMID:17681178)
(MGI:6355833|PMID:22633490)
(PMID:22633490), (PMID:24269233)
GOC
RGD
PMID:17681178 PMID:22633490 PMID:24269233 PMID:21873635 PMID:28209804 More... GO_REF:0000108 MGI:6355833, RGD:13792537, RGD:14697717, RGD:14697723 NCBI chr 1:254,289,513...254,336,608
Ensembl chr 1:254,292,521...254,336,607
JBrowse link
G Acsl6 acyl-CoA synthetase long-chain family member 6 acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
(MGI:2664065|PMID:12767919)
PMID:28209804
GO_REF:0000108
(PMID:20429931)
(PMID:22633490), (PMID:24269233)
RGD
GOC
PMID:12767919 PMID:20429931 PMID:22633490 PMID:24269233 PMID:1569043 More... GO_REF:0000108 MGI:2664065, RGD:69376, RGD:14697717 NCBI chr10:38,439,914...38,501,182
Ensembl chr10:38,440,080...38,498,757
JBrowse link
G Acsm1 acyl-CoA synthetase medium-chain family member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:173,985,715...174,020,565
Ensembl chr 1:173,984,672...174,025,495
JBrowse link
G Acsm2 acyl-CoA synthetase medium-chain family member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:173,916,368...173,955,116
Ensembl chr 1:173,916,368...173,955,116
JBrowse link
G Cd36 CD36 molecule IMP RGD PMID:15161924 RGD:1598388 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A involved_in TAS
ISO
IDA
IMP
(PMID:11350182)
PMID:21990363
RGD PMID:11350182 PMID:9461513 PMID:21990363 PMID:19302064 RGD:1298568, RGD:8554544, RGD:2311346 NCBI chr 1:200,564,634...200,627,059
Ensembl chr 1:200,565,613...200,627,055
JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:20538056)
UniProt
Ensembl
RGD
PMID:20538056 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:122,664,677...122,682,126
Ensembl chr 5:122,664,677...122,682,095
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 involved_in ISO (PMID:18577768) RGD PMID:18577768 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
JBrowse link
G Cyp2c6v1 cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1 involved_in ISO (PMID:18577768) RGD PMID:18577768 NCBI chr 1:237,938,521...237,976,238
Ensembl chr 1:237,693,094...238,057,596
JBrowse link
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 involved_in ISO (PMID:18577768) RGD PMID:18577768 NCBI chr 1:195,840,330...195,850,728
Ensembl chr 1:195,840,058...195,864,023
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase IDA N-myristoylglycine RGD PMID:8660675 RGD:6483540 NCBI chr 9:97,998,581...98,271,966
Ensembl chr 9:98,122,916...98,271,965
JBrowse link
G Pnpla3 patatin-like phospholipase domain containing 3 involved_in ISO (PMID:22560221)
(MGI:5426312|PMID:22560221)
RGD PMID:22560221 MGI:5426312 NCBI chr 7:115,293,538...115,314,077
Ensembl chr 7:115,293,538...115,314,077
JBrowse link
G Slc27a1 solute carrier family 27 member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:18,278,984...18,300,173
Ensembl chr16:18,278,984...18,296,063
JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IMP
GO_REF:0000107
(MGI:2183868|PMID:12048192)
(PMID:22022213)
PMID:10640429
Ensembl
RGD
PMID:12048192 PMID:22022213 PMID:10640429 GO_REF:0000107 MGI:2183868, RGD:8554430 NCBI chr 3:113,804,728...113,842,208
Ensembl chr 3:113,804,728...113,842,208
JBrowse link
G Slc27a3 solute carrier family 27 member 3 involved_in ISO (PMID:23936004) RGD PMID:23936004 NCBI chr 2:175,853,241...175,857,909
Ensembl chr 2:175,853,241...175,857,909
JBrowse link
G Slc27a4 solute carrier family 27 member 4 involved_in
acts_upstream_of_or_within
ISO (PMID:22022213)
(MGI:2136504|PMID:11404000), (MGI:3576956|PMID:15653672), (MGI:3696309|PMID:17062637)
RGD PMID:11404000 PMID:15653672 PMID:17062637 PMID:22022213 MGI:2136504 MGI:3576956 MGI:3696309 NCBI chr 3:13,075,022...13,087,943
Ensembl chr 3:13,075,022...13,087,943
JBrowse link
G Slc27a5 solute carrier family 27 member 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:73,616,556...73,627,149
Ensembl chr 1:73,616,564...73,627,172
JBrowse link
G Slc27a6 solute carrier family 27 member 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:52,040,241...52,099,622
Ensembl chr18:52,041,074...52,099,414
JBrowse link
arachidonic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISO
IBA
IDA
(PMID:1851637), (PMID:8319693)
(MGI:1202206|PMID:9501222), (MGI:66203|PMID:8188678)
PMID:21873635
PMID:23382512
RGD PMID:1851637 PMID:8188678 PMID:8319693 PMID:9501222 PMID:21873635 More... MGI:1202206 MGI:66203, RGD:13792537, RGD:8554649 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IEA
ISO
IDA
IBA
GO_REF:0000107
(MGI:1313249|PMID:10100631), (MGI:3608217|PMID:16129665), (MGI:6316908|PMID:11256953)
(PMID:15629692)
PMID:23382512
PMID:21873635
Ensembl
RGD
PMID:10100631 PMID:11256953 PMID:15629692 PMID:16129665 PMID:23382512 More... GO_REF:0000107 MGI:1313249 MGI:3608217 MGI:6316908, RGD:8554649, RGD:13792537 NCBI chr10:53,863,060...53,874,938
Ensembl chr10:53,863,060...53,874,938
JBrowse link
G Alox12e arachidonate 12-lipoxygenase, epidermal involved_in IDA
IBA
PMID:23382512
PMID:21873635
UniProt
GO_Central
PMID:23382512 PMID:21873635 RGD:8554649, RGD:13792537 NCBI chr10:55,034,392...55,041,857
Ensembl chr10:55,034,392...55,041,928
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in IDA
ISO
NAS
IBA
(PMID:8305485)
(MGI:1101294|PMID:8798642), (MGI:66203|PMID:8188678)
PMID:15123652
(PMID:17052953), (PMID:1944593), (PMID:24282679), (PMID:8334154)
PMID:23382512
PMID:21873635
RGD PMID:1944593 PMID:8188678 PMID:8305485 PMID:8334154 PMID:8798642 More... MGI:1101294 MGI:66203, RGD:70288, RGD:5509794, RGD:8554649, RGD:13792537 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B involved_in IBA
ISO
IEA
IDA
PMID:21873635
(MGI:1097306|PMID:9305900)
(PMID:10542053), (PMID:10625675), (PMID:24282679), (PMID:24497644), (PMID:27145229), (PMID:9177185)
GO_REF:0000107
PMID:23382512
RGD
Ensembl
PMID:9177185 PMID:9305900 PMID:10542053 PMID:10625675 PMID:24282679 More... GO_REF:0000107 MGI:1097306, RGD:13792537, RGD:8554649 NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 involved_in IDA
ISO
IBA
PMID:23382512
(MGI:3694035|PMID:17045234)
(PMID:12881489), (PMID:17045234)
PMID:21873635
RGD PMID:12881489 PMID:17045234 PMID:23382512 PMID:21873635 MGI:3694035, RGD:8554649, RGD:13792537 NCBI chr10:53,830,219...53,854,328
Ensembl chr10:53,831,264...53,854,328
JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in IEA
ISO
ISS
GO_REF:0000041
(MGI:5572883|PMID:15258110)
GO_REF:0000024
GO_REF:0000107
(PMID:15258110)
UniProt
RGD
Ensembl
PMID:15258110 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 MGI:5572883 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917
JBrowse link
G Cyp2c23 cytochrome P450, family 2, subfamily c, polypeptide 23 NAS RGD PMID:8514789 RGD:727619 NCBI chr 1:242,889,218...242,913,869
Ensembl chr 1:242,889,224...242,913,858
JBrowse link
G Cyp2c24 cytochrome P450, family 2, subfamily c, polypeptide 24 acts_upstream_of_or_within ISO (MGI:3665447|PMID:15102943) RGD PMID:15102943 MGI:3665447 NCBI chr 1:236,873,967...236,936,238
Ensembl chr 1:236,873,967...236,936,238
JBrowse link
G Cyp2c6v1 cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1 involved_in ISO (MGI:1277710|PMID:9721182) RGD PMID:9721182 MGI:1277710 NCBI chr 1:237,938,521...237,976,238
Ensembl chr 1:237,693,094...238,057,596
JBrowse link
G Cyp2c79 cytochrome P450, family 2, subfamily c, polypeptide 79 involved_in ISO (MGI:1277710|PMID:9721182) RGD PMID:9721182 MGI:1277710
G Cyp2d1 cytochrome P450, family 2, subfamily d, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,908,950...113,913,420
Ensembl chr 7:113,908,947...113,922,084
JBrowse link
G Cyp2d2 cytochrome P450, family 2, subfamily d, polypeptide 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,935,138...113,939,209
Ensembl chr 7:113,935,138...113,939,209
JBrowse link
G Cyp2d3 cytochrome P450, family 2, subfamily d, polypeptide 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,917,711...113,922,068
Ensembl chr 7:113,908,947...113,922,084
JBrowse link
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10945868 PMID:21873635 RGD:1599723, RGD:13792537 NCBI chr 7:113,882,584...113,891,754
Ensembl chr 7:113,881,618...113,891,759
JBrowse link
G Cyp2d5 cytochrome P450, family 2, subfamily d, polypeptide 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:113,899,905...113,904,458
Ensembl chr 7:113,899,890...113,904,495
JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 involved_in IDA
IEA
GO_REF:0000041 UniProt
RGD
PMID:9143331 GO_REF:0000041, RGD:632631 NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794
JBrowse link
G Cyp4a1 cytochrome P450, family 4, subfamily a, polypeptide 1 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:12857783 PMID:21873635 RGD:1625451, RGD:13792537 NCBI chr 5:129,123,323...129,137,464
Ensembl chr 5:129,123,336...129,137,464
JBrowse link
G Cyp4a2 cytochrome P450, family 4, subfamily a, polypeptide 2 involved_in TAS
IBA
IMP
PMID:21873635 RGD
GO_Central
PMID:12060587 PMID:21873635 PMID:12857783 RGD:628319, RGD:13792537, RGD:1625451 NCBI chr 5:128,922,355...128,934,188
Ensembl chr 5:128,923,615...128,934,165
JBrowse link
G Cyp4a3 cytochrome P450, family 4, subfamily a, polypeptide 3 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:12857783 PMID:21873635 RGD:1625451, RGD:13792537 NCBI chr 5:129,097,571...129,115,488
Ensembl chr 5:129,097,926...129,115,463
JBrowse link
G Cyp4a8 cytochrome P450, family 4, subfamily a, polypeptide 8 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:15618658 PMID:21873635 RGD:2303409, RGD:13792537 NCBI chr 5:128,702,130...128,733,476
Ensembl chr 5:128,702,131...128,733,476
JBrowse link
G Cyp4f1 cytochrome P450, family 4, subfamily f, polypeptide 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16415532 PMID:21873635 RGD:2301706, RGD:13792537 NCBI chr 7:12,010,850...12,022,497
Ensembl chr 7:12,010,852...12,022,046
JBrowse link
G Cyp4f18 cytochrome P450, family 4, subfamily f, polypeptide 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:17,763,543...17,804,944
Ensembl chr16:17,707,317...17,804,940
JBrowse link
G Cyp4f4 cytochrome P450, family 4, subfamily f, polypeptide 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,717,208...11,733,507
Ensembl chr 7:11,717,208...11,733,506
JBrowse link
G Cyp4f40 cytochrome P450, family 4, subfamily f, polypeptide 40 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,691,648...11,707,437
Ensembl chr 7:11,692,086...11,706,229
JBrowse link
G Dagla diacylglycerol lipase, alpha acts_upstream_of_or_within
involved_in
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:6423248|PMID:17584991)
MGI:4438719 (MGI:4437165|PMID:20147530)
(PMID:14610053)
UniProt
RGD
PMID:14610053 PMID:17584991 PMID:20147530 PMID:21873635 GO_REF:0000024 MGI:4437165 MGI:6423248, RGD:13792537 NCBI chr 1:206,890,635...206,947,332
Ensembl chr 1:206,890,638...206,947,232
JBrowse link
G Daglb diacylglycerol lipase, beta involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
ISS
(PMID:14610053)
PMID:21873635
GO_REF:0000107
(MGI:6414691|PMID:23103940)
MGI:3529581 (MGI:4437165|PMID:20147530)
RGD
Ensembl
PMID:14610053 PMID:20147530 PMID:23103940 PMID:21873635 PMID:23103940 GO_REF:0000107 MGI:4437165 MGI:6414691, RGD:13792537, RGD:25671391 NCBI chr12:11,059,732...11,102,170
Ensembl chr12:11,059,732...11,102,154
JBrowse link
G Ephx1 epoxide hydrolase 1 involved_in ISO
IBA
ISS
(PMID:24958911)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24958911 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr13:92,714,315...92,744,124
Ensembl chr13:92,714,315...92,790,235
JBrowse link
G Fads1 fatty acid desaturase 1 IMP RGD PMID:11414679 RGD:632758 NCBI chr 1:206,827,724...206,842,734
Ensembl chr 1:206,827,765...206,842,734
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:893248|PMID:9195979)
GO_REF:0000024
(PMID:11115402)
Ensembl
RGD
UniProt
PMID:9195979 PMID:11115402 GO_REF:0000024 GO_REF:0000107 MGI:893248 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Gpx4 glutathione peroxidase 4 involved_in ISO
ISS
(PMID:11115402)
GO_REF:0000024
RGD
UniProt
PMID:11115402 GO_REF:0000024 NCBI chr 7:9,650,186...9,652,982
Ensembl chr 7:9,650,185...9,652,982
JBrowse link
G Mapk3 mitogen activated protein kinase 3 IEP RGD PMID:15027896 RGD:1626220 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Mgll monoglyceride lipase involved_in ISS
ISO
GO_REF:0000024
(MGI:4836780|PMID:20729846)
UniProt
RGD
PMID:20729846 GO_REF:0000024 MGI:4836780 NCBI chr 4:121,192,187...121,294,187
Ensembl chr 4:121,192,195...121,294,179
JBrowse link
G Pla2g2f phospholipase A2, group IIF involved_in ISO (MGI:6467677|PMID:11877435) RGD PMID:11877435 MGI:6467677 NCBI chr 5:150,986,788...150,993,175
Ensembl chr 5:150,986,788...150,993,175
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in IMP
ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000041
(PMID:7794891)
UniProt
RGD
PMID:7794891 PMID:16603549 GO_REF:0000024 GO_REF:0000041, RGD:1642459 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Pnpla8 patatin-like phospholipase domain containing 8 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:10833412), (PMID:15695510), (PMID:28442572)
UniProt
RGD
PMID:10833412 PMID:15695510 PMID:28442572 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:61,329,810...61,391,736
Ensembl chr 6:61,329,810...61,391,734
JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:124,510,827...124,514,475
Ensembl chr 6:124,510,870...124,513,747
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 involved_in IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:1380156)
Ensembl
RGD
PMID:1380156 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:19,584,015...19,605,589
Ensembl chr 3:19,584,015...19,605,586
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in
acts_upstream_of_or_within
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:5315361|PMID:12925531)
(MGI:52337|PMID:1419907)
(PMID:1380156), (PMID:7592599), (PMID:7947975)
UniProt
RGD
PMID:1380156 PMID:1419907 PMID:7592599 PMID:7947975 PMID:12925531 More... GO_REF:0000024 MGI:52337 MGI:5315361, RGD:13792537 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO MGI:2182095|MGI:5758867 (MGI:6093414|PMID:28973536) RGD PMID:28973536 MGI:6093414 NCBI chr10:51,744,656...51,757,246
Ensembl chr10:51,744,656...51,757,237
JBrowse link
G Sphk1 sphingosine kinase 1 IDA RGD PMID:18723875 RGD:2311353 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240
JBrowse link
epoxygenase P450 pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2a1 cytochrome P450, family 2, subfamily a, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:82,231,611...82,244,887
Ensembl chr 1:82,231,611...82,244,887
JBrowse link
G Cyp2a2 cytochrome P450, family 2, subfamily a, polypeptide 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:82,263,833...82,289,487
Ensembl chr 1:82,263,833...82,289,487
JBrowse link
G Cyp2a3 cytochrome P450, family 2, subfamily a, polypeptide 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:82,171,914...82,179,980
Ensembl chr 1:82,169,949...82,179,979
JBrowse link
G Cyp2b1 cytochrome P450, family 2, subfamily b, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:81,518,387...81,544,999
Ensembl chr 1:81,518,408...81,542,052
JBrowse link
G Cyp2b12 cytochrome P450, family 2, subfamily b, polypeptide 12 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:9535921 PMID:21873635 RGD:2301469, RGD:13792537 NCBI chr 1:82,007,609...82,019,409
Ensembl chr 1:82,007,609...82,080,480
JBrowse link
G Cyp2b15 cytochrome P450, family 2, subfamily b, polypeptide 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:82,094,188...82,106,492
Ensembl chr 1:82,094,180...82,106,492
JBrowse link
G Cyp2b2 cytochrome P450, family 2, subfamily b, polypeptide 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:81,594,534...81,608,567
Ensembl chr 1:81,594,555...81,608,566
JBrowse link
G Cyp2b21 cytochrome P450, family 2, subfamily b, polypeptide 21 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:81,886,097...81,915,066
Ensembl chr 1:81,886,098...81,915,066
JBrowse link
G Cyp2b3 cytochrome P450, family 2, subfamily b, polypeptide 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:81,652,762...81,732,153
Ensembl chr 1:81,652,787...81,732,143
JBrowse link
G Cyp2c11 cytochrome P450, subfamily 2, polypeptide 11 involved_in IBA
IDA
PMID:21873635
PMID:10491410
GO_Central
UniProt
PMID:21873635 PMID:10491410 RGD:13792537, RGD:39458017 NCBI chr 1:236,762,719...236,799,069
Ensembl chr 1:236,762,842...236,799,066
JBrowse link
G Cyp2c12 cytochrome P450, family 2, subfamily c, polypeptide 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:238,699,859...238,757,011
Ensembl chr 1:238,699,854...238,757,019
JBrowse link
G Cyp2c13 cytochrome P450, family 2, subfamily c, polypeptide 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:238,786,764...238,867,195
Ensembl chr 1:238,786,765...238,867,191
JBrowse link
G Cyp2c22 cytochrome P450, family 2, subfamily c, polypeptide 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:238,991,698...239,031,323
Ensembl chr 1:238,991,610...239,021,738
JBrowse link
G Cyp2c23 cytochrome P450, family 2, subfamily c, polypeptide 23 involved_in IBA
IDA
PMID:21873635
PMID:14742258
PMID:10491410
PMID:8246128
GO_Central
UniProt
PMID:21873635 PMID:14742258 PMID:10491410 PMID:8246128 RGD:13792537, RGD:39458011, RGD:39458017, RGD:39458010 NCBI chr 1:242,889,218...242,913,869
Ensembl chr 1:242,889,224...242,913,858
JBrowse link
G Cyp2c24 cytochrome P450, family 2, subfamily c, polypeptide 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:236,873,967...236,936,238
Ensembl chr 1:236,873,967...236,936,238
JBrowse link
G Cyp2c6_v1-ps2 cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1, pseudogene 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:238,352,261...238,391,716
Ensembl chr 1:238,352,131...238,504,300
JBrowse link
G Cyp2c6v1 cytochrome P450, family 2, subfamily C, polypeptide 6, variant 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:237,938,521...237,976,238
Ensembl chr 1:237,693,094...238,057,596
JBrowse link
G Cyp2c7 cytochrome P450, family 2, subfamily c, polypeptide 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:237,332,641...237,388,714
Ensembl chr 1:237,332,659...237,388,709
JBrowse link
G Cyp2c79 cytochrome P450, family 2, subfamily c, polypeptide 79 involved_in ISO (PMID:7574697) RGD PMID:7574697
G Cyp2c80 cytochrome P450, family 2, subfamily c, polypeptide 80 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:195,840,330...195,850,728
Ensembl chr 1:195,840,058...195,864,023
JBrowse link
G Cyp2f4 cytochrome P450, family 2, subfamily f, polypeptide 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:82,416,108...82,429,897
Ensembl chr 1:82,416,130...82,429,896
JBrowse link
G Cyp2g1 cytochrome P450, family 2, subfamily g, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:82,145,635...82,156,862
Ensembl chr 1:82,145,073...82,156,828
JBrowse link
G Cyp2j3 cytochrome P450, family 2, subfamily j, polypeptide 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:111,219,921...111,244,987
Ensembl chr 5:111,178,703...111,244,794
JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 involved_in ISO (PMID:11901223), (PMID:8631948) RGD PMID:8631948 PMID:11901223 NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794
JBrowse link
G Cyp2s1 cytochrome P450, family 2, subfamily s, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:81,309,948...81,325,303
Ensembl chr 1:81,310,451...81,325,303
JBrowse link
G Cyp2t1 cytochrome P450, family 2, subfamily t, polypeptide 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:82,446,321...82,451,564
Ensembl chr 1:82,446,921...82,451,563
JBrowse link
G LOC100361492 cytochrome P450, family 2, subfamily c, polypeptide 55-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:237,009,434...237,054,495
Ensembl chr 1:237,009,368...237,054,564
JBrowse link
G LOC103691072 cytochrome P450 2B15-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:82,067,160...82,079,597
Ensembl chr 1:82,067,121...82,107,370
JBrowse link
G LOC103691092 cytochrome P450 2B9-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:81,791,776...81,810,482
Ensembl chr 1:81,784,649...81,810,482
JBrowse link
hepoxilin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in IDA
IBA
PMID:23382512
PMID:21873635
UniProt
GO_Central
PMID:23382512 PMID:21873635 RGD:8554649, RGD:13792537 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IDA
IBA
PMID:23382512
PMID:21873635
UniProt
GO_Central
PMID:23382512 PMID:21873635 RGD:8554649, RGD:13792537 NCBI chr10:53,863,060...53,874,938
Ensembl chr10:53,863,060...53,874,938
JBrowse link
G Alox12e arachidonate 12-lipoxygenase, epidermal involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:55,034,392...55,041,857
Ensembl chr10:55,034,392...55,041,928
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in IDA
IBA
PMID:21873635
PMID:23382512
RGD
GO_Central
UniProt
PMID:15123652 PMID:21873635 PMID:23382512 RGD:5509794, RGD:13792537, RGD:8554649 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B involved_in IDA
IBA
PMID:23382512
PMID:21873635
UniProt
GO_Central
PMID:23382512 PMID:21873635 RGD:8554649, RGD:13792537 NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 involved_in ISO
IDA
IBA
(PMID:12881489), (PMID:17045234)
(MGI:3694035|PMID:17045234), (MGI:5488571|PMID:22832496)
PMID:23382512
PMID:21873635
RGD PMID:12881489 PMID:17045234 PMID:22832496 PMID:23382512 PMID:21873635 MGI:3694035 MGI:5488571, RGD:8554649, RGD:13792537 NCBI chr10:53,830,219...53,854,328
Ensembl chr10:53,831,264...53,854,328
JBrowse link
G Gstm1 glutathione S-transferase mu 1 involved_in ISO
ISS
(PMID:21046276)
GO_REF:0000024
RGD
UniProt
PMID:21046276 GO_REF:0000024 NCBI chr 2:195,649,845...195,655,402
Ensembl chr 2:195,649,845...195,655,411
JBrowse link
G Gstm2 glutathione S-transferase mu 2 involved_in ISO
ISS
(PMID:21046276)
GO_REF:0000024
RGD
UniProt
PMID:21046276 GO_REF:0000024 NCBI chr 2:195,624,015...195,628,774
Ensembl chr 2:195,544,426...195,628,961
JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO
ISS
(PMID:21046276)
GO_REF:0000024
RGD
UniProt
PMID:21046276 GO_REF:0000024 NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226
JBrowse link
linoleic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in
NOT|involved_in
IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:8319693)
(PMID:1851637)
UniProt
RGD
PMID:1851637 PMID:8319693 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in IBA
ISO
ISS
IEA
PMID:21873635
(MGI:3608217|PMID:16129665)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:16129665 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3608217, RGD:13792537 NCBI chr10:53,863,060...53,874,938
Ensembl chr10:53,863,060...53,874,938
JBrowse link
G Alox12e arachidonate 12-lipoxygenase, epidermal involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:55,034,392...55,041,857
Ensembl chr10:55,034,392...55,041,928
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in ISO
ISS
IBA
(PMID:8334154)
(PMID:8305485)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:8305485 PMID:8334154 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Alox15b arachidonate 15-lipoxygenase, type B involved_in IBA
ISO
IEA
PMID:21873635
(MGI:1097306|PMID:9305900)
GO_REF:0000107
RGD
Ensembl
PMID:9305900 PMID:21873635 GO_REF:0000107 MGI:1097306, RGD:13792537 NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:3694035|PMID:17045234)
GO_REF:0000024
(PMID:12881489), (PMID:17045234)
RGD
UniProt
PMID:12881489 PMID:17045234 PMID:21873635 GO_REF:0000024 MGI:3694035, RGD:13792537 NCBI chr10:53,830,219...53,854,328
Ensembl chr10:53,831,264...53,854,328
JBrowse link
G Cyp2c24 cytochrome P450, family 2, subfamily c, polypeptide 24 acts_upstream_of_or_within ISO (MGI:3665447|PMID:15102943) RGD PMID:15102943 MGI:3665447 NCBI chr 1:236,873,967...236,936,238
Ensembl chr 1:236,873,967...236,936,238
JBrowse link
G Cyp2j3 cytochrome P450, family 2, subfamily j, polypeptide 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 5:111,219,921...111,244,987
Ensembl chr 5:111,178,703...111,244,794
JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 involved_in ISO (PMID:11901223) RGD PMID:11901223 NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794
JBrowse link
G Cyp4a1 cytochrome P450, family 4, subfamily a, polypeptide 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10362749 PMID:21873635 RGD:2303410, RGD:13792537 NCBI chr 5:129,123,323...129,137,464
Ensembl chr 5:129,123,336...129,137,464
JBrowse link
G Cyp4a2 cytochrome P450, family 4, subfamily a, polypeptide 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10362749 PMID:21873635 RGD:2303410, RGD:13792537 NCBI chr 5:128,922,355...128,934,188
Ensembl chr 5:128,923,615...128,934,165
JBrowse link
G Cyp4a3 cytochrome P450, family 4, subfamily a, polypeptide 3 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10362749 PMID:21873635 RGD:2303410, RGD:13792537 NCBI chr 5:129,097,571...129,115,488
Ensembl chr 5:129,097,926...129,115,463
JBrowse link
G Cyp4a8 cytochrome P450, family 4, subfamily a, polypeptide 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:128,702,130...128,733,476
Ensembl chr 5:128,702,131...128,733,476
JBrowse link
G Ephx2 epoxide hydrolase 2 IMP RGD PMID:16962614 RGD:5688387 NCBI chr15:40,289,901...40,327,632
Ensembl chr15:40,289,902...40,327,615
JBrowse link
G Gsta1 glutathione S-transferase alpha 1 involved_in ISO (PMID:16624487) RGD PMID:16624487 NCBI chr 9:23,703,476...23,720,121
Ensembl chr 9:23,703,477...23,720,121
JBrowse link
G Gstm2 glutathione S-transferase mu 2 involved_in ISO (PMID:16624487) RGD PMID:16624487 NCBI chr 2:195,624,015...195,628,774
Ensembl chr 2:195,544,426...195,628,961
JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO (PMID:16624487) RGD PMID:16624487 NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226
JBrowse link
G Pnpla8 patatin-like phospholipase domain containing 8 involved_in ISO (PMID:15695510) RGD PMID:15695510 NCBI chr 6:61,329,810...61,391,736
Ensembl chr 6:61,329,810...61,391,734
JBrowse link
long-chain fatty acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsbg1 acyl-CoA synthetase bubblegum family member 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11381125 PMID:21873635 RGD:68727, RGD:13792537 NCBI chr 8:54,991,294...55,047,276
Ensembl chr 8:54,991,296...55,047,391
JBrowse link
G Acsbg2 acyl-CoA synthetase bubblegum family member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:1,683,846...1,715,517
Ensembl chr 9:1,683,847...1,714,518
JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:229,865,662...229,973,253
Ensembl chr 1:229,865,662...229,939,162
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in ISO
ISS
(PMID:20937905)
GO_REF:0000024
RGD
UniProt
PMID:20937905 GO_REF:0000024 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Fads1 fatty acid desaturase 1 acts_upstream_of_or_within ISO (PMID:10601301) RGD PMID:10601301 NCBI chr 1:206,827,724...206,842,734
Ensembl chr 1:206,827,765...206,842,734
JBrowse link
G Gstm4 glutathione S-transferase mu 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:27791009)
UniProt
RGD
PMID:27791009 GO_REF:0000024 NCBI chr 2:195,667,940...195,685,315
Ensembl chr 2:195,680,004...195,685,323
JBrowse link
G LOC316124 similar to gonadotropin-regulated long chain acyl-CoA synthetase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:1,699,337...1,727,637
Ensembl chr 9:1,704,674...1,727,634
JBrowse link
G Ltc4s leukotriene C4 synthase involved_in ISO
ISS
(PMID:27791009)
GO_REF:0000024
RGD
UniProt
PMID:27791009 GO_REF:0000024 NCBI chr10:34,560,476...34,562,790
Ensembl chr10:34,560,360...34,562,651
JBrowse link
G Myo5a myosin VA acts_upstream_of_or_within ISO MGI:1856005 (MGI:3619818|PMID:1150661) RGD PMID:1150661 MGI:3619818 NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918
JBrowse link
G Plp1 proteolipid protein 1 acts_upstream_of_or_within ISO MGI:1856065 (MGI:3619818|PMID:1150661) RGD PMID:1150661 MGI:3619818 NCBI chr  X:100,184,039...100,201,035
Ensembl chr  X:100,185,767...100,201,032
JBrowse link
G Qki QKI, KH domain containing RNA binding acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1856539 (MGI:3619818|PMID:1150661)
GO_REF:0000107
RGD
Ensembl
PMID:1150661 GO_REF:0000107 MGI:3619818 NCBI chr 1:50,387,698...50,501,568
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO
ISS
UniProtKB:P34230 (PMID:18757502), (PMID:23671276)
GO_REF:0000024
RGD
UniProt
PMID:18757502 PMID:23671276 GO_REF:0000024 NCBI chr  X:151,428,334...151,450,115
Ensembl chr  X:151,428,578...151,450,115
JBrowse link
G Acadl acyl-CoA dehydrogenase, long chain involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:3968063 PMID:21873635 RGD:2317678, RGD:13792537 NCBI chr 9:68,333,981...68,372,149
Ensembl chr 9:68,333,980...68,372,220
JBrowse link
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO (PMID:27018888) RGD PMID:27018888 NCBI chr17:22,930,012...22,993,834
Ensembl chr17:22,930,740...22,993,826
JBrowse link
G Aig1 androgen-induced 1 involved_in ISO (PMID:27018888) RGD PMID:27018888 NCBI chr 1:8,046,430...8,269,276
Ensembl chr 1:8,046,430...8,269,084
JBrowse link
G Lipe lipase E, hormone sensitive type acts_upstream_of_or_within ISO (MGI:3654969|PMID:16804080) RGD PMID:16804080 MGI:3654969 NCBI chr 1:80,965,612...80,984,313
Ensembl chr 1:80,965,627...80,984,310
JBrowse link
omega-hydroxylase P450 pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2u1 cytochrome P450, family 2, subfamily u, polypeptide 1 involved_in ISO (PMID:24563460) RGD PMID:24563460 NCBI chr 2:219,849,403...219,866,959
Ensembl chr 2:219,849,407...219,866,882
JBrowse link
G Cyp4a1 cytochrome P450, family 4, subfamily a, polypeptide 1 NOT|involved_in ISO (PMID:10860550) RGD PMID:10860550 NCBI chr 5:129,123,323...129,137,464
Ensembl chr 5:129,123,336...129,137,464
JBrowse link
G Cyp4f1 cytochrome P450, family 4, subfamily f, polypeptide 1 involved_in IDA PMID:14634044 UniProt PMID:14634044 RGD:2301710 NCBI chr 7:12,010,850...12,022,497
Ensembl chr 7:12,010,852...12,022,046
JBrowse link
G Cyp4f18 cytochrome P450, family 4, subfamily f, polypeptide 18 involved_in ISO (PMID:18577768)
(PMID:15364545)
(PMID:15364545), (PMID:18577768)
RGD PMID:15364545 PMID:18577768 NCBI chr16:17,763,543...17,804,944
Ensembl chr16:17,707,317...17,804,940
JBrowse link
G Cyp4f4 cytochrome P450, family 4, subfamily f, polypeptide 4 involved_in IDA PMID:14634044 UniProt PMID:14634044 RGD:2301710 NCBI chr 7:11,717,208...11,733,507
Ensembl chr 7:11,717,208...11,733,506
JBrowse link
G Cyp4f40 cytochrome P450, family 4, subfamily f, polypeptide 40 involved_in ISO (PMID:15364545) RGD PMID:15364545 NCBI chr 7:11,691,648...11,707,437
Ensembl chr 7:11,692,086...11,706,229
JBrowse link
palmitic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in IBA
ISO
PMID:21873635
(PMID:10578051)
RGD PMID:10578051 PMID:21873635 RGD:13792537 NCBI chr 5:162,686,562...162,779,309
Ensembl chr 5:162,684,645...162,779,309
JBrowse link
phytanic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO
ISS
(MGI:5613029|PMID:25168382)
GO_REF:0000024
RGD
UniProt
PMID:25168382 GO_REF:0000024 MGI:5613029 NCBI chr 2:209,852,087...209,905,763
Ensembl chr 2:209,852,087...209,906,020
JBrowse link
G Hacl1 2-hydroxyacyl-CoA lyase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:28289220)
UniProt
RGD
PMID:28289220 GO_REF:0000024 NCBI chr16:6,826,881...6,863,027
Ensembl chr16:6,824,906...6,863,027
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18877
    metabolic process 11591
      cellular metabolic process 9831
        cellular lipid metabolic process 1051
          fatty acid metabolic process 443
            long-chain fatty acid metabolic process 117
              alpha-linolenic acid metabolic process 0
              arachidonic acid metabolic process + 69
              hepoxilin metabolic process + 10
              linoleic acid metabolic process 19
              long-chain fatty acid biosynthetic process + 22
              long-chain fatty acid catabolic process + 5
              palmitic acid metabolic process + 1
              phytanic acid metabolic process 2
Path 2
Term Annotations click to browse term
  biological_process 18877
    metabolic process 11591
      cellular metabolic process 9831
        organic acid metabolic process 1001
          oxoacid metabolic process 987
            carboxylic acid metabolic process 972
              monocarboxylic acid metabolic process 675
                fatty acid metabolic process 443
                  long-chain fatty acid metabolic process 117
                    alpha-linolenic acid metabolic process 0
                    arachidonic acid metabolic process + 69
                    hepoxilin metabolic process + 10
                    linoleic acid metabolic process 19
                    long-chain fatty acid biosynthetic process + 22
                    long-chain fatty acid catabolic process + 5
                    palmitic acid metabolic process + 1
                    phytanic acid metabolic process 2
paths to the root