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ONTOLOGY REPORT - ANNOTATIONS


Term:ureteric bud development
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Accession:GO:0001657 term browser browse the term
Definition:The process whose specific outcome is the progression of the ureteric bud over time, from its formation to the mature structure.



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ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG2 arginase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:41,588,051...41,619,406
Ensembl chr 8:41,588,150...41,619,402
JBrowse link
G B9D2 B9 domain containing 2 involved_in ISO (MGI:3525982|PMID:14656760) UniProt PMID:14656760 MGI:3525982 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:81253|PMID:8623928) MGI
Ensembl
PMID:8623928 GO_REF:0000107 MGI:81253 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G BDNF brain derived neurotrophic factor acts_upstream_of_or_within ISO (MGI:3588889|PMID:16018995) MGI PMID:16018995 MGI:3588889 NCBI chr21:48,191,580...48,243,699
Ensembl chr21:48,192,670...48,204,480
JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2655937|PMID:12631064)
(PMID:12141440)
MGI
Ensembl
PMID:12141440 PMID:12631064 GO_REF:0000107 MGI:2655937 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653
JBrowse link
G BMPER BMP binding endothelial regulator involved_in ISO (MGI:3655805|PMID:16545622) UniProt PMID:16545622 MGI:3655805 NCBI chr14:45,910,634...46,154,922
Ensembl chr14:45,910,739...46,153,501
JBrowse link
G CAT catalase ISO RGD PMID:22733796 RGD:7206853 NCBI chr18:33,383,005...33,422,447
Ensembl chr18:33,383,005...33,422,447
JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:35,155,568...35,159,085
Ensembl chr11:35,156,430...35,158,942
JBrowse link
G CRLF1 cytokine receptor like factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,466,812...44,476,055
Ensembl chr20:44,466,810...44,472,637
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709697|PMID:17435047) MGI
Ensembl
PMID:17435047 GO_REF:0000107 MGI:3709697 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547
JBrowse link
G EPCAM epithelial cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:49,446,165...49,498,690
Ensembl chr10:49,485,746...49,498,475
JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588889|PMID:16018995) MGI
Ensembl
PMID:16018995 GO_REF:0000107 MGI:3588889 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3620275|PMID:16442091) MGI
Ensembl
PMID:16442091 GO_REF:0000107 MGI:3620275 NCBI chr16:27,029,902...27,080,514
Ensembl chr16:27,031,588...27,078,261
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:3620275|PMID:16442091) MGI
UniProt
PMID:16442091 GO_REF:0000024 MGI:3620275 NCBI chr28:31,303,882...31,411,015
Ensembl chr28:31,303,894...31,411,621
JBrowse link
G FOXC1 forkhead box C1 acts_upstream_of_or_within ISO (MGI:1353950|PMID:10704385) MGI PMID:10704385 MGI:1353950
G FOXC2 forkhead box C2 acts_upstream_of_or_within ISO (MGI:1353950|PMID:10704385) MGI PMID:10704385 MGI:1353950 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693
JBrowse link
G FOXC2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107
G GDF11 growth differentiation factor 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2661314|PMID:12729564) MGI
Ensembl
PMID:12729564 GO_REF:0000107 MGI:2661314 NCBI chr10:142,039...152,537
Ensembl chr10:145,036...148,373
JBrowse link
G GDNF glial cell derived neurotrophic factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3582141|PMID:15905075)
(MGI:3530708|PMID:15691764)
MGI
Ensembl
PMID:15691764 PMID:15905075 GO_REF:0000107 MGI:3530708 MGI:3582141 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G LHX1 LIM homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3580024|PMID:15930111) MGI
Ensembl
PMID:15930111 GO_REF:0000107 MGI:3580024 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G LOC474938 glutathione S-transferase A2 involved_in ISO (MGI:3655805|PMID:16545622) UniProt PMID:16545622 MGI:3655805 NCBI chr12:20,349,133...20,365,023 JBrowse link
G NOG noggin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2446986|PMID:12141440) MGI
Ensembl
PMID:12141440 GO_REF:0000107 MGI:2446986 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NPNT nephronectin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714574|PMID:17537792) MGI
Ensembl
PMID:17537792 GO_REF:0000107 MGI:3714574 NCBI chr32:26,706,147...26,781,792
Ensembl chr32:26,705,476...26,781,275
JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228
JBrowse link
G PAX2 paired box 2 acts_upstream_of_or_within ISO (MGI:3588889|PMID:16018995) MGI PMID:16018995 MGI:3588889 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G RARA retinoic acid receptor alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2385976|PMID:12195422) MGI
Ensembl
PMID:12195422 GO_REF:0000107 MGI:2385976 NCBI chr 9:22,254,803...22,298,614
Ensembl chr 9:22,254,806...22,289,459
JBrowse link
G RARB retinoic acid receptor beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2385976|PMID:12195422) MGI
Ensembl
PMID:12195422 GO_REF:0000107 MGI:2385976 NCBI chr23:18,207,253...18,931,128
Ensembl chr23:18,207,760...18,482,652
JBrowse link
G RET ret proto-oncogene acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2385976|PMID:12195422) MGI
Ensembl
PMID:12195422 GO_REF:0000107 MGI:2385976 NCBI chr28:3,946,132...3,995,505
Ensembl chr28:3,947,232...3,994,210
JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISO (MGI:3043010|PMID:15130495)
(PMID:17357069)
UniProt PMID:15130495 PMID:17357069 MGI:3043010 NCBI chr31:9,415,390...11,047,710
Ensembl chr31:9,419,026...11,022,392
JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:2149437|PMID:11688560) MGI PMID:11688560 MGI:2149437 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
G SDC1 syndecan 1 ISO RGD PMID:15282150 RGD:1643132 NCBI chr17:15,220,906...15,243,974
Ensembl chr17:15,222,094...15,243,890
JBrowse link
G SDC4 syndecan 4 ISO RGD PMID:15282150 RGD:1643132 NCBI chr24:32,628,704...32,648,809
Ensembl chr24:32,630,437...32,649,114
JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SIM1 SIM bHLH transcription factor 1 involved_in ISO (MGI:3655805|PMID:16545622) UniProt PMID:16545622 MGI:3655805 NCBI chr12:58,480,744...58,552,126
Ensembl chr12:58,485,823...58,553,192
JBrowse link
G SIX1 SIX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
ISS
IEA
(MGI:2662002|PMID:12783782)
(MGI:3588889|PMID:16018995)
MGI
UniProt
Ensembl
PMID:12783782 PMID:16018995 GO_REF:0000024 GO_REF:0000107 MGI:2662002 MGI:3588889 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955
JBrowse link
G SMAD1 SMAD family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:44,093,491...44,171,177
Ensembl chr15:44,095,497...44,170,098
JBrowse link
G SMAD2 SMAD family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:43,696,883...43,778,063
Ensembl chr 7:43,700,445...43,769,983
JBrowse link
G SMAD3 SMAD family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337
JBrowse link
G SMAD5 SMAD family member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:24,027,603...24,082,673
Ensembl chr11:24,028,126...24,078,169
JBrowse link
G SMAD6 SMAD family member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:30,938,908...31,014,259
Ensembl chr30:30,937,849...31,014,583
JBrowse link
G SMAD7 SMAD family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:79,706,485...79,734,673
Ensembl chr 7:79,706,705...79,734,749
JBrowse link
G SMAD9 SMAD family member 9 involved_in ISO (MGI:3525982|PMID:14656760) UniProt PMID:14656760 MGI:3525982 NCBI chr25:3,768,851...3,844,645
Ensembl chr25:3,779,197...3,841,321
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 acts_upstream_of_or_within ISO (MGI:3530708|PMID:15691764) MGI PMID:15691764 MGI:3530708 NCBI chr19:16,969,869...16,976,573
Ensembl chr19:16,970,904...16,972,089
JBrowse link
G TCF21 transcription factor 21 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1347485|PMID:10572052) MGI
Ensembl
PMID:10572052 GO_REF:0000107 MGI:1347485 NCBI chr 1:26,856,281...26,859,654
Ensembl chr 1:26,856,587...26,859,647
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G TSHZ3 teashirt zinc finger homeobox 3 acts_upstream_of_or_within ISO (MGI:3806378|PMID:18776146) MGI PMID:18776146 MGI:3806378 NCBI chr 1:120,388,125...120,471,185
Ensembl chr 1:120,388,107...120,456,185
JBrowse link
G VCAN versican involved_in ISO (MGI:3655805|PMID:16545622) UniProt PMID:16545622 MGI:3655805 NCBI chr 3:24,127,293...24,238,859
Ensembl chr 3:24,119,181...24,239,192
JBrowse link
G WT1 WT1 transcription factor involved_in ISO (MGI:1335967|PMID:10322633) UniProt PMID:10322633 MGI:1335967 NCBI chr18:35,099,660...35,148,767
Ensembl chr18:35,103,934...35,148,000
JBrowse link
branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF1 fibroblast growth factor 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:37,467,431...37,554,770
Ensembl chr 2:37,470,985...37,554,619
JBrowse link
branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif 16 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5504318|PMID:23661704) MGI
Ensembl
PMID:23661704 GO_REF:0000107 MGI:5504318 NCBI chr34:8,196,733...8,346,215
Ensembl chr34:8,196,716...8,346,309
JBrowse link
G AGT angiotensinogen acts_upstream_of_or_within
NOT|acts_upstream_of_or_within
ISO (MGI:2655949|PMID:12657564)
(MGI:77583|PMID:8675666)
MGI PMID:8675666 PMID:12657564 MGI:2655949 MGI:77583 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3036971|PMID:14699151)
(MGI:3768986|PMID:16672320)
MGI
Ensembl
PMID:14699151 PMID:16672320 GO_REF:0000107 MGI:3036971 MGI:3768986 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G BMP2 bone morphogenetic protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583399|PMID:15925496) MGI
Ensembl
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217
JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714585|PMID:17522159) MGI
Ensembl
PMID:17522159 GO_REF:0000107 MGI:3714585 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G CD44 CD44 molecule acts_upstream_of_or_within ISO (MGI:2449954|PMID:10926769) MGI PMID:10926769 MGI:2449954 NCBI chr18:32,735,493...32,826,483
Ensembl chr18:32,737,907...32,827,107
JBrowse link
G CITED1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in
NOT|involved_in
ISO PMID:15843474
(MGI:3717986|PMID:17615577)
UniProt PMID:15843474 PMID:17615577 MGI:3717986 RGD:8554075 NCBI chr  X:56,327,104...56,332,608
Ensembl chr  X:56,327,182...56,332,047
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 NOT|involved_in ISO (MGI:3717986|PMID:17615577) UniProt PMID:17615577 MGI:3717986 NCBI chr 1:31,522,911...31,525,342
Ensembl chr 1:31,523,799...31,524,995
JBrowse link
G CTNNB1 catenin beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714576|PMID:17537789) MGI
Ensembl
PMID:17537789 GO_REF:0000107 MGI:3714576 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G DCHS1 dachsous cadherin-related 1 acts_upstream_of_or_within ISO (MGI:4939936|PMID:21303848) MGI PMID:21303848 MGI:4939936 NCBI chr21:29,927,713...29,955,742
Ensembl chr21:29,928,176...29,948,713
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709697|PMID:17435047)
(MGI:3688770|PMID:16105026)
(MGI:3699022|PMID:17172448)
MGI
Ensembl
PMID:16105026 PMID:17172448 PMID:17435047 GO_REF:0000107 MGI:3688770 MGI:3699022 MGI:3709697 NCBI chr33:30,016,323...30,253,180
Ensembl chr33:30,016,600...30,253,547
JBrowse link
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3686561|PMID:16937369) MGI PMID:16937369 MGI:3686561 NCBI chr32:11,017,440...11,022,780 JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2662002|PMID:12783782) MGI
Ensembl
PMID:12783782 GO_REF:0000107 MGI:2662002 NCBI chr29:20,176,306...20,595,131
Ensembl chr29:20,177,014...20,525,653
JBrowse link
G FAT4 FAT atypical cadherin 4 acts_upstream_of_or_within ISO (MGI:4939936|PMID:21303848) MGI PMID:21303848 MGI:4939936 NCBI chr19:15,157,595...15,332,821
Ensembl chr19:15,158,922...15,332,045
JBrowse link
G FGF2 fibroblast growth factor 2 involved_in ISO (PMID:12631064) UniProt PMID:12631064 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151
JBrowse link
G FGF8 fibroblast growth factor 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3603080|PMID:16049111) MGI
Ensembl
PMID:16049111 GO_REF:0000107 MGI:3603080 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G FOXD1 forkhead box D1 acts_upstream_of_or_within ISO (MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:2675756
G GDNF glial cell derived neurotrophic factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2675756|PMID:13678594), (MGI:4949995|PMID:21281623) MGI
Ensembl
PMID:13678594 PMID:21281623 GO_REF:0000107 MGI:2675756 MGI:4949995 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611729|PMID:16396903) MGI
Ensembl
PMID:16396903 GO_REF:0000107 MGI:3611729 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132
JBrowse link
G GPC3 glypican 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583399|PMID:15925496) MGI
Ensembl
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr  X:104,313,426...104,751,215
Ensembl chr  X:104,313,591...104,751,756
JBrowse link
G GREB1L GREB1 like retinoic acid receptor coactivator acts_upstream_of_or_within ISO (MGI:6094060|PMID:29100091) MGI PMID:29100091 MGI:6094060 NCBI chr 7:66,489,124...66,758,207
Ensembl chr 7:66,503,999...66,639,013
JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2683817|PMID:14522971) MGI
Ensembl
PMID:14522971 GO_REF:0000107 MGI:2683817 NCBI chr24:260,139...268,861
Ensembl chr24:261,904...299,287
JBrowse link
G HOXA11 homeobox A11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2135652|PMID:11493536) MGI
Ensembl
PMID:11493536 GO_REF:0000107 MGI:2135652 NCBI chr14:40,355,907...40,360,120
Ensembl chr14:40,357,478...40,359,919
JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (MGI:2135652|PMID:11493536) MGI PMID:11493536 MGI:2135652 NCBI chr36:19,913,064...19,926,868
Ensembl chr36:19,914,431...19,916,766
JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:37,400,144...37,494,154
Ensembl chr 5:37,400,279...37,494,089
JBrowse link
G ILK integrin linked kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3575981|PMID:15831470) MGI
Ensembl
PMID:15831470 GO_REF:0000107 MGI:3575981 NCBI chr21:29,911,326...29,917,972
Ensembl chr21:29,911,364...29,917,974
JBrowse link
G LAMA5 laminin subunit alpha 5 acts_upstream_of_or_within ISO (MGI:2678847|PMID:14568553) MGI PMID:14568553 MGI:2678847 NCBI chr24:46,315,008...46,351,279 JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G LOC479600 beta-catenin-interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:62,937,154...63,093,083
Ensembl chr 5:62,938,511...63,093,275
JBrowse link
G LOC489516 heparan sulfate glucosamine 3-O-sulfotransferase 3B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:38,023,858...38,066,548
Ensembl chr 5:38,023,684...38,065,487
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISO (MGI:3830398|PMID:19161241) UniProt PMID:19161241 MGI:3830398 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G NPNT nephronectin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714574|PMID:17537792) MGI
Ensembl
PMID:17537792 GO_REF:0000107 MGI:3714574 NCBI chr32:26,706,147...26,781,792
Ensembl chr32:26,705,476...26,781,275
JBrowse link
G PAX2 paired box 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3768986|PMID:16672320) MGI
Ensembl
PMID:16672320 GO_REF:0000107 MGI:3768986 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PAX8 paired box 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178
JBrowse link
G PBX1 PBX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2451200|PMID:12591246) MGI
Ensembl
PMID:12591246 GO_REF:0000107 MGI:2451200 NCBI chr38:18,378,997...18,703,694
Ensembl chr38:18,418,093...18,703,497
JBrowse link
G PGF placental growth factor acts_upstream_of_or_within ISO (MGI:2675756|PMID:13678594) MGI PMID:13678594 MGI:2675756 NCBI chr 8:48,059,554...48,110,534
Ensembl chr 8:48,059,552...48,075,170
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438
JBrowse link
G PSPN persephin acts_upstream_of_or_within ISO (MGI:1196665|PMID:9491986) MGI PMID:9491986 MGI:1196665 NCBI chr20:53,780,895...53,783,876
Ensembl chr20:53,783,171...53,783,696
JBrowse link
G PTCH1 patched 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4367286|PMID:19809516) MGI
Ensembl
PMID:19809516 GO_REF:0000107 MGI:4367286 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662
JBrowse link
G SALL1 spalt like transcription factor 1 involved_in
acts_upstream_of
ISO (MGI:2447943|PMID:12482961)
(MGI:5563280|PMID:24550112)
UniProt
MGI
PMID:12482961 PMID:24550112 MGI:2447943 MGI:5563280 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611729|PMID:16396903) MGI
Ensembl
PMID:16396903 GO_REF:0000107 MGI:3611729 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SIX1 SIX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2662002|PMID:12783782) MGI
Ensembl
PMID:12783782 GO_REF:0000107 MGI:2662002 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SMAD4 SMAD family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583399|PMID:15925496) MGI
Ensembl
PMID:15925496 GO_REF:0000107 MGI:3583399 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G TCF21 transcription factor 21 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1202620|PMID:9507058)
(MGI:1347485|PMID:10572052)
MGI
Ensembl
PMID:9507058 PMID:10572052 GO_REF:0000107 MGI:1202620 MGI:1347485 NCBI chr 1:26,856,281...26,859,654
Ensembl chr 1:26,856,587...26,859,647
JBrowse link
G TIMELESS timeless circadian regulator acts_upstream_of_or_within ISO PMID:10963667 RGD
MGI
PMID:10963667 RGD:2308864 NCBI chr10:671,829...701,152
Ensembl chr10:671,269...687,016
JBrowse link
G TMEM59L transmembrane protein 59 like involved_in ISO (MGI:6432531|PMID:32017326) MGI PMID:32017326 MGI:6432531 NCBI chr20:44,450,164...44,455,983
Ensembl chr20:44,450,349...44,455,933
JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588895|PMID:16054034) MGI
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588895|PMID:16054034) MGI
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111
JBrowse link
G WNT6 Wnt family member 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2178881|PMID:11948913) MGI
Ensembl
PMID:11948913 GO_REF:0000107 MGI:2178881 NCBI chr37:25,452,875...25,457,437
Ensembl chr37:25,453,905...25,456,654
JBrowse link
G WNT9B Wnt family member 9B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3588895|PMID:16054034) MGI
Ensembl
PMID:16054034 GO_REF:0000107 MGI:3588895 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
G WT1 WT1 transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:35,099,660...35,148,767
Ensembl chr18:35,103,934...35,148,000
JBrowse link
dichotomous subdivision of terminal units involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXD1 forkhead box D1 involved_in ISO (MGI:3525902|PMID:15634693) UniProt PMID:15634693 MGI:3525902
mesenchymal cell proliferation involved in ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217
JBrowse link
G GPC3 glypican 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:104,313,426...104,751,215
Ensembl chr  X:104,313,591...104,751,756
JBrowse link
metanephric part of ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CALB1 calbindin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:35,551,836...35,572,985
Ensembl chr29:35,552,436...35,572,925
JBrowse link
G FOXJ1 forkhead box J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,512,898...4,517,764
Ensembl chr 9:4,513,628...4,517,756
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISO PMID:9496787 UniProt PMID:9496787 RGD:8553921 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G PKD2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:11,383,441...11,437,603
Ensembl chr32:11,383,424...11,435,438
JBrowse link
negative regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4949995|PMID:21281623) MGI
Ensembl
PMID:21281623 GO_REF:0000107 MGI:4949995 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in ISO (MGI:5315060|PMID:22194864) UniProt PMID:22194864 MGI:5315060 NCBI chr 5:51,122,469...51,123,753 JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760
JBrowse link
negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760
JBrowse link
positive regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880
JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr23:43,569,658...43,617,113
Ensembl chr23:43,614,035...43,616,238
JBrowse link
G AGTR2 angiotensin II receptor type 2 involved_in ISO PMID:17537984
(MGI:3808848|PMID:18607644)
UniProt PMID:17537984 PMID:18607644 MGI:3808848 RGD:1643596 NCBI chr  X:88,703,551...88,708,451
Ensembl chr  X:88,705,765...88,706,853
JBrowse link
G B9D2 B9 domain containing 2 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in ISO PMID:17537984 UniProt PMID:17537984 RGD:1643596 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4949995|PMID:21281623)
(MGI:3714585|PMID:17522159)
MGI
Ensembl
PMID:17522159 PMID:21281623 GO_REF:0000107 MGI:3714585 MGI:4949995 NCBI chr30:2,219,535...2,231,868
Ensembl chr30:2,222,898...2,225,418
JBrowse link
G HOXB7 homeobox B7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:24,870,037...24,874,517
Ensembl chr 9:24,870,612...24,873,453
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:47,952,019...47,995,530
Ensembl chr21:47,952,890...47,996,288
JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G MAGED1 MAGE family member D1 involved_in ISO (MGI:3848096|PMID:19268530) UniProt PMID:19268530 MGI:3848096 NCBI chr  X:44,395,091...44,458,705
Ensembl chr  X:44,395,015...44,458,705
JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:3704067|PMID:17314325), (MGI:3833510|PMID:17881463), (MGI:5009394|PMID:17538188) UniProt PMID:17314325 PMID:17538188 PMID:17881463 MGI:3704067 MGI:3833510 MGI:5009394 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PAX8 paired box 8 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:37,307,130...37,331,729
Ensembl chr17:37,306,033...37,363,178
JBrowse link
G SALL1 spalt like transcription factor 1 acts_upstream_of_or_within ISO (MGI:5563280|PMID:24550112) MGI PMID:24550112 MGI:5563280 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
G SIX1 SIX homeobox 1 acts_upstream_of_or_within
involved_in
ISO
ISS
IEA
(MGI:4949995|PMID:21281623) MGI
UniProt
Ensembl
PMID:21281623 GO_REF:0000024 GO_REF:0000107 MGI:4949995 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SIX4 SIX homeobox 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893
JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G SOX8 SRY-box transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,667,941...39,672,716
Ensembl chr 6:39,668,232...39,672,638
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
G WNT2B Wnt family member 2B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2150217|PMID:11507767) MGI
Ensembl
PMID:11507767 GO_REF:0000107 MGI:2150217 NCBI chr17:63,034,719...63,054,369
Ensembl chr17:63,035,883...63,047,956
JBrowse link
positive regulation of metanephric ureteric bud development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WT1 WT1 transcription factor involved_in ISO (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chr18:35,099,660...35,148,767
Ensembl chr18:35,103,934...35,148,000
JBrowse link
positive regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G SIX1 SIX homeobox 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SIX4 SIX homeobox 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893
JBrowse link
primary ureteric bud growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LZTS2 leucine zipper tumor suppressor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5297624|PMID:21949185) MGI
Ensembl
PMID:21949185 GO_REF:0000107 MGI:5297624 NCBI chr28:13,683,029...13,693,194
Ensembl chr28:13,684,034...13,692,521
JBrowse link
regulation of branch elongation involved in ureteric bud branching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430439|PMID:20040500) MGI
Ensembl
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993
JBrowse link
G SIX1 SIX homeobox 1 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534
JBrowse link
G SIX4 SIX homeobox 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:35,735,893...35,748,976
Ensembl chr 8:35,737,058...35,748,893
JBrowse link
regulation of branching involved in ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:47,399,152...47,403,503
Ensembl chr10:47,400,034...47,403,509
JBrowse link
regulation of ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDNF glial cell derived neurotrophic factor involved_in ISO PMID:19112489 UniProt PMID:19112489 RGD:8656008 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
ureteric bud elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNF1B HNF1 homeobox B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4430439|PMID:20040500) MGI
Ensembl
PMID:20040500 GO_REF:0000107 MGI:4430439 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993
JBrowse link
ureteric bud formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714
JBrowse link
G GREM1 gremlin 1, DAN family BMP antagonist involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:2,219,535...2,231,868
Ensembl chr30:2,222,898...2,225,418
JBrowse link
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1270048|PMID:9637690) MGI
Ensembl
PMID:9637690 GO_REF:0000107 MGI:1270048 NCBI chr 6:61,124,393...61,298,912 JBrowse link
G NOG noggin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
ureteric bud invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMN1 formin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:65439|PMID:7517224) MGI
Ensembl
PMID:7517224 GO_REF:0000107 MGI:65439 NCBI chr30:1,782,726...2,215,449
Ensembl chr30:1,815,512...2,184,909
JBrowse link
G KIF26B kinesin family member 26B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4454194|PMID:20439720) MGI
Ensembl
PMID:20439720 GO_REF:0000107 MGI:4454194 NCBI chr 7:36,087,483...36,529,334
Ensembl chr 7:36,088,050...36,522,653
JBrowse link
G SALL1 spalt like transcription factor 1 involved_in
acts_upstream_of_or_within
ISO (MGI:2149437|PMID:11688560)
(MGI:3665498|PMID:16839447)
UniProt
MGI
PMID:11688560 PMID:16839447 MGI:2149437 MGI:3665498 NCBI chr 2:64,242,742...64,260,021
Ensembl chr 2:64,243,987...64,259,521
JBrowse link
ureteric bud morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 involved_in IEA Ensembl GO_REF:0000107
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in ISO (MGI:3576186|PMID:15821257) UniProt PMID:15821257 MGI:3576186 NCBI chr29:27,185,191...27,188,121
Ensembl chr29:27,185,191...27,188,121
JBrowse link
G TACSTD2 tumor associated calcium signal transducer 2 involved_in ISO (MGI:5315060|PMID:22194864) UniProt PMID:22194864 MGI:5315060 NCBI chr 5:51,122,469...51,123,753 JBrowse link
G WNT11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:22,442,496...22,463,040
Ensembl chr21:22,446,051...22,463,173
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17869
    developmental process 6827
      anatomical structure development 6406
        tube development 1322
          mesonephric tubule development 119
            ureteric bud development 115
              anterior/posterior pattern specification involved in ureteric bud development + 0
              mesenchymal cell proliferation involved in ureteric bud development 2
              metanephric part of ureteric bud development + 5
              ureter part of ureteric bud development 0
              ureteric bud morphogenesis + 77
Path 2
Term Annotations click to browse term
  biological_process 17869
    developmental process 6827
      anatomical structure development 6406
        multicellular organism development 5154
          system development 4479
            renal system development 416
              kidney development 402
                mesonephros development 123
                  mesonephric epithelium development 119
                    mesonephric tubule development 119
                      ureteric bud development 115
                        anterior/posterior pattern specification involved in ureteric bud development + 0
                        mesenchymal cell proliferation involved in ureteric bud development 2
                        metanephric part of ureteric bud development + 5
                        ureter part of ureteric bud development 0
                        ureteric bud morphogenesis + 77
paths to the root