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ONTOLOGY REPORT - ANNOTATIONS


Term:eye development
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Accession:GO:0001654 term browser browse the term
Definition:The process whose specific outcome is the progression of the eye over time, from its formation to the mature structure. The eye is the organ of sight.
Synonyms:alt_id: GO:0042460
 xref: Wikipedia:Eye_development



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eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB5 ATP binding cassette subfamily B member 5 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:20,615,667...20,757,008
Ensembl chr 7:20,615,667...20,777,038
JBrowse link
G ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif 18 involved_in IMP (PMID:23818446) UniProt
UniProt
PMID:23818446 NCBI chr16:77,282,128...77,435,034
Ensembl chr16:77,247,813...77,435,034
JBrowse link
G ANHX anomalous homeobox involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr12:133,218,312...133,236,133
Ensembl chr12:133,218,312...133,235,877
JBrowse link
G ATF6 activating transcription factor 6 involved_in IMP (PMID:26029869) UniProt
UniProt
PMID:26029869 NCBI chr 1:161,766,320...161,964,070
Ensembl chr 1:161,766,298...161,977,574
JBrowse link
G BBS7 Bardet-Biedl syndrome 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5314314|PMID:22228099) Ensembl
Ensembl
MGI
PMID:22228099 GO_REF:0000107 MGI:5314314 NCBI chr 4:121,824,329...121,870,487
Ensembl chr 4:121,824,329...121,870,487
JBrowse link
G BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 involved_in IMP (PMID:16385460) UniProt
UniProt
PMID:16385460 NCBI chr19:45,178,784...45,202,715
Ensembl chr19:45,178,784...45,216,933
JBrowse link
G BMP4 bone morphogenetic protein 4 NOT|involved_in ISO (MGI:3610441|PMID:16154126) UniProt PMID:16154126 MGI:3610441 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G BMP6 bone morphogenetic protein 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:7,726,099...7,881,728
Ensembl chr 6:7,726,099...7,881,728
JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:2181740|PMID:12117821) UniProt
UniProt
Ensembl
MGI
PMID:12117821 GO_REF:0000024 GO_REF:0000107 MGI:2181740 NCBI chr 4:94,757,955...95,158,453
Ensembl chr 4:94,757,955...95,158,448
JBrowse link
G CHRDL1 chordin like 1 involved_in IMP (PMID:22284829) UniProt
UniProt
PMID:22284829 NCBI chr  X:110,673,856...110,795,817
Ensembl chr  X:110,673,856...110,795,819
JBrowse link
G CPAMD8 C3 and PZP like alpha-2-macroglobulin domain containing 8 involved_in IMP (PMID:27839872) UniProt
UniProt
PMID:27839872 NCBI chr19:16,892,951...17,026,818
Ensembl chr19:16,892,951...17,026,815
JBrowse link
G CRYGA crystallin gamma A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3042503|PMID:15037589) MGI
Ensembl
PMID:15037589 GO_REF:0000107 MGI:3042503 NCBI chr 2:208,160,740...208,163,589
Ensembl chr 2:208,160,740...208,163,589
JBrowse link
G CRYGB crystallin gamma B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3042503|PMID:15037589) MGI
Ensembl
PMID:15037589 GO_REF:0000107 MGI:3042503 NCBI chr 2:208,142,573...208,146,327
Ensembl chr 2:208,142,573...208,146,158
JBrowse link
G CRYGC crystallin gamma C acts_upstream_of_or_within ISO (MGI:3042503|PMID:15037589) MGI PMID:15037589 MGI:3042503 NCBI chr 2:208,128,137...208,139,100
Ensembl chr 2:208,128,137...208,129,828
JBrowse link
G CRYGD crystallin gamma D acts_upstream_of_or_within ISO (MGI:3042503|PMID:15037589) MGI PMID:15037589 MGI:3042503 NCBI chr 2:208,121,607...208,124,524
Ensembl chr 2:208,121,607...208,124,524
JBrowse link
G CST3 cystatin C ISO RGD PMID:11431459 RGD:2306512 NCBI chr20:23,626,706...23,637,955
Ensembl chr20:23,626,706...23,638,473
JBrowse link
G FGF9 fibroblast growth factor 9 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr13:21,671,073...21,704,501
Ensembl chr13:21,671,073...21,704,498
JBrowse link
G FOXC1 forkhead box C1 acts_upstream_of_or_within
involved_in
IDA
IEA
(PMID:9792859) MGI
Ensembl
MGI
PMID:9792859 GO_REF:0000107 NCBI chr 6:1,609,915...1,613,897
Ensembl chr 6:1,609,915...1,613,897
JBrowse link
G FOXE3 forkhead box E3 involved_in
acts_upstream_of_or_within
IMP
IEA
ISO
(PMID:27218149)
(MGI:1352262|PMID:10652278)
UniProt
UniProt
Ensembl
MGI
PMID:10652278 PMID:27218149 GO_REF:0000107 MGI:1352262 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052
JBrowse link
G FREM2 FRAS1 related extracellular matrix 2 involved_in
acts_upstream_of_or_within
IMP
IEA
ISO
(PMID:29688405), (PMID:30802441)
(MGI:5646594|PMID:26234751)
UniProt
Ensembl
UniProt
MGI
PMID:26234751 PMID:29688405 PMID:30802441 GO_REF:0000107 MGI:5646594 NCBI chr13:38,687,041...38,887,131
Ensembl chr13:38,687,077...38,887,131
JBrowse link
G GDF3 growth differentiation factor 3 involved_in IMP (PMID:19864492) UniProt
UniProt
PMID:19864492 NCBI chr12:7,689,784...7,695,775
Ensembl chr12:7,689,784...7,695,775
JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in ISS (PMID:20579985) UniProt
UniProt
PMID:20579985 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869
JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in ISS (PMID:20579985) UniProt
UniProt
PMID:20579985 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998
JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of_or_within ISO (MGI:1339514|PMID:10391216) MGI PMID:10391216 MGI:1339514 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G HSF4 heat shock transcription factor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3056236|PMID:15343150) MGI
Ensembl
PMID:15343150 GO_REF:0000107 MGI:3056236 NCBI chr16:67,163,761...67,169,941
Ensembl chr16:67,164,681...67,169,945
JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:5314314|PMID:22228099) MGI PMID:22228099 MGI:5314314 NCBI chr13:20,566,446...20,691,444
Ensembl chr13:20,567,138...20,691,444
JBrowse link
G MAB21L1 mab-21 like 1 involved_in IMP (PMID:27103078), (PMID:30487245) UniProt
UniProt
PMID:27103078 PMID:30487245 NCBI chr13:35,473,789...35,476,689
Ensembl chr13:35,473,789...35,476,689
JBrowse link
G MAB21L2 mab-21 like 2 involved_in IMP (PMID:24906020), (PMID:25719200) UniProt
UniProt
PMID:24906020 PMID:25719200 NCBI chr 4:150,582,151...150,584,693
Ensembl chr 4:150,582,151...150,584,693
JBrowse link
G MEIS1 Meis homeobox 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:66,435,125...66,573,869
Ensembl chr 2:66,433,452...66,573,869
JBrowse link
G MEIS2 Meis homeobox 2 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:2384485|PMID:12183364)
GO_Central
GO_Central
Ensembl
MGI
PMID:12183364 PMID:21873635 GO_REF:0000107 MGI:2384485 NCBI chr15:36,889,204...37,101,311
Ensembl chr15:36,889,204...37,101,299
JBrowse link
G MEIS3 Meis homeobox 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr19:47,403,124...47,422,233
Ensembl chr19:47,403,124...47,419,527
JBrowse link
G MEIS3P1 Meis homeobox 3 pseudogene 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:15,786,850...15,789,705
Ensembl chr17:15,786,618...15,787,575
JBrowse link
G MEIS3P2 Meis homeobox 3 pseudogene 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr17:20,588,850...20,590,815
Ensembl chr17:20,589,293...20,590,367
JBrowse link
G PAX6 paired box 6 involved_in TAS (PMID:10747901) PINC
PINC
PMID:10747901 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G PBX1 PBX homeobox 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:164,559,184...164,886,047
Ensembl chr 1:164,555,584...164,899,296
JBrowse link
G PBX2 PBX homeobox 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 6:32,184,733...32,190,202
Ensembl chr 6:32,184,733...32,190,202
JBrowse link
G PBX3 PBX homeobox 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:125,747,372...125,967,377
Ensembl chr 9:125,747,345...125,967,377
JBrowse link
G PBX4 PBX homeobox 4 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr19:19,561,713...19,618,690
Ensembl chr19:19,561,707...19,618,693
JBrowse link
G RAB18 RAB18, member RAS oncogene family involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr10:27,504,304...27,542,239
Ensembl chr10:27,504,174...27,543,207
JBrowse link
G RBP4 retinol binding protein 4 involved_in ISS
IMP
(PMID:10232633) BHF-UCL
BHF-UCL
PMID:10232633 GO_REF:0000024 NCBI chr10:93,591,694...93,601,744
Ensembl chr10:93,591,687...93,601,744
JBrowse link
G RS1 retinoschisin 1 involved_in TAS (PMID:9326935) PINC
PINC
PMID:9326935 NCBI chr  X:18,639,688...18,672,108
Ensembl chr  X:18,639,688...18,672,108
JBrowse link
G SALL2 spalt like transcription factor 2 involved_in IDA (PMID:24412933) UniProt
UniProt
PMID:24412933 NCBI chr14:21,521,080...21,537,142
Ensembl chr14:21,521,080...21,537,216
JBrowse link
G SCO2 synthesis of cytochrome C oxidase 2 involved_in IMP (PMID:23643385) UniProt
UniProt
PMID:23643385 NCBI chr22:50,523,568...50,526,442
Ensembl chr22:50,523,568...50,526,461
JBrowse link
G SH3PXD2B SH3 and PX domains 2B involved_in IEA
IMP
(PMID:20137777) InterPro
UniProt
InterPro
UniProt
PMID:20137777 GO_REF:0000002 NCBI chr 5:172,325,181...172,454,525
Ensembl chr 5:172,325,000...172,454,525
JBrowse link
G SIPA1L3 signal induced proliferation associated 1 like 3 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr19:37,906,822...38,208,369
Ensembl chr19:37,907,208...38,208,369
JBrowse link
G SIX3 SIX homeobox 3 involved_in
acts_upstream_of_or_within
IDA
IBA
IEA
ISO
(PMID:18791198)
(PMID:21873635)
(MGI:2182264|PMID:12050133)
UniProt
GO_Central
InterPro
UniProt
MGI
GO_Central
PMID:12050133 PMID:18791198 PMID:21873635 GO_REF:0000002 MGI:2182264 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071
JBrowse link
G SIX6 SIX homeobox 6 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr14:60,509,146...60,512,850
Ensembl chr14:60,509,146...60,512,850
JBrowse link
G SLC39A5 solute carrier family 39 member 5 involved_in IMP (PMID:24891338) UniProt
UniProt
PMID:24891338 NCBI chr12:56,230,036...56,237,850
Ensembl chr12:56,230,049...56,237,846
JBrowse link
G SMG9 SMG9 nonsense mediated mRNA decay factor involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr19:43,727,983...43,754,962
Ensembl chr19:43,727,983...43,754,962
JBrowse link
G SMOC1 SPARC related modular calcium binding 1 involved_in IMP (PMID:21194678) UniProt
UniProt
PMID:21194678 NCBI chr14:69,879,388...70,032,366
Ensembl chr14:69,854,131...70,032,366
JBrowse link
G SOX2 SRY-box transcription factor 2 involved_in IEP (PMID:18285410) UniProt
UniProt
PMID:18285410 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436
JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in IDA (PMID:15944186) UniProt
UniProt
PMID:15944186 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619
JBrowse link
G ZDHHC16 zinc finger DHHC-type palmitoyltransferase 16 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr10:97,446,143...97,457,370
Ensembl chr10:97,446,170...97,457,370
JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXN4 forkhead box N4 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:109,277,978...109,309,406
Ensembl chr12:109,277,978...109,309,284
JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chr 7:50,303,453...50,405,101
Ensembl chr 7:50,304,068...50,405,101
JBrowse link
G MIAT myocardial infarction associated transcript acts_upstream_of_or_within ISO (MGI:4458994|PMID:20459797) MGI PMID:20459797 MGI:4458994 NCBI chr22:26,657,482...26,676,478
Ensembl chr22:26,646,411...26,676,475
JBrowse link
G NEUROD1 neuronal differentiation 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:181,668,295...181,680,517
Ensembl chr 2:181,668,295...181,680,827
JBrowse link
G NEUROD4 neuronal differentiation 4 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:55,019,974...55,030,017
Ensembl chr12:55,019,974...55,030,017
JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:23,192,312...23,194,245
Ensembl chr10:23,192,312...23,194,245
JBrowse link
G RORB RAR related orphan receptor B involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 9:74,497,335...74,693,177
Ensembl chr 9:74,497,335...74,693,177
JBrowse link
camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 acts_upstream_of_or_within ISO (MGI:3525751|PMID:15572692) MGI PMID:15572692 MGI:3525751 NCBI chr 2:203,325,013...203,432,169
Ensembl chr 2:203,328,280...203,447,728
JBrowse link
G AHR aryl hydrocarbon receptor involved_in ISO (MGI:1889403|PMID:10973493) DFLAT PMID:10973493 MGI:1889403 NCBI chr 7:17,298,652...17,346,147
Ensembl chr 7:16,916,359...17,346,152
JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3055706|PMID:15366004)
(MGI:3612223|PMID:16368932)
MGI
Ensembl
PMID:15366004 PMID:16368932 GO_REF:0000107 MGI:3055706 MGI:3612223 NCBI chr15:57,953,429...58,065,711
Ensembl chr15:57,953,424...58,497,866
JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1926242|PMID:11044403) Ensembl
Ensembl
MGI
PMID:11044403 GO_REF:0000107 MGI:1926242 NCBI chr19:46,860,997...47,005,077
Ensembl chr19:46,860,997...47,005,077
JBrowse link
G B9D1 B9 domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5300833|PMID:22179047) Ensembl
Ensembl
MGI
PMID:22179047 GO_REF:0000107 MGI:5300833 NCBI chr17:19,334,695...19,377,913
Ensembl chr17:19,334,308...19,378,193
JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3043486|PMID:14681194)
(MGI:1095762|PMID:9268572)
MGI
Ensembl
PMID:9268572 PMID:14681194 GO_REF:0000107 MGI:1095762 MGI:3043486 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3574003|PMID:15673568) MGI
Ensembl
PMID:15673568 GO_REF:0000107 MGI:3574003 NCBI chr 4:94,757,955...95,158,453
Ensembl chr 4:94,757,955...95,158,448
JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C involved_in IMP (PMID:15454078) BHF-UCL
BHF-UCL
PMID:15454078 NCBI chr12:1,969,552...2,697,950
Ensembl chr12:1,970,772...2,697,950
JBrowse link
G CC2D2A coiled-coil and C2 domain containing 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5696765|PMID:24947469) Ensembl
Ensembl
MGI
PMID:24947469 GO_REF:0000107 MGI:5696765 NCBI chr 4:15,468,660...15,601,557
Ensembl chr 4:15,469,865...15,601,552
JBrowse link
G CDKN1C cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3839493|PMID:19276117) MGI
Ensembl
Ensembl
PMID:19276117 GO_REF:0000107 MGI:3839493 NCBI chr11:2,883,218...2,885,775
Ensembl chr11:2,883,213...2,885,775
JBrowse link
G CEP290 centrosomal protein 290 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3611161|PMID:16207732) MGI
Ensembl
PMID:16207732 GO_REF:0000107 MGI:3611161 NCBI chr 8:60,678,740...60,868,028
Ensembl chr 8:60,678,740...60,868,028
JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (MGI:2682441|PMID:12546709) MGI PMID:12546709 MGI:2682441 NCBI chr21:43,169,008...43,172,810
Ensembl chr21:43,169,008...43,172,805
JBrowse link
G CRYAB crystallin alpha B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2682441|PMID:12546709) MGI
Ensembl
PMID:12546709 GO_REF:0000107 MGI:2682441 NCBI chr11:111,908,564...111,923,740
Ensembl chr11:111,908,564...111,923,722
JBrowse link
G CRYBA1 crystallin beta A1 acts_upstream_of_or_within ISO (MGI:1350675|PMID:10585769) MGI PMID:10585769 MGI:1350675 NCBI chr17:29,246,859...29,254,494
Ensembl chr17:29,246,859...29,254,494
JBrowse link
G CRYBA4 crystallin beta A4 involved_in IMP (PMID:16960806) UniProt
UniProt
PMID:16960806 NCBI chr22:26,607,982...26,630,672
Ensembl chr22:26,621,963...26,630,669
JBrowse link
G CRYBB2 crystallin beta B2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2137502|PMID:11381063) RGD
Ensembl
MGI
PMID:8706714 PMID:11381063 GO_REF:0000107 MGI:2137502 RGD:1298813 NCBI chr22:25,211,660...25,231,869
Ensembl chr22:25,212,564...25,231,870
JBrowse link
G CRYGC crystallin gamma C acts_upstream_of_or_within ISO (MGI:2156903|PMID:11773036) MGI PMID:11773036 MGI:2156903 NCBI chr 2:208,128,137...208,139,100
Ensembl chr 2:208,128,137...208,129,828
JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:15967433 GO_REF:0000107 RGD:2306661 NCBI chr15:74,719,542...74,725,528
Ensembl chr15:74,719,542...74,725,536
JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 involved_in IEP (PMID:25406291) UniProt
UniProt
PMID:25406291 NCBI chr 2:55,865,967...55,924,163
Ensembl chr 2:55,865,967...55,924,139
JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:186,587,789...186,726,696
Ensembl chr 4:186,587,794...186,726,722
JBrowse link
G FBN1 fibrillin 1 involved_in IEP (PMID:25406291) UniProt
UniProt
PMID:25406291 NCBI chr15:48,408,313...48,645,709
Ensembl chr15:48,408,313...48,645,721
JBrowse link
G FBN2 fibrillin 2 involved_in IEP (PMID:25406291) UniProt
UniProt
PMID:25406291 NCBI chr 5:128,257,909...128,538,245
Ensembl chr 5:128,257,909...128,659,185
JBrowse link
G FKBP8 FKBP prolyl isomerase 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3039989|PMID:15105374) Ensembl
Ensembl
MGI
PMID:15105374 GO_REF:0000107 MGI:3039989 NCBI chr19:18,531,763...18,543,573
Ensembl chr19:18,531,751...18,544,077
JBrowse link
G FOXC1 forkhead box C1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1355577|PMID:10767326)
(MGI:1340945|PMID:10395790)
Ensembl
Ensembl
MGI
PMID:10395790 PMID:10767326 GO_REF:0000107 MGI:1340945 MGI:1355577 NCBI chr 6:1,609,915...1,613,897
Ensembl chr 6:1,609,915...1,613,897
JBrowse link
G FOXC2 forkhead box C2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1355577|PMID:10767326) Ensembl
Ensembl
MGI
PMID:10767326 GO_REF:0000107 MGI:1355577 NCBI chr16:86,566,829...86,569,728
Ensembl chr16:86,566,829...86,569,728
JBrowse link
G FOXE3 forkhead box E3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1932584|PMID:11309658) MGI
Ensembl
PMID:11309658 GO_REF:0000107 MGI:1932584 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052
JBrowse link
G FOXP2 forkhead box P2 acts_upstream_of_or_within ISO (MGI:3723373|PMID:17619227) MGI PMID:17619227 MGI:3723373 NCBI chr 7:114,086,327...114,693,765
Ensembl chr 7:114,086,327...114,693,772
JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (MGI:3713422|PMID:17525797) MGI PMID:17525797 MGI:3713422 NCBI chr 9:86,944,362...86,947,506
Ensembl chr 9:86,944,362...86,947,506
JBrowse link
G GJA8 gap junction protein alpha 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3047041|PMID:15253273)
(MGI:2156142|PMID:11782410)
MGI
Ensembl
PMID:11782410 PMID:15253273 GO_REF:0000107 MGI:2156142 MGI:3047041 NCBI chr 1:147,902,795...147,915,287
Ensembl chr 1:147,902,795...147,909,269
JBrowse link
G GLI3 GLI family zinc finger 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3807419|PMID:18582859) MGI
Ensembl
PMID:18582859 GO_REF:0000107 MGI:3807419 NCBI chr 7:41,960,949...42,237,209
Ensembl chr 7:41,960,949...42,264,100
JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 acts_upstream_of_or_within ISO (MGI:4947900|PMID:21296886) MGI PMID:21296886 MGI:4947900 NCBI chr 2:156,435,290...156,586,403
Ensembl chr 2:156,435,290...156,613,735
JBrowse link
G GRHL2 grainyhead like transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4943100|PMID:21377456) Ensembl
Ensembl
MGI
PMID:21377456 GO_REF:0000107 MGI:4943100 NCBI chr 8:101,492,439...101,678,104
Ensembl chr 8:101,492,439...101,669,726
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:2,528,745...2,530,554
Ensembl chr 1:2,528,745...2,530,263
JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3821905|PMID:19093031) Ensembl
Ensembl
MGI
PMID:19093031 GO_REF:0000107 MGI:3821905 NCBI chr 3:57,197,838...57,227,643
Ensembl chr 3:57,197,838...57,227,606
JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chr 9:83,968,083...83,980,630
Ensembl chr 9:83,968,083...83,980,616
JBrowse link
G HSF4 heat shock transcription factor 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3056833|PMID:15483628)
(MGI:3721138|PMID:16595169)
MGI
Ensembl
PMID:15483628 PMID:16595169 GO_REF:0000107 MGI:3056833 MGI:3721138 NCBI chr16:67,163,761...67,169,941
Ensembl chr16:67,164,681...67,169,945
JBrowse link
G IHH Indian hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3807419|PMID:18582859) MGI
Ensembl
PMID:18582859 GO_REF:0000107 MGI:3807419 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921
JBrowse link
G JAG1 jagged canonical Notch ligand 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1336582|PMID:10196361) MGI
Ensembl
PMID:10196361 GO_REF:0000107 MGI:1336582 NCBI chr20:10,637,684...10,673,999
Ensembl chr20:10,637,684...10,673,999
JBrowse link
G LAMA1 laminin subunit alpha 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G LIM2 lens intrinsic membrane protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1197732|PMID:9238094) MGI
Ensembl
PMID:9238094 GO_REF:0000107 MGI:1197732 NCBI chr19:51,379,909...51,387,974
Ensembl chr19:51,379,909...51,387,974
JBrowse link
G LMX1B LIM homeobox transcription factor 1 beta acts_upstream_of_or_within ISO (MGI:1353150|PMID:10660670)
(MGI:4461349|PMID:20568247)
MGI PMID:10660670 PMID:20568247 MGI:1353150 MGI:4461349 NCBI chr 9:126,613,928...126,701,032
Ensembl chr 9:126,613,928...126,701,032
JBrowse link
G MAB21L1 mab-21 like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2652201|PMID:12642482) Ensembl
Ensembl
MGI
PMID:12642482 GO_REF:0000107 MGI:2652201 NCBI chr13:35,473,789...35,476,689
Ensembl chr13:35,473,789...35,476,689
JBrowse link
G MAB21L2 mab-21 like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3510098|PMID:15385160) Ensembl
Ensembl
MGI
PMID:15385160 GO_REF:0000107 MGI:3510098 NCBI chr 4:150,582,151...150,584,693
Ensembl chr 4:150,582,151...150,584,693
JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (MGI:2674169|PMID:12941696) MGI PMID:12941696 MGI:2674169 NCBI chr 5:56,815,543...56,896,152
Ensembl chr 5:56,815,549...56,896,152
JBrowse link
G MED1 mediator complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2682174|PMID:14500757) MGI
Ensembl
PMID:14500757 GO_REF:0000107 MGI:2682174 NCBI chr17:39,404,285...39,451,281
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G MITF melanocyte inducing transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3512656|PMID:15576400) Ensembl
Ensembl
MGI
PMID:15576400 GO_REF:0000107 MGI:3512656 NCBI chr 3:69,739,464...69,968,332
Ensembl chr 3:69,739,456...69,968,336
JBrowse link
G MTERF4 mitochondrial transcription termination factor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5287350|PMID:21531335) Ensembl
Ensembl
MGI
PMID:21531335 GO_REF:0000107 MGI:5287350 NCBI chr 2:241,072,168...241,102,321
Ensembl chr 2:241,072,169...241,102,332
JBrowse link
G MTNR1A melatonin receptor 1A ISO RGD PMID:12890503 RGD:9588674 NCBI chr 4:186,532,769...186,555,567
Ensembl chr 4:186,533,655...186,555,567
JBrowse link
G MTNR1B melatonin receptor 1B involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:12890503 GO_REF:0000107 RGD:9588674 NCBI chr11:92,969,651...92,986,241
Ensembl chr11:92,969,651...92,985,066
JBrowse link
G MYF5 myogenic factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3849775|PMID:19531352) Ensembl
Ensembl
MGI
PMID:19531352 GO_REF:0000107 MGI:3849775 NCBI chr12:80,716,912...80,719,671
Ensembl chr12:80,716,912...80,719,671
JBrowse link
G NEUROD1 neuronal differentiation 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2158684|PMID:11861467) MGI
Ensembl
PMID:11861467 GO_REF:0000107 MGI:2158684 NCBI chr 2:181,668,295...181,680,517
Ensembl chr 2:181,668,295...181,680,827
JBrowse link
G NEUROD4 neuronal differentiation 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2158684|PMID:11861467) MGI
Ensembl
PMID:11861467 GO_REF:0000107 MGI:2158684 NCBI chr12:55,019,974...55,030,017
Ensembl chr12:55,019,974...55,030,017
JBrowse link
G NR2E1 nuclear receptor subfamily 2 group E member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3054148|PMID:15371513)
(MGI:3582135|PMID:16000615)
MGI
Ensembl
PMID:15371513 PMID:16000615 GO_REF:0000107 MGI:3054148 MGI:3582135 NCBI chr 6:108,166,022...108,188,809
Ensembl chr 6:108,166,022...108,188,805
JBrowse link
G PAX2 paired box 2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2662558|PMID:12756174) UniProt
UniProt
MGI
PMID:12756174 GO_REF:0000024 MGI:2662558 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2654287|PMID:12648492), (MGI:3584303|PMID:16080917)
(MGI:1927276|PMID:11069887)
(MGI:2384485|PMID:12183364)
(MGI:2662558|PMID:12756174)
(MGI:1928799|PMID:11062307)
(MGI:2181466|PMID:12072567)
MGI
Ensembl
PMID:11062307 PMID:11069887 PMID:12072567 PMID:12183364 PMID:12648492 More... GO_REF:0000107 MGI:1927276 MGI:1928799 MGI:2181466 MGI:2384485 MGI:2654287 MGI:2662558 MGI:3584303 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G PCNT pericentrin acts_upstream_of_or_within ISO (MGI:5696764|PMID:25220058) MGI PMID:25220058 MGI:5696764 NCBI chr21:46,324,122...46,445,769
Ensembl chr21:46,324,141...46,445,769
JBrowse link
G PITX2 paired like homeodomain 2 involved_in IMP (PMID:9618168) BHF-UCL
BHF-UCL
PMID:9618168 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123
JBrowse link
G PKNOX1 PBX/knotted 1 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3653971|PMID:16847320) Ensembl
Ensembl
MGI
PMID:16847320 GO_REF:0000107 MGI:3653971 NCBI chr21:42,974,562...43,033,931
Ensembl chr21:42,974,510...43,033,931
JBrowse link
G PRSS56 serine protease 56 involved_in
acts_upstream_of_or_within
IMP
IEA
ISO
(PMID:21397065)
(MGI:5441705|PMID:21532570)
UniProt
UniProt
Ensembl
MGI
PMID:21397065 PMID:21532570 GO_REF:0000107 MGI:5441705 NCBI chr 2:232,520,388...232,525,716
Ensembl chr 2:232,520,388...232,525,716
JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IMP (PMID:20512159) BHF-UCL
BHF-UCL
PMID:20512159 NCBI chr 2:135,052,281...135,176,667
Ensembl chr 2:135,052,289...135,176,667
JBrowse link
G RARG retinoic acid receptor gamma acts_upstream_of_or_within ISO (MGI:1096258|PMID:9376317) MGI PMID:9376317 MGI:1096258 NCBI chr12:53,210,569...53,232,231
Ensembl chr12:53,210,567...53,232,980
JBrowse link
G RAX retina and anterior neural fold homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:48767|PMID:17247120), (MGI:54439|PMID:640224), (MGI:61292|PMID:13970081)
(MGI:1929394|PMID:11105055), (MGI:3575215|PMID:15789424)
Ensembl
Ensembl
MGI
PMID:640224 PMID:11105055 PMID:13970081 PMID:15789424 PMID:17247120 GO_REF:0000107 MGI:1929394 MGI:3575215 MGI:48767 MGI:54439 MGI:61292 NCBI chr18:59,267,038...59,273,454
Ensembl chr18:59,267,035...59,274,086
JBrowse link
G RCN1 reticulocalbin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4355498|PMID:19474196) MGI
Ensembl
Ensembl
PMID:19474196 GO_REF:0000107 MGI:4355498 NCBI chr11:32,091,074...32,105,722
Ensembl chr11:32,091,074...32,105,722
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in ISO
IEA
RGD
Ensembl
PMID:9512345 GO_REF:0000107 RGD:633787 NCBI chr 1:68,428,822...68,450,322
Ensembl chr 1:68,428,822...68,449,954
JBrowse link
G RPGRIP1L RPGRIP1 like acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3715393|PMID:17553904), (MGI:3716248|PMID:17558409) MGI
Ensembl
PMID:17553904 PMID:17558409 GO_REF:0000107 MGI:3715393 MGI:3716248 NCBI chr16:53,598,153...53,703,859
Ensembl chr16:53,598,153...53,703,938
JBrowse link
G RXRA retinoid X receptor alpha acts_upstream_of_or_within ISO (MGI:1096258|PMID:9376317) MGI PMID:9376317 MGI:1096258 NCBI chr 9:134,326,455...134,440,585
Ensembl chr 9:134,317,098...134,440,585
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2662556|PMID:12756179)
(MGI:3608482|PMID:16236765)
(MGI:2385969|PMID:12195432)
(MGI:3807419|PMID:18582859)
Ensembl
Ensembl
MGI
PMID:12195432 PMID:12756179 PMID:16236765 PMID:18582859 GO_REF:0000107 MGI:2385969 MGI:2662556 MGI:3608482 MGI:3807419 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SHROOM2 shroom family member 2 involved_in ISS HGNC-UCL
HGNC-UCL
GO_REF:0000024 NCBI chr  X:9,786,406...9,949,443
Ensembl chr  X:9,786,429...9,949,443
JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (MGI:2181466|PMID:12072567) MGI PMID:12072567 MGI:2181466 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071
JBrowse link
G SKI SKI proto-oncogene involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2176418|PMID:11731796) BHF-UCL
BHF-UCL
MGI
PMID:11731796 GO_REF:0000024 MGI:2176418 NCBI chr 1:2,228,319...2,310,213
Ensembl chr 1:2,228,319...2,310,213
JBrowse link
G SLC25A25 solute carrier family 25 member 25 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4947900|PMID:21296886) Ensembl
Ensembl
MGI
PMID:21296886 GO_REF:0000107 MGI:4947900 NCBI chr 9:128,068,200...128,109,245
Ensembl chr 9:128,068,201...128,109,245
JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5513052|PMID:23543054) MGI
Ensembl
PMID:23543054 GO_REF:0000107 MGI:5513052 NCBI chr13:85,792,790...85,799,419
Ensembl chr13:85,792,790...85,806,683
JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IMP (PMID:21901792) UniProt
UniProt
PMID:21901792 NCBI chr15:74,179,466...74,212,267
Ensembl chr15:74,179,466...74,212,267
JBrowse link
G TBC1D20 TBC1 domain family member 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3029604|PMID:14757819) MGI
Ensembl
PMID:14757819 GO_REF:0000107 MGI:3029604 NCBI chr20:435,480...462,543
Ensembl chr20:423,596...462,566
JBrowse link
G TBC1D32 TBC1 domain family member 32 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4439200|PMID:20159594) MGI
Ensembl
PMID:20159594 GO_REF:0000107 MGI:4439200 NCBI chr 6:121,079,494...121,335,384
Ensembl chr 6:121,079,494...121,334,745
JBrowse link
G TMEM231 transmembrane protein 231 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5300833|PMID:22179047) Ensembl
Ensembl
MGI
PMID:22179047 GO_REF:0000107 MGI:5300833 NCBI chr16:75,536,741...75,556,286
Ensembl chr16:75,536,741...75,556,289
JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within
involved_in
ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:76,782,280...76,798,144
Ensembl chr11:76,782,251...76,798,153
JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3043486|PMID:14681194) Ensembl
Ensembl
MGI
PMID:14681194 GO_REF:0000107 MGI:3043486 NCBI chr18:9,334,773...9,402,420
Ensembl chr18:9,334,767...9,402,420
JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578573|PMID:15905411) Ensembl
Ensembl
MGI
PMID:15905411 GO_REF:0000107 MGI:3578573 NCBI chr10:117,128,520...117,138,270
Ensembl chr10:117,128,521...117,138,301
JBrowse link
G VAX2 ventral anterior homeobox 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3578573|PMID:15905411) MGI
Ensembl
PMID:15905411 GO_REF:0000107 MGI:3578573 NCBI chr 2:70,900,551...70,933,917
Ensembl chr 2:70,900,576...70,965,373
JBrowse link
G VSX2 visual system homeobox 2 acts_upstream_of_or_within ISO (MGI:3512656|PMID:15576400) MGI PMID:15576400 MGI:3512656 NCBI chr14:74,239,449...74,262,738
Ensembl chr14:74,239,449...74,262,738
JBrowse link
G WDPCP WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5544506|PMID:24302887) Ensembl
Ensembl
MGI
PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chr 2:63,119,559...63,588,733
Ensembl chr 2:63,119,559...63,827,843
JBrowse link
G WT1 WT1 transcription factor involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3574744|PMID:15716344)
(MGI:2176638|PMID:11889045)
UniProt
UniProt
MGI
PMID:11889045 PMID:15716344 GO_REF:0000024 MGI:2176638 MGI:3574744 NCBI chr11:32,387,775...32,435,539
Ensembl chr11:32,387,775...32,435,564
JBrowse link
camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) acts_upstream_of_or_within ISO (MGI:2180433|PMID:11891232) MGI PMID:11891232 MGI:2180433 NCBI chr 7:30,911,853...30,925,516
Ensembl chr 7:30,911,853...30,925,517
JBrowse link
G AQP5 aquaporin 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2180433|PMID:11891232) Ensembl
Ensembl
MGI
PMID:11891232 GO_REF:0000107 MGI:2180433 NCBI chr12:49,961,855...49,965,682
Ensembl chr12:49,961,872...49,965,682
JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1095762|PMID:9268572) MGI
Ensembl
PMID:9268572 GO_REF:0000107 MGI:1095762 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G BMP7 bone morphogenetic protein 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3610441|PMID:16154126)
(MGI:3701027|PMID:16854970)
MGI
Ensembl
PMID:16154126 PMID:16854970 GO_REF:0000107 MGI:3610441 MGI:3701027 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G C12orf57 chromosome 12 open reading frame 57 involved_in IMP (PMID:23453665), (PMID:23633300), (PMID:24798461) UniProt
UniProt
PMID:23453665 PMID:23633300 PMID:24798461 NCBI chr12:6,943,433...6,946,003
Ensembl chr12:6,942,978...6,946,003
JBrowse link
G COL8A1 collagen type VIII alpha 1 chain involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3587134|PMID:16051690) Ensembl
Ensembl
MGI
PMID:16051690 GO_REF:0000107 MGI:3587134 NCBI chr 3:99,638,594...99,799,217
Ensembl chr 3:99,638,475...99,799,226
JBrowse link
G COL8A2 collagen type VIII alpha 2 chain involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3587134|PMID:16051690) Ensembl
Ensembl
MGI
PMID:16051690 GO_REF:0000107 MGI:3587134 NCBI chr 1:36,095,239...36,126,207
Ensembl chr 1:36,095,239...36,125,222
JBrowse link
G EPHB1 EPH receptor B1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2675767|PMID:12971893) Ensembl
Ensembl
MGI
PMID:12971893 GO_REF:0000107 MGI:2675767 NCBI chr 3:134,795,260...135,260,467
Ensembl chr 3:134,795,260...135,260,467
JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2675767|PMID:12971893) Ensembl
Ensembl
MGI
PMID:12971893 GO_REF:0000107 MGI:2675767 NCBI chr 1:22,710,770...22,921,500
Ensembl chr 1:22,710,839...22,921,500
JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:186,587,789...186,726,696
Ensembl chr 4:186,587,794...186,726,722
JBrowse link
G GDF11 growth differentiation factor 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3581514|PMID:15976303) MGI
Ensembl
Ensembl
PMID:15976303 GO_REF:0000107 MGI:3581514 NCBI chr12:55,743,122...55,757,264
Ensembl chr12:55,743,122...55,757,264
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:52587|PMID:8387379) Ensembl
Ensembl
MGI
PMID:8387379 GO_REF:0000107 MGI:52587 NCBI chr 7:41,960,949...42,237,209
Ensembl chr 7:41,960,949...42,264,100
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5429122|PMID:22627278) MGI
Ensembl
PMID:22627278 GO_REF:0000107 MGI:5429122 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259
JBrowse link
G IFT122 intraflagellar transport 122 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 3:129,440,075...129,520,507
Ensembl chr 3:129,429,607...129,520,510
JBrowse link
G MFN2 mitofusin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3589043|PMID:16104381) MGI
Ensembl
Ensembl
PMID:16104381 GO_REF:0000107 MGI:3589043 NCBI chr 1:11,980,215...12,013,508
Ensembl chr 1:11,980,181...12,015,211
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3604842|PMID:15728677) MGI
Ensembl
PMID:15728677 GO_REF:0000107 MGI:3604842 NCBI chr11:119,638,098...119,729,200
Ensembl chr11:119,623,408...119,729,200
JBrowse link
G NF1 neurofibromin 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:66069|PMID:7926784) HGNC-UCL
HGNC-UCL
Ensembl
MGI
PMID:7926784 GO_REF:0000024 GO_REF:0000107 MGI:66069 NCBI chr17:31,094,927...31,377,677
Ensembl chr17:31,094,927...31,382,116
JBrowse link
G RING1 ring finger protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3628673|PMID:16624538) Ensembl
Ensembl
MGI
PMID:16624538 GO_REF:0000107 MGI:3628673 NCBI chr 6:33,208,500...33,212,716
Ensembl chr 6:33,208,500...33,212,722
JBrowse link
G SHROOM2 shroom family member 2 involved_in ISS HGNC-UCL
HGNC-UCL
GO_REF:0000024 NCBI chr  X:9,786,406...9,949,443
Ensembl chr  X:9,786,429...9,949,443
JBrowse link
G SKI SKI proto-oncogene involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3693412|PMID:17003410) BHF-UCL
BHF-UCL
MGI
PMID:17003410 GO_REF:0000024 MGI:3693412 NCBI chr 1:2,228,319...2,310,213
Ensembl chr 1:2,228,319...2,310,213
JBrowse link
G TENM3 teneurin transmembrane protein 3 involved_in IMP (PMID:22766609) UniProt
UniProt
PMID:22766609 NCBI chr 4:181,447,613...182,803,024
Ensembl chr 4:182,143,987...182,803,024
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3607459|PMID:16251428) BHF-UCL
BHF-UCL
MGI
PMID:16251428 GO_REF:0000024 MGI:3607459 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G VHL von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (MGI:5429122|PMID:22627278) MGI PMID:22627278 MGI:5429122 NCBI chr 3:10,141,778...10,153,667
Ensembl chr 3:10,141,778...10,153,667
JBrowse link
G YY1 YY1 transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3628673|PMID:16624538) Ensembl
Ensembl
MGI
PMID:16624538 GO_REF:0000107 MGI:3628673 NCBI chr14:100,239,144...100,282,788
Ensembl chr14:100,238,298...100,282,788
JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSCAM DS cell adhesion molecule involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr21:40,010,999...40,847,158
Ensembl chr21:40,010,999...40,847,158
JBrowse link
G PROM1 prominin 1 involved_in ISS
IMP
IBA
(PMID:18654668)
(PMID:21873635)
UniProt
BHF-UCL
GO_Central
UniProt
GO_Central
BHF-UCL
PMID:18654668 PMID:21873635 GO_REF:0000024 NCBI chr 4:15,968,226...16,084,059
Ensembl chr 4:15,963,076...16,084,378
JBrowse link
G ROM1 retinal outer segment membrane protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4437581|PMID:20300562) Ensembl
Ensembl
MGI
PMID:20300562 GO_REF:0000107 MGI:4437581 NCBI chr11:62,613,257...62,615,116
Ensembl chr11:62,611,722...62,615,116
JBrowse link
G SDK2 sidekick cell adhesion molecule 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:73,334,384...73,644,481
Ensembl chr17:73,334,384...73,644,445
JBrowse link
G SLC4A7 solute carrier family 4 member 7 acts_upstream_of_or_within ISO (MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:2680888 NCBI chr 3:27,372,721...27,484,420
Ensembl chr 3:27,372,721...27,484,420
JBrowse link
G TTC8 tetratricopeptide repeat domain 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5014119|PMID:21646512) Ensembl
Ensembl
MGI
PMID:21646512 GO_REF:0000107 MGI:5014119 NCBI chr14:88,824,153...88,881,079
Ensembl chr14:88,824,153...88,881,078
JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807419|PMID:18582859) Ensembl
Ensembl
MGI
PMID:18582859 GO_REF:0000107 MGI:3807419 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921
JBrowse link
ciliary body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in ISS
IEA
(PMID:17064680) UniProt
Ensembl
UniProt
PMID:17064680 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052
JBrowse link
G JAG1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5492288|PMID:23676271) Ensembl
Ensembl
MGI
PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chr20:10,637,684...10,673,999
Ensembl chr20:10,637,684...10,673,999
JBrowse link
G NOTCH2 notch receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5492288|PMID:23676271) Ensembl
Ensembl
MGI
PMID:23676271 GO_REF:0000107 MGI:5492288 NCBI chr 1:119,911,553...120,069,662
Ensembl chr 1:119,911,553...120,100,779
JBrowse link
G TSKU tsukushi, small leucine rich proteoglycan acts_upstream_of_or_within
involved_in
ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:76,782,280...76,798,144
Ensembl chr11:76,782,251...76,798,153
JBrowse link
G VHL von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (MGI:5429122|PMID:22627278) MGI PMID:22627278 MGI:5429122 NCBI chr 3:10,141,778...10,153,667
Ensembl chr 3:10,141,778...10,153,667
JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHACTR4 phosphatase and actin regulator 4 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 1:28,369,740...28,500,364
Ensembl chr 1:28,369,582...28,500,364
JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385
JBrowse link
cornea development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in ISS
IEA
(PMID:17064680) UniProt
UniProt
Ensembl
PMID:17064680 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052
JBrowse link
G KERA keratocan involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1855733|PMID:10802664) Ensembl
Ensembl
MGI
PMID:10802664 GO_REF:0000107 MGI:1855733 NCBI chr12:91,050,491...91,058,024
Ensembl chr12:91,050,491...91,058,024
JBrowse link
G KRT12 keratin 12 involved_in
acts_upstream_of_or_within
IMP
ISO
(PMID:26758872)
(MGI:85415|PMID:8977471)
UniProt
UniProt
MGI
PMID:8977471 PMID:26758872 MGI:85415 NCBI chr17:40,861,303...40,867,223
Ensembl chr17:40,861,303...40,867,223
JBrowse link
G LIMK2 LIM domain kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5646594|PMID:26234751) Ensembl
Ensembl
MGI
PMID:26234751 GO_REF:0000107 MGI:5646594 NCBI chr22:31,212,298...31,280,080
Ensembl chr22:31,212,239...31,280,080
JBrowse link
G PAX6 paired box 6 involved_in IMP (PMID:7550230) DFLAT
DFLAT
PMID:7550230 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385
JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:3610667|PMID:16186342) MGI PMID:16186342 MGI:3610667 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659
JBrowse link
G TWIST2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO (MGI:4949824|PMID:20574024) MGI PMID:20574024 MGI:4949824 NCBI chr 2:238,848,085...238,910,534
Ensembl chr 2:238,848,032...238,910,534
JBrowse link
G WNT2B Wnt family member 2B involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165
JBrowse link
G WNT6 Wnt family member 6 involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 2:218,859,805...218,874,233
Ensembl chr 2:218,859,805...218,874,233
JBrowse link
G WNT9A Wnt family member 9A involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 1:227,918,656...227,947,932
Ensembl chr 1:227,918,656...227,947,932
JBrowse link
G WNT9B Wnt family member 9B involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr17:46,833,201...46,886,738
Ensembl chr17:46,833,201...46,886,730
JBrowse link
embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3700411|PMID:17184764) Ensembl
Ensembl
MGI
PMID:17184764 GO_REF:0000107 MGI:3700411 NCBI chr15:57,953,429...58,065,711
Ensembl chr15:57,953,424...58,497,866
JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3700411|PMID:17184764) UniProt
Ensembl
UniProt
MGI
PMID:17184764 GO_REF:0000024 GO_REF:0000107 MGI:3700411 NCBI chr15:100,879,831...100,916,626
Ensembl chr15:100,877,714...100,916,626
JBrowse link
G CDK20 cyclin dependent kinase 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5912686|PMID:28817564) MGI
Ensembl
Ensembl
PMID:28817564 GO_REF:0000107 MGI:5912686 NCBI chr 9:87,966,441...87,974,708
Ensembl chr 9:87,966,441...87,974,753
JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588480|PMID:15958512) Ensembl
Ensembl
MGI
PMID:15958512 GO_REF:0000107 MGI:3588480 NCBI chr 5:44,300,247...44,389,706
Ensembl chr 5:44,300,247...44,389,706
JBrowse link
G FZD5 frizzled class receptor 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3821812|PMID:18791178) MGI
Ensembl
PMID:18791178 GO_REF:0000107 MGI:3821812 NCBI chr 2:207,753,889...207,769,906
Ensembl chr 2:207,762,598...207,769,906
JBrowse link
G IFT140 intraflagellar transport 140 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5505384|PMID:23469164) Ensembl
Ensembl
MGI
PMID:23469164 GO_REF:0000107 MGI:5505384 NCBI chr16:1,510,427...1,612,072
Ensembl chr16:1,510,427...1,612,072
JBrowse link
G NES nestin involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 1:156,668,763...156,677,407
Ensembl chr 1:156,668,763...156,677,407
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:1344731|PMID:10498698)
(MGI:1347482|PMID:10572050)
MGI PMID:10498698 PMID:10572050 MGI:1344731 MGI:1347482 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123
JBrowse link
G PPP1R13L protein phosphatase 1 regulatory subunit 13 like involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3530389|PMID:15661756) Ensembl
Ensembl
MGI
PMID:15661756 GO_REF:0000107 MGI:3530389 NCBI chr19:45,379,634...45,406,361
Ensembl chr19:45,379,638...45,406,349
JBrowse link
G RARA retinoic acid receptor alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69060|PMID:7607067) Ensembl
Ensembl
MGI
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chr17:40,309,180...40,357,643
Ensembl chr17:40,309,180...40,357,643
JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69060|PMID:7607067) Ensembl
Ensembl
MGI
PMID:7607067 GO_REF:0000107 MGI:69060 NCBI chr12:53,210,569...53,232,231
Ensembl chr12:53,210,567...53,232,980
JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709664|PMID:17473173) Ensembl
Ensembl
MGI
PMID:17473173 GO_REF:0000107 MGI:3709664 NCBI chr 8:73,294,602...73,325,281
Ensembl chr 8:73,294,602...73,325,281
JBrowse link
G TRAF3IP1 TRAF3 interacting protein 1 acts_upstream_of_or_within ISO (MGI:5298450|PMID:21945076) MGI PMID:21945076 MGI:5298450 NCBI chr 2:238,320,489...238,400,900
Ensembl chr 2:238,320,441...238,400,897
JBrowse link
G TULP3 TUB like protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3841503|PMID:19286674) Ensembl
Ensembl
MGI
PMID:19286674 GO_REF:0000107 MGI:3841503 NCBI chr12:2,890,891...2,941,138
Ensembl chr12:2,877,223...2,941,138
JBrowse link
G WDR19 WD repeat domain 19 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5314316|PMID:22228095) Ensembl
Ensembl
MGI
PMID:22228095 GO_REF:0000107 MGI:5314316 NCBI chr 4:39,182,473...39,285,810
Ensembl chr 4:39,182,504...39,285,810
JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IMP (PMID:17273977) DFLAT
DFLAT
PMID:17273977 NCBI chr15:74,179,466...74,212,267
Ensembl chr15:74,179,466...74,212,267
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IMP (PMID:17070479) BHF-UCL
BHF-UCL
PMID:17070479 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636
JBrowse link
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1332362|PMID:10049573) Ensembl
Ensembl
MGI
PMID:10049573 GO_REF:0000107 MGI:1332362 NCBI chr20:57,168,753...57,266,641
Ensembl chr20:57,168,753...57,266,641
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807101|PMID:18653562) Ensembl
Ensembl
MGI
PMID:18653562 GO_REF:0000107 MGI:3807101 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648
JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (MGI:3775669|PMID:18056999) MGI PMID:18056999 MGI:3775669 NCBI chr21:43,169,008...43,172,810
Ensembl chr21:43,169,008...43,172,805
JBrowse link
G FOXF2 forkhead box F2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:1,389,576...1,395,603
Ensembl chr 6:1,389,576...1,395,603
JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:207,753,889...207,769,906
Ensembl chr 2:207,762,598...207,769,906
JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869
JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998
JBrowse link
G IFT122 intraflagellar transport 122 acts_upstream_of_or_within ISO (MGI:6094959|PMID:28778798) MGI PMID:28778798 MGI:6094959 NCBI chr 3:129,440,075...129,520,507
Ensembl chr 3:129,429,607...129,520,510
JBrowse link
G IFT172 intraflagellar transport 172 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6094959|PMID:28778798) Ensembl
Ensembl
MGI
PMID:28778798 GO_REF:0000107 MGI:6094959 NCBI chr 2:27,444,373...27,489,819
Ensembl chr 2:27,444,377...27,489,805
JBrowse link
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807419|PMID:18582859) Ensembl
Ensembl
MGI
PMID:18582859 GO_REF:0000107 MGI:3807419 NCBI chr 2:219,054,424...219,060,921
Ensembl chr 2:219,054,424...219,060,921
JBrowse link
G KDM2B lysine demethylase 2B involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr12:121,402,288...121,582,268
Ensembl chr12:121,429,096...121,581,023
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413396|PMID:19653321)
(MGI:3823171|PMID:18985738)
MGI PMID:18985738 PMID:19653321 MGI:3823171 MGI:4413396 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807101|PMID:18653562) Ensembl
Ensembl
MGI
PMID:18653562 GO_REF:0000107 MGI:3807101 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G SP1 Sp1 transcription factor acts_upstream_of_or_within ISO (MGI:3717030|PMID:17584888) MGI PMID:17584888 MGI:3717030 NCBI chr12:53,380,176...53,416,446
Ensembl chr12:53,380,176...53,416,446
JBrowse link
G SP3 Sp3 transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3717030|PMID:17584888) Ensembl
Ensembl
MGI
PMID:17584888 GO_REF:0000107 MGI:3717030 NCBI chr 2:173,900,775...173,965,702
Ensembl chr 2:173,880,850...173,965,373
JBrowse link
G TBX2 T-box transcription factor 2 involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:61,399,843...61,409,466
Ensembl chr17:61,399,843...61,409,466
JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:1313057|PMID:9811866) MGI PMID:9811866 MGI:1313057 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659
JBrowse link
G TH tyrosine hydroxylase involved_in ISS
IEA
BHF-UCL
BHF-UCL
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:2,163,929...2,174,081
Ensembl chr11:2,163,929...2,171,815
JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3790562|PMID:18436818) MGI
Ensembl
Ensembl
PMID:18436818 GO_REF:0000107 MGI:3790562 NCBI chr10:31,318,417...31,529,804
Ensembl chr10:31,318,495...31,529,814
JBrowse link
embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (MGI:3608158|PMID:16207763), (MGI:3624188|PMID:16611695) MGI PMID:16207763 PMID:16611695 MGI:3608158 MGI:3624188 NCBI chr 9:72,900,671...72,953,053
Ensembl chr 9:72,900,671...73,080,442
JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3624188|PMID:16611695)
(MGI:3608158|PMID:16207763)
(MGI:3608158|PMID:16207763), (MGI:3624188|PMID:16611695)
UniProt
UniProt
Ensembl
MGI
PMID:16207763 PMID:16611695 GO_REF:0000024 GO_REF:0000107 MGI:3608158 MGI:3624188 NCBI chr15:100,879,831...100,916,626
Ensembl chr15:100,877,714...100,916,626
JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 involved_in IEP (PMID:25406291) UniProt
UniProt
PMID:25406291 NCBI chr 2:55,865,967...55,924,163
Ensembl chr 2:55,865,967...55,924,139
JBrowse link
G FBN1 fibrillin 1 involved_in IEP (PMID:25406291) UniProt
UniProt
PMID:25406291 NCBI chr15:48,408,313...48,645,709
Ensembl chr15:48,408,313...48,645,721
JBrowse link
G FBN2 fibrillin 2 involved_in IEP (PMID:25406291) UniProt
UniProt
PMID:25406291 NCBI chr 5:128,257,909...128,538,245
Ensembl chr 5:128,257,909...128,659,185
JBrowse link
G FOXL2 forkhead box L2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3043431|PMID:15056605) MGI
Ensembl
Ensembl
PMID:15056605 GO_REF:0000107 MGI:3043431 NCBI chr 3:138,944,224...138,947,137
Ensembl chr 3:138,944,224...138,947,137
JBrowse link
G MFAP2 microfibril associated protein 2 involved_in IEP
IBA
(PMID:25406291)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:21873635 PMID:25406291 NCBI chr 1:16,974,502...16,981,583
Ensembl chr 1:16,974,502...16,980,632
JBrowse link
G MFAP5 microfibril associated protein 5 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr12:8,645,943...8,662,826
Ensembl chr12:8,637,346...8,662,888
JBrowse link
G RARB retinoic acid receptor beta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3608158|PMID:16207763) Ensembl
Ensembl
MGI
PMID:16207763 GO_REF:0000107 MGI:3608158 NCBI chr 3:24,829,321...25,597,932
Ensembl chr 3:24,687,887...25,597,932
JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3608158|PMID:16207763) BHF-UCL
Ensembl
BHF-UCL
MGI
PMID:16207763 GO_REF:0000024 GO_REF:0000107 MGI:3608158 NCBI chr12:53,210,569...53,232,231
Ensembl chr12:53,210,567...53,232,980
JBrowse link
G VAX2 ventral anterior homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2157790|PMID:11830579)
(MGI:1349226|PMID:10595508)
Ensembl
Ensembl
InterPro
MGI
InterPro
PMID:10595508 PMID:11830579 GO_REF:0000002 GO_REF:0000107 MGI:1349226 MGI:2157790 NCBI chr 2:70,900,551...70,933,917
Ensembl chr 2:70,900,576...70,965,373
JBrowse link
embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4422144|PMID:19754878) Ensembl
Ensembl
MGI
PMID:19754878 GO_REF:0000107 MGI:4422144 NCBI chr11:125,956,813...126,063,335
Ensembl chr11:125,955,796...126,063,335
JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869
JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr17:36,937,475...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413396|PMID:19653321) MGI PMID:19653321 MGI:4413396 NCBI chr12:12,116,025...12,267,044
Ensembl chr12:12,116,025...12,267,044
JBrowse link
G PROX1 prospero homeobox 1 involved_in
acts_upstream_of_or_within
IEP
IEA
ISO
(PMID:12692551) BHF-UCL
Ensembl
BHF-UCL
BHF-UCL
PMID:12692551 GO_REF:0000107 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G RBP4 retinol binding protein 4 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr10:93,591,694...93,601,744
Ensembl chr10:93,591,687...93,601,744
JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:186,587,789...186,726,696
Ensembl chr 4:186,587,794...186,726,722
JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1S calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO (MGI:3613415|PMID:14618389) MGI PMID:14618389 MGI:3613415 NCBI chr 1:201,039,509...201,112,453
Ensembl chr 1:201,039,512...201,112,451
JBrowse link
G FOXL2 forkhead box L2 involved_in IMP (PMID:12630957) UniProt
UniProt
PMID:12630957 NCBI chr 3:138,944,224...138,947,137
Ensembl chr 3:138,944,224...138,947,137
JBrowse link
G MYH15 myosin heavy chain 15 ISO RGD PMID:19948655 RGD:2317122 NCBI chr 3:108,380,368...108,549,462
Ensembl chr 3:108,380,368...108,529,322
JBrowse link
G MYOM1 myomesin 1 ISO RGD PMID:12878677 RGD:633368 NCBI chr18:3,066,807...3,220,108
Ensembl chr18:3,066,807...3,219,968
JBrowse link
G MYOM2 myomesin 2 ISO RGD PMID:12878677 RGD:633368 NCBI chr 8:2,045,046...2,145,456
Ensembl chr 8:2,045,046...2,165,552
JBrowse link
G PITX2 paired like homeodomain 2 acts_upstream_of_or_within ISO (MGI:4881620|PMID:21035439)
(MGI:3624183|PMID:16638982)
MGI PMID:16638982 PMID:21035439 MGI:3624183 MGI:4881620 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123
JBrowse link
eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL5A1 collagen type V alpha 1 chain involved_in IMP (PMID:16431952) UniProt
UniProt
PMID:16431952 NCBI chr 9:134,641,789...134,844,843
Ensembl chr 9:134,641,803...134,844,843
JBrowse link
G COL5A2 collagen type V alpha 2 chain involved_in IMP (PMID:16431952) UniProt
UniProt
PMID:16431952 NCBI chr 2:189,031,898...189,225,301
Ensembl chr 2:189,031,898...189,225,312
JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (MGI:2138055|PMID:11456441) MGI PMID:11456441 MGI:2138055 NCBI chr 9:86,944,362...86,947,506
Ensembl chr 9:86,944,362...86,947,506
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IMP (PMID:8291537) BHF-UCL
BHF-UCL
PMID:8291537 NCBI chr 5:36,876,769...37,066,413
Ensembl chr 5:36,876,769...37,066,413
JBrowse link
G STAU2 staufen double-stranded RNA binding protein 2 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:22940085 GO_REF:0000107 RGD:10043154 NCBI chr 8:73,420,369...73,747,480
Ensembl chr 8:73,420,369...73,747,708
JBrowse link
eye photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISO (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chr 6:135,283,532...135,497,771
Ensembl chr 6:135,283,407...135,498,434
JBrowse link
G CEP290 centrosomal protein 290 involved_in ISS (PMID:16682973) HGNC-UCL
HGNC-UCL
PMID:16682973 NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099
JBrowse link
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2675211|PMID:12915475)
(MGI:4849309|PMID:21052544)
Ensembl
Ensembl
MGI
PMID:12915475 PMID:21052544 GO_REF:0000107 MGI:2675211 MGI:4849309 NCBI chr 1:197,201,504...197,478,455
Ensembl chr 1:197,268,204...197,478,455
JBrowse link
G DZANK1 double zinc ribbon and ankyrin repeat domains 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr20:18,383,367...18,467,180
Ensembl chr20:18,383,367...18,467,281
JBrowse link
G FSCN2 fascin actin-bundling protein 2, retinal involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3610644|PMID:16043865) Ensembl
Ensembl
MGI
PMID:16043865 GO_REF:0000107 MGI:3610644 NCBI chr17:81,513,019...81,537,130
Ensembl chr17:81,528,377...81,537,130
JBrowse link
G GABRR2 gamma-aminobutyric acid type A receptor subunit rho2 NOT|acts_upstream_of_or_within ISO (MGI:2179933|PMID:12019334) MGI PMID:12019334 MGI:2179933 NCBI chr 6:89,254,464...89,315,299
Ensembl chr 6:89,254,464...89,315,299
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3609280|PMID:16249514) Ensembl
Ensembl
MGI
PMID:16249514 GO_REF:0000107 MGI:3609280 NCBI chr 3:50,191,610...50,197,696
Ensembl chr 3:50,191,610...50,197,696
JBrowse link
G GNGT1 G protein subunit gamma transducin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3778702|PMID:18367617) Ensembl
Ensembl
MGI
PMID:18367617 GO_REF:0000107 MGI:3778702 NCBI chr 7:93,906,567...93,911,265
Ensembl chr 7:93,591,573...93,911,265
JBrowse link
G MFRP membrane frizzled-related protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849309|PMID:21052544) Ensembl
Ensembl
MGI
PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr11:119,338,942...119,346,705
Ensembl chr11:119,338,942...119,346,705
JBrowse link
G MYO7A myosin VIIA involved_in IC (PMID:8842737) UniProt
UniProt
PMID:8842737 NCBI chr11:77,128,192...77,215,241
Ensembl chr11:77,128,246...77,215,241
JBrowse link
G NR2E3 nuclear receptor subfamily 2 group E member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849309|PMID:21052544) Ensembl
Ensembl
MGI
PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr15:71,810,554...71,818,253
Ensembl chr15:71,792,638...71,818,259
JBrowse link
G OLFM3 olfactomedin 3 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:12019210 GO_REF:0000107 RGD:633402 NCBI chr 1:101,800,028...101,996,926
Ensembl chr 1:101,802,560...101,996,926
JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2654287|PMID:12648492) Ensembl
Ensembl
MGI
PMID:12648492 GO_REF:0000107 MGI:2654287 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G PDGFB platelet derived growth factor subunit B acts_upstream_of_or_within ISO (MGI:5607451|PMID:25224828) MGI PMID:25224828 MGI:5607451 NCBI chr22:39,223,359...39,244,982
Ensembl chr22:39,223,359...39,244,982
JBrowse link
G PRDM1 PR/SET domain 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4454584|PMID:20463215) Ensembl
MGI
Ensembl
PMID:20463215 GO_REF:0000107 MGI:4454584 NCBI chr 6:106,046,729...106,109,938
Ensembl chr 6:105,993,463...106,109,939
JBrowse link
G PRKCI protein kinase C iota involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3607414|PMID:16267237) Ensembl
Ensembl
MGI
PMID:16267237 GO_REF:0000107 MGI:3607414 NCBI chr 3:170,222,424...170,305,981
Ensembl chr 3:170,222,424...170,305,977
JBrowse link
G RDH13 retinol dehydrogenase 13 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5462166|PMID:22605914) Ensembl
Ensembl
MGI
PMID:22605914 GO_REF:0000107 MGI:5462166 NCBI chr19:55,040,375...55,069,531
Ensembl chr19:55,039,108...55,071,291
JBrowse link
G RORB RAR related orphan receptor B involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:74,497,335...74,693,177
Ensembl chr 9:74,497,335...74,693,177
JBrowse link
G RPGR retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO (MGI:2654998|PMID:12651948) MGI PMID:12651948 MGI:2654998 NCBI chr  X:38,269,163...38,327,509
Ensembl chr  X:38,269,163...38,327,544
JBrowse link
G RPGRIP1 RPGR interacting protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2654998|PMID:12651948) InterPro
InterPro
Ensembl
MGI
PMID:12651948 GO_REF:0000002 GO_REF:0000107 MGI:2654998 NCBI chr14:21,280,083...21,351,316
Ensembl chr14:21,280,083...21,351,301
JBrowse link
G TH tyrosine hydroxylase involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr11:2,163,929...2,174,081
Ensembl chr11:2,163,929...2,171,815
JBrowse link
G TULP1 TUB like protein 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:35,497,874...35,512,896
Ensembl chr 6:35,497,874...35,512,896
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3607459|PMID:16251428) BHF-UCL
BHF-UCL
MGI
PMID:16251428 GO_REF:0000024 MGI:3607459 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:85,546,539...85,742,029
Ensembl chr 9:85,546,539...85,742,029
JBrowse link
G STAT3 signal transducer and activator of transcription 3 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3045481|PMID:15207851) UniProt
UniProt
Ensembl
MGI
PMID:15207851 GO_REF:0000024 GO_REF:0000107 MGI:3045481 NCBI chr17:42,313,324...42,388,502
Ensembl chr17:42,313,324...42,388,540
JBrowse link
eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (MGI:2680889|PMID:14625556) MGI PMID:14625556 MGI:2680889 NCBI chr14:56,799,905...56,810,479
Ensembl chr14:56,799,905...56,816,693
JBrowse link
eyelid development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EGFR epidermal growth factor receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:85697|PMID:9030684) MGI
Ensembl
Ensembl
PMID:9030684 GO_REF:0000107 MGI:85697 NCBI chr 7:55,019,017...55,211,628
Ensembl chr 7:55,019,017...55,211,628
JBrowse link
G GRHL3 grainyhead like transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4947318|PMID:21262862) Ensembl
Ensembl
MGI
PMID:21262862 GO_REF:0000107 MGI:4947318 NCBI chr 1:24,319,333...24,364,482
Ensembl chr 1:24,199,558...24,364,482
JBrowse link
G HDAC1 histone deacetylase 1 involved_in ISS
IEA
BHF-UCL
Ensembl
BHF-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:32,292,083...32,333,628
Ensembl chr 1:32,292,083...32,333,635
JBrowse link
G HDAC2 histone deacetylase 2 involved_in ISS (PMID:21093383) BHF-UCL
BHF-UCL
PMID:21093383 NCBI chr 6:113,933,028...113,971,148
Ensembl chr 6:113,933,028...114,011,308
JBrowse link
G INHBA inhibin subunit beta A involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:41,685,101...41,710,532
Ensembl chr 7:41,667,168...41,705,834
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5608927|PMID:25224220) MGI
Ensembl
Ensembl
PMID:25224220 GO_REF:0000107 MGI:5608927 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048
JBrowse link
G KMT2C lysine methyltransferase 2C acts_upstream_of_or_within ISO (MGI:3692812|PMID:17021013) MGI PMID:17021013 MGI:3692812 NCBI chr 7:152,134,925...152,436,642
Ensembl chr 7:152,134,922...152,436,644
JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (MGI:5467663|PMID:23201579), (MGI:5608927|PMID:25224220) MGI PMID:23201579 PMID:25224220 MGI:5467663 MGI:5608927 NCBI chr 5:56,815,543...56,896,152
Ensembl chr 5:56,815,549...56,896,152
JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:98,944,442...98,952,100
Ensembl chr 8:98,944,403...98,952,104
JBrowse link
G SOS1 SOS Ras/Rac guanine nucleotide exchange factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:85697|PMID:9030684) Ensembl
Ensembl
MGI
PMID:9030684 GO_REF:0000107 MGI:85697 NCBI chr 2:38,981,549...39,124,868
Ensembl chr 2:38,962,206...39,124,345
JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4421610|PMID:20047077) Ensembl
Ensembl
MGI
PMID:20047077 GO_REF:0000107 MGI:4421610 NCBI chr 6:43,171,269...43,181,506
Ensembl chr 6:43,171,269...43,181,506
JBrowse link
G STRA6 signaling receptor and transporter of retinol STRA6 involved_in IMP (PMID:17273977) DFLAT
DFLAT
PMID:17273977 NCBI chr15:74,179,466...74,212,267
Ensembl chr15:74,179,466...74,212,267
JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in IMP (PMID:17070479) BHF-UCL
BHF-UCL
PMID:17070479 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636
JBrowse link
horizontal cell localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LHX1 LIM homeobox 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:36,937,475...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
hyaloid vascular plexus regression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DRD2 dopamine receptor D2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:113,409,605...113,475,398
Ensembl chr11:113,409,605...113,475,691
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr13:28,300,346...28,495,128
Ensembl chr13:28,300,346...28,495,145
JBrowse link
G NINJ1 ninjurin 1 acts_upstream_of_or_within ISO (MGI:4940188|PMID:19557008) MGI PMID:19557008 MGI:4940188 NCBI chr 9:93,121,496...93,134,304
Ensembl chr 9:93,121,496...93,134,251
JBrowse link
G OPN4 opsin 4 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr10:86,653,495...86,666,460
Ensembl chr10:86,654,518...86,666,460
JBrowse link
G OPN5 opsin 5 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:47,782,032...47,831,088
Ensembl chr 6:47,781,982...47,832,780
JBrowse link
G SLC17A6 solute carrier family 17 member 6 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr11:22,338,381...22,379,503
Ensembl chr11:22,338,381...22,379,503
JBrowse link
G SLC6A3 solute carrier family 6 member 3 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:1,392,794...1,445,440
Ensembl chr 5:1,392,794...1,445,440
JBrowse link
G TH tyrosine hydroxylase involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:2,163,929...2,174,081
Ensembl chr11:2,163,929...2,171,815
JBrowse link
iris morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in ISS
IEA
(PMID:17064680) UniProt
Ensembl
UniProt
PMID:17064680 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5429122|PMID:22627278) Ensembl
Ensembl
MGI
PMID:22627278 GO_REF:0000107 MGI:5429122 NCBI chr14:61,695,513...61,748,258
Ensembl chr14:61,695,513...61,748,259
JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869
JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998
JBrowse link
G PAX6 paired box 6 involved_in IMP (PMID:7550230) DFLAT
DFLAT
PMID:7550230 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G PITX2 paired like homeodomain 2 involved_in IMP (PMID:9437321) BHF-UCL
BHF-UCL
PMID:9437321 NCBI chr 4:110,617,423...110,642,123
Ensembl chr 4:110,617,423...110,642,123
JBrowse link
G VHL von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (MGI:5429122|PMID:22627278) MGI PMID:22627278 MGI:5429122 NCBI chr 3:10,141,778...10,153,667
Ensembl chr 3:10,141,778...10,153,667
JBrowse link
G WNT2 Wnt family member 2 involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 7:117,275,451...117,323,058
Ensembl chr 7:117,275,451...117,323,152
JBrowse link
G WNT2B Wnt family member 2B involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165
JBrowse link
G WNT9A Wnt family member 9A involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 1:227,918,656...227,947,932
Ensembl chr 1:227,918,656...227,947,932
JBrowse link
lens development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BIRC7 baculoviral IAP repeat containing 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5766584|PMID:26218911) Ensembl
Ensembl
MGI
PMID:26218911 GO_REF:0000107 MGI:5766584 NCBI chr20:63,235,905...63,240,495
Ensembl chr20:63,235,883...63,240,495
JBrowse link
G CASP6 caspase 6 ISO RGD PMID:15161922 RGD:2301319 NCBI chr 4:109,688,628...109,703,445
Ensembl chr 4:109,688,622...109,703,583
JBrowse link
G CDK2 cyclin dependent kinase 2 ISO RGD PMID:10620399 RGD:724665 NCBI chr12:55,966,830...55,972,789
Ensembl chr12:55,966,781...55,972,789
JBrowse link
G CDK4 cyclin dependent kinase 4 ISO RGD PMID:10620399 RGD:724665 NCBI chr12:57,747,727...57,752,310
Ensembl chr12:57,747,727...57,756,013
JBrowse link
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4422144|PMID:19754878) Ensembl
Ensembl
MGI
PMID:19754878 GO_REF:0000107 MGI:4422144 NCBI chr11:125,956,813...126,063,335
Ensembl chr11:125,955,796...126,063,335
JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (MGI:2154010|PMID:11687536)
(MGI:3617146|PMID:16439475)
(MGI:3617146|PMID:16439475), (MGI:85598|PMID:9023351)
RGD
MGI
PMID:8187157 PMID:9023351 PMID:11687536 PMID:16439475 MGI:2154010 MGI:3617146 MGI:85598 RGD:1600991 NCBI chr21:43,169,008...43,172,810
Ensembl chr21:43,169,008...43,172,805
JBrowse link
G CRYAB crystallin alpha B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3617146|PMID:16439475) Ensembl
Ensembl
MGI
PMID:16439475 GO_REF:0000107 MGI:3617146 NCBI chr11:111,908,564...111,923,740
Ensembl chr11:111,908,564...111,923,722
JBrowse link
G CRYBA1 crystallin beta A1 involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
GO_Central
Ensembl
RGD
PMID:2753045 PMID:21873635 GO_REF:0000107 RGD:1298814 NCBI chr17:29,246,859...29,254,494
Ensembl chr17:29,246,859...29,254,494
JBrowse link
G CRYBA2 crystallin beta A2 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:4950336|PMID:21212184)
GO_Central
GO_Central
Ensembl
MGI
PMID:21212184 PMID:21873635 GO_REF:0000107 MGI:4950336 NCBI chr 2:218,990,190...218,993,422
Ensembl chr 2:218,990,189...218,993,422
JBrowse link
G CRYBA4 crystallin beta A4 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr22:26,607,982...26,630,672
Ensembl chr22:26,621,963...26,630,669
JBrowse link
G CRYBB1 crystallin beta B1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr22:26,599,278...26,618,104
Ensembl chr22:26,599,278...26,618,027
JBrowse link
G CRYBB2 crystallin beta B2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr22:25,211,660...25,231,869
Ensembl chr22:25,212,564...25,231,870
JBrowse link
G CRYBB3 crystallin beta B3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr22:25,194,244...25,207,617
Ensembl chr22:25,199,858...25,207,359
JBrowse link
G CRYBG3 crystallin beta-gamma domain containing 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 3:97,821,693...97,944,984
Ensembl chr 3:97,822,011...97,944,984
JBrowse link
G CRYGA crystallin gamma A involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:65639|PMID:8034315), (MGI:71783|PMID:7088001)
(MGI:1333159|PMID:6510713), (MGI:69851|PMID:6877261)
GO_Central
MGI
GO_Central
Ensembl
RGD
PMID:2338125 PMID:6510713 PMID:6877261 PMID:7088001 PMID:8034315 More... GO_REF:0000107 MGI:1333159 MGI:65639 MGI:69851 MGI:71783 RGD:2303725 NCBI chr 2:208,160,740...208,163,589
Ensembl chr 2:208,160,740...208,163,589
JBrowse link
G CRYGB crystallin gamma B involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3776178|PMID:18172107)
(MGI:3691890|PMID:12426373), (MGI:81294|PMID:8626090)
GO_Central
GO_Central
Ensembl
MGI
RGD
PMID:2338125 PMID:8626090 PMID:12426373 PMID:18172107 PMID:21873635 GO_REF:0000107 MGI:3691890 MGI:3776178 MGI:81294 RGD:2303725 NCBI chr 2:208,142,573...208,146,327
Ensembl chr 2:208,142,573...208,146,158
JBrowse link
G CRYGC crystallin gamma C involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:2338125 PMID:21873635 RGD:2303725 NCBI chr 2:208,128,137...208,139,100
Ensembl chr 2:208,128,137...208,129,828
JBrowse link
G CRYGD crystallin gamma D involved_in
acts_upstream_of_or_within
ISS
IBA
ISO
(PMID:21873635)
(MGI:3762268|PMID:17652744)
(MGI:1354024|PMID:10704279)
UniProt
GO_Central
UniProt
MGI
RGD
GO_Central
PMID:2338125 PMID:10704279 PMID:17652744 PMID:21873635 GO_REF:0000024 MGI:1354024 MGI:3762268 RGD:2303725 NCBI chr 2:208,121,607...208,124,524
Ensembl chr 2:208,121,607...208,124,524
JBrowse link
G CRYGN crystallin gamma N involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 7:151,428,832...151,448,790
Ensembl chr 7:151,428,832...151,440,813
JBrowse link
G CRYGS crystallin gamma S involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:65639|PMID:8034315), (MGI:69851|PMID:6877261)
GO_Central
Ensembl
GO_Central
MGI
PMID:6877261 PMID:8034315 PMID:21873635 GO_REF:0000107 MGI:65639 MGI:69851 NCBI chr 3:186,538,443...186,544,380
Ensembl chr 3:186,538,441...186,546,702
JBrowse link
G CTNS cystinosin, lysosomal cystine transporter involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5302597|PMID:21897743) Ensembl
Ensembl
MGI
PMID:21897743 GO_REF:0000107 MGI:5302597 NCBI chr17:3,636,459...3,663,103
Ensembl chr17:3,636,459...3,663,103
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2682188|PMID:14645510) Ensembl
Ensembl
MGI
PMID:14645510 GO_REF:0000107 MGI:2682188 NCBI chr 3:197,042,560...197,299,321
Ensembl chr 3:197,042,560...197,299,330
JBrowse link
G FAT1 FAT atypical cadherin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:186,587,789...186,726,696
Ensembl chr 4:186,587,794...186,726,722
JBrowse link
G FOXE3 forkhead box E3 involved_in ISS
IMP
IEA
(PMID:17064680)
(PMID:27218149)
UniProt
UniProt
Ensembl
PMID:17064680 PMID:27218149 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052
JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5447585|PMID:23136392) MGI
Ensembl
PMID:23136392 GO_REF:0000107 MGI:5447585 NCBI chr12:69,470,371...69,579,793
Ensembl chr12:69,470,349...69,579,793
JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4354418|PMID:19623612) Ensembl
Ensembl
MGI
PMID:19623612 GO_REF:0000107 MGI:4354418 NCBI chr10:8,045,420...8,075,198
Ensembl chr10:8,045,378...8,075,198
JBrowse link
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1267300|PMID:9620080) MGI
Ensembl
Ensembl
PMID:9620080 GO_REF:0000107 MGI:1267300 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G GJA8 gap junction protein alpha 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69851|PMID:6877261) Ensembl
Ensembl
MGI
PMID:6877261 GO_REF:0000107 MGI:69851 NCBI chr 1:147,902,795...147,915,287
Ensembl chr 1:147,902,795...147,909,269
JBrowse link
G GJE1 gap junction protein epsilon 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3795311|PMID:18385072) Ensembl
Ensembl
MGI
PMID:18385072 GO_REF:0000107 MGI:3795311 NCBI chr 6:142,132,925...142,135,358
Ensembl chr 6:142,133,090...142,135,151
JBrowse link
G LIM2 lens intrinsic membrane protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1333159|PMID:6510713), (MGI:69851|PMID:6877261), (MGI:71783|PMID:7088001), (MGI:82332|PMID:8812411) Ensembl
Ensembl
MGI
PMID:6510713 PMID:6877261 PMID:7088001 PMID:8812411 GO_REF:0000107 MGI:1333159 MGI:69851 MGI:71783 MGI:82332 NCBI chr19:51,379,909...51,387,974
Ensembl chr19:51,379,909...51,387,974
JBrowse link
G MAF MAF bZIP transcription factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3760711|PMID:12835653)
(MGI:1350584|PMID:10603348)
(MGI:1340085|PMID:10383433)
MGI
Ensembl
PMID:10383433 PMID:10603348 PMID:12835653 GO_REF:0000107 MGI:1340085 MGI:1350584 MGI:3760711 NCBI chr16:79,202,624...79,601,952
Ensembl chr16:79,585,843...79,600,737
JBrowse link
G MED1 mediator complex subunit 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr17:39,404,285...39,451,281
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G MIP major intrinsic protein of lens fiber acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:55175|PMID:7333462) MGI
Ensembl
Ensembl
PMID:7333462 GO_REF:0000107 MGI:55175 NCBI chr12:56,449,502...56,456,553
Ensembl chr12:56,449,502...56,469,166
JBrowse link
G NHS NHS actin remodeling regulator involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:64544|PMID:8282045)
GO_Central
GO_Central
Ensembl
MGI
PMID:8282045 PMID:21873635 GO_REF:0000107 MGI:64544 NCBI chr  X:17,375,200...17,735,994
Ensembl chr  X:17,375,200...17,735,994
JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69851|PMID:6877261) Ensembl
Ensembl
MGI
PMID:6877261 GO_REF:0000107 MGI:69851 NCBI chr11:31,789,026...31,817,961
Ensembl chr11:31,784,779...31,817,961
JBrowse link
G PDS5A PDS5 cohesin associated factor A acts_upstream_of_or_within ISO (MGI:3847057|PMID:19412548) MGI PMID:19412548 MGI:3847057 NCBI chr 4:39,822,863...39,977,911
Ensembl chr 4:39,822,863...39,977,956
JBrowse link
G PDS5B PDS5 cohesin associated factor B acts_upstream_of_or_within ISO (MGI:3847057|PMID:19412548) MGI PMID:19412548 MGI:3847057 NCBI chr13:32,586,432...32,778,019
Ensembl chr13:32,586,452...32,778,019
JBrowse link
G PITX3 paired like homeodomain 3 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:102,230,189...102,241,512
Ensembl chr10:102,230,186...102,241,512
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEP (PMID:8812486) BHF-UCL
BHF-UCL
PMID:8812486 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G PYGO2 pygopus family PHD finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3712628|PMID:17425782) Ensembl
Ensembl
MGI
PMID:17425782 GO_REF:0000107 MGI:3712628 NCBI chr 1:154,957,026...154,961,782
Ensembl chr 1:154,957,026...154,963,853
JBrowse link
G SIX3 SIX homeobox 3 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071
JBrowse link
G SIX5 SIX homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1855731|PMID:10802667)
(MGI:1855730|PMID:10802668)
Ensembl
Ensembl
MGI
PMID:10802667 PMID:10802668 GO_REF:0000107 MGI:1855730 MGI:1855731 NCBI chr19:45,764,785...45,769,252
Ensembl chr19:45,764,785...45,769,252
JBrowse link
G SLITRK6 SLIT and NTRK like family member 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5513052|PMID:23543054) Ensembl
Ensembl
MGI
PMID:23543054 GO_REF:0000107 MGI:5513052 NCBI chr13:85,792,790...85,799,419
Ensembl chr13:85,792,790...85,806,683
JBrowse link
G TBC1D20 TBC1 domain family member 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5551670|PMID:24239381) MGI
Ensembl
PMID:24239381 GO_REF:0000107 MGI:5551670 NCBI chr20:435,480...462,543
Ensembl chr20:423,596...462,566
JBrowse link
G TBC1D32 TBC1 domain family member 32 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4439200|PMID:20159594) Ensembl
Ensembl
MGI
PMID:20159594 GO_REF:0000107 MGI:4439200 NCBI chr 6:121,079,494...121,335,384
Ensembl chr 6:121,079,494...121,334,745
JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2151112|PMID:11641223) Ensembl
Ensembl
MGI
PMID:11641223 GO_REF:0000107 MGI:2151112 NCBI chr 9:99,104,038...99,154,192
Ensembl chr 9:99,104,038...99,154,192
JBrowse link
G TGFBR2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2151112|PMID:11641223) Ensembl
Ensembl
MGI
PMID:11641223 GO_REF:0000107 MGI:2151112 NCBI chr 3:30,606,472...30,694,142
Ensembl chr 3:30,606,601...30,694,142
JBrowse link
G UNC45B unc-45 myosin chaperone B involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr17:35,147,793...35,189,345
Ensembl chr17:35,147,817...35,189,345
JBrowse link
G WNT2 Wnt family member 2 involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 7:117,275,451...117,323,058
Ensembl chr 7:117,275,451...117,323,152
JBrowse link
G WNT2B Wnt family member 2B involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165
JBrowse link
G WNT5A Wnt family member 5A involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 3:55,465,715...55,505,261
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
lens fiber cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BFSP1 beaded filament structural protein 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:2673300|PMID:15037121)
GO_Central
GO_Central
Ensembl
MGI
PMID:15037121 PMID:21873635 GO_REF:0000107 MGI:2673300 NCBI chr20:17,493,905...17,569,220
Ensembl chr20:17,493,905...17,569,220
JBrowse link
G BFSP2 beaded filament structural protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2673300|PMID:15037121), (MGI:3717045|PMID:17065509) Ensembl
Ensembl
MGI
PMID:15037121 PMID:17065509 GO_REF:0000107 MGI:2673300 MGI:3717045 NCBI chr 3:133,397,882...133,475,208
Ensembl chr 3:133,400,056...133,475,222
JBrowse link
G CRYGB crystallin gamma B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3776178|PMID:18172107) MGI
Ensembl
PMID:18172107 GO_REF:0000107 MGI:3776178 NCBI chr 2:208,142,573...208,146,327
Ensembl chr 2:208,142,573...208,146,158
JBrowse link
G FGFR2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO (MGI:5447585|PMID:23136392)
(MGI:3796810|PMID:18455718)
MGI PMID:18455718 PMID:23136392 MGI:3796810 MGI:5447585 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (MGI:3796810|PMID:18455718) MGI PMID:18455718 MGI:3796810 NCBI chr 4:1,793,293...1,808,872
Ensembl chr 4:1,793,293...1,808,872
JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5447585|PMID:23136392) Ensembl
Ensembl
MGI
PMID:23136392 GO_REF:0000107 MGI:5447585 NCBI chr12:69,470,371...69,579,793
Ensembl chr12:69,470,349...69,579,793
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:4888440|PMID:21118511) MGI PMID:21118511 MGI:4888440 NCBI chr19:10,960,999...11,062,277
Ensembl chr19:10,960,932...11,079,426
JBrowse link
G TMOD1 tropomodulin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:97,501,180...97,601,743
Ensembl chr 9:97,501,180...97,601,743
JBrowse link
G VIM vimentin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2673300|PMID:15037121) Ensembl
Ensembl
MGI
PMID:15037121 GO_REF:0000107 MGI:2673300 NCBI chr10:17,228,241...17,237,593
Ensembl chr10:17,228,241...17,237,593
JBrowse link
G WNT5B Wnt family member 5B involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr12:1,529,856...1,647,213
Ensembl chr12:1,529,891...1,647,212
JBrowse link
G WNT7A Wnt family member 7A involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 3:13,816,258...13,880,071
Ensembl chr 3:13,816,258...13,880,071
JBrowse link
G WNT7B Wnt family member 7B involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr22:45,920,362...45,977,162
Ensembl chr22:45,920,366...45,977,162
JBrowse link
lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRYGD crystallin gamma D involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3762268|PMID:17652744) UniProt
UniProt
MGI
RGD
PMID:8575616 PMID:17652744 GO_REF:0000024 MGI:3762268 RGD:1601018 NCBI chr 2:208,121,607...208,124,524
Ensembl chr 2:208,121,607...208,124,524
JBrowse link
G FZR1 fizzy and cell division cycle 20 related 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3720408|PMID:17215516) Ensembl
Ensembl
MGI
PMID:17215516 GO_REF:0000107 MGI:3720408 NCBI chr19:3,506,263...3,538,334
Ensembl chr19:3,506,311...3,538,334
JBrowse link
G HSF4 heat shock transcription factor 4 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr16:67,163,761...67,169,941
Ensembl chr16:67,164,681...67,169,945
JBrowse link
G KDM5B lysine demethylase 5B involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:24142921 GO_REF:0000107 RGD:9587771 NCBI chr 1:202,724,495...202,809,470
Ensembl chr 1:202,724,495...202,808,487
JBrowse link
G MAF MAF bZIP transcription factor involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:1340085|PMID:10383433)
(MGI:3760711|PMID:12835653)
GO_Central
Ensembl
GO_Central
MGI
PMID:10383433 PMID:12835653 PMID:21873635 GO_REF:0000107 MGI:1340085 MGI:3760711 NCBI chr16:79,202,624...79,601,952
Ensembl chr16:79,585,843...79,600,737
JBrowse link
G NF2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr22:29,603,556...29,698,600
Ensembl chr22:29,603,556...29,698,598
JBrowse link
G NTRK3 neurotrophic receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (MGI:5447585|PMID:23136392) MGI PMID:23136392 MGI:5447585 NCBI chr15:87,859,749...88,256,796
Ensembl chr15:87,859,751...88,256,768
JBrowse link
G PITX3 paired like homeodomain 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:102,230,189...102,241,512
Ensembl chr10:102,230,186...102,241,512
JBrowse link
G PLAAT1 phospholipase A and acyltransferase 1 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 3:193,241,128...193,281,639
Ensembl chr 3:193,241,128...193,277,738
JBrowse link
G PLAAT3 phospholipase A and acyltransferase 3 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr11:63,574,462...63,616,926
Ensembl chr11:63,573,195...63,616,883
JBrowse link
G SIX3 SIX homeobox 3 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071
JBrowse link
G SKIL SKI like proto-oncogene involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3720408|PMID:17215516) Ensembl
Ensembl
MGI
PMID:17215516 GO_REF:0000107 MGI:3720408 NCBI chr 3:170,357,678...170,396,849
Ensembl chr 3:170,357,678...170,396,835
JBrowse link
G SLC7A11 solute carrier family 7 member 11 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:16043861 GO_REF:0000107 RGD:2315033 NCBI chr 4:138,164,097...138,242,349
Ensembl chr 4:138,164,097...138,242,349
JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3720408|PMID:17215516) Ensembl
Ensembl
MGI
PMID:17215516 GO_REF:0000107 MGI:3720408 NCBI chr15:67,065,602...67,195,195
Ensembl chr15:67,063,763...67,195,173
JBrowse link
G TDRD7 tudor domain containing 7 involved_in IMP
IBA
(PMID:21436445)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:21436445 PMID:21873635 NCBI chr 9:97,412,096...97,496,125
Ensembl chr 9:97,412,096...97,496,125
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3720408|PMID:17215516) Ensembl
Ensembl
MGI
PMID:17215516 GO_REF:0000107 MGI:3720408 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
lens fiber cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI2 abl interactor 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:203,325,013...203,432,169
Ensembl chr 2:203,328,280...203,447,728
JBrowse link
G ATF4 activating transcription factor 4 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr22:39,514,494...39,522,686
Ensembl chr22:39,519,695...39,522,683
JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (MGI:3655912|PMID:16799046)
(MGI:3775669|PMID:18056999)
MGI PMID:16799046 PMID:18056999 MGI:3655912 MGI:3775669 NCBI chr21:43,169,008...43,172,810
Ensembl chr21:43,169,008...43,172,805
JBrowse link
G CRYGB crystallin gamma B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3691890|PMID:12426373), (MGI:81294|PMID:8626090) Ensembl
Ensembl
MGI
PMID:8626090 PMID:12426373 GO_REF:0000107 MGI:3691890 MGI:81294 NCBI chr 2:208,142,573...208,146,327
Ensembl chr 2:208,142,573...208,146,158
JBrowse link
G EPHA2 EPH receptor A2 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:16,124,337...16,156,104
Ensembl chr 1:16,124,337...16,156,069
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEP
IEA
(PMID:11850194) BHF-UCL
BHF-UCL
Ensembl
PMID:11850194 GO_REF:0000107 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G TBC1D20 TBC1 domain family member 20 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5551670|PMID:24239381) MGI
Ensembl
Ensembl
PMID:24239381 GO_REF:0000107 MGI:5551670 NCBI chr20:435,480...462,543
Ensembl chr20:423,596...462,566
JBrowse link
lens induction in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1316914|PMID:9851982) Ensembl
Ensembl
MGI
PMID:9851982 GO_REF:0000107 MGI:1316914 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:113,929,324...113,977,869
Ensembl chr 1:113,929,324...113,977,869
JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998
JBrowse link
G POU2F1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO (MGI:3701404|PMID:17140559) MGI PMID:17140559 MGI:3701404 NCBI chr 1:167,220,878...167,427,345
Ensembl chr 1:167,220,876...167,427,345
JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (MGI:3692850|PMID:17066077) MGI PMID:17066077 MGI:3692850 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071
JBrowse link
G SOX2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (MGI:3701404|PMID:17140559) MGI PMID:17140559 MGI:3701404 NCBI chr 3:181,711,925...181,714,436
Ensembl chr 3:181,711,925...181,714,436
JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:1347707|PMID:10571739) MGI PMID:10571739 MGI:1347707 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659
JBrowse link
lens morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAR3 BCAR3 adaptor protein, NSP family member involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4358852|PMID:19365570) Ensembl
Ensembl
MGI
PMID:19365570 GO_REF:0000107 MGI:4358852 NCBI chr 1:93,561,741...93,847,219
Ensembl chr 1:93,561,741...93,847,150
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807101|PMID:18653562) Ensembl
Ensembl
MGI
PMID:18653562 GO_REF:0000107 MGI:3807101 NCBI chr 6:139,371,807...139,374,648
Ensembl chr 6:139,371,807...139,374,648
JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (MGI:3655912|PMID:16799046)
(MGI:82388|PMID:8812430)
MGI PMID:8812430 PMID:16799046 MGI:3655912 MGI:82388 NCBI chr21:43,169,008...43,172,810
Ensembl chr21:43,169,008...43,172,805
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603687|PMID:16102745) Ensembl
Ensembl
MGI
PMID:16102745 GO_REF:0000107 MGI:3603687 NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (MGI:1933072|PMID:11290300) MGI PMID:11290300 MGI:1933072 NCBI chr 4:1,793,293...1,808,872
Ensembl chr 4:1,793,293...1,808,872
JBrowse link
G LCTL lactase like involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:66,547,532...66,565,998
Ensembl chr15:66,547,179...66,565,979
JBrowse link
G MEIS1 Meis homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3028436|PMID:14713950) Ensembl
Ensembl
MGI
PMID:14713950 GO_REF:0000107 MGI:3028436 NCBI chr 2:66,435,125...66,573,869
Ensembl chr 2:66,433,452...66,573,869
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3604842|PMID:15728677) Ensembl
Ensembl
MGI
PMID:15728677 GO_REF:0000107 MGI:3604842 NCBI chr11:119,638,098...119,729,200
Ensembl chr11:119,623,408...119,729,200
JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3604842|PMID:15728677) Ensembl
Ensembl
MGI
PMID:15728677 GO_REF:0000107 MGI:3604842 NCBI chr 3:111,071,764...111,201,444
Ensembl chr 3:111,070,071...111,275,563
JBrowse link
G PITX3 paired like homeodomain 3 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:102,230,189...102,241,512
Ensembl chr10:102,230,186...102,241,512
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G SHROOM2 shroom family member 2 involved_in ISS HGNC-UCL
HGNC-UCL
GO_REF:0000024 NCBI chr  X:9,786,406...9,949,443
Ensembl chr  X:9,786,429...9,949,443
JBrowse link
G SKI SKI proto-oncogene involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3693412|PMID:17003410) BHF-UCL
BHF-UCL
MGI
PMID:17003410 GO_REF:0000024 MGI:3693412 NCBI chr 1:2,228,319...2,310,213
Ensembl chr 1:2,228,319...2,310,213
JBrowse link
G SOX1 SRY-box transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1201714|PMID:9512512) Ensembl
Ensembl
MGI
PMID:9512512 GO_REF:0000107 MGI:1201714 NCBI chr13:112,067,149...112,071,706
Ensembl chr13:112,067,149...112,071,706
JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385
JBrowse link
G TDRD7 tudor domain containing 7 involved_in IMP
IBA
(PMID:21436445)
(PMID:21873635)
UniProt
GO_Central
UniProt
GO_Central
PMID:21436445 PMID:21873635 NCBI chr 9:97,412,096...97,496,125
Ensembl chr 9:97,412,096...97,496,125
JBrowse link
G TFAP2A transcription factor AP-2 alpha acts_upstream_of_or_within ISO (MGI:1329246|PMID:9918694), (MGI:3774683|PMID:18224708) MGI PMID:9918694 PMID:18224708 MGI:1329246 MGI:3774683 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659
JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3513737|PMID:15569927) Ensembl
Ensembl
MGI
PMID:15569927 GO_REF:0000107 MGI:3513737 NCBI chr12:69,470,371...69,579,793
Ensembl chr12:69,470,349...69,579,793
JBrowse link
G PROX1 prospero homeobox 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(PMID:11850194) BHF-UCL
Ensembl
BHF-UCL
BHF-UCL
PMID:11850194 GO_REF:0000107 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
negative regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chr 1:10,636,604...10,796,650
Ensembl chr 1:10,636,604...10,796,650
JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:146,638,893...146,642,474
Ensembl chr 4:146,638,893...146,642,474
JBrowse link
negative regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in ISS
IEA
(PMID:16199865) UniProt
Ensembl
UniProt
PMID:16199865 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052
JBrowse link
G SPRED1 sprouty related EVH1 domain containing 1 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:38,252,087...38,357,249
Ensembl chr15:38,252,836...38,357,249
JBrowse link
G SPRED2 sprouty related EVH1 domain containing 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:65,307,425...65,432,599
Ensembl chr 2:65,310,851...65,432,637
JBrowse link
G SPRED3 sprouty related EVH1 domain containing 3 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr19:38,388,697...38,399,587
Ensembl chr19:38,388,421...38,399,587
JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:123,396,795...123,403,760
Ensembl chr 4:123,396,795...123,403,760
JBrowse link
G SPRY2 sprouty RTK signaling antagonist 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr13:80,335,976...80,341,126
Ensembl chr13:80,335,976...80,341,126
JBrowse link
negative regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1336407|PMID:10321489) Ensembl
Ensembl
MGI
PMID:10321489 GO_REF:0000107 MGI:1336407 NCBI chr18:63,123,346...63,320,280
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G BHLHE23 basic helix-loop-helix family member e23 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3054140|PMID:15363390) Ensembl
Ensembl
MGI
PMID:15363390 GO_REF:0000107 MGI:3054140 NCBI chr20:63,005,927...63,006,964
Ensembl chr20:63,005,927...63,007,035
JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASZ1 castor zinc finger 1 acts_upstream_of_or_within ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chr 1:10,636,604...10,796,650
Ensembl chr 1:10,636,604...10,796,650
JBrowse link
negative regulation of vasculature development involved in avascular cornea development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPTL7 angiopoietin like 7 involved_in IMP (PMID:25622036) UniProt
UniProt
PMID:25622036 NCBI chr 1:11,189,324...11,195,981
Ensembl chr 1:11,189,355...11,195,981
JBrowse link
neural retina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTL6A actin like 6A involved_in IEP (PMID:18816825) BHF-UCL
BHF-UCL
PMID:18816825 NCBI chr 3:179,562,926...179,588,407
Ensembl chr 3:179,562,886...179,588,407
JBrowse link
G ATOH7 atonal bHLH transcription factor 7 acts_upstream_of_or_within
involved_in
IMP
IEA
(PMID:21441919) MGI
Ensembl
MGI
InterPro
PMID:21441919 GO_REF:0000002 GO_REF:0000107 NCBI chr10:68,230,595...68,232,113
Ensembl chr10:68,230,595...68,232,113
JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:16079002 GO_REF:0000107 RGD:2317729 NCBI chr12:89,588,049...89,709,366
Ensembl chr12:89,588,049...89,709,300
JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:16079002 GO_REF:0000107 RGD:2317729 NCBI chr 3:10,324,023...10,707,962
Ensembl chr 3:10,324,023...10,708,007
JBrowse link
G ATP2B3 ATPase plasma membrane Ca2+ transporting 3 ISO RGD PMID:16079002 RGD:2317729 NCBI chr  X:153,517,642...153,582,929
Ensembl chr  X:153,517,642...153,582,939
JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:16079002 GO_REF:0000107 RGD:2317729 NCBI chr 1:203,626,832...203,744,081
Ensembl chr 1:203,626,787...203,744,081
JBrowse link
G BSG basigin (Ok blood group) involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr19:571,283...583,493
Ensembl chr19:571,277...583,494
JBrowse link
G CASP2 caspase 2 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:9809666 GO_REF:0000107 RGD:4107085 NCBI chr 7:143,288,351...143,307,696
Ensembl chr 7:143,288,215...143,307,696
JBrowse link
G GPM6A glycoprotein M6A involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 4:175,632,937...176,002,691
Ensembl chr 4:175,632,934...176,002,664
JBrowse link
G OPTN optineurin ISO RGD PMID:17687037 RGD:7800681 NCBI chr10:13,100,082...13,138,308
Ensembl chr10:13,099,449...13,138,308
JBrowse link
G PSEN1 presenilin 1 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:12401445 GO_REF:0000107 RGD:729595 NCBI chr14:73,136,436...73,223,691
Ensembl chr14:73,136,418...73,223,691
JBrowse link
G RAB11FIP4 RAB11 family interacting protein 4 acts_upstream_of_or_within ISO (MGI:3694624|PMID:17089410) MGI PMID:17089410 MGI:3694624 NCBI chr17:31,391,675...31,538,211
Ensembl chr17:31,391,675...31,538,211
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:2631392 GO_REF:0000107 RGD:9585660 NCBI chr 1:68,428,822...68,450,322
Ensembl chr 1:68,428,822...68,449,954
JBrowse link
G SLC17A6 solute carrier family 17 member 6 ISO RGD PMID:18482716 RGD:9999162 NCBI chr11:22,338,381...22,379,503
Ensembl chr11:22,338,381...22,379,503
JBrowse link
G SLC17A7 solute carrier family 17 member 7 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:18482716 GO_REF:0000107 RGD:9999162 NCBI chr19:49,429,401...49,441,527
Ensembl chr19:49,429,401...49,442,360
JBrowse link
G SLC17A8 solute carrier family 17 member 8 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:18482716 GO_REF:0000107 RGD:9999162 NCBI chr12:100,357,074...100,422,055
Ensembl chr12:100,357,074...100,422,055
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in IEP (PMID:18816825) BHF-UCL
BHF-UCL
PMID:18816825 NCBI chr19:10,960,999...11,062,277
Ensembl chr19:10,960,932...11,079,426
JBrowse link
G SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in
acts_upstream_of_or_within
IEP
IEA
ISO
(PMID:18816825) BHF-UCL
Ensembl
BHF-UCL
BHF-UCL
PMID:18816825 GO_REF:0000107 NCBI chr 7:151,238,780...151,277,452
Ensembl chr 7:151,238,764...151,277,896
JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISS BHF-UCL
BHF-UCL
GO_REF:0000024 NCBI chr 1:218,345,336...218,444,619
Ensembl chr 1:218,345,336...218,444,619
JBrowse link
G USP45 ubiquitin specific peptidase 45 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:99,432,325...99,515,770
Ensembl chr 6:99,432,325...99,521,728
JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID1A AT-rich interaction domain 1A acts_upstream_of_or_within ISO (MGI:5466629|PMID:23129809) MGI PMID:23129809 MGI:5466629 NCBI chr 1:26,696,015...26,782,104
Ensembl chr 1:26,693,236...26,782,104
JBrowse link
G WNT16 Wnt family member 16 involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 7:121,325,367...121,341,104
Ensembl chr 7:121,325,367...121,341,104
JBrowse link
G WNT5A Wnt family member 5A involved_in ISS (PMID:16258938) BHF-UCL
BHF-UCL
PMID:16258938 NCBI chr 3:55,465,715...55,505,261
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (MGI:3624188|PMID:16611695) MGI PMID:16611695 MGI:3624188 NCBI chr 9:72,900,671...72,953,053
Ensembl chr 9:72,900,671...73,080,442
JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3624188|PMID:16611695) Ensembl
Ensembl
MGI
PMID:16611695 GO_REF:0000107 MGI:3624188 NCBI chr15:100,879,831...100,916,626
Ensembl chr15:100,877,714...100,916,626
JBrowse link
G PAX2 paired box 2 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944
JBrowse link
optic cup structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659
JBrowse link
optic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIX3 SIX homeobox 3 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071
JBrowse link
G TFAP2A transcription factor AP-2 alpha involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:10,396,677...10,419,659
Ensembl chr 6:10,393,186...10,419,659
JBrowse link
positive regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX1 distal-less homeobox 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:172,085,507...172,089,674
Ensembl chr 2:172,084,740...172,089,677
JBrowse link
G DLX2 distal-less homeobox 2 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:172,099,438...172,102,900
Ensembl chr 2:172,099,438...172,102,900
JBrowse link
positive regulation of lens epithelial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXE3 forkhead box E3 involved_in IMP
ISS
IEA
(PMID:22527307)
(PMID:16199865)
UniProt
UniProt
Ensembl
PMID:16199865 PMID:22527307 GO_REF:0000107 NCBI chr 1:47,416,285...47,418,052
Ensembl chr 1:47,416,285...47,418,052
JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:5,692,384...5,701,385
Ensembl chr 2:5,692,384...5,701,385
JBrowse link
positive regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF2 fibroblast growth factor 2 involved_in IDA (PMID:29501879) UniProt
UniProt
PMID:29501879 NCBI chr 4:122,826,708...122,898,236
Ensembl chr 4:122,826,708...122,898,236
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 involved_in ISO (MGI:3604916|PMID:16162653) UniProt PMID:16162653 MGI:3604916 NCBI chr 2:144,384,081...144,520,119
Ensembl chr 2:144,364,364...144,521,057
JBrowse link
positive regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP6 caspase 6 ISO RGD PMID:12917395 RGD:2301324 NCBI chr 4:109,688,628...109,703,445
Ensembl chr 4:109,688,622...109,703,583
JBrowse link
post-embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL445238.1 keratin-associated protein 21-1 acts_upstream_of_or_within ISO (MGI:3695523|PMID:17151017) MGI PMID:17151017 MGI:3695523 NCBI chr13:63,832,361...63,833,053
Ensembl chr13:63,832,361...63,833,531
JBrowse link
G BCL11B BAF chromatin remodeling complex subunit BCL11B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2662810|PMID:12717433) Ensembl
Ensembl
MGI
PMID:12717433 GO_REF:0000107 MGI:2662810 NCBI chr14:99,169,287...99,272,197
Ensembl chr14:99,169,287...99,272,197
JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3821812|PMID:18791178) Ensembl
Ensembl
MGI
PMID:18791178 GO_REF:0000107 MGI:3821812 NCBI chr 2:207,753,889...207,769,906
Ensembl chr 2:207,762,598...207,769,906
JBrowse link
G KLF4 Kruppel like factor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3697243|PMID:17060454) Ensembl
Ensembl
MGI
PMID:17060454 GO_REF:0000107 MGI:3697243 NCBI chr 9:107,484,852...107,489,769
Ensembl chr 9:107,484,852...107,490,482
JBrowse link
G MUC4 mucin 4, cell surface associated ISO RGD PMID:11120573 RGD:2303744 NCBI chr 3:195,746,771...195,811,929
Ensembl chr 3:195,746,765...195,811,973
JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:1339868|PMID:10229225) BHF-UCL
BHF-UCL
MGI
PMID:10229225 GO_REF:0000024 MGI:1339868 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
post-embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAK1 BCL2 antagonist/killer 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3692135|PMID:15955981) Ensembl
Ensembl
MGI
PMID:15955981 GO_REF:0000107 MGI:3692135 NCBI chr 6:33,572,552...33,580,296
Ensembl chr 6:33,572,547...33,580,293
JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3692135|PMID:15955981) Ensembl
Ensembl
MGI
PMID:15955981 GO_REF:0000107 MGI:3692135 NCBI chr19:48,954,825...48,961,798
Ensembl chr19:48,954,815...48,961,798
JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 acts_upstream_of_or_within ISO (MGI:5318610|PMID:22426483) MGI PMID:22426483 MGI:5318610 NCBI chr13:28,300,346...28,495,128
Ensembl chr13:28,300,346...28,495,145
JBrowse link
G HMGN1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within ISO (MGI:3614611|PMID:16466397) MGI PMID:16466397 MGI:3614611 NCBI chr21:39,342,315...39,349,088
Ensembl chr21:39,342,315...39,349,647
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5318610|PMID:22426483) MGI
Ensembl
Ensembl
PMID:22426483 GO_REF:0000107 MGI:5318610 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G MIR23A microRNA 23a acts_upstream_of_or_within ISO (MGI:5516374|PMID:24101522) MGI PMID:24101522 MGI:5516374 NCBI chr19:13,836,587...13,836,659
Ensembl chr19:13,836,587...13,836,659
JBrowse link
post-embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHLHE23 basic helix-loop-helix family member e23 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3054140|PMID:15363390) Ensembl
Ensembl
MGI
PMID:15363390 GO_REF:0000107 MGI:3054140 NCBI chr20:63,005,927...63,006,964
Ensembl chr20:63,005,927...63,007,035
JBrowse link
G EFEMP1 EGF containing fibulin extracellular matrix protein 1 involved_in IEP (PMID:25406291) UniProt
UniProt
PMID:25406291 NCBI chr 2:55,865,967...55,924,163
Ensembl chr 2:55,865,967...55,924,139
JBrowse link
G FBN1 fibrillin 1 involved_in IEP (PMID:25406291) UniProt
UniProt
PMID:25406291 NCBI chr15:48,408,313...48,645,709
Ensembl chr15:48,408,313...48,645,721
JBrowse link
G MFAP2 microfibril associated protein 2 involved_in IEP (PMID:25406291) UniProt
UniProt
PMID:25406291 NCBI chr 1:16,974,502...16,981,583
Ensembl chr 1:16,974,502...16,980,632
JBrowse link
post-embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC66 coiled-coil domain containing 66 acts_upstream_of_or_within ISO (MGI:5141557|PMID:21680557) MGI PMID:21680557 MGI:5141557 NCBI chr 3:56,557,125...56,621,837
Ensembl chr 3:56,557,161...56,621,837
JBrowse link
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3051713|PMID:15316081), (MGI:3690408|PMID:16885194) Ensembl
Ensembl
MGI
PMID:15316081 PMID:16885194 GO_REF:0000107 MGI:3051713 MGI:3690408 NCBI chr 1:197,201,504...197,478,455
Ensembl chr 1:197,268,204...197,478,455
JBrowse link
G DSCAM DS cell adhesion molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3768917|PMID:18216855) Ensembl
Ensembl
MGI
PMID:18216855 GO_REF:0000107 MGI:3768917 NCBI chr21:40,010,999...40,847,158
Ensembl chr21:40,010,999...40,847,158
JBrowse link
G GRK1 G protein-coupled receptor kinase 1 acts_upstream_of_or_within ISO (MGI:1334014|PMID:10097103) MGI PMID:10097103 MGI:1334014 NCBI chr13:113,645,771...113,737,736
Ensembl chr13:113,667,219...113,737,736
JBrowse link
regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1B cyclin dependent kinase inhibitor 1B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1309707|PMID:9784491) Ensembl
Ensembl
MGI
PMID:9784491 GO_REF:0000107 MGI:1309707 NCBI chr12:12,717,368...12,722,369
Ensembl chr12:12,685,498...12,722,369
JBrowse link
G CDKN1C cyclin dependent kinase inhibitor 1C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1309707|PMID:9784491) MGI
Ensembl
Ensembl
PMID:9784491 GO_REF:0000107 MGI:1309707 NCBI chr11:2,883,218...2,885,775
Ensembl chr11:2,883,213...2,885,775
JBrowse link
regulation of neural retina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL4 delta like canonical Notch ligand 4 involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr15:40,929,340...40,939,073
Ensembl chr15:40,929,340...40,939,073
JBrowse link
G PTF1A pancreas associated transcription factor 1a involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr10:23,192,312...23,194,245
Ensembl chr10:23,192,312...23,194,245
JBrowse link
G SIX3 SIX homeobox 3 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 2:44,941,702...44,946,071
Ensembl chr 2:44,941,702...44,946,071
JBrowse link
regulation of retina development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF4 CUGBP Elav-like family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5523751|PMID:23932931) Ensembl
Ensembl
MGI
PMID:23932931 GO_REF:0000107 MGI:5523751 NCBI chr18:37,243,040...37,565,798
Ensembl chr18:37,243,040...37,565,827
JBrowse link
regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor acts_upstream_of_or_within ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chr11:27,654,893...27,722,030
Ensembl chr11:27,654,893...27,722,058
JBrowse link
G CNTF ciliary neurotrophic factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2155023|PMID:11747369) Ensembl
Ensembl
MGI
PMID:11747369 GO_REF:0000107 MGI:2155023 NCBI chr11:58,622,665...58,625,733
Ensembl chr11:58,622,665...58,625,733
JBrowse link
G FGF2 fibroblast growth factor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2155023|PMID:11747369) MGI
Ensembl
Ensembl
PMID:11747369 GO_REF:0000107 MGI:2155023 NCBI chr 4:122,826,708...122,898,236
Ensembl chr 4:122,826,708...122,898,236
JBrowse link
retina development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACHE acetylcholinesterase (Cartwright blood group) involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603700|PMID:15579149) Ensembl
Ensembl
MGI
PMID:15579149 GO_REF:0000107 MGI:3603700 NCBI chr 7:100,889,994...100,896,994
Ensembl chr 7:100,889,994...100,896,974
JBrowse link
G ACTB actin beta ISO RGD PMID:22916200 RGD:9587758 NCBI chr 7:5,527,148...5,530,601
Ensembl chr 7:5,526,409...5,563,902
JBrowse link
G AGTPBP1 ATP/GTP binding carboxypeptidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5754679|PMID:24791901)
(MGI:4849309|PMID:21052544)
Ensembl
Ensembl
MGI
PMID:21052544 PMID:24791901 GO_REF:0000107 MGI:4849309 MGI:5754679 NCBI chr 9:85,546,539...85,742,029
Ensembl chr 9:85,546,539...85,742,029
JBrowse link
G AHI1 Abelson helper integration site 1 acts_upstream_of_or_within ISO (MGI:4461813|PMID:20592197) MGI PMID:20592197 MGI:4461813 NCBI chr 6:135,283,532...135,497,771
Ensembl chr 6:135,283,407...135,498,434
JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (MGI:3699582|PMID:10982921) MGI PMID:10982921 MGI:3699582 NCBI chr 5:112,707,498...112,846,239
Ensembl chr 5:112,707,498...112,846,239
JBrowse link
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1277631|PMID:9699561) Ensembl
Ensembl
MGI
PMID:9699561 GO_REF:0000107 MGI:1277631 NCBI chr19:48,954,825...48,961,798
Ensembl chr19:48,954,815...48,961,798
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO RGD PMID:17069773 RGD:2289001 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2654391|PMID:12654290) Ensembl
Ensembl
MGI
PMID:12654290 GO_REF:0000107 MGI:2654391 NCBI chr 4:94,757,955...95,158,453
Ensembl chr 4:94,757,955...95,158,448
JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 ISO RGD PMID:10482474 RGD:5129487 NCBI chr 2:202,376,310...202,567,751
Ensembl chr 2:202,376,327...202,567,751
JBrowse link
G C3 complement C3 acts_upstream_of_or_within ISO (MGI:5883383|PMID:28057640) MGI PMID:28057640 MGI:5883383 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chr  X:49,205,063...49,233,404
Ensembl chr  X:49,205,063...49,233,371
JBrowse link
G CALB1 calbindin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10741426) UniProt
Ensembl
PMID:10741426 GO_REF:0000107 NCBI chr 8:90,058,608...90,082,879
Ensembl chr 8:90,058,608...90,095,475
JBrowse link
G CEP290 centrosomal protein 290 acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099
JBrowse link
G CFD complement factor D acts_upstream_of_or_within ISO (MGI:5883383|PMID:28057640) MGI PMID:28057640 MGI:5883383 NCBI chr19:859,664...863,641
Ensembl chr19:859,664...863,641
JBrowse link
G CFH complement factor H acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
ISO (MGI:3760334|PMID:17921253), (MGI:5883383|PMID:28057640)
(MGI:5883383|PMID:28057640)
(MGI:6304909|PMID:30705315)
MGI PMID:17921253 PMID:28057640 PMID:30705315 MGI:3760334 MGI:5883383 MGI:6304909 NCBI chr 1:196,652,033...196,747,504
Ensembl chr 1:196,652,043...196,747,504
JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 involved_in IMP (PMID:15300250) BHF-UCL
BHF-UCL
PMID:15300250 NCBI chr 8:60,678,740...60,868,028
Ensembl chr 8:60,678,740...60,868,028
JBrowse link
G CLCN2 chloride voltage-gated channel 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849309|PMID:21052544) Ensembl
Ensembl
MGI
PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr 3:184,346,185...184,361,605
Ensembl chr 3:184,346,185...184,361,650
JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849309|PMID:21052544)
(MGI:3695117|PMID:15565184)
Ensembl
Ensembl
MGI
PMID:15565184 PMID:21052544 GO_REF:0000107 MGI:3695117 MGI:4849309 NCBI chr 8:1,755,778...1,786,570
Ensembl chr 8:1,755,778...1,801,711
JBrowse link
G CRB1 crumbs cell polarity complex component 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5315300|PMID:22447858), (MGI:5608935|PMID:25147295) MGI
Ensembl
PMID:22447858 PMID:25147295 GO_REF:0000107 MGI:5315300 MGI:5608935 NCBI chr 1:197,201,504...197,478,455
Ensembl chr 1:197,268,204...197,478,455
JBrowse link
G CRX cone-rod homeobox acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chr19:47,821,937...47,843,324
Ensembl chr19:47,819,779...47,843,330
JBrowse link
G DCX doublecortin involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr  X:111,293,779...111,412,205
Ensembl chr  X:111,293,779...111,412,429
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:170,282,200...170,291,078
Ensembl chr 6:170,282,206...170,306,565
JBrowse link
G DRD4 dopamine receptor D4 ISO RGD PMID:18778704 RGD:7175073 NCBI chr11:637,269...640,706
Ensembl chr11:637,269...640,706
JBrowse link
G DTNBP1 dystrobrevin binding protein 1 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:23954924 GO_REF:0000107 RGD:11251759 NCBI chr 6:15,522,803...15,663,058
Ensembl chr 6:15,522,807...15,663,058
JBrowse link
G GDNF glial cell derived neurotrophic factor ISO RGD PMID:16650834 RGD:2324945 NCBI chr 5:37,812,677...37,840,044
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849309|PMID:21052544) Ensembl
Ensembl
MGI
PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr 3:50,191,610...50,197,696
Ensembl chr 3:50,191,610...50,197,696
JBrowse link
G GNB1 G protein subunit beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849309|PMID:21052544) Ensembl
Ensembl
MGI
PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr 1:1,785,286...1,891,087
Ensembl chr 1:1,785,285...1,891,117
JBrowse link
G GRM6 glutamate metabotropic receptor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849309|PMID:21052544) Ensembl
Ensembl
MGI
PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr 5:178,978,327...178,995,320
Ensembl chr 5:178,977,587...178,996,206
JBrowse link
G GRN granulin precursor acts_upstream_of_or_within ISO (MGI:6101836|PMID:28728022) MGI PMID:28728022 MGI:6101836 NCBI chr17:44,345,302...44,353,106
Ensembl chr17:44,345,246...44,353,106
JBrowse link
G HPCA hippocalcin involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:7789406 GO_REF:0000107 RGD:9686441 NCBI chr 1:32,885,965...32,894,646
Ensembl chr 1:32,885,994...32,898,441
JBrowse link
G HPS1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chr10:98,416,193...98,446,963
Ensembl chr10:98,416,198...98,446,935
JBrowse link
G IKZF1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (MGI:3831471|PMID:18940586) MGI PMID:18940586 MGI:3831471 NCBI chr 7:50,303,453...50,405,101
Ensembl chr 7:50,304,068...50,405,101
JBrowse link
G IL4 interleukin 4 ISO RGD PMID:23070471 RGD:7829830 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678
JBrowse link
G IMPDH1 inosine monophosphate dehydrogenase 1 ISO RGD PMID:18295529 RGD:5144133 NCBI chr 7:128,392,277...128,409,989
Ensembl chr 7:128,392,277...128,410,252
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:18295529 GO_REF:0000107 RGD:5144133 NCBI chr 3:49,024,325...49,029,750
Ensembl chr 3:49,024,325...49,029,447
JBrowse link
G JMJD6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3580691|PMID:15345036) Ensembl
Ensembl
MGI
PMID:15345036 GO_REF:0000107 MGI:3580691 NCBI chr17:76,712,830...76,726,783
Ensembl chr17:76,712,832...76,726,799
JBrowse link
G LAMA1 laminin subunit alpha 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4849309|PMID:21052544) MGI
Ensembl
PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr18:6,941,742...7,117,797
Ensembl chr18:6,941,742...7,117,797
JBrowse link
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4454394|PMID:19907020) Ensembl
Ensembl
MGI
PMID:19907020 GO_REF:0000107 MGI:4454394 NCBI chr 3:49,121,114...49,133,066
Ensembl chr 3:49,121,114...49,133,118
JBrowse link
G LAMC3 laminin subunit gamma 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4454394|PMID:19907020) Ensembl
Ensembl
MGI
PMID:19907020 GO_REF:0000107 MGI:4454394 NCBI chr 9:131,009,174...131,094,473
Ensembl chr 9:131,009,174...131,094,473
JBrowse link
G LHX1 LIM homeobox 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10741426) UniProt
Ensembl
PMID:10741426 GO_REF:0000107 NCBI chr17:36,937,475...36,944,612
Ensembl chr17:36,936,785...36,944,612
JBrowse link
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3836385|PMID:19146846) Ensembl
Ensembl
MGI
PMID:19146846 GO_REF:0000107 MGI:3836385 NCBI chr 9:124,011,759...124,033,301
Ensembl chr 9:124,001,670...124,033,301
JBrowse link
G LIF LIF interleukin 6 family cytokine ISO RGD PMID:16643897 RGD:2326157 NCBI chr22:30,240,453...30,257,487
Ensembl chr22:30,240,453...30,246,759
JBrowse link
G LPCAT1 lysophosphatidylcholine acyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849309|PMID:21052544) Ensembl
Ensembl
MGI
PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr 5:1,461,427...1,523,960
Ensembl chr 5:1,456,480...1,523,962
JBrowse link
G MAX MYC associated factor X involved_in ISO
IEA