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ONTOLOGY REPORT - ANNOTATIONS

Term:fibrillar center
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Accession:GO:0001650 term browser browse the term
Definition:A structure found most metazoan nucleoli, but not usually found in lower eukaryotes; surrounded by the dense fibrillar component; the zone of transcription from multiple copies of the pre-rRNA genes is in the border region between these two structures.
Synonyms:exact_synonym: fibrillar centre


show annotations for term's descendants           Sort by:
fibrillar center term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaca acetyl-CoA carboxylase alpha located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr10:69,511,627...69,773,888
Ensembl chr10:69,014,170...69,276,457 		JBrowse link
G Aff4 ALF transcription elongation factor 4 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr10:37,498,825...37,579,751
Ensembl chr10:37,498,825...37,579,751 		JBrowse link
G Ager advanced glycosylation end product-specific receptor located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr20:4,152,758...4,155,956
Ensembl chr20:4,147,890...4,151,078 		JBrowse link
G Akna AT-hook transcription factor located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 5:81,792,928...81,839,936
Ensembl chr 5:76,777,415...76,816,017 		JBrowse link
G Ankrd1 ankyrin repeat domain 1 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:243,228,460...243,237,014
Ensembl chr 1:233,815,851...233,834,919 		JBrowse link
G Apex2 apurinic/apyrimidinic endodeoxyribonuclease 2 located_in ISO RGD GO_REF:0000052 NCBI chr  X:22,914,943...22,937,713
Ensembl chr  X:19,487,419...19,508,439 		JBrowse link
G Arhgap32 Rho GTPase activating protein 32 located_in
is_active_in		 ISO
IBA		 GO_REF:0000033 RGD
GO_Central		 GO_REF:0000033 GO_REF:0000052 NCBI chr 8:30,421,269...30,681,653
Ensembl chr 8:30,421,515...30,678,454 		JBrowse link
G Arhgap33 Rho GTPase activating protein 33 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:85,776,112...85,789,767
Ensembl chr 1:85,776,108...85,789,678 		JBrowse link
G Atp5mj ATP synthase membrane subunit j located_in ISO RGD GO_REF:0000052 NCBI chr 6:131,018,737...131,024,488
Ensembl chr 1:168,472,329...168,472,610
Ensembl chr 1:168,472,329...168,472,610 		JBrowse link
G Atp5mj-ps1 ATP synthase membrane subunit j, pseudogene 1 located_in ISO RGD GO_REF:0000052 NCBI chr 1:168,472,019...168,472,630
Ensembl chr 1:168,472,329...168,472,610 		JBrowse link
G Bcl9l BCL9 like located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 8:53,708,770...53,738,880
Ensembl chr 8:44,811,977...44,840,611 		JBrowse link
G Bnc2 basonuclin zinc finger protein 2 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 5:98,679,071...99,016,044
Ensembl chr 5:98,687,410...99,079,426 		JBrowse link
G Btbd10 BTB domain containing 10 located_in ISO RGD GO_REF:0000052 NCBI chr 1:167,431,311...167,489,320
Ensembl chr 1:167,431,329...167,489,916 		JBrowse link
G Camk4 calcium/calmodulin-dependent protein kinase IV located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr18:24,857,152...25,076,054
Ensembl chr18:24,585,269...24,802,487 		JBrowse link
G Casp7 caspase 7 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:265,442,647...265,481,938
Ensembl chr 1:255,437,172...255,476,729 		JBrowse link
G Cc2d1a coiled-coil and C2 domain containing 1A located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr19:24,011,897...24,026,937
Ensembl chr19:24,011,938...24,026,936 		JBrowse link
G Ccr2 C-C motif chemokine receptor 2 located_in ISO RGD GO_REF:0000052 NCBI chr 8:132,611,883...132,619,106
Ensembl chr 8:123,734,430...123,742,100 		JBrowse link
G Cd2ap CD2-associated protein located_in ISO RGD GO_REF:0000052 NCBI chr 9:25,580,071...25,679,968
Ensembl chr 9:18,086,984...18,182,199 		JBrowse link
G Cd2bp2 Cd2 (cytoplasmic tail) binding protein 2 located_in ISO RGD GO_REF:0000052 NCBI chr 1:191,239,899...191,244,395
Ensembl chr 1:181,809,406...181,813,448 		JBrowse link
G Cdca7l cell division cycle associated 7 like located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 6:138,793,953...138,839,889
Ensembl chr 6:138,794,228...138,839,888 		JBrowse link
G Cdk7 cyclin-dependent kinase 7 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 2:33,574,623...33,599,485
Ensembl chr 2:31,840,558...31,865,383 		JBrowse link
G Cemip cell migration inducing hyaluronidase 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:147,316,052...147,471,552
Ensembl chr 1:137,908,920...138,062,415 		JBrowse link
G Chchd1 coiled-coil-helix-coiled-coil-helix domain containing 1 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr15:3,592,719...3,593,901
Ensembl chr15:3,592,727...3,593,901 		JBrowse link
G Coil coilin located_in ISO RGD GO_REF:0000052 NCBI chr10:73,789,077...73,810,378
Ensembl chr10:73,789,488...73,810,393 		JBrowse link
G Csnk2b casein kinase 2 beta located_in ISO RGD GO_REF:0000052 NCBI chr20:3,704,833...3,709,999
Ensembl chr20:3,698,733...3,707,133 		JBrowse link
G Dab2 DAB adaptor protein 2 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 2:57,241,947...57,294,893
Ensembl chr 2:55,514,700...55,567,476 		JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 located_in ISO RGD GO_REF:0000052 NCBI chr 8:116,344,927...116,419,329
Ensembl chr 8:107,474,312...107,540,627 		JBrowse link
G Dclre1a DNA cross-link repair 1A located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:255,569,911...255,589,815
Ensembl chr 1:255,569,919...255,589,678 		JBrowse link
G Ddx46 DEAD-box helicase 46 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr17:8,947,237...8,993,705
Ensembl chr17:8,944,454...8,988,439 		JBrowse link
G Deaf1 DEAF1 transcription factor located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:205,831,428...205,865,106
Ensembl chr 1:196,401,857...196,435,541 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 located_in ISO RGD GO_REF:0000052 NCBI chr  X:157,751,651...157,757,796 JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 3:166,072,775...166,089,029
Ensembl chr 3:145,652,737...145,665,856 		JBrowse link
G Dusp11 dual specificity phosphatase 11 located_in ISO RGD GO_REF:0000052 NCBI chr 4:119,928,533...119,942,643
Ensembl chr 4:118,368,053...118,385,181 		JBrowse link
G E2f5 E2F transcription factor 5 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 2:86,997,331...87,012,908
Ensembl chr 2:86,997,332...87,012,990 		JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 7:109,462,645...109,478,021
Ensembl chr 7:107,581,930...107,608,799 		JBrowse link
G Eif3l eukaryotic translation initiation factor 3, subunit L located_in ISO
IEA		 (PMID:11592397)
GO_REF:0000107		 RGD
Ensembl		 PMID:11592397 GO_REF:0000107 NCBI chr 7:112,522,222...112,544,063
Ensembl chr 7:110,627,107...110,663,614 		JBrowse link
G En2 engrailed homeobox 2 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 4:7,221,096...7,226,943
Ensembl chr 4:7,221,096...7,226,943 		JBrowse link
G Esrra estrogen related receptor, alpha located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:213,533,309...213,543,432
Ensembl chr 1:204,104,101...204,114,268 		JBrowse link
G Exosc8 exosome component 8 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 2:141,080,568...141,087,112
Ensembl chr 2:138,930,405...138,936,928 		JBrowse link
G Ezr ezrin located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:49,373,033...49,416,573
Ensembl chr 1:46,967,658...47,011,505 		JBrowse link
G Fam111a FAM111 trypsin like peptidase A located_in ISO RGD GO_REF:0000052 NCBI chr 1:219,065,542...219,081,213
Ensembl chr 1:209,640,953...209,656,547 		JBrowse link
G Fbl fibrillarin located_in ISO RGD GO_REF:0000052 NCBI chr 1:83,469,832...83,478,932
Ensembl chr 1:83,469,832...83,478,932 		JBrowse link
G Fblim1 filamin binding LIM protein 1 located_in ISO RGD GO_REF:0000052 NCBI chr 5:159,167,004...159,198,578
Ensembl chr 5:153,883,960...153,913,757 		JBrowse link
G Fbll1 fibrillarin-like 1 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299 		JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr15:16,365,401...17,872,901
Ensembl chr15:13,934,995...15,442,340 		JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr12:21,318,251...21,390,350
Ensembl chr12:21,319,568...21,390,350 		JBrowse link
G Foxa1 forkhead box A1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 6:80,838,380...80,871,195
Ensembl chr 6:75,103,503...75,136,188 		JBrowse link
G Foxj2 forkhead box J2 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 4:157,718,990...157,745,468
Ensembl chr 4:156,046,969...156,073,518 		JBrowse link
G Gar1 GAR1 ribonucleoprotein located_in ISO RGD GO_REF:0000052 NCBI chr 2:221,049,471...221,056,749
Ensembl chr 2:218,375,353...218,382,524 		JBrowse link
G Gtf3c3 general transcription factor IIIC subunit 3 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 9:55,882,252...55,943,037
Ensembl chr 9:55,883,721...55,942,967 		JBrowse link
G Heatr1 HEAT repeat containing 1 located_in ISO RGD GO_REF:0000052 NCBI chr17:62,745,008...62,785,609
Ensembl chr17:58,051,700...58,093,948 		JBrowse link
G Herc4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr20:25,329,972...25,404,657
Ensembl chr20:25,330,280...25,404,657 		JBrowse link
G Hoxb5 homeo box B5 located_in ISO RGD GO_REF:0000052 NCBI chr10:81,269,372...81,271,580
Ensembl chr10:81,269,372...81,271,580 		JBrowse link
G Imp4 IMP U3 small nucleolar ribonucleoprotein 4 located_in ISO RGD GO_REF:0000052 NCBI chr 9:36,654,127...36,659,265
Ensembl chr 9:36,654,401...36,660,075 		JBrowse link
G Ino80c INO80 complex subunit C located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr18:15,653,508...15,752,455
Ensembl chr18:15,378,770...15,393,403 		JBrowse link
G Ip6k1 inositol hexakisphosphate kinase 1 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 8:117,594,177...117,613,266 JBrowse link
G Ip6k2 inositol hexakisphosphate kinase 2 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 8:118,362,154...118,388,668
Ensembl chr 8:109,484,310...109,510,166 		JBrowse link
G Jazf1 JAZF zinc finger 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 4:83,210,054...83,513,790
Ensembl chr 4:81,881,061...82,183,100 		JBrowse link
G Kdm4a lysine demethylase 4A located_in ISO RGD GO_REF:0000052 NCBI chr 5:136,958,178...137,004,942
Ensembl chr 5:131,672,754...131,719,501 		JBrowse link
G Kdm5d lysine demethylase 5D located_in ISO RGD GO_REF:0000052 NCBI chr  Y:551,621...647,742
Ensembl chr  Y:530,401...624,018 		JBrowse link
G Kif7 kinesin family member 7 located_in ISO RGD GO_REF:0000052 NCBI chr 1:133,639,487...133,658,539
Ensembl chr 1:133,640,065...133,658,576 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr14:32,901,615...32,978,895
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G Klf6 KLF transcription factor 6 located_in ISO RGD GO_REF:0000052 NCBI chr17:69,449,483...69,458,478
Ensembl chr17:64,531,463...64,588,570 		JBrowse link
G Kmt5b lysine methyltransferase 5B located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:210,429,672...210,479,042
Ensembl chr 1:201,000,444...201,049,819 		JBrowse link
G Lbr lamin B receptor located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr13:96,071,058...96,095,709
Ensembl chr13:93,538,920...93,564,017 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component located_in ISO RGD GO_REF:0000052 NCBI chr 8:85,080,036...85,104,471
Ensembl chr 8:76,199,099...76,223,983 		JBrowse link
G Lipa lipase A, lysosomal acid type located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:241,437,524...241,470,936
Ensembl chr 1:232,024,356...232,057,633 		JBrowse link
G Malt1 MALT1 paracaspase located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr18:61,212,290...61,266,272
Ensembl chr18:58,942,299...58,994,260 		JBrowse link
G Map3k14 mitogen-activated protein kinase kinase kinase 14 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr10:88,165,349...88,215,558
Ensembl chr10:88,165,351...88,215,523 		JBrowse link
G Mbd6 methyl-CpG binding domain protein 6 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 7:63,107,562...63,115,841
Ensembl chr 7:63,107,562...63,113,274 		JBrowse link
G Mettl5 methyltransferase 5, N6-adenosine located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 3:54,625,790...54,638,066
Ensembl chr 3:54,625,793...54,638,039 		JBrowse link
G Mllt1 MLLT1, super elongation complex subunit located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 9:1,818,204...1,863,091
Ensembl chr 9:1,731,080...1,775,970 		JBrowse link
G Mri1 methylthioribose-1-phosphate isomerase 1 located_in ISO RGD GO_REF:0000052 NCBI chr19:23,907,327...23,913,721
Ensembl chr19:23,907,335...23,913,320 		JBrowse link
G Mrpl23 mitochondrial ribosomal protein L23 located_in ISO RGD GO_REF:0000052 NCBI chr 1:197,687,452...197,695,222
Ensembl chr 1:197,687,347...197,695,222 		JBrowse link
G Mtdh metadherin located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 7:67,192,592...67,250,819
Ensembl chr 7:65,306,400...65,364,413 		JBrowse link
G Ncl nucleolin IDA RGD PMID:6206987 RGD:9693699 NCBI chr 9:94,447,559...94,456,083
Ensembl chr 9:86,998,019...87,008,136 		JBrowse link
G Nedd1 NEDD1 gamma-tubulin ring complex targeting factor located_in ISO RGD GO_REF:0000052 NCBI chr 7:27,233,050...27,274,486
Ensembl chr 7:27,233,316...27,274,486 		JBrowse link
G Nfib nuclear factor I/B located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 5:101,805,168...102,020,618
Ensembl chr 5:96,764,653...96,975,479 		JBrowse link
G Nfic nuclear factor I/C located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 7:8,278,210...8,309,936
Ensembl chr 7:8,253,361...8,309,936 		JBrowse link
G Nfkbie NFKB inhibitor epsilon located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 9:15,443,600...15,450,437
Ensembl chr 9:15,436,941...15,450,437 		JBrowse link
G Nhej1 nonhomologous end-joining factor 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 9:83,974,995...84,071,161
Ensembl chr 9:76,526,324...76,622,444 		JBrowse link
G Nolc1 nucleolar and coiled-body phosphoprotein 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:254,870,195...254,881,070
Ensembl chr 1:244,921,377...244,932,088 		JBrowse link
G Nono non-POU domain containing, octamer-binding located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr  X:70,594,116...70,611,976
Ensembl chr  X:66,554,098...66,571,952 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor located_in ISO
IEA		 (PMID:27729611)
GO_REF:0000107		 RGD
Ensembl		 PMID:27729611 GO_REF:0000107 NCBI chr 1:85,757,271...85,765,089
Ensembl chr 1:76,629,069...76,636,902 		JBrowse link
G Nop56 NOP56 ribonucleoprotein located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 3:117,476,963...117,481,847
Ensembl chr 3:117,477,053...117,481,841 		JBrowse link
G Nop58 NOP58 ribonucleoprotein located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 9:68,614,992...68,638,911
Ensembl chr 9:61,120,929...61,144,810 		JBrowse link
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 7:134,247,153...134,268,044
Ensembl chr 7:132,374,840...132,389,297 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 located_in ISO RGD GO_REF:0000052 NCBI chr11:28,382,835...28,466,483
Ensembl chr11:14,895,553...14,981,761 		JBrowse link
G Nuak1 NUAK family kinase 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 7:19,330,034...19,401,918
Ensembl chr 7:19,329,933...19,401,913 		JBrowse link
G Nufip1 nuclear FMR1 interacting protein 1 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr15:51,429,518...51,460,308
Ensembl chr15:51,429,549...51,460,310 		JBrowse link
G Orc6 origin recognition complex, subunit 6 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr19:37,931,085...37,938,856
Ensembl chr19:21,757,866...21,765,662 		JBrowse link
G Otp orthopedia homeobox located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 2:26,108,158...26,116,359
Ensembl chr 2:26,108,163...26,116,359 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:92,811,197...92,816,775
Ensembl chr 1:83,668,813...83,689,237 		JBrowse link
G Pafah1b2 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 8:46,260,069...46,312,073
Ensembl chr 8:46,261,064...46,279,833 		JBrowse link
G Pak6 p21 (RAC1) activated kinase 6 located_in ISO RGD GO_REF:0000052 NCBI chr 3:126,092,576...126,128,320
Ensembl chr 3:105,638,653...105,672,975 		JBrowse link
G Pex14 peroxisomal biogenesis factor 14 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 5:164,682,876...164,819,352
Ensembl chr 5:159,399,776...159,536,272 		JBrowse link
G Plrg1 pleiotropic regulator 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 2:170,706,188...170,722,519
Ensembl chr 2:168,408,124...168,424,522 		JBrowse link
G Polr1b RNA polymerase I subunit B located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 3:136,787,130...136,811,608
Ensembl chr 3:116,333,889...116,358,379 		JBrowse link
G Polr1c RNA polymerase I and III subunit C located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 9:22,233,318...22,237,430
Ensembl chr 9:14,735,714...14,739,852 		JBrowse link
G Polr1e RNA polymerase I subunit E located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 5:64,075,123...64,090,900
Ensembl chr 5:59,279,460...59,295,369 		JBrowse link
G Polr1g RNA polymerase I subunit G located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 1:88,135,493...88,138,769
Ensembl chr 1:79,007,490...79,010,766 		JBrowse link
G Polr2f RNA polymerase II, I and III subunit F located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 7:112,592,977...112,604,681
Ensembl chr 7:110,712,572...110,724,234 		JBrowse link
G Prmt7 protein arginine methyltransferase 7 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr19:51,020,596...51,071,401
Ensembl chr19:34,110,747...34,162,577 		JBrowse link
G Pspc1 paraspeckle component 1 located_in ISO RGD GO_REF:0000052 NCBI chr15:34,941,445...35,027,460
Ensembl chr15:30,828,626...30,911,202 		JBrowse link
G Rae1 ribonucleic acid export 1 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 3:161,779,096...161,794,048
Ensembl chr 3:161,779,088...161,794,038 		JBrowse link
G Rai14 retinoic acid induced 14 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 2:59,546,284...59,682,687
Ensembl chr 2:59,546,284...59,681,971 		JBrowse link
G Rerg RAS-like, estrogen-regulated, growth-inhibitor located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 4:171,712,794...171,821,268
Ensembl chr 4:169,982,279...170,089,715 		JBrowse link
G Rgs22 regulator of G-protein signaling 22 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 7:67,188,531...67,308,805
Ensembl chr 7:67,188,519...67,308,875 		JBrowse link
G Rnmt RNA (guanine-7-) methyltransferase located_in ISO RGD GO_REF:0000052 NCBI chr18:61,886,230...61,909,775
Ensembl chr18:61,886,292...61,909,775 		JBrowse link
G Rpain RPA interacting protein located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr10:56,190,975...56,198,490
Ensembl chr10:55,692,417...55,699,933 		JBrowse link
G Rpp38 ribonuclease P/MRP subunit p38 located_in
is_active_in		 ISO
IEA
IBA		 GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000052 GO_REF:0000107 NCBI chr17:74,914,066...74,917,742
Ensembl chr17:74,908,932...74,927,431 		JBrowse link
G Rps6ka6 ribosomal protein S6 kinase A6 located_in ISO RGD GO_REF:0000052 NCBI chr  X:76,353,316...76,454,502
Ensembl chr  X:76,353,760...76,454,484 		JBrowse link
G Rreb1 ras responsive element binding protein 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr17:27,082,217...27,208,061
Ensembl chr17:26,876,697...27,002,615 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 6:48,774,985...48,788,245
Ensembl chr 6:43,047,658...43,059,699 		JBrowse link
G Samd4a sterile alpha motif domain containing 4A located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr15:20,135,994...20,352,131
Ensembl chr15:20,134,377...20,348,380 		JBrowse link
G Sap30l SAP30-like located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr10:42,480,201...42,488,139
Ensembl chr10:41,979,687...41,987,658 		JBrowse link
G Selenbp1 selenium binding protein 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 2:185,183,022...185,193,612
Ensembl chr 2:182,493,978...182,504,594 		JBrowse link
G Sesn1 sestrin 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr20:46,876,918...46,970,010
Ensembl chr20:45,294,871...45,387,697 		JBrowse link
G Sirt1 sirtuin 1 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Smad7 SMAD family member 7 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr18:71,263,508...71,291,849
Ensembl chr18:68,988,429...69,016,765 		JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Smarca5 SNF2 related chromatin remodeling ATPase 5 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr19:44,172,465...44,208,967
Ensembl chr19:27,271,148...27,304,594 		JBrowse link
G Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 located_in ISO RGD GO_REF:0000052 NCBI chr20:12,740,105...12,763,054
Ensembl chr20:12,741,477...12,763,620 		JBrowse link
G Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 located_in ISO RGD GO_REF:0000052 NCBI chr 7:134,288,565...134,302,179
Ensembl chr 7:134,287,675...134,297,226 		JBrowse link
G Snai1 snail family transcriptional repressor 1 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 3:176,667,476...176,671,965
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 located_in ISO RGD GO_REF:0000052 NCBI chr 3:150,852,814...150,862,364
Ensembl chr 3:130,399,248...130,408,812 		JBrowse link
G Sp140 SP140 nuclear body protein located_in ISO RGD GO_REF:0000052 NCBI chr 9:93,672,536...93,722,596
Ensembl chr 9:86,224,513...86,274,542 		JBrowse link
G Spata2 spermatogenesis associated 2 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 3:176,621,974...176,639,784
Ensembl chr 3:156,202,967...156,211,705 		JBrowse link
G Specc1 sperm antigen with calponin homology and coiled-coil domains 1 located_in ISO RGD GO_REF:0000052 NCBI chr10:47,138,351...47,412,311
Ensembl chr10:46,638,809...46,912,802 		JBrowse link
G Stag2 STAG2 cohesin complex component located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr  X:125,839,660...125,971,209
Ensembl chr  X:120,974,857...121,105,677 		JBrowse link
G Stn1 STN1 subunit of CST complex located_in ISO RGD GO_REF:0000052 NCBI chr 1:256,336,916...256,371,143
Ensembl chr 1:246,395,613...246,429,531 		JBrowse link
G Stox1 storkhead box 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr20:31,140,993...31,209,126
Ensembl chr20:30,598,168...30,666,939 		JBrowse link
G Sumo1 small ubiquitin-like modifier 1 IDA RGD PMID:17587596 RGD:2301351 NCBI chr 9:68,572,901...68,602,803
Ensembl chr 9:61,077,435...61,108,761 		JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 6:100,272,729...100,586,364
Ensembl chr 6:94,537,088...94,848,064 		JBrowse link
G Taf1c TATA-box binding protein associated factor, RNA polymerase 1 subunit C located_in
is_active_in		 ISO
IEA
IBA		 GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000052 GO_REF:0000107 NCBI chr19:64,561,079...64,567,599
Ensembl chr19:47,652,452...47,658,971 		JBrowse link
G Taf4b TATA-box binding protein associated factor 4b located_in ISO RGD GO_REF:0000052 NCBI chr18:5,952,737...6,086,408
Ensembl chr18:5,952,769...6,068,307 		JBrowse link
G Tax1bp3 Tax1 binding protein 3 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr10:57,795,845...57,800,363
Ensembl chr10:57,795,382...57,800,363 		JBrowse link
G Tcof1 treacle ribosome biogenesis factor 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr18:54,267,015...54,300,324
Ensembl chr18:54,267,026...54,300,324 		JBrowse link
G Terf1 telomeric repeat binding factor 1 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 5:8,226,345...8,255,614
Ensembl chr 5:3,443,106...3,472,340 		JBrowse link
G Thap1 THAP domain containing 1 located_in ISO RGD GO_REF:0000052 NCBI chr16:72,608,096...72,612,690
Ensembl chr16:65,904,230...65,909,942 		JBrowse link
G Timm13 translocase of inner mitochondrial membrane 13 located_in ISO RGD GO_REF:0000052 NCBI chr 7:9,459,490...9,460,849
Ensembl chr 7:8,809,058...8,809,910 		JBrowse link
G Timm44 translocase of inner mitochondrial membrane 44 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr12:7,410,424...7,428,179
Ensembl chr12:2,612,581...2,629,351 		JBrowse link
G Top1 DNA topoisomerase I located_in IDA
IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 PMID:17587596 GO_REF:0000052 GO_REF:0000107, RGD:2301351 NCBI chr 3:169,713,195...169,796,330
Ensembl chr 3:149,293,403...149,376,623 		JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 9:99,521,176...99,557,966
Ensembl chr 9:92,073,640...92,108,977 		JBrowse link
G Traf4 Tnf receptor associated factor 4 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr10:63,552,251...63,558,356
Ensembl chr10:63,054,181...63,060,284 		JBrowse link
G Trerf1 transcriptional regulating factor 1 located_in ISO RGD GO_REF:0000052 NCBI chr 9:21,131,772...21,355,830
Ensembl chr 9:13,634,126...13,857,029 		JBrowse link
G Trim27 tripartite motif-containing 27 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr17:48,233,999...48,246,348
Ensembl chr17:43,538,285...43,550,643 		JBrowse link
G Trim41 tripartite motif-containing 41 located_in ISO RGD GO_REF:0000052 NCBI chr10:33,676,348...33,687,432
Ensembl chr10:33,175,213...33,186,694 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 6:123,927,657...124,025,354
Ensembl chr 6:118,198,201...118,252,418 		JBrowse link
G Ttf1 transcription termination factor 1 located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr 3:32,782,544...32,807,202
Ensembl chr 3:12,384,655...12,409,257 		JBrowse link
G Txnrd1 thioredoxin reductase 1 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr 7:22,717,620...22,802,553
Ensembl chr 7:20,830,045...20,907,863 		JBrowse link
G Ubd ubiquitin D located_in ISO RGD GO_REF:0000052 NCBI chr20:1,390,734...1,392,685
Ensembl chr20:1,385,864...1,408,639
Ensembl chr20:1,385,864...1,408,639 		JBrowse link
G Ube2i ubiquitin-conjugating enzyme E2I IDA RGD PMID:17587596 RGD:2301351 NCBI chr10:14,782,245...14,802,911
Ensembl chr10:69,701,618...69,702,443
Ensembl chr10:69,701,618...69,702,443 		JBrowse link
G Ubtf upstream binding transcription factor located_in IDA
IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 PMID:17587596 GO_REF:0000052 GO_REF:0000107, RGD:2301351 NCBI chr10:87,758,346...87,775,377
Ensembl chr10:87,258,217...87,272,969 		JBrowse link
G Urb1 URB1 ribosome biogenesis homolog located_in ISO
IEA		 GO_REF:0000107 RGD
Ensembl		 GO_REF:0000052 GO_REF:0000107 NCBI chr11:43,490,633...43,551,398
Ensembl chr11:30,004,539...30,065,363 		JBrowse link
G Uso1 USO1 vesicle transport factor located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr14:16,150,921...16,216,389
Ensembl chr14:15,866,638...15,932,171 		JBrowse link
G Utp15 UTP15, small subunit processome component located_in ISO
IEA
ISS		 (PMID:24219289)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24219289 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:29,594,405...29,612,819
Ensembl chr 2:29,594,941...29,612,773 		JBrowse link
G Utp4 UTP4 small subunit processome component located_in ISO (PMID:24219289) RGD PMID:24219289 GO_REF:0000052 NCBI chr19:51,696,437...51,730,323
Ensembl chr19:34,792,457...34,820,550 		JBrowse link
G Wdr33 WD repeat domain 33 located_in ISO RGD GO_REF:0000052 NCBI chr18:23,432,233...23,535,460
Ensembl chr18:23,432,191...23,468,597 		JBrowse link
G Wdr43 WD repeat domain 43 located_in ISO
IEA		 (PMID:24219289)
GO_REF:0000107		 RGD
Ensembl		 PMID:24219289 GO_REF:0000107 NCBI chr 6:23,845,499...23,884,846
Ensembl chr 6:23,845,499...23,884,846 		JBrowse link
G Zfp174 zinc finger protein 174 located_in IEA
ISO		 GO_REF:0000107 Ensembl
RGD		 GO_REF:0000052 GO_REF:0000107 NCBI chr10:11,666,580...11,676,328
Ensembl chr10:11,669,913...11,676,312 		JBrowse link
G Znrf2 zinc and ring finger 2 located_in ISO RGD GO_REF:0000052 NCBI chr 4:85,274,626...85,358,083
Ensembl chr 4:83,949,309...84,027,818 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21364
    cellular anatomical structure 21069
      fibrillar center 162
Path 2
Term Annotations click to browse term
  cellular_component 21364
    cellular anatomical structure 21069
      intracellular anatomical structure 15590
        intracellular organelle 13880
          intracellular membrane-bounded organelle 12307
            nucleus 7684
              nuclear lumen 4239
                nucleolus 1062
                  fibrillar center 162
paths to the root