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ONTOLOGY REPORT - ANNOTATIONS

Term:ganglioside biosynthetic process
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Accession:GO:0001574 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of ceramide oligosaccharides carrying in addition to other sugar residues, one or more sialic acid residues.
Synonyms:exact_synonym: ganglioside anabolism;   ganglioside biosynthesis;   ganglioside formation;   ganglioside synthesis


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ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT4 beta-1,3-galactosyltransferase 4 involved_in ISO (PMID:9582303) BHF-UCL PMID:9582303 NCBI chr12:2,719,112...2,720,997 JBrowse link
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10021458) Ensembl
MGI
TreeGrafter		 PMID:10021458 GO_REF:0000107 GO_REF:0000118 NCBI chr10:1,703,846...1,756,837
Ensembl chr10:1,703,169...1,709,994 		JBrowse link
G ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:70,060,406...70,583,974
Ensembl chr 6:70,062,555...70,574,865 		JBrowse link
G ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:55,499,100...55,513,562
Ensembl chr 9:55,504,639...55,513,174 		JBrowse link
G ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:69,706,717...69,867,760
Ensembl chr 6:69,709,114...69,867,648 		JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10702226) Ensembl
MGI
TreeGrafter		 PMID:10702226 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:55,520,083...55,533,205
Ensembl chr 9:55,520,109...55,532,055 		JBrowse link
G ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:47,588,804...47,654,853
Ensembl chr 3:47,588,797...47,655,593 		JBrowse link
G ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:18,541,197...18,557,887
Ensembl chr 1:18,549,942...18,557,893 		JBrowse link
G ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:9,708,130...9,801,547
Ensembl chr 3:9,708,173...9,845,015 		JBrowse link
G ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:19,392,690...19,618,127
Ensembl chr 2:19,482,468...19,616,339 		JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:36,220,973...36,241,482
Ensembl chr24:36,221,189...36,300,804 		JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:57,849,872...57,917,289
Ensembl chr 7:57,849,884...57,914,360 		JBrowse link
G C24H20orf173 chromosome 24 C20orf173 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:24,480,846...24,494,388 JBrowse link
G LOC102156298 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:24,468,573...24,471,837 JBrowse link
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:29,853,182...29,949,004
Ensembl chr13:29,846,834...29,872,918 		JBrowse link
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:76,377,782...76,427,998
Ensembl chr 5:76,379,702...76,394,525 		JBrowse link
G ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:16,324,752...16,434,256
Ensembl chr15:16,324,899...16,401,616 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17917
    metabolic process 10998
      amide metabolic process 443
        ceramide metabolic process 108
          ganglioside metabolic process 28
            ganglioside biosynthetic process 17
              ganglioside biosynthetic process via lactosylceramide 7
Path 2
Term Annotations click to browse term
  biological_process 17917
    metabolic process 10998
      primary metabolic process 9574
        lipid metabolic process 1366
          cellular lipid metabolic process 1032
            membrane lipid metabolic process 210
              sphingolipid metabolic process 154
                ceramide metabolic process 108
                  ganglioside metabolic process 28
                    ganglioside biosynthetic process 17
                      ganglioside biosynthetic process via lactosylceramide 7
paths to the root