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ONTOLOGY REPORT - ANNOTATIONS


Term:lipopolysaccharide binding
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Accession:GO:0001530 term browser browse the term
Definition:Binding to a lipopolysaccharide.
Synonyms:exact_synonym: LPS binding
 broad_synonym: endotoxin binding


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lipopolysaccharide binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07054352.2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:149,555,636...149,563,476 JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 enables ISO (MGI:4939876|PMID:21245295) RGD PMID:21245295 MGI:4939876 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Bpi bactericidal/permeability-increasing protein enables IDA
IBA
ISO
PMID:21873635
(PMID:8409400)
RGD PMID:8409400, PMID:15009116, PMID:21873635 RGD:1303979, RGD:13792537 NCBI chr 3:154,741,627...154,768,584
Ensembl chr 3:154,741,631...154,768,640
JBrowse link
G Bpifa2 BPI fold containing family A, member 2 enables ISO
IBA
(PMID:21833535)
PMID:21873635
RGD PMID:21833535, PMID:21873635 RGD:13792537 NCBI chr 3:149,492,612...149,501,614
Ensembl chr 3:149,493,655...149,501,613
JBrowse link
G Bpifa2f BPI fold containing family A, member 2F enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:149,521,040...149,533,252
Ensembl chr 3:149,524,667...149,533,248
JBrowse link
G Camp cathelicidin antimicrobial peptide enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518
JBrowse link
G Cd14 CD14 molecule enables IBA
ISO
PMID:21873635
(PMID:12594207)
RGD PMID:12594207, PMID:21873635 RGD:13792537 NCBI chr18:29,560,341...29,562,290
Ensembl chr18:29,560,365...29,562,153
JBrowse link
G Cd6 Cd6 molecule enables ISO (PMID:17601777) RGD PMID:17601777 NCBI chr 1:226,848,399...226,887,259
Ensembl chr 1:226,848,403...226,887,156
JBrowse link
G Defb15 defensin beta 15 enables ISO (PMID:24189797) RGD PMID:24189797 NCBI chr16:75,105,290...75,107,931
Ensembl chr16:75,105,290...75,107,931
Ensembl chr16:75,105,290...75,107,931
JBrowse link
G Defb24 defensin beta 24 enables IBA
ISO
PMID:21873635
(PMID:24449502)
RGD PMID:24449502, PMID:21873635 RGD:13792537 NCBI chr 3:148,051,364...148,057,497
Ensembl chr 3:148,051,263...148,057,523
JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 enables ISO (PMID:19189310) RGD PMID:19189310 NCBI chr 1:201,620,642...201,689,905
NCBI chr 1:203,149,414...203,228,705
JBrowse link
G Drosha drosha ribonuclease III enables ISO (PMID:20180804) RGD PMID:20180804 NCBI chr 2:62,887,267...63,000,307
Ensembl chr 2:62,887,267...62,999,572
JBrowse link
G F2 coagulation factor II enables ISO
IEA
(PMID:20421939)
GO_REF:0000107
RGD
Ensembl
PMID:20421939 GO_REF:0000107 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G Hist2h2be histone cluster 2 H2B family member E enables ISO (PMID:11859126) RGD PMID:11859126 NCBI chr 2:198,360,837...198,363,399
Ensembl chr 2:198,360,998...198,361,378
JBrowse link
G Hmgb1 high mobility group box 1 enables ISO (PMID:21660935) RGD PMID:21660935 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 enables ISO (PMID:17164250)
(MGI:3708392|PMID:17164250)
RGD PMID:17164250 MGI:3708392 NCBI chr 9:61,680,529...61,691,202
Ensembl chr 9:61,680,530...61,690,956
JBrowse link
G Lbp lipopolysaccharide binding protein enables IDA
ISO
IEA
IBA
(PMID:12594207), (PMID:24120359)
(MGI:1926636|PMID:11079463)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:11079463 PMID:12594207 PMID:24120359, PMID:22580761, PMID:21873635 GO_REF:0000107 MGI:1926636, RGD:9685189, RGD:13792537 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Ltf lactotransferrin enables ISO (PMID:9596699)
(PMID:15155221)
RGD PMID:9596699 PMID:15155221 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Ninj1 ninjurin 1 enables ISS
ISO
GO_REF:0000024
(MGI:6695680|PMID:26677008)
(PMID:26677008)
UniProt
RGD
PMID:26677008 GO_REF:0000024 MGI:6695680 NCBI chr17:15,866,235...15,881,284
Ensembl chr17:15,866,237...15,881,327
JBrowse link
G P2rx7 purinergic receptor P2X 7 enables ISO (MGI:2148354|PMID:11489964) RGD PMID:11489964 MGI:2148354 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Psma1 proteasome 20S subunit alpha 1 enables ISO (MGI:4419084|PMID:12874245) RGD PMID:12874245 MGI:4419084 NCBI chr 1:183,733,567...183,744,586
Ensembl chr 1:183,733,567...183,744,586
JBrowse link
G Psmb4 proteasome 20S subunit beta 4 enables IEA
ISO
GO_REF:0000107
(MGI:4419084|PMID:12874245)
Ensembl
RGD
PMID:12874245 GO_REF:0000107 MGI:4419084 NCBI chr 2:196,043,546...196,046,320
Ensembl chr 2:196,043,618...196,046,311
JBrowse link
G Ptafr platelet-activating factor receptor enables ISO (MGI:85738|PMID:9013981) RGD PMID:9013981 MGI:85738 NCBI chr 5:150,746,284...150,775,675
Ensembl chr 5:150,754,021...150,775,672
JBrowse link
G Rnase2 ribonuclease A family member 2 NOT|enables ISO (PMID:23992292) RGD PMID:23992292 NCBI chr15:28,154,482...28,155,291
Ensembl chr15:28,154,482...28,155,291
JBrowse link
G Rnase3 ribonuclease A family member 3 enables ISO (PMID:23992292) RGD PMID:23992292 NCBI chr15:28,216,744...28,217,614
Ensembl chr15:28,216,744...28,217,614
JBrowse link
G Scarb1 scavenger receptor class B, member 1 enables ISO (PMID:12651854) RGD PMID:12651854 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Selp selectin P enables IEA
ISO
GO_REF:0000107
(PMID:16514062)
Ensembl
RGD
PMID:16514062 GO_REF:0000107 NCBI chr13:82,428,914...82,464,629
Ensembl chr13:82,429,063...82,464,628
JBrowse link
G Sftpd surfactant protein D IDA RGD PMID:18092821 RGD:4143524 NCBI chr16:18,753,535...18,766,100
Ensembl chr16:18,745,458...18,766,174
JBrowse link
G Spon2 spondin 2 enables ISO (MGI:2686801|PMID:14691481) RGD PMID:14691481 MGI:2686801 NCBI chr14:82,815,158...82,824,529
Ensembl chr14:82,818,663...82,824,599
JBrowse link
G Tlr2 toll-like receptor 2 enables ISO (PMID:11274165) RGD PMID:11274165 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Tlr4 toll-like receptor 4 enables IDA
IBA
ISO
IEA
E. coli K12 LPS
PMID:21873635
(PMID:16514062)
GO_REF:0000107
RGD
Ensembl
PMID:16514062, PMID:16973131, PMID:21873635 GO_REF:0000107, RGD:1643119, RGD:13792537 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 enables ISO (MGI:5463560|PMID:19079182), (MGI:5572888|PMID:12847223) RGD PMID:12847223 PMID:19079182 MGI:5463560 MGI:5572888 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Tril TLR4 interactor with leucine-rich repeats enables ISO
IBA
(PMID:19710467)
PMID:21873635
RGD PMID:19710467, PMID:21873635 RGD:13792537 NCBI chr 4:83,967,695...83,972,540
Ensembl chr 4:83,967,696...83,972,540
JBrowse link
G Zranb2 zinc finger RANBP2-type containing 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:263,864,088...263,877,872
Ensembl chr 2:263,864,331...263,877,821
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  molecular_function 20086
    binding 17062
      carbohydrate derivative binding 2209
        lipopolysaccharide binding 34
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