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ONTOLOGY REPORT - ANNOTATIONS


Term:lipopolysaccharide binding
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Accession:GO:0001530 term browser browse the term
Definition:Interacting selectively and non-covalently with lipopolysaccharide.
Synonyms:exact_synonym: LPS binding
 broad_synonym: endotoxin binding


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lipopolysaccharide binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07054352.2 RGD:13792537
G Adgrb1 adhesion G protein-coupled receptor B1 JBrowse link 7 115,766,484 115,828,514 RGD:1624291
G Bpi bactericidal/permeability-increasing protein JBrowse link 3 154,741,627 154,768,584 RGD:1303979
RGD:13792537
RGD:1624291
G Bpifa2 BPI fold containing family A, member 2 JBrowse link 3 149,492,612 149,501,614 RGD:1624291
RGD:13792537
G Bpifa2f BPI fold containing family A, member 2F JBrowse link 3 149,521,040 149,533,252 RGD:13792537
G Camp cathelicidin antimicrobial peptide JBrowse link 8 117,930,557 117,932,371 RGD:13792537
G Cd14 CD14 molecule JBrowse link 18 29,560,341 29,562,290 RGD:1624291
RGD:13792537
G Cd6 Cd6 molecule JBrowse link 1 226,848,399 226,887,259 RGD:1624291
G Defb15 defensin beta 15 JBrowse link 16 75,105,290 75,107,931 RGD:1624291
G Defb24 defensin beta 24 JBrowse link 3 148,051,364 148,057,497 RGD:1624291
RGD:13792537
G Dmbt1 deleted in malignant brain tumors 1 JBrowse link 1
1
201,620,642
203,149,414
201,689,905
203,228,705
RGD:1624291
G Drosha drosha ribonuclease III JBrowse link 2 62,887,267 63,000,307 RGD:1624291
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:1600115
RGD:1624291
G Hist2h2be histone cluster 2 H2B family member E JBrowse link 2 198,360,837 198,363,399 RGD:1624291
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:1624291
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:1624291
G Lbp lipopolysaccharide binding protein JBrowse link 3 154,786,232 154,812,910 RGD:1624291
RGD:13792537
RGD:1600115
RGD:9685189
G Ltf lactotransferrin JBrowse link 8 119,290,416 119,313,261 RGD:1624291
G P2rx7 purinergic receptor P2X 7 JBrowse link 12 39,353,613 39,396,042 RGD:1624291
G Psma1 proteasome 20S subunit alpha 1 JBrowse link 1 183,733,567 183,744,586 RGD:1624291
G Psmb4 proteasome 20S subunit beta 4 JBrowse link 2 196,043,546 196,046,320 RGD:1600115
RGD:1624291
G Ptafr platelet-activating factor receptor JBrowse link 5 150,746,284 150,775,675 RGD:1624291
G Rnase2 ribonuclease A family member 2 JBrowse link 15 28,154,482 28,155,291 RGD:1624291
G Rnase3 ribonuclease A family member 3 JBrowse link 15 28,216,744 28,217,614 RGD:1624291
G Scarb1 scavenger receptor class B, member 1 JBrowse link 12 36,694,952 36,761,445 RGD:1624291
G Selp selectin P JBrowse link 13 82,428,914 82,464,629 RGD:1624291
RGD:1600115
G Sftpd surfactant protein D JBrowse link 16 18,753,535 18,766,100 RGD:4143524
G Spon2 spondin 2 JBrowse link 14 82,815,158 82,824,529 RGD:1624291
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:1624291
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:1643119
RGD:13792537
RGD:1600115
RGD:1624291
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:1624291
G Tril TLR4 interactor with leucine-rich repeats JBrowse link 4 83,967,695 83,972,540 RGD:1624291
RGD:13792537
G Zranb2 zinc finger RANBP2-type containing 2 JBrowse link 2 263,864,088 263,877,872 RGD:13792537

Term paths to the root
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  molecular_function 20215
    binding 16743
      carbohydrate derivative binding 2229
        lipopolysaccharide binding 33
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.