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ONTOLOGY REPORT - ANNOTATIONS


Term:retinoid metabolic process
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Accession:GO:0001523 term browser browse the term
Definition:The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
Synonyms:exact_synonym: retinoid metabolism


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retinoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in ISO (PMID:16787387), (PMID:9600267) UniProt PMID:9600267 PMID:16787387 NCBI chrNW_004936520:3,467,003...3,489,754 JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B involved_in ISO (PMID:12732097) UniProt PMID:12732097 NCBI chrNW_004936579:1,312,175...1,328,397 JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 involved_in ISO PMID:7832787 UniProt PMID:7832787 RGD:11558002 NCBI chrNW_004936503:8,869,073...8,953,726 JBrowse link
G Bco1 beta-carotene oxygenase 1 involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936475:28,859,222...28,890,407 JBrowse link
G Bco2 beta-carotene oxygenase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936612:2,262,115...2,294,287 JBrowse link
G Dhrs3 dehydrogenase/reductase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5528782|PMID:24005908) MGI
Ensembl
PMID:24005908 GO_REF:0000107 MGI:5528782 NCBI chrNW_004936474:1,237,177...1,270,299 JBrowse link
G LOC101965278 retinol dehydrogenase 16 acts_upstream_of_or_within ISO (MGI:2153599|PMID:11562362) MGI PMID:11562362 MGI:2153599 NCBI chrNW_004936646:1,195,200...1,200,778 JBrowse link
G LOC101969767 all-trans-retinol dehydrogenase [NAD(+)] ADH4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,763,849...3,777,177 JBrowse link
G LOC101976546 alcohol dehydrogenase E chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,508,821...3,552,938 JBrowse link
G LOC101977100 alcohol dehydrogenase class-3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,795,214...3,810,732 JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:5,949,161...5,952,367 JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:11,065,946...11,082,104 JBrowse link
G Rdh5 retinol dehydrogenase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:191,136...195,279 JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in IEA Ensembl
UniProt
GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936591:3,347,346...3,368,062 JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) MGI PMID:11876656 MGI:2662611 NCBI chrNW_004936503:8,869,073...8,953,726 JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2662611|PMID:11876656) MGI
Ensembl
PMID:11876656 GO_REF:0000107 MGI:2662611 NCBI chrNW_004936471:19,175,997...19,263,335 JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family member A1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2662611|PMID:11876656) MGI
Ensembl
PMID:11876656 GO_REF:0000107 MGI:2662611 NCBI chrNW_004936560:2,562,394...2,580,261 JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:10,465,701...10,487,534 JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chrNW_004936471:33,682,730...33,688,332 JBrowse link
9-cis-retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:17167544 RGD:2306320 NCBI chrNW_004936503:8,869,073...8,953,726 JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prmt3 protein arginine methyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936654:1,336,546...1,464,959 JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965278 retinol dehydrogenase 16 ISO RGD PMID:21138835 RGD:6771354 NCBI chrNW_004936646:1,195,200...1,200,778 JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO RGD PMID:21138835 RGD:6771354 NCBI chrNW_004936648:2,060,131...2,088,021 JBrowse link
regulation of vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgat1 diacylglycerol O-acyltransferase 1 ISO RGD PMID:18000880 RGD:10400849 NCBI chrNW_004936470:7,916,438...7,926,089 JBrowse link
G Isx intestine specific homeobox acts_upstream_of_or_within ISO (MGI:3775349|PMID:18093975) MGI PMID:18093975 MGI:3775349 NCBI chrNW_004936492:5,245,211...5,265,419 JBrowse link
retinal metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:4,969,456...5,326,682 JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2655944|PMID:12610736) MGI
Ensembl
PMID:12610736 GO_REF:0000107 MGI:2655944 NCBI chrNW_004936471:19,175,997...19,263,335 JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:2,930,781...2,967,309 JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:2,562,394...2,580,261 JBrowse link
G Bco1 beta-carotene oxygenase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5638293|PMID:25701869) MGI
Ensembl
PMID:25701869 GO_REF:0000107 MGI:5638293 NCBI chrNW_004936475:28,859,222...28,890,407 JBrowse link
G Bco2 beta-carotene oxygenase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5638293|PMID:25701869) MGI
Ensembl
PMID:25701869 GO_REF:0000107 MGI:5638293 NCBI chrNW_004936612:2,262,115...2,294,287 JBrowse link
G LOC101969633 dehydrogenase/reductase SDR family member 4-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:481,510...493,330 JBrowse link
G LOC101970041 short chain dehydrogenase/reductase family 16C member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:2,919,611...2,937,274 JBrowse link
G LOC101970101 cytochrome P450 1B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936663:345,021...355,188 JBrowse link
G LOC101970102 cytochrome P450 27C1 involved_in ISO (PMID:27059013) UniProt PMID:27059013 NCBI chrNW_004936469:44,016,925...44,042,569 JBrowse link
G Rbp4 retinol binding protein 4 acts_upstream_of_or_within ISO (MGI:2150869|PMID:11562477) MGI PMID:11562477 MGI:2150869 NCBI chrNW_004936601:1,401,215...1,410,195 JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936648:2,060,131...2,088,021 JBrowse link
G Rdh11 retinol dehydrogenase 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12807874) MGI
Ensembl
PMID:12807874 GO_REF:0000107 NCBI chrNW_004936495:11,065,946...11,082,104 JBrowse link
G Rdh13 retinol dehydrogenase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:356,068...368,525 JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2180434|PMID:11897783) RGD
Ensembl
MGI
PMID:11897783 PMID:21785167 GO_REF:0000107 MGI:2180434 RGD:6893661 NCBI chrNW_004936591:3,347,346...3,368,062 JBrowse link
retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:21138835 RGD:6771354 NCBI chrNW_004936503:8,869,073...8,953,726 JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 involved_in ISO
IEA
RGD
Ensembl
PMID:15950969 PMID:21138835 GO_REF:0000107 RGD:6771322 RGD:6771354 NCBI chrNW_004936471:19,175,997...19,263,335 JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1927016|PMID:11044606), (MGI:3055622|PMID:11013254), (MGI:3692370|PMID:16241904) RGD
Ensembl
MGI
PMID:11013254 PMID:11044606 PMID:15950969 PMID:16241904 PMID:21138835 GO_REF:0000107 MGI:1927016 MGI:3055622 MGI:3692370 RGD:6771322 RGD:6771354 NCBI chrNW_004936483:2,930,781...2,967,309 JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 ISO RGD PMID:15950969 RGD:6771322 NCBI chrNW_004936580:5,861,051...5,866,818 JBrowse link
G Dhrs9 dehydrogenase/reductase 9 ISO RGD PMID:15950969 PMID:21138835 RGD:6771322 RGD:6771354 NCBI chrNW_004936469:10,465,701...10,487,534 JBrowse link
G Rbp1 retinol binding protein 1 involved_in ISO
IEA
RGD
InterPro
PMID:15950969 GO_REF:0000002 RGD:6771322 NCBI chrNW_004936540:1,600,673...1,626,573 JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709664|PMID:17473173) MGI
InterPro
Ensembl
PMID:17473173 GO_REF:0000002 GO_REF:0000107 MGI:3709664 NCBI chrNW_004936648:2,060,131...2,088,021 JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crabp1 cellular retinoic acid binding protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936471:36,665,641...36,672,626 JBrowse link
G LOC101970215 cytochrome P450 2W1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936754:1,203,004...1,208,131 JBrowse link
G LOC101975674 cytochrome P450 26B1 involved_in ISO
IEA
RGD
Ensembl
PMID:21138835 GO_REF:0000107 RGD:6771354 NCBI chrNW_004936491:16,010,394...16,028,852 JBrowse link
G LOC101977861 cytochrome P450 26A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:1,810,572...1,815,927 JBrowse link
G LOC101978131 cytochrome P450 26C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:1,818,037...1,828,400 JBrowse link
retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1338643|PMID:10358022), (MGI:1340177|PMID:10402668) MGI
Ensembl
PMID:10358022 PMID:10402668 GO_REF:0000107 MGI:1338643 MGI:1340177 NCBI chrNW_004936520:3,467,003...3,489,754 JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (MGI:3608158|PMID:16207763)
(MGI:1336449|PMID:10191271)
(MGI:2664447|PMID:12808103), (MGI:2675573|PMID:12851412)
MGI PMID:10191271 PMID:12808103 PMID:12851412 PMID:16207763 MGI:1336449 MGI:2664447 MGI:2675573 MGI:3608158 NCBI chrNW_004936503:8,869,073...8,953,726 JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:2681052|PMID:14623241)
(MGI:3612223|PMID:16368932)
(MGI:83148|PMID:8797830)
RGD
Ensembl
MGI
PMID:8797830 PMID:12547725 PMID:14623241 PMID:16368932 GO_REF:0000107 MGI:2681052 MGI:3612223 MGI:83148 RGD:1576367 NCBI chrNW_004936471:19,175,997...19,263,335 JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608158|PMID:16207763)
(MGI:3701419|PMID:17207476)
MGI
Ensembl
PMID:16207763 PMID:17207476 GO_REF:0000107 MGI:3608158 MGI:3701419 NCBI chrNW_004936483:2,930,781...2,967,309 JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:2,562,394...2,580,261 JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1313226|PMID:9826179) MGI
Ensembl
PMID:9826179 GO_REF:0000107 MGI:1313226 NCBI chrNW_004936580:5,861,051...5,866,818 JBrowse link
G LOC101965278 retinol dehydrogenase 16 ISO RGD PMID:7499345 RGD:1299624 NCBI chrNW_004936646:1,195,200...1,200,778 JBrowse link
G LOC101967606 cytochrome P450 2S1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,642,674...3,652,697 JBrowse link
G LOC101970102 cytochrome P450 27C1 involved_in ISO (PMID:27059013) UniProt PMID:27059013 NCBI chrNW_004936469:44,016,925...44,042,569 JBrowse link
G LOC101975674 cytochrome P450 26B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:16,010,394...16,028,852 JBrowse link
G LOC101976546 alcohol dehydrogenase E chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,508,821...3,552,938 JBrowse link
G LOC101977861 cytochrome P450 26A1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3522528|PMID:15531370) MGI
Ensembl
PMID:15531370 GO_REF:0000107 MGI:3522528 NCBI chrNW_004936601:1,810,572...1,815,927 JBrowse link
G Rbp1 retinol binding protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3510590|PMID:15193143) MGI
Ensembl
PMID:15193143 GO_REF:0000107 MGI:3510590 NCBI chrNW_004936540:1,600,673...1,626,573 JBrowse link
G Scpep1 serine carboxypeptidase 1 ISO RGD PMID:11447226 RGD:70518 NCBI chrNW_004936490:5,903,884...5,939,953 JBrowse link
retinol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1338643|PMID:10358022), (MGI:1340177|PMID:10402668) RGD
Ensembl
MGI
PMID:10358022 PMID:10402668 PMID:10829036 GO_REF:0000107 MGI:1338643 MGI:1340177 RGD:631904 NCBI chrNW_004936520:3,467,003...3,489,754 JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (MGI:2675573|PMID:12851412) MGI PMID:12851412 MGI:2675573 NCBI chrNW_004936503:8,869,073...8,953,726 JBrowse link
G Awat2 acyl-CoA wax alcohol acyltransferase 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936777:1,562,900...1,574,018 JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936470:7,916,438...7,926,089 JBrowse link
G Dhrs3 dehydrogenase/reductase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936474:1,237,177...1,270,299 JBrowse link
G Lipe lipase E, hormone sensitive type involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936706:122,939...139,506 JBrowse link
G LOC101961588 cytochrome P450 2D17 involved_in ISO (PMID:10681376) UniProt PMID:10681376 NCBI chrNW_004936718:153,340...157,966 JBrowse link
G LOC101965278 retinol dehydrogenase 16 ISO RGD PMID:7499345 RGD:1299624 NCBI chrNW_004936646:1,195,200...1,200,778 JBrowse link
G LOC101966596 dehydrogenase/reductase SDR family member 7 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936495:4,341,261...4,358,279 JBrowse link
G LOC101969148 cytochrome P450 1A1 involved_in IEA Ensembl
UniProt
GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936471:33,682,730...33,688,332 JBrowse link
G LOC101969421 cytochrome P450 1A2 involved_in IEA UniProt
Ensembl
GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936471:33,704,616...33,709,455 JBrowse link
G LOC101969767 all-trans-retinol dehydrogenase [NAD(+)] ADH4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,763,849...3,777,177 JBrowse link
G LOC101970041 short chain dehydrogenase/reductase family 16C member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:2,919,611...2,937,274 JBrowse link
G LOC101970101 cytochrome P450 1B1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936663:345,021...355,188 JBrowse link
G LOC101970102 cytochrome P450 27C1 involved_in ISO (PMID:27059013), (PMID:28701464) UniProt PMID:27059013 PMID:28701464 NCBI chrNW_004936469:44,016,925...44,042,569 JBrowse link
G LOC101971467 pancreatic triacylglycerol lipase-like involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936486:6,486,381...6,498,578 JBrowse link
G LOC101976546 alcohol dehydrogenase E chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,508,821...3,552,938 JBrowse link
G Lrat lecithin retinol acyltransferase involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3775853|PMID:18093970) RGD
InterPro
Ensembl
MGI
PMID:2253789 PMID:8460936 PMID:9244401 PMID:14642897 PMID:18093970 GO_REF:0000002 GO_REF:0000107 MGI:3775853 RGD:1599829 RGD:1599831 RGD:1599832 RGD:6484737 NCBI chrNW_004936576:1,491,480...1,498,568 JBrowse link
G Plb1 phospholipase B1 ISO RGD PMID:8117729 RGD:6903951 NCBI chrNW_004936493:4,112,632...4,210,882 JBrowse link
G Pnpla4 patatin like phospholipase domain containing 4 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936644:1,091,794...1,113,621 JBrowse link
G Rbp1 retinol binding protein 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3510590|PMID:15193143)
(MGI:3510590|PMID:15193143), (MGI:3575475|PMID:15765518)
RGD
Ensembl
MGI
PMID:14642897 PMID:15193143 PMID:15765518 GO_REF:0000107 MGI:3510590 MGI:3575475 RGD:6484737 NCBI chrNW_004936540:1,600,673...1,626,573 JBrowse link
G Rbp4 retinol binding protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3775853|PMID:18093970) MGI
Ensembl
PMID:18093970 GO_REF:0000107 MGI:3775853 NCBI chrNW_004936601:1,401,215...1,410,195 JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in IEA UniProt
Ensembl
GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936648:2,060,131...2,088,021 JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:11,065,946...11,082,104 JBrowse link
G Rdh12 retinol dehydrogenase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:11,111,247...11,121,976 JBrowse link
G Rdh13 retinol dehydrogenase 13 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936886:356,068...368,525 JBrowse link
G Rdh14 retinol dehydrogenase 14 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5618338|PMID:25533474) MGI
Ensembl
PMID:25533474 GO_REF:0000107 MGI:5618338
G Rdh8 retinol dehydrogenase 8 acts_upstream_of_or_within ISO (MGI:3584232|PMID:15755727) MGI PMID:15755727 MGI:3584232 NCBI chrNW_004936659:439,541...445,645 JBrowse link
G Retsat retinol saturase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,826,813...1,837,048 JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO
IEA
RGD
GOC
PMID:3603006 GO_REF:0000108 RGD:9585656 NCBI chrNW_004936591:3,347,346...3,368,062 JBrowse link
G Ttr transthyretin involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936682:1,628,489...1,635,495 JBrowse link
vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrat lecithin retinol acyltransferase involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1928450|PMID:11108736) RGD
Ensembl
MGI
PMID:2253789 PMID:8460936 PMID:9244401 PMID:11108736 GO_REF:0000107 MGI:1928450 RGD:1599829 RGD:1599831 RGD:1599832 NCBI chrNW_004936576:1,491,480...1,498,568 JBrowse link
G Ppard peroxisome proliferator activated receptor delta ISO RGD PMID:12576510 RGD:1625187 NCBI chrNW_004936476:23,799,285...23,886,606 JBrowse link
G Rbp1 retinol binding protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936540:1,600,673...1,626,573 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14993
    metabolic process 9448
      cellular metabolic process 7936
        cellular lipid metabolic process 845
          isoprenoid metabolic process 90
            terpenoid metabolic process 70
              diterpenoid metabolic process 62
                retinoid metabolic process 54
                  retinal metabolic process 15
                  retinoic acid metabolic process + 21
                  retinol metabolic process 31
                  vitamin A metabolic process + 5
Path 2
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  biological_process 14993
    metabolic process 9448
      primary metabolic process 8514
        lipid metabolic process 1164
          cellular lipid metabolic process 845
            isoprenoid metabolic process 90
              terpenoid metabolic process 70
                diterpenoid metabolic process 62
                  retinoid metabolic process 54
                    retinal metabolic process 15
                    retinoic acid metabolic process + 21
                    retinol metabolic process 31
                    vitamin A metabolic process + 5
paths to the root