ONTOLOGY REPORT - ANNOTATIONS
Term: retinoid metabolic process
Accession: GO:0001523
browse the term
Definition: The chemical reactions and pathways involving retinoids, any member of a class of isoprenoids that contain or are derived from four prenyl groups linked head-to-tail. Retinoids include retinol and retinal and structurally similar natural derivatives or synthetic compounds, but need not have vitamin A activity.
Synonyms: exact_synonym: retinoid metabolism
G
Adh1
alcohol dehydrogenase 1 (class I)
acts_upstream_of_or_within
IMP
(MGI:2180234|PMID:12027900)
MGI
PMID:12027900
MGI:2180234
NCBI chr 3:137,983,346...137,996,459
Ensembl chr 3:137,966,752...137,996,459
G
Adh4
alcohol dehydrogenase 4 (class II), pi polypeptide
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 3:138,121,217...138,138,444
Ensembl chr 3:138,121,227...138,136,653
G
Adh5
alcohol dehydrogenase 5 (class III), chi polypeptide
acts_upstream_of_or_within
IMP
(MGI:2180234|PMID:12027900)
MGI
PMID:12027900
MGI:2180234
NCBI chr 3:138,142,961...138,161,260
Ensembl chr 3:138,148,854...138,161,260
G
Adh7
alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 3:137,903,828...137,937,803
Ensembl chr 3:137,923,521...137,939,143
G
Akr1b10
aldo-keto reductase family 1, member B10 (aldose reductase)
involved_in
ISO
(PMID:12732097)
UniProt
PMID:12732097
NCBI chr 6:34,361,182...34,373,884
Ensembl chr 6:34,361,153...34,373,885
G
Akr1b3
aldo-keto reductase family 1, member B3 (aldose reductase)
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 6:34,280,865...34,294,424
Ensembl chr 6:34,279,369...34,294,413
G
Aldh1a1
aldehyde dehydrogenase family 1, subfamily A1
involved_in
ISO
MGI
GO_REF:0000096 MGI:4417868
NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829
G
Aldh1a2
aldehyde dehydrogenase family 1, subfamily A2
involved_in
TAS
(MGI:4943617|PMID:20299672)
DFLAT
PMID:20299672
MGI:4943617
NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525
G
Bco1
beta-carotene oxygenase 1
involved_in
IDA ISO
(MGI:1931377|PMID:11092891)
UniProt MGI
PMID:11092891
GO_REF:0000096 MGI:1931377 MGI:4417868 MGI:4834177
NCBI chr 8:117,822,590...117,860,459
Ensembl chr 8:117,822,593...117,860,459
G
Cyp2j6
cytochrome P450, family 2, subfamily j, polypeptide 6
involved_in
ISO
MGI
GO_REF:0000096 MGI:4417868
NCBI chr 4:96,404,375...96,452,513
Ensembl chr 4:96,404,375...96,441,898
G
Cyp2j9
cytochrome P450, family 2, subfamily j, polypeptide 9
ISO
RGD
PMID:9606960
RGD:1625388
NCBI chr 4:96,456,661...96,480,748
Ensembl chr 4:96,456,666...96,479,815
G
Dhrs3
dehydrogenase/reductase (SDR family) member 3
involved_in acts_upstream_of_or_within
IBA IMP
(MGI:6201960|PMID:21873635) (MGI:5528782|PMID:24005908)
GO_Central MGI
PMID:21873635 PMID:24005908
MGI:5528782 MGI:6201960
NCBI chr 4:144,618,712...144,654,779
Ensembl chr 4:144,619,397...144,654,779
G
Dhrs4
dehydrogenase/reductase (SDR family) member 4
involved_in
ISO
(PMID:12604222)
UniProt
PMID:12604222
NCBI chr14:55,715,880...55,727,797
Ensembl chr14:55,716,215...55,727,797
G
Rarres2
retinoic acid receptor responder (tazarotene induced) 2
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 6:48,546,630...48,549,778
Ensembl chr 6:48,546,630...48,549,723
G
Rbp2
retinol binding protein 2, cellular
acts_upstream_of_or_within
TAS
(MGI:1929306|PMID:11022035)
MGI
PMID:11022035
MGI:1929306
NCBI chr 9:98,372,590...98,391,824
Ensembl chr 9:98,368,168...98,391,834
G
Rdh1
retinol dehydrogenase 1 (all trans)
acts_upstream_of_or_within
IDA
(MGI:2153599|PMID:11562362)
MGI
PMID:11562362
MGI:2153599
NCBI chr10:127,595,595...127,604,168
Ensembl chr10:127,595,590...127,604,166
G
Rdh11
retinol dehydrogenase 11
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr12:79,221,007...79,238,629
Ensembl chr12:79,221,111...79,239,067
G
Rdh16
retinol dehydrogenase 16
involved_in
IDA
(MGI:1101408|PMID:9407098)
UniProt
PMID:9407098
MGI:1101408
NCBI chr10:127,636,959...127,651,715
Ensembl chr10:127,637,021...127,682,434
G
Rdh5
retinol dehydrogenase 5
involved_in
ISO IBA IDA
(MGI:6201960|PMID:21873635) (MGI:1350674|PMID:10588954)
MGI GO_Central UniProt
PMID:10588954 PMID:21873635
GO_REF:0000096 MGI:1350674 MGI:4834177 MGI:6201960
NCBI chr10:128,749,457...128,755,906
Ensembl chr10:128,749,462...128,758,757
G
Rpe65
retinal pigment epithelium 65
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 3:159,304,712...159,330,944
Ensembl chr 3:159,304,812...159,330,958
G
Aldh1a1
aldehyde dehydrogenase family 1, subfamily A1
acts_upstream_of_or_within
IDA
(MGI:2662611|PMID:11876656)
MGI
PMID:11876656
MGI:2662611
NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829
G
Aldh1a2
aldehyde dehydrogenase family 1, subfamily A2
acts_upstream_of_or_within
IDA
(MGI:2662611|PMID:11876656)
MGI
PMID:11876656
MGI:2662611
NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525
G
Aldh8a1
aldehyde dehydrogenase 8 family, member A1
acts_upstream_of_or_within
IDA
(MGI:2662611|PMID:11876656)
MGI
PMID:11876656
MGI:2662611
NCBI chr10:21,253,199...21,272,477
Ensembl chr10:21,253,190...21,272,484
G
Cyp1a1
cytochrome P450, family 1, subfamily a, polypeptide 1
involved_in
ISO
9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal
RGD MGI
PMID:8765131
GO_REF:0000096 MGI:4417868 RGD:2306683
NCBI chr 9:57,595,211...57,611,107
Ensembl chr 9:57,595,211...57,611,107
G
Dhrs9
dehydrogenase/reductase (SDR family) member 9
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 2:69,210,806...69,233,430
Ensembl chr 2:69,210,789...69,234,877
G
Rdh16
retinol dehydrogenase 16
acts_upstream_of_or_within
IDA
(MGI:2662611|PMID:11876656)
MGI
PMID:11876656
MGI:2662611
NCBI chr10:127,636,959...127,651,715
Ensembl chr10:127,637,021...127,682,434
G
Rdh9
retinol dehydrogenase 9
acts_upstream_of_or_within
IDA
(MGI:2662611|PMID:11876656)
MGI
PMID:11876656
MGI:2662611
NCBI chr10:127,612,274...127,628,566
Ensembl chr10:127,612,255...127,628,566
G
Aldh1a1
aldehyde dehydrogenase family 1, subfamily A1
involved_in
ISO
RGD MGI
PMID:17167544
GO_REF:0000096 MGI:4417868 RGD:2306320
NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829
G
Akr1c14
aldo-keto reductase family 1, member C14
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr13:4,099,015...4,140,569
Ensembl chr13:4,099,011...4,140,688
G
Akr1c18
aldo-keto reductase family 1, member C18
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr13:4,182,614...4,200,645
Ensembl chr13:4,182,614...4,200,653
G
Akr1c20
aldo-keto reductase family 1, member C20
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr13:4,536,855...4,573,353
Ensembl chr13:4,536,848...4,573,344
G
Akr1c6
aldo-keto reductase family 1, member C6
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr13:4,484,310...4,507,529
Ensembl chr13:4,484,305...4,507,876
G
Akr1cl
aldo-keto reductase family 1, member C-like
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 1:65,052,237...65,071,918
Ensembl chr 1:65,051,848...65,071,918
G
Prmt3
protein arginine N-methyltransferase 3
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 7:49,428,067...49,508,016
Ensembl chr 7:49,428,094...49,508,013
G
Rdh1
retinol dehydrogenase 1 (all trans)
involved_in
ISO
MGI
GO_REF:0000096 MGI:4417868
NCBI chr10:127,595,595...127,604,168
Ensembl chr10:127,595,590...127,604,166
G
Rdh10
retinol dehydrogenase 10 (all-trans)
involved_in
ISO
RGD MGI
PMID:21138835
GO_REF:0000096 MGI:4417868 RGD:6771354
NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958
G
Rdh16
retinol dehydrogenase 16
involved_in
ISO
RGD MGI
PMID:21138835
GO_REF:0000096 MGI:4417868 RGD:6771354
NCBI chr10:127,636,959...127,651,715
Ensembl chr10:127,637,021...127,682,434
G
Rdh16f2
RDH16 family member 2
involved_in
ISO
MGI
GO_REF:0000096 MGI:4417868
NCBI chr10:127,702,345...127,713,188
Ensembl chr10:127,702,343...127,713,186
G
Rdh19
retinol dehydrogenase 19
involved_in
ISO
MGI
GO_REF:0000096 MGI:4417868
NCBI chr10:127,685,797...127,697,045
Ensembl chr10:127,685,797...127,697,045
G
Rdh9
retinol dehydrogenase 9
involved_in
ISO
MGI
GO_REF:0000096 MGI:4417868
NCBI chr10:127,612,274...127,628,566
Ensembl chr10:127,612,255...127,628,566
G
Dgat1
diacylglycerol O-acyltransferase 1
involved_in
ISO
RGD MGI
PMID:18000880
GO_REF:0000096 MGI:4417868 RGD:10400849
NCBI chr15:76,386,212...76,396,225
Ensembl chr15:76,386,215...76,396,153
G
Isx
intestine specific homeobox
acts_upstream_of_or_within
IMP
(MGI:3775349|PMID:18093975)
MGI
PMID:18093975
MGI:3775349
NCBI chr 8:75,599,802...75,620,134
Ensembl chr 8:75,599,801...75,620,134
G
Abca4
ATP-binding cassette, sub-family A (ABC1), member 4
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 3:121,837,547...121,973,719
Ensembl chr 3:121,838,092...121,973,772
G
Akr1b10
aldo-keto reductase family 1, member B10 (aldose reductase)
ISO
RGD
PMID:20709016
RGD:6903952
NCBI chr 6:34,361,182...34,373,884
Ensembl chr 6:34,361,153...34,373,885
G
Akr1c14
aldo-keto reductase family 1, member C14
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr13:4,099,015...4,140,569
Ensembl chr13:4,099,011...4,140,688
G
Akr1c18
aldo-keto reductase family 1, member C18
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr13:4,182,614...4,200,645
Ensembl chr13:4,182,614...4,200,653
G
Akr1c20
aldo-keto reductase family 1, member C20
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr13:4,536,855...4,573,353
Ensembl chr13:4,536,848...4,573,344
G
Akr1c6
aldo-keto reductase family 1, member C6
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr13:4,484,310...4,507,529
Ensembl chr13:4,484,305...4,507,876
G
Akr1cl
aldo-keto reductase family 1, member C-like
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 1:65,052,237...65,071,918
Ensembl chr 1:65,051,848...65,071,918
G
Aldh1a2
aldehyde dehydrogenase family 1, subfamily A2
acts_upstream_of_or_within
IDA
(MGI:2655944|PMID:12610736)
MGI
PMID:12610736
MGI:2655944
NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525
G
Aldh1a3
aldehyde dehydrogenase family 1, subfamily A3
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265
G
Aldh8a1
aldehyde dehydrogenase 8 family, member A1
acts_upstream_of_or_within involved_in
IC ISO
(MGI:2652953|PMID:12519776)
MGI
PMID:12519776
GO_REF:0000096 MGI:2652953 MGI:4834177
NCBI chr10:21,253,199...21,272,477
Ensembl chr10:21,253,190...21,272,484
G
Bco1
beta-carotene oxygenase 1
involved_in acts_upstream_of_or_within
IBA IMP ISO IGI
(MGI:6201960|PMID:21873635) (MGI:3587559|PMID:15951442) (MGI:5638293|PMID:25701869)
GO_Central UniProt MGI
PMID:15951442 PMID:21873635 PMID:25701869
GO_REF:0000096 MGI:3587559 MGI:4834177 MGI:5638293 MGI:6201960
NCBI chr 8:117,822,590...117,860,459
Ensembl chr 8:117,822,593...117,860,459
G
Bco2
beta-carotene oxygenase 2
acts_upstream_of_or_within involved_in
IGI NAS IBA
(MGI:5638293|PMID:25701869) (MGI:2159483|PMID:11278918) (MGI:6201960|PMID:21873635)
MGI UniProt GO_Central
PMID:11278918 PMID:21873635 PMID:25701869
MGI:2159483 MGI:5638293 MGI:6201960
NCBI chr 9:50,444,387...50,466,513
Ensembl chr 9:50,444,387...50,466,481
G
Cyp1b1
cytochrome P450, family 1, subfamily b, polypeptide 1
involved_in
IDA ISO
(MGI:5572883|PMID:15258110)
UniProt MGI
PMID:15258110
GO_REF:0000096 MGI:4834177 MGI:5572883
NCBI chr17:80,014,369...80,022,490
Ensembl chr17:80,008,966...80,022,490
G
Dhrs13
dehydrogenase/reductase (SDR family) member 13
involved_in
IBA
(MGI:6201960|PMID:21873635)
GO_Central
PMID:21873635
MGI:6201960
NCBI chr11:77,923,139...77,928,690
Ensembl chr11:77,923,106...77,928,692
G
Dhrs4
dehydrogenase/reductase (SDR family) member 4
acts_upstream_of_or_within involved_in
IDA IBA
(MGI:2655870|PMID:12680773) (MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:12680773 PMID:21873635
MGI:2655870 MGI:6201960
NCBI chr14:55,715,880...55,727,797
Ensembl chr14:55,716,215...55,727,797
G
Rbp4
retinol binding protein 4, plasma
acts_upstream_of_or_within
IMP
(MGI:2150869|PMID:11562477)
MGI
PMID:11562477
MGI:2150869
NCBI chr19:38,105,068...38,113,769
Ensembl chr19:38,105,077...38,113,729
G
Rdh10
retinol dehydrogenase 10 (all-trans)
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958
G
Rdh11
retinol dehydrogenase 11
acts_upstream_of_or_within
ISO
(MGI:2673050|PMID:12807874)
MGI
PMID:12807874
MGI:2673050
NCBI chr12:79,221,007...79,238,629
Ensembl chr12:79,221,111...79,239,067
G
Rdh13
retinol dehydrogenase 13 (all-trans and 9-cis)
involved_in
IBA ISO
(MGI:6201960|PMID:21873635)
GO_Central MGI
PMID:21873635
GO_REF:0000096 MGI:4834177 MGI:6201960
NCBI chr 7:4,428,664...4,474,279
Ensembl chr 7:4,427,769...4,448,648
G
Rpe65
retinal pigment epithelium 65
acts_upstream_of_or_within involved_in
IMP ISO
(MGI:2180434|PMID:11897783)
MGI RGD
PMID:11897783 PMID:21785167
GO_REF:0000096 MGI:2180434 MGI:4417868 RGD:6893661
NCBI chr 3:159,304,712...159,330,944
Ensembl chr 3:159,304,812...159,330,958
G
Sdr16c5
short chain dehydrogenase/reductase family 16C, member 5
involved_in
ISO IBA
(MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:21873635
GO_REF:0000096 MGI:4834177 MGI:6201960
NCBI chr 4:3,995,942...4,019,663
Ensembl chr 4:3,995,936...4,019,663
G
Aldh1a1
aldehyde dehydrogenase family 1, subfamily A1
involved_in
ISO
RGD MGI
PMID:21138835
GO_REF:0000096 MGI:4417868 RGD:6771354
NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829
G
Aldh1a2
aldehyde dehydrogenase family 1, subfamily A2
involved_in
ISO
MGI RGD
PMID:15950969 PMID:21138835
GO_REF:0000096 MGI:4417868 MGI:4834177 RGD:6771322 RGD:6771354
NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525
G
Aldh1a3
aldehyde dehydrogenase family 1, subfamily A3
involved_in acts_upstream_of_or_within
ISO IMP IDA
(MGI:3042765|PMID:14623956) (MGI:1927016|PMID:11044606), (MGI:3055622|PMID:11013254), (MGI:3692370|PMID:16241904)
MGI RGD UniProt
PMID:11013254 PMID:11044606 PMID:14623956 PMID:15950969 PMID:16241904 PMID:21138835 More...
GO_REF:0000096 MGI:1927016 MGI:3042765 MGI:3055622 MGI:3692370 MGI:4417868 MGI:4834177 RGD:6771322 RGD:6771354
NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265
G
Crabp2
cellular retinoic acid binding protein II
ISO
RGD
PMID:15950969
RGD:6771322
NCBI chr 3:87,856,000...87,860,679
Ensembl chr 3:87,855,973...87,860,683
G
Dhrs9
dehydrogenase/reductase (SDR family) member 9
involved_in
ISO
RGD MGI
PMID:15950969 PMID:21138835
GO_REF:0000096 MGI:4417868 RGD:6771322 RGD:6771354
NCBI chr 2:69,210,806...69,233,430
Ensembl chr 2:69,210,789...69,234,877
G
Rbp1
retinol binding protein 1, cellular
involved_in
IEA ISO
UniProt RGD
PMID:15950969
GO_REF:0000002 MGI:2152098 RGD:6771322
NCBI chr 9:98,305,014...98,328,604
Ensembl chr 9:98,305,014...98,328,628
G
Rdh10
retinol dehydrogenase 10 (all-trans)
acts_upstream_of_or_within
IMP
(MGI:3709664|PMID:17473173)
MGI
PMID:17473173
MGI:3709664
NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958
G
Crabp1
cellular retinoic acid binding protein I
involved_in
IEA
UniProt
GO_REF:0000002 MGI:2152098
NCBI chr 9:54,672,032...54,680,394
Ensembl chr 9:54,672,032...54,680,394
G
Cyp26a1
cytochrome P450, family 26, subfamily a, polypeptide 1
acts_upstream_of_or_within involved_in
ISO IDA
(MGI:1350515|PMID:10588879) (MGI:894533|PMID:9250660)
MGI
PMID:9250660 PMID:10588879
GO_REF:0000096 MGI:1350515 MGI:4834177 MGI:894533
NCBI chr19:37,686,186...37,689,984
Ensembl chr19:37,686,246...37,689,984
G
Cyp26b1
cytochrome P450, family 26, subfamily b, polypeptide 1
acts_upstream_of_or_within involved_in
IC ISO
(MGI:5466369|PMID:22366455)
MGI RGD
PMID:21138835 PMID:22366455
GO_REF:0000096 MGI:4417868 MGI:4834177 MGI:5466369 RGD:6771354
NCBI chr 6:84,548,396...84,570,890
Ensembl chr 6:84,548,396...84,570,890
G
Cyp26c1
cytochrome P450, family 26, subfamily c, polypeptide 1
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr19:37,673,560...37,681,774
Ensembl chr19:37,674,029...37,681,846
G
Cyp2w1
cytochrome P450, family 2, subfamily w, polypeptide 1
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 5:139,338,371...139,345,362
Ensembl chr 5:139,338,372...139,342,788
G
Adh1
alcohol dehydrogenase 1 (class I)
acts_upstream_of_or_within involved_in
IMP IGI IBA
(MGI:3510590|PMID:15193143) (MGI:1338643|PMID:10358022), (MGI:2675573|PMID:12851412) (MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:10358022 PMID:12851412 PMID:15193143 PMID:21873635
MGI:1338643 MGI:2675573 MGI:3510590 MGI:6201960
NCBI chr 3:137,983,346...137,996,459
Ensembl chr 3:137,966,752...137,996,459
G
Adh6a
alcohol dehydrogenase 6A (class V)
involved_in
IBA
(MGI:6201960|PMID:21873635)
GO_Central
PMID:21873635
MGI:6201960
NCBI chr 3:138,019,047...138,036,895
Ensembl chr 3:138,019,047...138,036,895
G
Adh6b
alcohol dehydrogenase 6B (class V)
involved_in
IBA
(MGI:6201960|PMID:21873635)
GO_Central
PMID:21873635
MGI:6201960
NCBI chr 3:138,047,176...138,064,620
Ensembl chr 3:138,047,536...138,064,622
G
Adh7
alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
acts_upstream_of_or_within involved_in
IMP IBA
(MGI:1338643|PMID:10358022), (MGI:1340177|PMID:10402668) (MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:10358022 PMID:10402668 PMID:21873635
MGI:1338643 MGI:1340177 MGI:6201960
NCBI chr 3:137,903,828...137,937,803
Ensembl chr 3:137,923,521...137,939,143
G
Aldh1a1
aldehyde dehydrogenase family 1, subfamily A1
acts_upstream_of_or_within
IDA IMP IGI
(MGI:1336449|PMID:10191271) (MGI:3608158|PMID:16207763) (MGI:2664447|PMID:12808103), (MGI:2675573|PMID:12851412)
MGI
PMID:10191271 PMID:12808103 PMID:12851412 PMID:16207763
MGI:1336449 MGI:2664447 MGI:2675573 MGI:3608158
NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829
G
Aldh1a2
aldehyde dehydrogenase family 1, subfamily A2
acts_upstream_of_or_within involved_in
IDA ISO IMP
(MGI:83148|PMID:8797830) (MGI:3612223|PMID:16368932) (MGI:2681052|PMID:14623241)
MGI RGD
PMID:8797830 PMID:12547725 PMID:14623241 PMID:16368932
GO_REF:0000096 MGI:2681052 MGI:3612223 MGI:4417868 MGI:83148 RGD:1576367
NCBI chr 9:71,123,071...71,203,525
Ensembl chr 9:71,123,071...71,203,525
G
Aldh1a3
aldehyde dehydrogenase family 1, subfamily A3
involved_in acts_upstream_of_or_within
ISO IMP IGI
(MGI:3608158|PMID:16207763) (MGI:3701419|PMID:17207476)
MGI
PMID:16207763 PMID:17207476
GO_REF:0000096 MGI:3608158 MGI:3701419 MGI:4834177
NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265
G
Aldh1a7
aldehyde dehydrogenase family 1, subfamily A7
NOT|acts_upstream_of_or_within
IDA
(MGI:1336449|PMID:10191271)
MGI
PMID:10191271
MGI:1336449
NCBI chr19:20,670,317...20,704,920
Ensembl chr19:20,670,317...20,704,926
G
Aldh8a1
aldehyde dehydrogenase 8 family, member A1
involved_in
ISO IBA
(MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:21873635
GO_REF:0000096 MGI:4834177 MGI:6201960
NCBI chr10:21,253,199...21,272,477
Ensembl chr10:21,253,190...21,272,484
G
Bco2
beta-carotene oxygenase 2
involved_in
NAS
(MGI:2159483|PMID:11278918)
UniProt
PMID:11278918
MGI:2159483
NCBI chr 9:50,444,387...50,466,513
Ensembl chr 9:50,444,387...50,466,481
G
Crabp2
cellular retinoic acid binding protein II
acts_upstream_of_or_within
IDA
(MGI:1313226|PMID:9826179)
MGI
PMID:9826179
MGI:1313226
NCBI chr 3:87,856,000...87,860,679
Ensembl chr 3:87,855,973...87,860,683
G
Cyp26a1
cytochrome P450, family 26, subfamily a, polypeptide 1
involved_in acts_upstream_of_or_within
ISO IDA IMP
(MGI:1195386|PMID:9442090), (MGI:894533|PMID:9250660) (MGI:3522528|PMID:15531370)
MGI UniProt
PMID:9250660 PMID:9442090 PMID:15531370
GO_REF:0000096 MGI:1195386 MGI:3522528 MGI:4834177 MGI:894533
NCBI chr19:37,686,186...37,689,984
Ensembl chr19:37,686,246...37,689,984
G
Cyp26b1
cytochrome P450, family 26, subfamily b, polypeptide 1
acts_upstream_of_or_within involved_in
IC ISO
(MGI:3037623|PMID:15030763)
MGI
PMID:15030763
GO_REF:0000096 MGI:3037623 MGI:4834177
NCBI chr 6:84,548,396...84,570,890
Ensembl chr 6:84,548,396...84,570,890
G
Cyp2c29
cytochrome P450, family 2, subfamily c, polypeptide 29
involved_in
ISO
(PMID:11093772)
UniProt
PMID:11093772
NCBI chr19:39,275,488...39,319,157
Ensembl chr19:39,257,849...39,319,157
G
Cyp2c55
cytochrome P450, family 2, subfamily c, polypeptide 55
involved_in
ISO
(PMID:11093772)
UniProt
PMID:11093772
NCBI chr19:38,995,384...39,031,134
Ensembl chr19:38,995,463...39,031,137
G
Cyp2s1
cytochrome P450, family 2, subfamily s, polypeptide 1
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 7:25,501,894...25,515,950
Ensembl chr 7:25,501,900...25,516,338
G
Cyp3a11
cytochrome P450, family 3, subfamily a, polypeptide 11
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 5:145,791,417...145,816,664
Ensembl chr 5:145,791,236...145,816,774
G
Cyp3a13
cytochrome P450, family 3, subfamily a, polypeptide 13
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 5:137,891,195...137,923,872
Ensembl chr 5:137,891,194...137,919,881
G
Cyp3a16
cytochrome P450, family 3, subfamily a, polypeptide 16
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 5:145,373,119...145,406,550
Ensembl chr 5:145,373,119...145,406,533
G
Cyp3a41a
cytochrome P450, family 3, subfamily a, polypeptide 41A
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 5:145,630,859...145,656,946
Ensembl chr 5:145,630,859...145,656,946
G
Cyp3a41b
cytochrome P450, family 3, subfamily a, polypeptide 41B
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 5:145,495,474...145,521,542
Ensembl chr 5:145,495,474...145,521,540
G
Cyp3a44
cytochrome P450, family 3, subfamily a, polypeptide 44
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 5:145,710,793...145,742,701
Ensembl chr 5:145,710,793...145,742,684
G
Lcn5
lipocalin 5
acts_upstream_of_or_within
TAS
(MGI:1861869|PMID:10936050)
MGI
PMID:10936050
MGI:1861869
NCBI chr 2:25,547,944...25,552,242
Ensembl chr 2:25,547,964...25,551,989
G
Rbp1
retinol binding protein 1, cellular
acts_upstream_of_or_within
IGI IMP
(MGI:3510590|PMID:15193143)
MGI
PMID:15193143
MGI:3510590
NCBI chr 9:98,305,014...98,328,604
Ensembl chr 9:98,305,014...98,328,628
G
Rdh1
retinol dehydrogenase 1 (all trans)
involved_in
ISO
MGI
GO_REF:0000096 MGI:4417868
NCBI chr10:127,595,595...127,604,168
Ensembl chr10:127,595,590...127,604,166
G
Rdh16
retinol dehydrogenase 16
involved_in
ISO
RGD MGI
PMID:7499345
GO_REF:0000096 MGI:4417868 RGD:1299624
NCBI chr10:127,636,959...127,651,715
Ensembl chr10:127,637,021...127,682,434
G
Rdh16f2
RDH16 family member 2
involved_in
ISO
MGI
GO_REF:0000096 MGI:4417868
NCBI chr10:127,702,345...127,713,188
Ensembl chr10:127,702,343...127,713,186
G
Rdh19
retinol dehydrogenase 19
involved_in
ISO
MGI
GO_REF:0000096 MGI:4417868
NCBI chr10:127,685,797...127,697,045
Ensembl chr10:127,685,797...127,697,045
G
Rdh9
retinol dehydrogenase 9
involved_in
ISO
MGI
GO_REF:0000096 MGI:4417868
NCBI chr10:127,612,274...127,628,566
Ensembl chr10:127,612,255...127,628,566
G
Scpep1
serine carboxypeptidase 1
ISO
RGD
PMID:11447226
RGD:70518
NCBI chr11:88,814,846...88,846,268
Ensembl chr11:88,814,846...88,846,291
G
Adh1
alcohol dehydrogenase 1 (class I)
acts_upstream_of_or_within involved_in
IGI IMP IBA
(MGI:3510590|PMID:15193143) (MGI:1338643|PMID:10358022), (MGI:2675573|PMID:12851412) (MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:10358022 PMID:12851412 PMID:15193143 PMID:21873635
MGI:1338643 MGI:2675573 MGI:3510590 MGI:6201960
NCBI chr 3:137,983,346...137,996,459
Ensembl chr 3:137,966,752...137,996,459
G
Adh4
alcohol dehydrogenase 4 (class II), pi polypeptide
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 3:138,121,217...138,138,444
Ensembl chr 3:138,121,227...138,136,653
G
Adh6a
alcohol dehydrogenase 6A (class V)
involved_in
IBA
(MGI:6201960|PMID:21873635)
GO_Central
PMID:21873635
MGI:6201960
NCBI chr 3:138,019,047...138,036,895
Ensembl chr 3:138,019,047...138,036,895
G
Adh6b
alcohol dehydrogenase 6B (class V)
involved_in
IBA
(MGI:6201960|PMID:21873635)
GO_Central
PMID:21873635
MGI:6201960
NCBI chr 3:138,047,176...138,064,620
Ensembl chr 3:138,047,536...138,064,622
G
Adh7
alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
involved_in acts_upstream_of_or_within
IBA ISO IMP
(MGI:6201960|PMID:21873635) (MGI:1338643|PMID:10358022), (MGI:1340177|PMID:10402668)
GO_Central MGI RGD
PMID:10358022 PMID:10402668 PMID:10829036 PMID:21873635
GO_REF:0000096 MGI:1338643 MGI:1340177 MGI:4417868 MGI:6201960 RGD:631904
NCBI chr 3:137,903,828...137,937,803
Ensembl chr 3:137,923,521...137,939,143
G
Akr1b10
aldo-keto reductase family 1, member B10 (aldose reductase)
ISO
RGD
PMID:20709016
RGD:6903952
NCBI chr 6:34,361,182...34,373,884
Ensembl chr 6:34,361,153...34,373,885
G
Aldh1a1
aldehyde dehydrogenase family 1, subfamily A1
acts_upstream_of_or_within
IMP
(MGI:2675573|PMID:12851412)
MGI
PMID:12851412
MGI:2675573
NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829
G
Cyp1a1
cytochrome P450, family 1, subfamily a, polypeptide 1
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 9:57,595,211...57,611,107
Ensembl chr 9:57,595,211...57,611,107
G
Cyp1a2
cytochrome P450, family 1, subfamily a, polypeptide 2
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 9:57,584,220...57,590,938
Ensembl chr 9:57,584,220...57,590,986
G
Cyp1b1
cytochrome P450, family 1, subfamily b, polypeptide 1
involved_in
IDA ISO
(MGI:5572883|PMID:15258110)
UniProt MGI
PMID:15258110
GO_REF:0000096 MGI:4834177 MGI:5572883
NCBI chr17:80,014,369...80,022,490
Ensembl chr17:80,008,966...80,022,490
G
Cyp2d22
cytochrome P450, family 2, subfamily d, polypeptide 22
involved_in
ISO
(PMID:10681376)
UniProt
PMID:10681376
NCBI chr15:82,254,728...82,264,461
Ensembl chr15:82,254,728...82,264,461
G
Dhrs3
dehydrogenase/reductase (SDR family) member 3
involved_in
IEA
UniProt
GO_REF:0000002 MGI:2152098
NCBI chr 4:144,618,712...144,654,779
Ensembl chr 4:144,619,397...144,654,779
G
Dhrs7
dehydrogenase/reductase (SDR family) member 7
acts_upstream_of_or_within
ISO
GOC
GO_REF:0000096 MGI:4834177
NCBI chr12:72,697,127...72,711,678
Ensembl chr12:72,697,127...72,711,683
G
Dhrs9
dehydrogenase/reductase (SDR family) member 9
involved_in
IBA
(MGI:6201960|PMID:21873635)
GO_Central
PMID:21873635
MGI:6201960
NCBI chr 2:69,210,806...69,233,430
Ensembl chr 2:69,210,789...69,234,877
G
Hsd17b6
hydroxysteroid (17-beta) dehydrogenase 6
involved_in
IBA
(MGI:6201960|PMID:21873635)
GO_Central
PMID:21873635
MGI:6201960
NCBI chr10:127,826,800...127,843,517
Ensembl chr10:127,826,805...127,843,480
G
Lrat
lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
involved_in acts_upstream_of_or_within
IMP IBA ISO IGI
(MGI:6414681|PMID:28758396) (MGI:6201960|PMID:21873635) (MGI:3775853|PMID:18093970)
UniProt GO_Central MGI RGD
PMID:2253789 PMID:8460936 PMID:9244401 PMID:14642897 PMID:18093970 PMID:21873635 PMID:28758396 More...
GO_REF:0000096 MGI:3775853 MGI:4417868 MGI:4834177 MGI:6201960 MGI:6414681 RGD:1599829 RGD:1599831 RGD:1599832 RGD:6484737
NCBI chr 3:82,799,889...82,811,281
Ensembl chr 3:82,799,886...82,811,280
G
Plb1
phospholipase B1
involved_in
ISO
RGD MGI
PMID:8117729
GO_REF:0000096 MGI:4417868 RGD:6903951
NCBI chr 5:32,390,035...32,521,700
Ensembl chr 5:32,390,052...32,523,864
G
Rbp1
retinol binding protein 1, cellular
acts_upstream_of_or_within involved_in
IGI ISO IMP
(MGI:3510590|PMID:15193143) (MGI:3510590|PMID:15193143), (MGI:3575475|PMID:15765518)
MGI RGD
PMID:14642897 PMID:15193143 PMID:15765518
GO_REF:0000096 MGI:3510590 MGI:3575475 MGI:4417868 RGD:6484737
NCBI chr 9:98,305,014...98,328,604
Ensembl chr 9:98,305,014...98,328,628
G
Rbp4
retinol binding protein 4, plasma
involved_in acts_upstream_of_or_within
ISO IGI
(MGI:3775853|PMID:18093970)
MGI
PMID:18093970
GO_REF:0000096 MGI:3775853 MGI:4834177
NCBI chr19:38,105,068...38,113,769
Ensembl chr19:38,105,077...38,113,729
G
Rdh1
retinol dehydrogenase 1 (all trans)
involved_in
ISO IBA
(MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:21873635
GO_REF:0000096 MGI:4417868 MGI:6201960
NCBI chr10:127,595,595...127,604,168
Ensembl chr10:127,595,590...127,604,166
G
Rdh10
retinol dehydrogenase 10 (all-trans)
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 1:16,176,106...16,202,774
Ensembl chr 1:16,175,998...16,203,958
G
Rdh11
retinol dehydrogenase 11
involved_in acts_upstream_of_or_within
IMP ISO
(MGI:6189614|PMID:29567832) (MGI:2673050|PMID:12807874)
UniProt GOC
PMID:12807874 PMID:29567832
MGI:2673050 MGI:6189614
NCBI chr12:79,221,007...79,238,629
Ensembl chr12:79,221,111...79,239,067
G
Rdh12
retinol dehydrogenase 12
involved_in
ISO IDA
(MGI:5442470|PMID:22621924)
MGI UniProt
PMID:22621924
GO_REF:0000096 MGI:4834177 MGI:5442470
NCBI chr12:79,255,687...79,269,438
Ensembl chr12:79,255,688...79,269,439
G
Rdh14
retinol dehydrogenase 14 (all-trans and 9-cis)
involved_in acts_upstream_of_or_within
IDA
(MGI:6271140|PMID:12226107) (MGI:5618338|PMID:25533474)
UniProt MGI
PMID:12226107 PMID:25533474
MGI:5618338 MGI:6271140
NCBI chr12:10,440,752...10,445,562
Ensembl chr12:10,440,772...10,445,562
G
Rdh16
retinol dehydrogenase 16
involved_in
ISO IBA
(MGI:6201960|PMID:21873635)
RGD GO_Central MGI
PMID:7499345 PMID:21873635
GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:1299624
NCBI chr10:127,636,959...127,651,715
Ensembl chr10:127,637,021...127,682,434
G
Rdh16f2
RDH16 family member 2
involved_in
ISO IBA
(MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:21873635
GO_REF:0000096 MGI:4417868 MGI:6201960
NCBI chr10:127,702,345...127,713,188
Ensembl chr10:127,702,343...127,713,186
G
Rdh19
retinol dehydrogenase 19
involved_in
ISO IBA
(MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:21873635
GO_REF:0000096 MGI:4417868 MGI:6201960
NCBI chr10:127,685,797...127,697,045
Ensembl chr10:127,685,797...127,697,045
G
Rdh7
retinol dehydrogenase 7
involved_in
IBA
(MGI:6201960|PMID:21873635)
GO_Central
PMID:21873635
MGI:6201960
NCBI chr10:127,719,896...127,725,116
Ensembl chr10:127,719,897...127,724,686
G
Rdh8
retinol dehydrogenase 8
acts_upstream_of_or_within involved_in
IDA IBA
(MGI:3584232|PMID:15755727) (MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:15755727 PMID:21873635
MGI:3584232 MGI:6201960
NCBI chr 9:20,729,790...20,739,354
Ensembl chr 9:20,729,799...20,737,413
G
Rdh9
retinol dehydrogenase 9
involved_in
ISO IBA
(MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:21873635
GO_REF:0000096 MGI:4417868 MGI:6201960
NCBI chr10:127,612,274...127,628,566
Ensembl chr10:127,612,255...127,628,566
G
Retsat
retinol saturase (all trans retinol 13,14 reductase)
involved_in
IDA IBA
(MGI:3522397|PMID:15358783) (MGI:6201960|PMID:21873635)
HGNC-UCL GO_Central
PMID:15358783 PMID:21873635
MGI:3522397 MGI:6201960
NCBI chr 6:72,575,585...72,584,471
Ensembl chr 6:72,575,458...72,585,408
G
Rpe65
retinal pigment epithelium 65
involved_in
ISO
RGD MGI
PMID:3603006
GO_REF:0000096 MGI:4417868 RGD:9585656
NCBI chr 3:159,304,712...159,330,944
Ensembl chr 3:159,304,812...159,330,958
G
Sdr16c5
short chain dehydrogenase/reductase family 16C, member 5
involved_in
ISO IBA
(MGI:6201960|PMID:21873635)
MGI GO_Central
PMID:21873635
GO_REF:0000096 MGI:4834177 MGI:6201960
NCBI chr 4:3,995,942...4,019,663
Ensembl chr 4:3,995,936...4,019,663
G
Sdr9c7
4short chain dehydrogenase/reductase family 9C, member 7
involved_in
IBA
(MGI:6201960|PMID:21873635)
GO_Central
PMID:21873635
MGI:6201960
NCBI chr10:127,734,404...127,747,630
Ensembl chr10:127,734,387...127,747,630
G
Ttr
transthyretin
involved_in
IEA
UniProt
GO_REF:0000002 MGI:2152098
NCBI chr18:20,797,266...20,807,383
Ensembl chr18:20,798,337...20,807,378
G
1810013A23Rik
RIKEN cDNA 1810013A23 gene
ISO
RGD
PMID:12576510
RGD:1625187
NCBI chr17:28,490,682...28,492,137
Ensembl chr17:28,451,674...28,520,448
G
Lrat
lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)
involved_in acts_upstream_of_or_within
IMP IBA ISO IDA
(MGI:6414681|PMID:28758396) (MGI:6201960|PMID:21873635) (MGI:1928450|PMID:11108736)
UniProt GO_Central MGI RGD
PMID:2253789 PMID:8460936 PMID:9244401 PMID:11108736 PMID:21873635 PMID:28758396 More...
GO_REF:0000096 MGI:1928450 MGI:4417868 MGI:6201960 MGI:6414681 RGD:1599829 RGD:1599831 RGD:1599832
NCBI chr 3:82,799,889...82,811,281
Ensembl chr 3:82,799,886...82,811,280
G
Ppard
peroxisome proliferator activator receptor delta
involved_in
ISO
RGD MGI
PMID:12576510
GO_REF:0000096 MGI:4417868 RGD:1625187
NCBI chr17:28,451,657...28,520,446
Ensembl chr17:28,451,674...28,520,448
G
Rbp1
retinol binding protein 1, cellular
involved_in
ISO
MGI
GO_REF:0000096 MGI:4834177
NCBI chr 9:98,305,014...98,328,604
Ensembl chr 9:98,305,014...98,328,628
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all