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ONTOLOGY REPORT - ANNOTATIONS


Term:ossification
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Accession:GO:0001503 term browser browse the term
Definition:The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance.
Comment:Note that this term does not have a 'developmental process' parent because ossification isn't necessarily developmental, can also occur as part of bone remodeling. Instead use 'ossification involved in bone maturation ; GO:0043931'.
Synonyms:exact_synonym: bone biosynthesis;   bone formation;   osteogenesis
 xref: Wikipedia:Ossification


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ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan IEP RGD PMID:20047194 RGD:2315746 NCBI chr 1:140,762,758...140,824,441
Ensembl chr 1:140,762,758...140,824,441
JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:19403161, PMID:21873635 RGD:2315903, RGD:13792537 NCBI chr 8:23,142,733...23,149,067
Ensembl chr 8:23,142,734...23,148,396
JBrowse link
G Ahsg alpha-2-HS-glycoprotein ISO (MGI:82299|PMID:8695840) RGD PMID:8695840 MGI:82299 NCBI chr11:81,711,269...81,717,594 JBrowse link
G Alox15 arachidonate 15-lipoxygenase ISS
ISO
GO_REF:0000024
MGI:1857428 (MGI:2686849|PMID:14716014)
UniProt
RGD
PMID:14716014 GO_REF:0000024, MGI:2686849 NCBI chr10:56,953,692...56,962,145
Ensembl chr10:56,953,691...56,962,161
JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 ISO (PMID:10973252) RGD PMID:10973252 NCBI chr 4:65,736,585...65,821,916
Ensembl chr 4:65,736,585...65,818,521
JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 ISO
ISS
(PMID:16433694)
GO_REF:0000024
RGD
UniProt
PMID:16433694 GO_REF:0000024 NCBI chr 4:115,417,100...115,435,754
Ensembl chr 4:115,416,580...115,437,206
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1857430 (MGI:1307011|PMID:10193316)
Ensembl
RGD
PMID:10193316 GO_REF:0000107, MGI:1307011 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bglap bone gamma-carboxyglutamate protein IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:3265336, PMID:21873635 RGD:1298707, RGD:13792537 NCBI chr 2:187,741,770...187,748,445
Ensembl chr 2:187,741,770...187,742,747
JBrowse link
G Bmp6 bone morphogenetic protein 6 IDA RGD PMID:16761078 RGD:7242406 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S NAS RGD PMID:7479909 RGD:634679 NCBI chr13:52,889,570...52,964,558
Ensembl chr13:52,889,737...52,964,155
JBrowse link
G Casr calcium-sensing receptor IMP RGD PMID:15084499 RGD:1358486 NCBI chr11:67,188,204...67,262,261
Ensembl chr11:67,188,630...67,258,771
JBrowse link
G Cbfb core-binding factor subunit beta ISO MGI:1934195|MGI:2447293 (MGI:2446761|PMID:12434156), (MGI:2446762|PMID:12434155) RGD PMID:12434155, PMID:12434156 MGI:2446761, MGI:2446762 NCBI chr19:37,127,508...37,171,075
Ensembl chr19:37,127,508...37,171,069
JBrowse link
G Ccn2 cellular communication network factor 2 ISO MGI:2663631 (MGI:1931624|PMID:11237711), (MGI:2660724|PMID:12736220) RGD PMID:11237711, PMID:12736220 MGI:1931624, MGI:2660724 NCBI chr 1:21,851,657...21,854,773
Ensembl chr 1:21,851,660...21,854,773
JBrowse link
G Chrdl1 chordin-like 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:114,554,359...114,658,975
Ensembl chr  X:114,554,359...114,658,931
JBrowse link
G Clec11a C-type lectin domain containing 11A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:100,290,374...100,293,515
Ensembl chr 1:100,289,295...100,293,558
JBrowse link
G Clec3a C-type lectin domain family 3, member A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:46,733,668...46,741,245
Ensembl chr19:46,733,633...46,743,013
JBrowse link
G Clec3b C-type lectin domain family 3, member B IEP
IBA
ISO
PMID:7798325
PMID:21873635
(PMID:7798325)
RGD PMID:7798325, PMID:7798325, PMID:21873635 RGD:8554609, RGD:13792537 NCBI chr 8:132,241,016...132,248,066
Ensembl chr 8:132,241,134...132,246,694
JBrowse link
G Col11a1 collagen type XI alpha 1 chain IEP RGD PMID:9822201 RGD:70694 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Col1a1 collagen type I alpha 1 chain IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:14595530, PMID:21873635 RGD:1600917, RGD:13792537 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO (PMID:9119111) RGD PMID:9119111 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Col5a2 collagen type V alpha 2 chain IEP RGD PMID:9822201 RGD:70694 NCBI chr 9:52,091,088...52,238,735
Ensembl chr 9:52,092,511...52,238,564
JBrowse link
G Comp cartilage oligomeric matrix protein ISO (MGI:5318950|PMID:21350216), (MGI:6100855|PMID:27151399) RGD PMID:21350216, PMID:27151399 MGI:5318950, MGI:6100855 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Csf1 colony stimulating factor 1 IMP RGD PMID:12379742 RGD:628338 NCBI chr 2:210,522,370...210,550,546
Ensembl chr 2:210,522,375...210,550,560
JBrowse link
G Dhx36 DEAH-box helicase 36 ISO (MGI:5559667|PMID:21590736) RGD PMID:21590736 MGI:5559667 NCBI chr 2:152,785,844...152,824,549
Ensembl chr 2:152,785,844...152,824,547
JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 ISO MGI:3526402 (MGI:5780798|PMID:21308776) RGD PMID:21308776 MGI:5780798 NCBI chr 6:133,576,513...133,583,751
Ensembl chr 6:133,552,821...133,583,751
JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:6,889,851...6,923,961
Ensembl chr14:6,889,856...6,900,733
JBrowse link
G Ecm1 extracellular matrix protein 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:197,855,468...197,860,973
Ensembl chr 2:197,855,460...197,860,699
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO
ISS
(PMID:12086964)
GO_REF:0000024
RGD
UniProt
PMID:12086964 GO_REF:0000024 NCBI chr 4:98,648,513...98,709,695
Ensembl chr 4:98,648,545...98,709,694
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (PMID:7550340) RGD PMID:7550340 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Ext2 exostosin glycosyltransferase 2 ISO (PMID:9326317) RGD PMID:9326317 NCBI chr 3:82,602,784...82,734,557
Ensembl chr 3:82,602,785...82,734,533
JBrowse link
G Fgf18 fibroblast growth factor 18 ISO MGI:2178751|MGI:2179607 (MGI:2177990|PMID:11937493), (MGI:2177991|PMID:11937494) RGD PMID:11937493, PMID:11937494 MGI:2177990, MGI:2177991 NCBI chr10:18,047,109...18,082,290
Ensembl chr10:18,047,109...18,063,391
JBrowse link
G Fn1 fibronectin 1 TAS RGD PMID:15833739 RGD:1601193 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Foxc1 forkhead box C1 ISO MGI:1856705 (MGI:2676506|PMID:14512019) RGD PMID:14512019 MGI:2676506 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Foxc2 forkhead box C2 ISO MGI:1857865 (MGI:86990|PMID:9106663) RGD PMID:9106663 MGI:86990 NCBI chr19:53,044,379...53,047,081
Ensembl chr19:53,044,379...53,047,081
JBrowse link
G Fstl3 follistatin like 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:12,806,031...12,810,556
Ensembl chr 7:12,804,919...12,810,570
JBrowse link
G Fzd9 frizzled class receptor 9 ISS
ISO
GO_REF:0000024
(MGI:4943600|PMID:21402791)
UniProt
RGD
PMID:21402791 GO_REF:0000024, MGI:4943600 NCBI chr12:24,473,981...24,476,295
Ensembl chr12:24,473,981...24,476,295
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ISO
ISS
(PMID:15946906)
GO_REF:0000024
RGD
UniProt
PMID:15946906 GO_REF:0000024 NCBI chr17:42,085,027...42,131,344
Ensembl chr17:42,085,028...42,127,678
JBrowse link
G Gpm6b glycoprotein m6b IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:29,604,607...29,751,174
Ensembl chr  X:29,607,075...29,648,403
JBrowse link
G Hist1h2ao histone cluster 1, H2ao IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:44,744,534...44,744,931
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 2:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
JBrowse link
G Hist1h4b histone cluster 1 H4 family member B IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:44,522,144...44,526,587
Ensembl chr17:44,522,140...44,526,583
JBrowse link
G Hist1h4m histone cluster 1, H4m IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr17:44,815,684...44,815,995 JBrowse link
G Hist2h4 histone cluster 2, H4 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:198,411,955...198,412,350
Ensembl chr 2:198,411,955...198,412,350
JBrowse link
G Hist2h4a histone cluster 2 H4 family member A IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:170,800,539...170,800,979
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 2:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
JBrowse link
G Ibsp integrin-binding sialoprotein TAS RGD PMID:11087753 RGD:62418 NCBI chr14:6,801,200...6,813,987
Ensembl chr14:6,801,204...6,813,945
JBrowse link
G Igsf10 immunoglobulin superfamily, member 10 IDA PMID:14962803 MGI PMID:14962803 RGD:1302504 NCBI chr 2:149,535,199...149,564,180
Ensembl chr 2:149,533,151...149,564,113
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:1934258 (MGI:2154465|PMID:11748145) RGD PMID:11748145 MGI:2154465 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G LOC100912489 histone H4-like IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:170,144,871...170,145,311
Ensembl chr 4:170,144,951...170,145,262
JBrowse link
G LOC100912564 histone H4-like IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:170,182,634...170,183,074
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 2:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr17:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
Ensembl chr 4:43,770,250...43,770,561
JBrowse link
G Magmas-ps1 mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction, pseudogene 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:91,752,860...91,753,380 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO (MGI:3575204|PMID:15820682) RGD PMID:15820682 MGI:3575204 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Men1 menin 1 ISO MGI:2683274|MGI:3573783 (MGI:3763871|PMID:17927973) RGD PMID:17927973 MGI:3763871 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Mesd mesoderm development LRP chaperone ISO (PMID:31564437) RGD PMID:31564437 NCBI chr 1:146,030,211...146,043,097
Ensembl chr 1:146,037,426...146,043,097
JBrowse link
G Mgp matrix Gla protein IEP
IEA
GO_REF:0000043 UniProt PMID:9718189 GO_REF:0000043, RGD:1582512 NCBI chr 4:170,856,783...170,860,105
Ensembl chr 4:170,856,751...170,860,225
JBrowse link
G Mmp13 matrix metallopeptidase 13 IEP RGD PMID:15883642 RGD:1582555 NCBI chr 8:5,522,739...5,533,018
Ensembl chr 8:5,522,739...5,533,018
JBrowse link
G Mmp14 matrix metallopeptidase 14 IEP
ISO
MGI:1276107 (MGI:3771253|PMID:18022611) RGD PMID:18022611, PMID:15883642 MGI:3771253, RGD:1582555 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mmp16 matrix metallopeptidase 16 ISO MGI:2445723 (MGI:3771253|PMID:18022611) RGD PMID:18022611 MGI:3771253 NCBI chr 5:31,568,344...31,818,368
Ensembl chr 5:31,568,419...31,810,484
JBrowse link
G Mmp8 matrix metallopeptidase 8 IEP RGD PMID:15052653 RGD:1540385 NCBI chr 8:5,768,808...5,777,741
Ensembl chr 8:5,768,811...5,778,702
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:15883642 RGD:1582555 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Msx2 msh homeobox 2 ISO MGI:1926381 (MGI:1355063|PMID:10742104) RGD PMID:10742104 MGI:1355063 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Myf5 myogenic factor 5 ISO MGI:1857219 (MGI:79097|PMID:8587605) RGD PMID:8587605 MGI:79097 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Myog myogenin ISO MGI:97252 (MGI:79097|PMID:8587605) RGD PMID:8587605 MGI:79097 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Nog noggin IEP RGD PMID:24611347 RGD:10429074 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Nppc natriuretic peptide C IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:93,731,436...93,735,636
Ensembl chr 9:93,731,436...93,735,636
JBrowse link
G Npr2 natriuretic peptide receptor 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:59,128,186...59,147,321
Ensembl chr 5:59,128,315...59,147,255
JBrowse link
G Ostn osteocrin IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:76,851,923...76,888,140
Ensembl chr11:76,851,322...76,888,178
JBrowse link
G Pam16 presequence translocase associated motor 16 ISO (PMID:24786642) RGD PMID:24786642 NCBI chr10:11,146,359...11,153,936
Ensembl chr10:11,146,359...11,153,936
JBrowse link
G Pdlim7 PDZ and LIM domain 7 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:9,653,510...9,668,715
Ensembl chr17:9,653,561...9,668,712
JBrowse link
G Ppargc1b PPARG coactivator 1 beta ISO (MGI:3838421|PMID:19252502) RGD PMID:19252502 MGI:3838421 NCBI chr18:56,626,725...56,650,524
Ensembl chr18:56,626,712...56,728,968
JBrowse link
G Pth parathyroid hormone TAS RGD PMID:11145578 RGD:61525 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Pth1r parathyroid hormone 1 receptor ISO MGI:3628795 (MGI:3625556|PMID:12194850) RGD PMID:12194850 MGI:3625556 NCBI chr 8:118,984,531...119,012,803
Ensembl chr 8:118,988,053...119,012,671
JBrowse link
G Ptn pleiotrophin ISO (MGI:2429445|PMID:12413943) RGD PMID:12413943 MGI:2429445 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Rassf2 Ras association domain family member 2 IEA
ISO
GO_REF:0000107
MGI:5314787 (MGI:5314467|PMID:22227519)
Ensembl
RGD
PMID:22227519 GO_REF:0000107, MGI:5314467 NCBI chr 3:124,574,088...124,610,267
Ensembl chr 3:124,575,621...124,610,267
JBrowse link
G RGD1562378 histone H4 variant H4-v.1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:170,762,862...170,763,962
Ensembl chr 4:170,763,605...170,763,916
JBrowse link
G Ripply2 ripply transcriptional repressor 2 ISO MGI:3513254 (MGI:3715395|PMID:17531978) RGD PMID:17531978 MGI:3715395 NCBI chr 8:94,676,579...94,691,125
Ensembl chr 8:94,686,938...94,691,041
JBrowse link
G Rpl38 ribosomal protein L38 ISO MGI:1861228 (MGI:4888466|PMID:21062742) RGD PMID:21062742 MGI:4888466 NCBI chr10:103,198,424...103,202,059
Ensembl chr 2:199,479,007...199,479,309
JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 IDA RGD PMID:10698968 RGD:631877 NCBI chr 6:45,655,947...45,669,083
Ensembl chr 6:45,655,954...45,669,148
JBrowse link
G Runx1 RUNX family transcription factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:32,765,147...33,003,061
Ensembl chr11:32,769,165...33,003,021
JBrowse link
G Runx2 RUNX family transcription factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Runx3 RUNX family transcription factor 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:153,507,093...153,531,137
Ensembl chr 5:153,507,093...153,531,137
JBrowse link
G Slc26a2 solute carrier family 26 member 2 IDA RGD PMID:9575183 RGD:730044 NCBI chr18:56,518,999...56,534,539
Ensembl chr18:56,520,740...56,534,415
JBrowse link
G Slc34a1 solute carrier family 34 member 1 IEP RGD PMID:17310099 RGD:7243138 NCBI chr17:9,747,766...9,762,739
Ensembl chr17:9,747,752...9,762,813
JBrowse link
G Smad5 SMAD family member 5 IEP RGD PMID:11920662 RGD:724455 NCBI chr17:8,307,448...8,336,996
Ensembl chr17:8,311,796...8,331,032
JBrowse link
G Smo smoothened, frizzled class receptor ISO MGI:2176256|MGI:2176264 (MGI:2154465|PMID:11748145) RGD PMID:11748145 MGI:2154465 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 ISO MGI:1856877 (MGI:3587156|PMID:16025116), (MGI:5468210|PMID:22910579) RGD PMID:16025116, PMID:22910579 MGI:3587156, MGI:5468210 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Sort1 sortilin 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:211,078,092...211,156,312
Ensembl chr 2:211,078,334...211,156,312
JBrowse link
G Sost sclerostin IEP
ISO
IBA
(MGI:2682155|PMID:14633986)
PMID:21873635
RGD PMID:14633986, PMID:15199066, PMID:21873635 MGI:2682155, RGD:1599074, RGD:13792537 NCBI chr10:89,897,087...89,900,131
Ensembl chr10:89,897,087...89,900,131
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (PMID:9119111) RGD PMID:9119111 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Sp1 Sp1 transcription factor ISO MGI:1277166 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 7:144,014,173...144,044,635
Ensembl chr 7:144,014,173...144,044,629
JBrowse link
G Sp3 Sp3 transcription factor ISO MGI:98372 (MGI:3717030|PMID:17584888) RGD PMID:17584888 MGI:3717030 NCBI chr 3:59,644,579...59,689,011
Ensembl chr 3:59,646,015...59,688,692
JBrowse link
G Sparc secreted protein acidic and cysteine rich IEP RGD PMID:12365801 RGD:2300057 NCBI chr10:40,742,390...40,764,232
Ensembl chr10:40,742,400...40,764,185
JBrowse link
G Stc1 stanniocalcin 1 IDA RGD PMID:12933688 RGD:737672 NCBI chr15:50,891,137...50,901,791
Ensembl chr15:50,891,127...50,903,162
JBrowse link
G Suco SUN domain containing ossification factor IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:79,736,485...79,801,133
Ensembl chr13:79,736,482...79,801,561
JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 IEP RGD PMID:24036726 RGD:10003162 NCBI chr12:17,488,482...17,533,334
Ensembl chr12:17,488,487...17,522,534
JBrowse link
G Tapt1 transmembrane anterior posterior transformation 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:71,416,153...71,462,646
Ensembl chr14:71,424,083...71,462,618
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 ISO MGI:1856973 (MGI:5308498|PMID:22087326) RGD PMID:22087326 MGI:5308498 NCBI chr 1:219,126,687...219,139,466
Ensembl chr 1:219,127,602...219,139,464
JBrowse link
G Thra thyroid hormone receptor alpha IEA
ISO
GO_REF:0000107
MGI:1860407|MGI:1860442 (MGI:1330488|PMID:9927422), (MGI:894529|PMID:9250685)
Ensembl
RGD
PMID:9250685, PMID:9927422 GO_REF:0000107, MGI:1330488, MGI:894529 NCBI chr10:86,657,285...86,684,935
Ensembl chr10:86,657,285...86,684,933
JBrowse link
G Tmem38b transmembrane protein 38B ISO MGI:1921416 (MGI:6141091|PMID:27188440) RGD PMID:27188440 MGI:6141091 NCBI chr 5:70,639,156...70,675,055
Ensembl chr 5:70,639,156...70,675,054
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11A IBA
ISO
PMID:21873635
MGI:1860238 (MGI:1345929|PMID:10500098)
RGD PMID:10500098, PMID:21873635 MGI:1345929, RGD:13792537 NCBI chr13:25,778,306...25,835,802
Ensembl chr13:25,778,317...25,835,957
JBrowse link
G Tnfsf11 TNF superfamily member 11 ISO MGI:1859962 (MGI:1329208|PMID:9950424) RGD PMID:9950424 MGI:1329208 NCBI chr15:60,482,527...60,512,704
Ensembl chr15:60,482,527...60,512,704
JBrowse link
G Traf6 TNF receptor associated factor 6 ISO MGI:1859953 (MGI:1335941|PMID:10215628) RGD PMID:10215628 MGI:1335941 NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO MGI:3038818 (MGI:3042355|PMID:15030764) RGD PMID:15030764 MGI:3042355 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 ISO MGI:2655736 (MGI:2654977|PMID:12665593) RGD PMID:12665593 MGI:2654977 NCBI chr 9:113,699,151...113,732,601
Ensembl chr 9:113,699,170...113,732,622
JBrowse link
bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase ISS
ISO
GO_REF:0000024
MGI:1857428 (MGI:2686849|PMID:14716014)
UniProt
RGD
PMID:14716014 GO_REF:0000024, MGI:2686849 NCBI chr10:56,953,692...56,962,145
Ensembl chr10:56,953,691...56,962,161
JBrowse link
G Asgr2 asialoglycoprotein receptor 2 IEP RGD PMID:19841953 RGD:2316850 NCBI chr10:56,710,446...56,723,608
Ensembl chr10:56,710,464...56,723,611
JBrowse link
G Aspn asporin ISO (PMID:19589127) RGD PMID:19589127 NCBI chr17:14,655,958...14,681,355
Ensembl chr17:14,656,009...14,679,409
JBrowse link
G Atf4 activating transcription factor 4 ISS
ISO
GO_REF:0000024
(MGI:3040115|PMID:15109498)
UniProt
RGD
PMID:15109498 GO_REF:0000024, MGI:3040115 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Axin2 axin 2 IEA
ISO
GO_REF:0000107
MGI:3579503 (MGI:4818263|PMID:19623616)
Ensembl
RGD
PMID:19623616 GO_REF:0000107, MGI:4818263 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO MGI:101948|MGI:1922667 (MGI:3528531|PMID:15657444), (MGI:3850932|PMID:19213727) RGD PMID:15657444, PMID:19213727 MGI:3528531, MGI:3850932 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist ISO (PMID:19113921) RGD PMID:19113921 NCBI chr 5:101,003,019...101,006,375
Ensembl chr 5:101,003,023...101,006,375
JBrowse link
G Clec3b C-type lectin domain family 3, member B ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:7589422), (PMID:7798325)
UniProt
RGD
PMID:7589422, PMID:7798325, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:132,241,016...132,248,066
Ensembl chr 8:132,241,134...132,246,694
JBrowse link
G Col1a2 collagen type I alpha 2 chain ISO MGI:1856327 (MGI:5468210|PMID:22910579) RGD PMID:22910579 MGI:5468210 NCBI chr 4:31,534,225...31,569,152
Ensembl chr 4:31,534,225...31,569,151
JBrowse link
G Comp cartilage oligomeric matrix protein IEA
ISO
GO_REF:0000107
(MGI:6100855|PMID:27151399)
Ensembl
RGD
PMID:27151399 GO_REF:0000107, MGI:6100855 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 ISO (PMID:17023519) RGD PMID:17023519 NCBI chr 7:70,333,150...70,340,006
Ensembl chr 7:70,335,061...70,340,005
JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 ISO MGI:3526402 (MGI:5780798|PMID:21308776) RGD PMID:21308776 MGI:5780798 NCBI chr 6:133,576,513...133,583,751
Ensembl chr 6:133,552,821...133,583,751
JBrowse link
G Duox2 dual oxidase 2 IEA
ISO
GO_REF:0000107
MGI:3712359 (MGI:3712355|PMID:17440044)
Ensembl
RGD
PMID:17440044 GO_REF:0000107, MGI:3712355 NCBI chr 3:114,218,187...114,237,808
Ensembl chr 3:114,218,193...114,235,933
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO MGI:2183829 (MGI:2179907|PMID:11997520) RGD PMID:11997520 MGI:2179907 NCBI chr 4:98,648,513...98,709,695
Ensembl chr 4:98,648,545...98,709,694
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO MGI:2183949 (MGI:3692802|PMID:17020410) RGD PMID:17020410 MGI:3692802 NCBI chr 1:80,293,574...80,307,334
Ensembl chr 1:80,293,566...80,307,344
JBrowse link
G Fbxl15 F-box and leucine-rich repeat protein 15 IMP PMID:21572392 UniProt PMID:21572392 RGD:8554771 NCBI chr 1:266,075,782...266,078,023
Ensembl chr 1:266,075,782...266,078,023
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO MGI:3044427 (MGI:3043470|PMID:12756187) RGD PMID:12756187 MGI:3043470 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:4457789|PMID:20582225) RGD PMID:20582225 MGI:4457789 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase ISO MGI:3665439 (MGI:3663851|PMID:16964445) RGD PMID:16964445 MGI:3663851 NCBI chr 5:151,172,189...151,199,746
Ensembl chr 5:151,172,206...151,199,745
JBrowse link
G Gla galactosidase, alpha NOT ISO MGI:1861794 (MGI:3692334|PMID:16697974) RGD PMID:16697974 MGI:3692334 NCBI chr  X:105,405,915...105,417,331
Ensembl chr  X:105,406,792...105,417,323
JBrowse link
G Gpc3 glypican 3 IEA
ISO
GO_REF:0000107
MGI:2159355 (MGI:3612305|PMID:15936336)
Ensembl
RGD
PMID:15936336 GO_REF:0000107, MGI:3612305 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883
JBrowse link
G Gpnmb glycoprotein nmb IEP RGD PMID:11746512 RGD:632991 NCBI chr 4:78,694,447...78,715,685
Ensembl chr 4:78,694,447...78,715,683
JBrowse link
G Ibsp integrin-binding sialoprotein IEA
ISO
IBA
GO_REF:0000107
MGI:3796255 (MGI:5614132|PMID:25464126)
PMID:21873635
Ensembl
RGD
PMID:25464126, PMID:21873635 GO_REF:0000107, MGI:5614132, RGD:13792537 NCBI chr14:6,801,200...6,813,987
Ensembl chr14:6,801,204...6,813,945
JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase ISO MGI:1890508 (MGI:5500993|PMID:23686339) RGD PMID:23686339 MGI:5500993 NCBI chr 5:169,475,270...169,482,031
Ensembl chr 5:169,475,270...169,482,030
JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 ISO
IBA
(PMID:24519609)
(MGI:4359156|PMID:18442316), (MGI:5607401|PMID:20838829)
PMID:21873635
RGD PMID:18442316, PMID:20838829, PMID:24519609, PMID:21873635 MGI:4359156, MGI:5607401, RGD:13792537 NCBI chr 1:213,743,331...213,749,879
Ensembl chr 1:213,744,796...213,745,748
JBrowse link
G Klf10 Kruppel-like factor 10 ISO MGI:3530069 (MGI:3528531|PMID:15657444) RGD PMID:15657444 MGI:3528531 NCBI chr 7:77,156,010...77,162,096
Ensembl chr 7:77,156,006...77,162,148
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 ISS
ISO
GO_REF:0000024
(MGI:4360132|PMID:19605502)
UniProt
RGD
PMID:19605502 GO_REF:0000024, MGI:4360132 NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
JBrowse link
G Lox lysyl oxidase ISO MGI:3610732 (MGI:5603515|PMID:19458888) RGD PMID:19458888 MGI:5603515 NCBI chr18:47,500,320...47,577,819
Ensembl chr18:47,500,330...47,577,819
JBrowse link
G Mmp13 matrix metallopeptidase 13 IEA
ISO
GO_REF:0000107
MGI:3521852 (MGI:3513736|PMID:15563592), (MGI:3771509|PMID:17987127)
Ensembl
RGD
PMID:15563592, PMID:17987127 GO_REF:0000107, MGI:3513736, MGI:3771509 NCBI chr 8:5,522,739...5,533,018
Ensembl chr 8:5,522,739...5,533,018
JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 ISO MGI:5319219 (MGI:5317250|PMID:21406566) RGD PMID:21406566 MGI:5317250 NCBI chr 7:98,820,799...98,960,878
Ensembl chr 7:98,820,812...98,960,837
JBrowse link
G Phex phosphate regulating endopeptidase homolog, X-linked ISO MGI:1857312 (MGI:3851320|PMID:15843468) RGD PMID:15843468 MGI:3851320 NCBI chr  X:40,460,047...40,717,982
Ensembl chr  X:40,460,047...40,717,982
JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic ISO MGI:5014347 (MGI:5013998|PMID:21553379) RGD PMID:21553379 MGI:5013998 NCBI chr 6:6,427,657...6,436,974
Ensembl chr 6:6,427,657...6,436,974
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP PMID:18519738 MGI PMID:18519738 RGD:8554572 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Pth1r parathyroid hormone 1 receptor ISO MGI:2154519 (MGI:2153596|PMID:11606467), (MGI:3624906|PMID:9832460) RGD PMID:9832460, PMID:11606467 MGI:2153596, MGI:3624906 NCBI chr 8:118,984,531...119,012,803
Ensembl chr 8:118,988,053...119,012,671
JBrowse link
G Pthlh parathyroid hormone-like hormone NOT ISO MGI:2154515 (MGI:2153596|PMID:11606467) RGD PMID:11606467 MGI:2153596 NCBI chr 4:181,663,425...181,674,181 JBrowse link
G Ptn pleiotrophin ISO (MGI:2429445|PMID:12413943) RGD PMID:12413943 MGI:2429445 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 IEP RGD PMID:23337931 RGD:11537369 NCBI chr17:11,953,552...12,134,386
Ensembl chr17:11,953,552...12,134,386
JBrowse link
G Rspo2 R-spondin 2 ISO MGI:101948|MGI:88177 (MGI:3850932|PMID:19213727) RGD PMID:19213727 MGI:3850932 NCBI chr 7:81,919,911...82,059,659
Ensembl chr 7:81,924,050...82,059,789
JBrowse link
G Sbds SBDS, ribosome maturation factor ISO (PMID:17920346) RGD PMID:17920346 NCBI chr12:29,921,443...29,930,602
Ensembl chr12:29,921,443...29,930,600
JBrowse link
G Sbno2 strawberry notch homolog 2 ISO MGI:5551983 (MGI:5522615|PMID:23980096) RGD PMID:23980096 MGI:5522615 NCBI chr 7:12,471,805...12,515,700
Ensembl chr 7:12,471,824...12,518,654
JBrowse link
G Slc24a3 solute carrier family 24 member 3 ISO (MGI:6104227|PMID:28602864) RGD PMID:28602864 MGI:6104227 NCBI chr 3:139,333,942...139,835,728
Ensembl chr 3:139,695,028...139,833,967
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 IEA
ISO
GO_REF:0000107
MGI:1856877 (MGI:5293259|PMID:21788370), (MGI:5584216|PMID:24585429)
Ensembl
RGD
PMID:21788370, PMID:24585429 GO_REF:0000107, MGI:5293259, MGI:5584216 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO MGI:101948 (MGI:3850932|PMID:19213727) RGD PMID:19213727 MGI:3850932 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
G Tmem38b transmembrane protein 38B ISO MGI:1921416 (MGI:6141091|PMID:27188440) RGD PMID:27188440 MGI:6141091 NCBI chr 5:70,639,156...70,675,055
Ensembl chr 5:70,639,156...70,675,054
JBrowse link
G Wnt11 Wnt family member 11 ISO MGI:88177 (MGI:3850932|PMID:19213727) RGD PMID:19213727 MGI:3850932 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:1888594 (MGI:5500993|PMID:23686339) RGD PMID:23686339 MGI:5500993 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 ISO MGI:4127698 (MGI:5486117|PMID:22936354) RGD PMID:22936354 MGI:5486117 NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO
ISS
(PMID:16433617)
GO_REF:0000024
RGD
UniProt
PMID:16433617 GO_REF:0000024 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Ccdc154 coiled-coil domain containing 154 ISO MGI:5702426 (MGI:5697796|PMID:20121924) RGD PMID:20121924 MGI:5697796 NCBI chr10:14,518,240...14,529,920
Ensembl chr10:14,519,164...14,528,277
JBrowse link
G Ift80 intraflagellar transport 80 ISO MGI:3689350|MGI:5818514 (MGI:5807019|PMID:26996322) RGD PMID:26996322 MGI:5807019 NCBI chr 2:165,506,878...165,600,748
Ensembl chr 2:165,505,810...165,600,748
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
(PMID:16433617)
GO_REF:0000107
RGD
Ensembl
PMID:16433617 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Lep leptin IDA RGD PMID:21353474 RGD:5128507 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 IBA
ISO
PMID:21873635
MGI:5049904 (MGI:5008224|PMID:21272676)
RGD PMID:21272676, PMID:21873635 MGI:5008224, RGD:13792537 NCBI chr10:83,635,557...83,643,862
Ensembl chr10:83,636,518...83,643,859
JBrowse link
G Snx10 sorting nexin 10 ISO MGI:5690193 (MGI:5688814|PMID:25811986) RGD PMID:25811986 MGI:5688814 NCBI chr 4:81,311,490...81,375,248
Ensembl chr 4:81,311,490...81,374,158
JBrowse link
canonical Wnt signaling pathway involved in osteoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd1 frizzled class receptor 1 ISO
IEA
(PMID:20039315)
GO_REF:0000107
RGD
Ensembl
PMID:20039315 GO_REF:0000107 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Wnt3 Wnt family member 3 ISO
IEA
(PMID:20039315)
GO_REF:0000107
RGD
Ensembl
PMID:20039315 GO_REF:0000107 NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793
JBrowse link
endochondral ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, biomineralization associated ISO MGI:2183411 (MGI:5049900|PMID:20684022) RGD PMID:20684022 MGI:5049900 NCBI chr 5:156,086,496...156,141,513
Ensembl chr 5:156,086,497...156,141,537
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEA
ISO
ISS
GO_REF:0000107
(MGI:4418577|PMID:20059955)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20059955 GO_REF:0000024, GO_REF:0000107, MGI:4418577 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO MGI:2136985 (MGI:1270957|PMID:9664685) RGD PMID:9664685 MGI:1270957 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 ISO MGI:3806990 (MGI:3799383|PMID:18539921) RGD PMID:18539921 MGI:3799383 NCBI chr17:90,191,119...90,218,013
Ensembl chr17:90,188,043...90,218,013
Ensembl chr 5:90,188,043...90,218,013
JBrowse link
G Cbs cystathionine beta synthase ISO MGI:1857139 (MGI:3656462|PMID:15622513) RGD PMID:15622513 MGI:3656462 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Col10a1 collagen type X alpha 1 chain IMP RGD PMID:10853827 RGD:704421 NCBI chr20:41,180,295...41,190,664
Ensembl chr20:41,184,287...41,189,633
JBrowse link
G Col13a1 collagen type XIII alpha 1 chain ISO (PMID:11470398) RGD PMID:11470398 NCBI chr20:31,456,502...31,598,360
Ensembl chr20:31,456,852...31,598,118
JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO MGI:1856671 (MGI:64698|PMID:8130375) RGD PMID:8130375 MGI:64698 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEA
ISO
GO_REF:0000107
(MGI:1334159|PMID:10100048)
Ensembl
RGD
PMID:10100048 GO_REF:0000107, MGI:1334159 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ISO MGI:4947395 (MGI:4946456|PMID:21148564) RGD PMID:21148564 MGI:4946456 NCBI chr16:22,704,318...23,075,071
Ensembl chr16:22,979,444...23,074,798
JBrowse link
G Dlx5 distal-less homeobox 5 IEA
ISO
ISS
GO_REF:0000107
(MGI:4413604|PMID:19956613)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19956613 GO_REF:0000024, GO_REF:0000107, MGI:4413604 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
G Ext1 exostosin glycosyltransferase 1 ISO (MGI:4946896|PMID:21185280) RGD PMID:21185280 MGI:4946896 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Fgf18 fibroblast growth factor 18 IEA
ISO
GO_REF:0000107
MGI:2178751 (MGI:3703411|PMID:17014841)
Ensembl
RGD
PMID:17014841 GO_REF:0000107, MGI:3703411 NCBI chr10:18,047,109...18,082,290
Ensembl chr10:18,047,109...18,063,391
JBrowse link
G Foxc1 forkhead box C1 ISO (MGI:5641778|PMID:25808752) RGD PMID:25808752 MGI:5641778 NCBI chr17:33,947,501...33,951,484
Ensembl chr17:33,947,506...33,951,484
JBrowse link
G Gnas GNAS complex locus ISO MGI:3043361 (MGI:3619837|PMID:15797856) RGD PMID:15797856 MGI:3619837 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 ISO MGI:1934892 (MGI:1349497|PMID:10579729) RGD PMID:10579729 MGI:1349497 NCBI chr 5:155,812,096...155,913,751 JBrowse link
G Ift80 intraflagellar transport 80 ISO MGI:3665440|MGI:5818514 (MGI:5817320|PMID:26098911) RGD PMID:26098911 MGI:5817320 NCBI chr 2:165,506,878...165,600,748
Ensembl chr 2:165,505,810...165,600,748
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:23273569)
Ensembl
UniProt
RGD
PMID:23273569 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:166,898,177...166,912,524
Ensembl chr 1:166,899,894...166,912,524
JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISO
GO_REF:0000107
MGI:99533 (MGI:3701381|PMID:17336904)
Ensembl
RGD
PMID:17336904 GO_REF:0000107, MGI:3701381 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mef2d myocyte enhancer factor 2D IEA
ISO
GO_REF:0000107
MGI:99458 (MGI:3701381|PMID:17336904)
Ensembl
RGD
PMID:17336904 GO_REF:0000107, MGI:3701381 NCBI chr 2:187,511,775...187,541,285
Ensembl chr 2:187,512,164...187,538,026
JBrowse link
G Mmp13 matrix metallopeptidase 13 IEP
ISO
IEA
(MGI:3771509|PMID:17987127)
GO_REF:0000107
RGD
Ensembl
PMID:17987127, PMID:10646117 GO_REF:0000107, MGI:3771509, RGD:10043159 NCBI chr 8:5,522,739...5,533,018
Ensembl chr 8:5,522,739...5,533,018
JBrowse link
G Mmp14 matrix metallopeptidase 14 ISO MGI:1276107 (MGI:3771253|PMID:18022611) RGD PMID:18022611 MGI:3771253 NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
JBrowse link
G Mmp16 matrix metallopeptidase 16 IEA
ISO
GO_REF:0000107
MGI:2445723 (MGI:3771253|PMID:18022611)
Ensembl
RGD
PMID:18022611 GO_REF:0000107, MGI:3771253 NCBI chr 5:31,568,344...31,818,368
Ensembl chr 5:31,568,419...31,810,484
JBrowse link
G Nab1 Ngfi-A binding protein 1 ISO MGI:107563 (MGI:3583879|PMID:16136673) RGD PMID:16136673 MGI:3583879 NCBI chr 9:53,906,073...53,945,474
Ensembl chr 9:53,906,073...53,945,473
JBrowse link
G Nab2 Ngfi-A binding protein 2 ISO MGI:107564 (MGI:3583879|PMID:16136673) RGD PMID:16136673 MGI:3583879 NCBI chr 7:70,963,580...70,971,471
Ensembl chr 7:70,961,575...70,969,905
JBrowse link
G Pex7 peroxisomal biogenesis factor 7 ISO MGI:3052739 (MGI:3052413|PMID:12915479) RGD PMID:12915479 MGI:3052413 NCBI chr 1:15,311,768...15,374,702
Ensembl chr 1:15,311,770...15,374,850
JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 ISO MGI:5049904 (MGI:5049900|PMID:20684022) RGD PMID:20684022 MGI:5049900 NCBI chr10:83,635,557...83,643,862
Ensembl chr10:83,636,518...83,643,859
JBrowse link
G Pthlh parathyroid hormone-like hormone ISO MGI:2154515 (MGI:1352921|PMID:8895385) RGD PMID:8895385 MGI:1352921 NCBI chr 4:181,663,425...181,674,181 JBrowse link
G Runx2 RUNX family transcription factor 2 IEA
ISO
GO_REF:0000107
MGI:2176466 (MGI:1332911|PMID:10072783)
Ensembl
RGD
PMID:10072783 GO_REF:0000107, MGI:1332911 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Scx scleraxis bHLH transcription factor ISO (MGI:4418577|PMID:20059955) RGD PMID:20059955 MGI:4418577 NCBI chr 7:117,519,075...117,521,093
Ensembl chr 7:117,519,075...117,521,093
JBrowse link
G Sik3 SIK family kinase 3 ISO MGI:5317918 (MGI:5316542|PMID:22318228) RGD PMID:22318228 MGI:5316542 NCBI chr 8:50,310,263...50,520,284
Ensembl chr 8:50,310,405...50,520,173
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 IEA
ISO
GO_REF:0000107
MGI:1856877|MGI:3575405 (MGI:3715574|PMID:17591962), (MGI:5293259|PMID:21788370), (MGI:5582670|PMID:24505141)
Ensembl
RGD
PMID:17591962, PMID:21788370, PMID:24505141 GO_REF:0000107, MGI:3715574, MGI:5293259, MGI:5582670 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Tek TEK receptor tyrosine kinase IEP RGD PMID:11735002 RGD:1601509 NCBI chr 5:113,725,717...113,852,799
Ensembl chr 5:113,725,717...113,852,799
JBrowse link
G Tmem119 transmembrane protein 119 ISO (MGI:5543589|PMID:22416756) RGD PMID:22416756 MGI:5543589 NCBI chr12:48,598,498...48,605,704
Ensembl chr12:48,598,647...48,605,704
JBrowse link
intramembranous ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 IEA
ISO
GO_REF:0000107
MGI:3579503 (MGI:3578608|PMID:15790973)
Ensembl
RGD
PMID:15790973 GO_REF:0000107, MGI:3578608 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642
JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO MGI:97009 (MGI:3710444|PMID:17440987) RGD PMID:17440987 MGI:3710444 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Ctsk cathepsin K IEP RGD PMID:16193234 RGD:1601024 NCBI chr 2:196,655,469...196,666,447
Ensembl chr 2:196,655,469...196,666,446
JBrowse link
G Fgf18 fibroblast growth factor 18 IEA
ISO
GO_REF:0000107
MGI:2178751 (MGI:3703411|PMID:17014841)
Ensembl
RGD
PMID:17014841 GO_REF:0000107, MGI:3703411 NCBI chr10:18,047,109...18,082,290
Ensembl chr10:18,047,109...18,063,391
JBrowse link
G Mmp2 matrix metallopeptidase 2 IEA
ISO
GO_REF:0000107
MGI:88467 (MGI:3710444|PMID:17440987)
Ensembl
RGD
PMID:17440987 GO_REF:0000107, MGI:3710444 NCBI chr19:15,542,771...15,570,589
Ensembl chr19:15,542,765...15,570,611
JBrowse link
G Mn1 MN1 proto-oncogene, transcriptional regulator ISO MGI:3580381 (MGI:3580209|PMID:15870292) RGD PMID:15870292 MGI:3580209 NCBI chr12:51,214,192...51,250,230
Ensembl chr12:51,214,192...51,250,230
JBrowse link
negative regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahsg alpha-2-HS-glycoprotein IMP
ISO
ISS
(MGI:3687916|PMID:12556469)
GO_REF:0000024
RGD
UniProt
PMID:12556469, PMID:8702833 GO_REF:0000024, MGI:3687916, RGD:1626074 NCBI chr11:81,711,269...81,717,594 JBrowse link
G Bcor BCL6 co-repressor ISO (PMID:19578371) RGD PMID:19578371 NCBI chr  X:11,570,155...11,692,022
Ensembl chr  X:11,648,989...11,691,099
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 ISO (PMID:21403648) RGD PMID:21403648 NCBI chr10:70,869,516...70,871,066
Ensembl chr10:70,869,513...70,871,066
JBrowse link
G Ccr1 C-C motif chemokine receptor 1 ISO (PMID:21403648) RGD PMID:21403648 NCBI chr 8:132,996,646...133,002,201
Ensembl chr 8:132,996,649...133,002,201
JBrowse link
G Ecm1 extracellular matrix protein 1 ISO
ISS
(PMID:11165938)
GO_REF:0000024
RGD
UniProt
PMID:11165938 GO_REF:0000024 NCBI chr 2:197,855,468...197,860,973
Ensembl chr 2:197,855,460...197,860,699
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISS
ISO
GO_REF:0000024
(MGI:5607146|PMID:25479107), (MGI:6220772|PMID:30111653), (MGI:6294341|PMID:22510396)
UniProt
RGD
PMID:22510396, PMID:25479107, PMID:30111653 GO_REF:0000024, MGI:5607146, MGI:6220772, MGI:6294341 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371
JBrowse link
G Fgf23 fibroblast growth factor 23 ISO (PMID:18282132) RGD PMID:18282132 NCBI chr 4:159,622,404...159,630,082
Ensembl chr 4:159,622,404...159,630,082
JBrowse link
G Gata1 GATA binding protein 1 ISO MGI:2177586 (MGI:3653541|PMID:15005853) RGD PMID:15005853 MGI:3653541 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO (PMID:15539560) RGD PMID:15539560 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEA
ISO
GO_REF:0000107
MGI:1857719 (MGI:3777866|PMID:17181398)
Ensembl
RGD
PMID:17181398 GO_REF:0000107, MGI:3777866 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 ISO MGI:2180017 (MGI:2178869|PMID:11790802) RGD PMID:11790802 MGI:2178869 NCBI chr 1:221,099,155...221,116,096
Ensembl chr 1:221,099,998...221,116,096
JBrowse link
G Mepe matrix extracellular phosphoglycoprotein ISO MGI:2448895 (MGI:2448336|PMID:12421822), (MGI:3851320|PMID:15843468), (MGI:5431257|PMID:22766095) RGD PMID:12421822, PMID:15843468, PMID:22766095 MGI:2448336, MGI:3851320, MGI:5431257 NCBI chr14:6,782,011...6,793,561
Ensembl chr14:6,782,012...6,793,558
JBrowse link
G Nfe2 nuclear factor, erythroid 2 ISO MGI:1857224 (MGI:3653541|PMID:15005853) RGD PMID:15005853 MGI:3653541 NCBI chr 7:144,872,739...144,880,092
Ensembl chr 7:144,872,747...144,880,092
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISS
ISO
GO_REF:0000024
(MGI:3713957|PMID:17537919)
UniProt
RGD
PMID:17537919 GO_REF:0000024, MGI:3713957 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO MGI:2158693 (MGI:2135696|PMID:11371614) RGD PMID:11371614 MGI:2135696 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Srgn serglycin ISO
IBA
ISS
(PMID:16870619)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:16870619, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:32,120,317...32,158,071
Ensembl chr20:32,120,320...32,139,789
JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 IMP RGD PMID:23081848 RGD:10003033 NCBI chr 1:101,293,300...101,323,484
Ensembl chr 1:101,293,409...101,323,960
JBrowse link
negative regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grem1 gremlin 1, DAN family BMP antagonist ISO (PMID:15539560) RGD PMID:15539560 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Pth parathyroid hormone IMP PMID:11604398 CAFA PMID:11604398 RGD:12793028 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Rflna refilin A IBA
ISO
PMID:21873635
MGI:1923816 (MGI:5570967|PMID:24436304)
RGD PMID:24436304, PMID:21873635 MGI:5570967, RGD:13792537 NCBI chr12:37,038,732...37,047,628
Ensembl chr12:37,038,733...37,047,628
JBrowse link
G Rflnb refilin B IBA
ISO
PMID:21873635
MGI:1920371 (MGI:5570967|PMID:24436304)
RGD PMID:24436304, PMID:21873635 MGI:5570967, RGD:13792537 NCBI chr10:64,196,103...64,202,380
Ensembl chr10:64,196,127...64,202,380
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in osteoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnn tenascin N ISO (MGI:3710297|PMID:17395156) RGD PMID:17395156 MGI:3710297 NCBI chr13:77,829,384...77,896,831
Ensembl chr13:77,829,382...77,896,697
JBrowse link
negative regulation of ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 IMP RGD PMID:16177600 RGD:1598747 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
(MGI:85084|PMID:9008714)
Ensembl
RGD
PMID:9008714 GO_REF:0000107, MGI:85084 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Calca calcitonin-related polypeptide alpha ISO MGI:3527257 (MGI:2447255|PMID:12488435), (MGI:3653805|PMID:15537449) RGD PMID:12488435, PMID:15537449 MGI:2447255, MGI:3653805 NCBI chr 1:184,184,018...184,188,922
Ensembl chr 1:184,184,020...184,188,911
JBrowse link
G Calcr calcitonin receptor IEA
ISO
GO_REF:0000107
MGI:3038975 (MGI:3037515|PMID:14970190)
Ensembl
RGD
PMID:14970190 GO_REF:0000107, MGI:3037515 NCBI chr 4:28,627,439...28,702,559
Ensembl chr 4:28,627,442...28,702,559
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 ISO (PMID:21129727) RGD PMID:21129727 NCBI chr 1:127,010,587...127,071,570
Ensembl chr 1:127,010,588...127,071,570
JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 IMP
ISO
(MGI:3803396|PMID:18505822) RGD PMID:18505822, PMID:21773994 MGI:3803396, RGD:6907379 NCBI chr 1:248,952,896...248,956,579
Ensembl chr 1:248,895,738...248,898,607
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO MGI:1857079 (MGI:1270097|PMID:9662402) RGD PMID:9662402 MGI:1270097 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371
JBrowse link
G Gfra4 GDNF family receptor alpha 4 ISO MGI:3625130 (MGI:3623870|PMID:16497798) RGD PMID:16497798 MGI:3623870 NCBI chr 3:123,573,394...123,582,431
Ensembl chr 3:123,578,997...123,581,518
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO (MGI:5300390|PMID:22081627) RGD PMID:22081627 MGI:5300390 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Kremen1 kringle containing transmembrane protein 1 IEA
ISO
GO_REF:0000107
(MGI:3803396|PMID:18505822)
Ensembl
RGD
PMID:18505822 GO_REF:0000107, MGI:3803396 NCBI chr14:85,441,209...85,503,661
Ensembl chr14:85,438,707...85,484,275
JBrowse link
G Kremen2 kringle containing transmembrane protein 2 ISO (MGI:3803396|PMID:18505822) RGD PMID:18505822 MGI:3803396 NCBI chr10:13,076,042...13,081,210
Ensembl chr10:13,076,679...13,081,136
JBrowse link
G Lrp4 LDL receptor related protein 4 ISO (PMID:21471202) RGD PMID:21471202 NCBI chr 3:80,362,643...80,416,684
Ensembl chr 3:80,362,858...80,416,679
JBrowse link
G Mdk midkine ISS
ISO
GO_REF:0000024
(MGI:5780844|PMID:20200993)
UniProt
RGD
PMID:20200993 GO_REF:0000024, MGI:5780844 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Mef2c myocyte enhancer factor 2C ISO
IEA
ISS
(PMID:17696759)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17696759 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:5437413|PMID:21493891) RGD PMID:21493891 MGI:5437413 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G P2ry2 purinergic receptor P2Y2 IDA RGD PMID:12210747 RGD:729594 NCBI chr 1:166,031,228...166,045,423
Ensembl chr 1:166,031,272...166,037,424
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:17537919 RGD:1642610 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region ISO (MGI:5437413|PMID:21493891) RGD PMID:21493891 MGI:5437413 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO (PMID:15677765), (PMID:19254787)
(MGI:3850611|PMID:19254787)
RGD PMID:15677765, PMID:19254787 MGI:3850611 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Smad6 SMAD family member 6 ISO (MGI:1352979|PMID:10655064) RGD PMID:10655064 MGI:1352979 NCBI chr 8:68,897,746...68,967,221
Ensembl chr 8:68,898,296...68,966,108
JBrowse link
G Smad7 SMAD family member 7 IEA
ISO
GO_REF:0000107
(MGI:6377914|PMID:29503843)
Ensembl
RGD
PMID:29503843 GO_REF:0000107, MGI:6377914 NCBI chr18:71,395,830...71,424,164
Ensembl chr18:71,395,830...71,424,157
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ISO MGI:3576775 (MGI:3575204|PMID:15820682) RGD PMID:15820682 MGI:3575204 NCBI chr12:11,433,815...11,526,465
Ensembl chr12:11,407,213...11,526,465
JBrowse link
G Sost sclerostin ISO MGI:5544793 (MGI:5509072|PMID:23918385) RGD PMID:23918385 MGI:5509072 NCBI chr10:89,897,087...89,900,131
Ensembl chr10:89,897,087...89,900,131
JBrowse link
G Sox9 SRY-box transcription factor 9 ISS
ISO
GO_REF:0000024
(MGI:4947506|PMID:20056916)
(PMID:29503843)
UniProt
RGD
PMID:20056916, PMID:29503843 GO_REF:0000024, MGI:4947506 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO (MGI:3575204|PMID:15820682) RGD PMID:15820682 MGI:3575204 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tph1 tryptophan hydroxylase 1 IMP RGD PMID:20139991 RGD:5686362 NCBI chr 1:102,669,868...102,699,442
Ensembl chr 1:102,669,868...102,699,442
JBrowse link
negative regulation of osteoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor IDA RGD PMID:12193573 RGD:625678 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Areg amphiregulin IDA RGD PMID:15509566 RGD:1578718 NCBI chr14:18,521,921...18,531,179
Ensembl chr14:18,521,930...18,531,179
JBrowse link
G Axin2 axin 2 IEA
ISO
GO_REF:0000107
MGI:3579503 (MGI:3578608|PMID:15790973)
Ensembl
RGD
PMID:15790973 GO_REF:0000107, MGI:3578608 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642
JBrowse link
G Bambi BMP and activin membrane-bound inhibitor ISO
IEA
(PMID:21042576), (PMID:21743293)
GO_REF:0000107
RGD
Ensembl
PMID:21042576, PMID:21743293 GO_REF:0000107 NCBI chr17:56,905,419...56,909,675
Ensembl chr17:56,905,112...56,909,992
JBrowse link
G Cdk6 cyclin-dependent kinase 6 ISO (PMID:15254224) RGD PMID:15254224 NCBI chr 4:27,781,728...27,969,653
Ensembl chr 4:27,785,647...27,966,398
JBrowse link
G Chrd chordin ISO
IEA
(PMID:18533030)
(MGI:3577114|PMID:15780974)
GO_REF:0000107
RGD
Ensembl
PMID:15780974, PMID:18533030 GO_REF:0000107, MGI:3577114 NCBI chr11:83,858,503...83,867,543
Ensembl chr11:83,858,503...83,867,203
JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 ISO (MGI:4410428|PMID:18187554) RGD PMID:18187554 MGI:4410428 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692
JBrowse link
G Crim1 cysteine rich transmembrane BMP regulator 1 ISO
IEA
(PMID:21042576), (PMID:21743293)
GO_REF:0000107
RGD
Ensembl
PMID:21042576, PMID:21743293 GO_REF:0000107 NCBI chr 6:788,490...962,663
Ensembl chr 6:788,548...960,703
JBrowse link
G Fgf23 fibroblast growth factor 23 ISO (PMID:18282132) RGD PMID:18282132 NCBI chr 4:159,622,404...159,630,082
Ensembl chr 4:159,622,404...159,630,082
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:18690792 RGD:2325179 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fndc3b fibronectin type III domain containing 3B ISO MGI:4822558 (MGI:4818857|PMID:20493170) RGD PMID:20493170 MGI:4818857 NCBI chr 2:113,109,949...113,415,171
Ensembl chr 2:113,112,902...113,345,577
JBrowse link
G Gdf10 growth differentiation factor 10 IEA
ISO
ISS
GO_REF:0000107
(MGI:5545973|PMID:21712809)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21712809 GO_REF:0000024, GO_REF:0000107, MGI:5545973 NCBI chr16:10,250,508...10,262,383
Ensembl chr16:10,250,404...10,263,150
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO
IMP
ISS
(PMID:27036124)
PMID:27910957
GO_REF:0000024
RGD
UniProt
PMID:27036124, PMID:27910957 GO_REF:0000024, RGD:38501075 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 IEA
ISO
GO_REF:0000107
MGI:2653307 (MGI:3830408|PMID:19144722)
Ensembl
RGD
PMID:19144722 GO_REF:0000107, MGI:3830408 NCBI chr16:36,371,489...36,373,551
Ensembl chr16:36,371,489...36,373,546
JBrowse link
G Hdac4 histone deacetylase 4 ISO (MGI:3584056|PMID:15990875) RGD PMID:15990875 MGI:3584056 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Hdac5 histone deacetylase 5 ISO (MGI:3584056|PMID:15990875) RGD PMID:15990875 MGI:3584056 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hdac7 histone deacetylase 7 IEA
ISO
GO_REF:0000107
(PMID:17997710)
Ensembl
RGD
PMID:17997710 GO_REF:0000107 NCBI chr 7:139,280,396...139,319,108
Ensembl chr 7:139,281,187...139,318,455
JBrowse link
G Hdac8 histone deacetylase 8 IMP RGD PMID:25019367 RGD:13208813 NCBI chr  X:72,163,777...72,370,058
Ensembl chr  X:72,163,777...72,370,044
JBrowse link
G Hoxa2 homeobox A2 ISO (MGI:4948784|PMID:21324897) RGD PMID:21324897 MGI:4948784 NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein ISO MGI:1321394 (MGI:3050935|PMID:15161906) RGD PMID:15161906 MGI:3050935 NCBI chr 3:148,214,623...148,216,715
Ensembl chr 3:148,215,540...148,216,718
JBrowse link
G Id2 inhibitor of DNA binding 2 ISO MGI:1321394 (MGI:3050908|PMID:15246553) RGD PMID:15246553 MGI:3050908 NCBI chr 6:44,360,077...44,361,908
Ensembl chr 6:44,348,501...44,363,915
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein ISO MGI:1321394 (MGI:3050935|PMID:15161906) RGD PMID:15161906 MGI:3050935 NCBI chr 5:154,489,603...154,491,172
Ensembl chr 5:154,489,590...154,491,223
JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 ISO MGI:87986|MGI:88177 (MGI:3837587|PMID:19208758) RGD PMID:19208758 MGI:3837587 NCBI chr 9:80,154,230...80,166,813
Ensembl chr 9:80,150,211...80,167,033
JBrowse link
G Limd1 LIM domains containing 1 ISS
ISO
GO_REF:0000024
(MGI:3807091|PMID:18657804)
UniProt
RGD
PMID:18657804 GO_REF:0000024, MGI:3807091 NCBI chr 8:132,553,218...132,598,826
Ensembl chr 8:132,553,218...132,598,812
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO (PMID:17680723) RGD PMID:17680723 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Men1 menin 1 ISO MGI:1316736 (PMID:15563473)
MGI:96648 (MGI:3056877|PMID:15150273), (MGI:3573815|PMID:15563473)
RGD PMID:15150273, PMID:15563473 MGI:3056877, MGI:3573815 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Mir125a microRNA 125a IMP RGD PMID:29319166 RGD:26884461 NCBI chr 1:59,704,827...59,704,911
Ensembl chr 1:59,704,827...59,704,911
JBrowse link
G Mir133a1 microRNA 133a-1 ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr18:2,052,478...2,052,564 JBrowse link
G Mir137 microRNA 137 ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr 2:221,658,106...221,658,207
Ensembl chr 2:221,658,106...221,658,207
JBrowse link
G Mir204 microRNA 204 IMP
ISO
(MGI:5013854|PMID:21628588) RGD PMID:21628588, PMID:29319166 MGI:5013854, RGD:26884461 NCBI chr 1:240,403,000...240,403,109
Ensembl chr 1:240,403,000...240,403,109
JBrowse link
G Mir205 microRNA 205 ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr13:112,233,283...112,233,390
Ensembl chr13:112,233,283...112,233,390
JBrowse link
G Mir217 microRNA 217 ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr14:113,119,529...113,119,633
Ensembl chr14:113,119,529...113,119,633
JBrowse link
G Mir23a microRNA 23a ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr19:25,318,582...25,318,656
Ensembl chr19:25,318,582...25,318,656
JBrowse link
G Mir30c1 microRNA 30c-1 ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr 5:139,699,877...139,699,965
Ensembl chr 5:139,699,877...139,699,965
JBrowse link
G Mir30c2 microRNA 30c-2 ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr 9:29,562,376...29,562,459
Ensembl chr 9:29,562,376...29,562,459
JBrowse link
G Nbr1 NBR1, autophagy cargo receptor IEA
ISO
GO_REF:0000107
(MGI:4818844|PMID:20616007)
Ensembl
RGD
PMID:20616007 GO_REF:0000107, MGI:4818844 NCBI chr10:89,455,202...89,483,791
Ensembl chr10:89,459,650...89,484,080
JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 ISO (MGI:4398991|PMID:19463978) RGD PMID:19463978 MGI:4398991 NCBI chr18:77,203,517...77,322,690
Ensembl chr18:77,203,525...77,322,690
JBrowse link
G Noct nocturnin ISS
ISO
GO_REF:0000024
(MGI:4457955|PMID:20498072)
UniProt
RGD
PMID:20498072 GO_REF:0000024, MGI:4457955 NCBI chr 2:140,286,661...140,306,869
Ensembl chr 2:140,286,661...140,306,869
JBrowse link
G Nog noggin ISO
IEA
(PMID:20675382)
GO_REF:0000107
RGD
Ensembl
PMID:20675382 GO_REF:0000107 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Notch1 notch receptor 1 ISO (MGI:4412151|PMID:19695258) RGD PMID:19695258 MGI:4412151 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Ostn osteocrin ISO (MGI:2683819|PMID:14523025) RGD PMID:14523025 MGI:2683819 NCBI chr11:76,851,923...76,888,140
Ensembl chr11:76,851,322...76,888,178
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO
IEA
(PMID:21042576), (PMID:21743293)
GO_REF:0000107
RGD
Ensembl
PMID:21042576, PMID:21743293 GO_REF:0000107 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Ptch1 patched 1 ISO (PMID:16229683) RGD PMID:16229683 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Ranbp3l RAN binding protein 3-like ISO (MGI:5883200|PMID:25755279) RGD PMID:25755279 MGI:5883200 NCBI chr 2:58,221,773...58,458,072
Ensembl chr 2:58,448,917...58,458,517
JBrowse link
G Riox1 ribosomal oxygenase 1 ISO (MGI:4418587|PMID:19927124) RGD PMID:19927124 MGI:4418587 NCBI chr 6:107,428,508...107,431,126
Ensembl chr 6:107,428,508...107,431,116
JBrowse link
G Rorb RAR-related orphan receptor B IEA
ISO
ISS
GO_REF:0000107
(MGI:5554363|PMID:22189870)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22189870 GO_REF:0000024, GO_REF:0000107, MGI:5554363 NCBI chr 1:234,252,757...234,442,597
Ensembl chr 1:234,252,757...234,435,839
JBrowse link
G Sema4d semaphorin 4D ISO (MGI:5297297|PMID:22019888) RGD PMID:22019888 MGI:5297297 NCBI chr17:13,516,276...13,538,513
Ensembl chr17:13,488,376...13,553,974
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IEA
ISO
GO_REF:0000107
MGI:3045799 (MGI:3040721|PMID:14976225)
Ensembl
RGD
PMID:14976225 GO_REF:0000107, MGI:3040721 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Ski SKI proto-oncogene ISO (PMID:14699069) RGD PMID:14699069 NCBI chr 5:172,556,196...172,623,878
Ensembl chr 5:172,559,135...172,623,899
JBrowse link
G Smad3 SMAD family member 3 ISO MGI:1316736 (MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:3056877 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Smad6 SMAD family member 6 ISO (PMID:22275001) RGD PMID:22275001 NCBI chr 8:68,897,746...68,967,221
Ensembl chr 8:68,898,296...68,966,108
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:3577701|PMID:15781477) RGD PMID:15781477 MGI:3577701 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Sox9 SRY-box transcription factor 9 ISS
ISO
GO_REF:0000024
(MGI:5317468|PMID:22421045), (MGI:6323929|PMID:31121357), (MGI:6414737|PMID:32103177)
UniProt
RGD
PMID:22421045, PMID:31121357, PMID:32103177 GO_REF:0000024, MGI:5317468, MGI:6323929, MGI:6414737 NCBI chr10:101,288,528...101,294,030
Ensembl chr10:101,288,489...101,293,379
JBrowse link
G Tmem64 transmembrane protein 64 ISO (MGI:5643786|PMID:25979161) RGD PMID:25979161 MGI:5643786 NCBI chr 5:28,850,864...28,898,203
Ensembl chr 5:28,850,950...28,867,227
JBrowse link
G Tnf tumor necrosis factor ISO (MGI:5285024|PMID:21689636) RGD PMID:21689636 MGI:5285024 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnn tenascin N ISO (MGI:3710297|PMID:17395156) RGD PMID:17395156 MGI:3710297 NCBI chr13:77,829,384...77,896,831
Ensembl chr13:77,829,382...77,896,697
JBrowse link
G Tob1 transducer of ErbB-2.1 IEA
ISO
GO_REF:0000107
MGI:1933294 (MGI:1928565|PMID:11163184)
Ensembl
RGD
PMID:11163184 GO_REF:0000107, MGI:1928565 NCBI chr10:81,913,689...81,915,727
Ensembl chr10:81,913,689...81,915,716
JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 IMP RGD PMID:23081848 RGD:10003033 NCBI chr 1:101,293,300...101,323,484
Ensembl chr 1:101,293,409...101,323,960
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:16888803)
(MGI:3042355|PMID:15030764)
RGD PMID:15030764, PMID:16888803 MGI:3042355 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Twist2 twist family bHLH transcription factor 2 ISO
ISS
(PMID:11062344)
MGI:3044412 (MGI:3042355|PMID:15030764)
GO_REF:0000024
RGD
UniProt
PMID:11062344, PMID:15030764 GO_REF:0000024, MGI:3042355 NCBI chr 9:98,924,134...98,968,510
Ensembl chr 9:98,924,134...98,968,510
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 ISO (MGI:3577114|PMID:15780974) RGD PMID:15780974 MGI:3577114 NCBI chr 9:113,699,151...113,732,601
Ensembl chr 9:113,699,170...113,732,622
JBrowse link
G Ucma upper zone of growth plate and cartilage matrix associated ISO (MGI:3784758|PMID:18156182) RGD PMID:18156182 MGI:3784758 NCBI chr17:77,252,099...77,262,301
Ensembl chr17:77,252,100...77,261,731
JBrowse link
G Vegfc vascular endothelial growth factor C ISO (MGI:6378108|PMID:26934950) RGD PMID:26934950 MGI:6378108 NCBI chr16:40,440,371...40,555,178
Ensembl chr16:40,440,207...40,555,576
JBrowse link
ossification involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dchs1 dachsous cadherin-related 1 ISO MGI:4867020 (MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:4939936 NCBI chr 1:170,594,981...170,629,062
Ensembl chr 1:170,594,822...170,628,915
JBrowse link
G Fat4 FAT atypical cadherin 4 ISO MGI:3846573 (MGI:4939936|PMID:21303848) RGD PMID:21303848 MGI:4939936 NCBI chr 2:125,751,818...125,879,398
Ensembl chr 2:125,752,130...125,879,387
JBrowse link
G Plxnb1 plexin B1 ISO (MGI:5297297|PMID:22019888) RGD PMID:22019888 MGI:5297297 NCBI chr 8:117,832,826...117,858,515
Ensembl chr 8:117,836,701...117,856,689
JBrowse link
G Rhoa ras homolog family member A ISO (MGI:5297297|PMID:22019888) RGD PMID:22019888 MGI:5297297 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Ryr1 ryanodine receptor 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:3764002|PMID:18003898)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18003898 GO_REF:0000024, GO_REF:0000107, MGI:3764002 NCBI chr 1:87,959,596...88,066,252
Ensembl chr 1:87,959,712...88,066,101
JBrowse link
G Sema4d semaphorin 4D ISO
IBA
(PMID:22019888)
(MGI:5297297|PMID:22019888)
PMID:21873635
RGD PMID:22019888, PMID:21873635 MGI:5297297, RGD:13792537 NCBI chr17:13,516,276...13,538,513
Ensembl chr17:13,488,376...13,553,974
JBrowse link
G Thbs3 thrombospondin 3 ISO MGI:3581964 (MGI:3581317|PMID:15964815) RGD PMID:15964815 MGI:3581317 NCBI chr 2:188,528,979...188,540,738
Ensembl chr 2:188,528,979...188,540,736
JBrowse link
G Xylt1 xylosyltransferase 1 ISS
ISO
GO_REF:0000024
(MGI:5544658|PMID:24161523)
UniProt
RGD
PMID:24161523 GO_REF:0000024, MGI:5544658 NCBI chr 1:186,939,698...187,264,758
Ensembl chr 1:187,149,453...187,261,632
JBrowse link
ossification involved in bone remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 ISO MGI:3830252 (MGI:3829514|PMID:18779865) RGD PMID:18779865 MGI:3829514 NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
JBrowse link
G Gdf5 growth differentiation factor 5 IEP RGD PMID:10404008 RGD:2289026 NCBI chr 3:151,482,672...151,487,129
Ensembl chr 3:151,483,249...151,486,693
JBrowse link
G Ptn pleiotrophin ISS
ISO
GO_REF:0000024
(PMID:19442624)
UniProt
RGD
PMID:19442624 GO_REF:0000024 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO
ISS
(PMID:17401695)
GO_REF:0000024
RGD
AgBase
PMID:17401695 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb3 transforming growth factor, beta 3 ISO
ISS
(PMID:17401695)
GO_REF:0000024
RGD
AgBase
PMID:17401695 GO_REF:0000024 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
osteoblast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034833.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:53,872...54,885 JBrowse link
G AABR07071701.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:126,975,833...126,976,850 JBrowse link
G Ache acetylcholinesterase ISO
IEA
(PMID:15454088)
GO_REF:0000107
RGD
Ensembl
PMID:15454088 GO_REF:0000107 NCBI chr12:22,472,358...22,477,052
Ensembl chr12:22,472,358...22,478,753
JBrowse link
G Bglap bone gamma-carboxyglutamate protein IEP RGD PMID:20020468 RGD:2316141 NCBI chr 2:187,741,770...187,748,445
Ensembl chr 2:187,741,770...187,742,747
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha IEP RGD PMID:1377818 RGD:69946 NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164
JBrowse link
G Clec5a C-type lectin domain containing 5A ISO (MGI:3839503|PMID:19251634) RGD PMID:19251634 MGI:3839503 NCBI chr 4:68,810,330...68,819,921
Ensembl chr 4:68,808,359...68,819,928
JBrowse link
G Esr1 estrogen receptor 1 IEP RGD PMID:9528993 RGD:2313676 NCBI chr 1:41,192,029...41,594,799
Ensembl chr 1:41,192,824...41,594,796
JBrowse link
G Gli2 GLI family zinc finger 2 ISO (MGI:3653954|PMID:16880529) RGD PMID:16880529 MGI:3653954 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Hdac4 histone deacetylase 4 ISO (MGI:3584056|PMID:15990875) RGD PMID:15990875 MGI:3584056 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Hdac5 histone deacetylase 5 ISO (MGI:3584056|PMID:15990875) RGD PMID:15990875 MGI:3584056 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISO MGI:99829 (MGI:3836510|PMID:18986983) RGD PMID:18986983 MGI:3836510 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Hoxa2 homeobox A2 ISO MGI:2679336 (MGI:3692344|PMID:16751105) RGD PMID:16751105 MGI:3692344 NCBI chr 4:82,130,441...82,134,846
Ensembl chr 4:82,131,329...82,133,605
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit ISO MGI:1316736 (MGI:3573815|PMID:15563473) RGD PMID:15563473 MGI:3573815 NCBI chr16:20,485,028...20,486,707
Ensembl chr16:20,485,029...20,486,707
JBrowse link
G Limd1 LIM domains containing 1 ISS
ISO
GO_REF:0000024
(MGI:3698661|PMID:17092936), (MGI:3807091|PMID:18657804)
UniProt
RGD
PMID:17092936, PMID:18657804 GO_REF:0000024, MGI:3698661, MGI:3807091 NCBI chr 8:132,553,218...132,598,826
Ensembl chr 8:132,553,218...132,598,812
JBrowse link
G LOC102554748 nidogen-2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:380,313...427,615
Ensembl chr 7:380,741...381,732
JBrowse link
G Lrp5 LDL receptor related protein 5 IBA
ISO
PMID:21873635
MGI:3612485 (MGI:3694400|PMID:16790443), (MGI:4835143|PMID:17700537)
RGD PMID:16790443, PMID:17700537, PMID:21873635 MGI:3694400, MGI:4835143, RGD:13792537 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Men1 menin 1 ISO MGI:1316736 (PMID:15563473)
MGI:1201674|MGI:96648 (MGI:3056877|PMID:15150273), (MGI:3573815|PMID:15563473)
RGD PMID:15150273, PMID:15563473 MGI:3056877, MGI:3573815 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Msx2 msh homeobox 2 IEP
ISO
IEA
MGI:1926381 (MGI:1355063|PMID:10742104)
GO_REF:0000107
RGD
Ensembl
PMID:10742104, PMID:11336915 GO_REF:0000107, MGI:1355063, RGD:5132630 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Pth1r parathyroid hormone 1 receptor ISO MGI:2154519 (MGI:3624906|PMID:9832460) RGD PMID:9832460 MGI:3624906 NCBI chr 8:118,984,531...119,012,803
Ensembl chr 8:118,988,053...119,012,671
JBrowse link
G Pthlh parathyroid hormone-like hormone TAS
ISO
IBA
MGI:2154515 (MGI:3624906|PMID:9832460)
PMID:21873635
RGD PMID:9832460, PMID:12706025, PMID:21873635 MGI:3624906, RGD:1601570, RGD:13792537 NCBI chr 4:181,663,425...181,674,181 JBrowse link
G Runx2 RUNX family transcription factor 2 IEA
ISO
GO_REF:0000107
MGI:1341800 (MGI:3836510|PMID:18986983)
Ensembl
RGD
PMID:18986983 GO_REF:0000107, MGI:3836510 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Satb2 SATB homeobox 2 ISO MGI:3692768|MGI:96174 (MGI:3692344|PMID:16751105) RGD PMID:16751105 MGI:3692344 NCBI chr 9:63,456,877...63,642,193
Ensembl chr 9:63,456,783...63,641,400
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
(MGI:3653954|PMID:16880529)
Ensembl
RGD
PMID:16880529 GO_REF:0000107, MGI:3653954 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Smad3 SMAD family member 3 ISO MGI:1316736 (MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:3056877 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Tnn tenascin N ISO (MGI:3710297|PMID:17395156) RGD PMID:17395156 MGI:3710297 NCBI chr13:77,829,384...77,896,831
Ensembl chr13:77,829,382...77,896,697
JBrowse link
osteoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 NOT ISO (MGI:5291888|PMID:21784188) RGD PMID:21784188 MGI:5291888 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Adar adenosine deaminase, RNA-specific IEA
ISO
GO_REF:0000107
MGI:2182767|MGI:3032439 (MGI:5464240|PMID:23123729)
Ensembl
RGD
PMID:23123729 GO_REF:0000107, MGI:5464240 NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO MGI:88177|MGI:96440 (MGI:3837587|PMID:19208758) RGD PMID:19208758 MGI:3837587 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Asf1a anti-silencing function 1A histone chaperone ISO MGI:1097686|MGI:1101768 (MGI:5430686|PMID:22705305) RGD PMID:22705305 MGI:5430686 NCBI chr20:34,894,419...34,909,265
Ensembl chr20:34,894,419...34,909,265
JBrowse link
G Bglap bone gamma-carboxyglutamate protein TAS
IBA
ISO
IEP
PMID:21873635
(PMID:17023519)
RGD PMID:17023519, PMID:15456860, PMID:21873635, PMID:20022632 RGD:1578394, RGD:13792537, RGD:2316140 NCBI chr 2:187,741,770...187,748,445
Ensembl chr 2:187,741,770...187,742,747
JBrowse link
G Bmp2 bone morphogenetic protein 2 IEA
ISO
GO_REF:0000107
MGI:101948|MGI:1922667|MGI:87986|MGI:88182|MGI:96440|MGI:99829 (MGI:3528208|PMID:15565649), (MGI:3607617|PMID:16109715), (MGI:3837587|PMID:19208758), (MGI:3850932|PMID:19213727)
(PMID:15150273), (PMID:22705305)
Ensembl
RGD
PMID:15150273, PMID:15565649, PMID:16109715, PMID:19208758, PMID:19213727, PMID:22705305 GO_REF:0000107, MGI:3528208, MGI:3607617, MGI:3837587, MGI:3850932 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Bmp3 bone morphogenetic protein 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:12,362,912...12,387,572
Ensembl chr14:12,359,363...12,387,102
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO
ISS
IEA
(PMID:17720811)
(MGI:3525426|PMID:15381701)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:15381701, PMID:17720811 GO_REF:0000024, GO_REF:0000107, MGI:3525426 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp6 bone morphogenetic protein 6 IEP
ISO
MGI:88177 (MGI:3607617|PMID:16109715) RGD PMID:16109715, PMID:11995934 MGI:3607617, RGD:2289023 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Bmp8a bone morphogenetic protein 8a ISO (MGI:5487540|PMID:12925636) RGD PMID:12925636 MGI:5487540 NCBI chr 5:141,007,462...141,033,511
Ensembl chr 5:141,007,462...141,033,511
JBrowse link
G Cbfb core-binding factor subunit beta ISO MGI:2447293 (MGI:2446761|PMID:12434156) RGD PMID:12434156 MGI:2446761 NCBI chr19:37,127,508...37,171,075
Ensembl chr19:37,127,508...37,171,069
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 ISO
ISS
(PMID:21403648)
GO_REF:0000024
RGD
UniProt
PMID:21403648 GO_REF:0000024 NCBI chr10:70,869,516...70,871,066
Ensembl chr10:70,869,513...70,871,066
JBrowse link
G Ccn1 cellular communication network factor 1 IEA
ISO
GO_REF:0000107
MGI:98956 (MGI:3620470|PMID:16581771)
Ensembl
RGD
PMID:16581771 GO_REF:0000107, MGI:3620470 NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
JBrowse link
G Ccn4 cellular communication network factor 4 IEA
ISO
GO_REF:0000107
(MGI:6294593|PMID:15331410)
Ensembl
RGD
PMID:15331410 GO_REF:0000107, MGI:6294593 NCBI chr 7:107,695,227...107,723,759
Ensembl chr 7:107,695,215...107,723,772
JBrowse link
G Chrd chordin IEA
ISO
GO_REF:0000107
(MGI:3525426|PMID:15381701)
Ensembl
RGD
PMID:15381701 GO_REF:0000107, MGI:3525426 NCBI chr11:83,858,503...83,867,543
Ensembl chr11:83,858,503...83,867,203
JBrowse link
G Col11a2 collagen type XI alpha 2 chain IEP RGD PMID:11780999 RGD:1342432 NCBI chr20:3,829,324...3,859,022
Ensembl chr20:3,830,164...3,859,018
JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO (PMID:16311053) RGD PMID:16311053 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 ISS
ISO
GO_REF:0000024
(MGI:4438316|PMID:19767743)
UniProt
RGD
PMID:19767743 GO_REF:0000024, MGI:4438316 NCBI chr 3:80,892,433...80,933,283
Ensembl chr 3:80,892,435...80,933,283
JBrowse link
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 ISO (PMID:17023519) RGD PMID:17023519 NCBI chr 3:168,097,484...168,111,920
Ensembl chr 3:168,097,485...168,111,920
JBrowse link
G Dhh desert hedgehog signaling molecule ISO (MGI:5698232|PMID:25639508) RGD PMID:25639508 MGI:5698232 NCBI chr 7:140,575,288...140,580,783
Ensembl chr 7:140,575,288...140,580,783
JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 ISO MGI:3526402 (MGI:5780798|PMID:21308776) RGD PMID:21308776 MGI:5780798 NCBI chr 6:133,576,513...133,583,751
Ensembl chr 6:133,552,821...133,583,751
JBrowse link
G Dlx5 distal-less homeobox 5 IEA
ISO
ISS
GO_REF:0000107
(MGI:3522068|PMID:15383550)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15383550 GO_REF:0000024, GO_REF:0000107, MGI:3522068 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
G Epha2 Eph receptor A2 ISO (MGI:5284751|PMID:19299512) RGD PMID:19299512 MGI:5284751 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
JBrowse link
G Fgf9 fibroblast growth factor 9 ISO MGI:2135961 (MGI:3716021|PMID:17544391) RGD PMID:17544391 MGI:3716021 NCBI chr15:38,341,657...38,386,945
Ensembl chr15:38,341,089...38,387,316
JBrowse link
G Fhl2 four and a half LIM domains 2 ISO (PMID:16311053) RGD PMID:16311053 NCBI chr 9:49,920,611...49,994,906
Ensembl chr 9:49,920,854...49,950,093
JBrowse link
G Fignl1 fidgetin-like 1 ISS
ISO
GO_REF:0000024
(MGI:4943395|PMID:17352653)
UniProt
RGD
PMID:17352653 GO_REF:0000024, MGI:4943395 NCBI chr14:91,895,902...91,904,474
Ensembl chr14:91,895,909...91,904,433
JBrowse link
G Gabbr1 gamma-aminobutyric acid type B receptor subunit 1 IMP RGD PMID:12054677 RGD:625463 NCBI chr20:1,955,344...1,984,907
Ensembl chr20:1,955,359...1,984,863
JBrowse link
G Gdf10 growth differentiation factor 10 IEP
IEA
GO_REF:0000002 InterPro PMID:15994055 GO_REF:0000002, RGD:2316368 NCBI chr16:10,250,508...10,262,383
Ensembl chr16:10,250,404...10,263,150
JBrowse link
G Gdf2 growth differentiation factor 2 ISO MGI:1341800|MGI:96396|MGI:96397|MGI:96398 (MGI:3050935|PMID:15161906), (MGI:3836510|PMID:18986983) RGD PMID:15161906, PMID:18986983 MGI:3050935, MGI:3836510 NCBI chr16:10,267,510...10,293,545
Ensembl chr16:10,267,482...10,273,239
JBrowse link
G Gja1 gap junction protein, alpha 1 ISO MGI:1857177|MGI:2445468|MGI:3776013 (MGI:2656409|PMID:12606326), (MGI:5311551|PMID:21934140) RGD PMID:12606326, PMID:21934140 MGI:2656409, MGI:5311551 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gli1 GLI family zinc finger 1 ISO (PMID:12165851) RGD PMID:12165851 NCBI chr 7:70,620,794...70,633,171
Ensembl chr 7:70,620,766...70,630,338
JBrowse link
G Gli2 GLI family zinc finger 2 ISO (PMID:12165851)
MGI:1915509 (MGI:5431249|PMID:22771375)
RGD PMID:12165851, PMID:22771375 MGI:5431249 NCBI chr13:34,829,021...35,049,172
Ensembl chr13:34,829,139...35,048,444
JBrowse link
G Glis1 GLIS family zinc finger 1 ISO (MGI:6294234|PMID:30544251) RGD PMID:30544251 MGI:6294234 NCBI chr 5:127,043,344...127,233,395
Ensembl chr 5:127,160,495...127,233,078
JBrowse link
G Gpnmb glycoprotein nmb IEP RGD PMID:11746512 RGD:632991 NCBI chr 4:78,694,447...78,715,685
Ensembl chr 4:78,694,447...78,715,683
JBrowse link
G H3f3a H3.3 histone A ISO MGI:1101768|MGI:1913653|MGI:99430 (MGI:5430686|PMID:22705305) RGD PMID:22705305 MGI:5430686 NCBI chr13:99,091,246...99,102,828
Ensembl chr13:99,091,763...99,101,208
JBrowse link
G H3f3b H3.3 histone B ISO MGI:1097686|MGI:1913653|MGI:99430 (MGI:5430686|PMID:22705305) RGD PMID:22705305 MGI:5430686 NCBI chr10:104,573,666...104,575,890
Ensembl chr10:104,573,664...104,575,890
JBrowse link
G Hira histone cell cycle regulator ISO MGI:1097686|MGI:1101768|MGI:3650546 (MGI:5430686|PMID:22705305) RGD PMID:22705305 MGI:5430686 NCBI chr11:86,168,196...86,276,430
Ensembl chr11:86,168,196...86,276,430
JBrowse link
G Id4 inhibitor of DNA binding 4, HLH protein ISO (MGI:4818501|PMID:20628571) RGD PMID:20628571 MGI:4818501 NCBI chr17:16,692,557...16,695,126
Ensembl chr17:16,692,557...16,695,126
JBrowse link
G Ift80 intraflagellar transport 80 ISO MGI:3689350|MGI:5818514|MGI:95728 (MGI:5431249|PMID:22771375), (MGI:5807019|PMID:26996322) RGD PMID:22771375, PMID:26996322 MGI:5431249, MGI:5807019 NCBI chr 2:165,506,878...165,600,748
Ensembl chr 2:165,505,810...165,600,748
JBrowse link
G Igf1 insulin-like growth factor 1 ISO (PMID:16311053) RGD PMID:16311053 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Igf2 insulin-like growth factor 2 ISO
IEA
(PMID:16311053)
GO_REF:0000107
RGD
Ensembl
PMID:16311053 GO_REF:0000107 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 ISO
IEA
(PMID:16311053)
GO_REF:0000107
RGD
Ensembl
PMID:16311053 GO_REF:0000107 NCBI chr14:87,457,647...87,465,374
Ensembl chr14:87,457,647...87,465,374
JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 ISO (PMID:16311053) RGD PMID:16311053 NCBI chr 9:80,154,230...80,166,813
Ensembl chr 9:80,150,211...80,167,033
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO MGI:1928765|MGI:1934258 (MGI:3036410|PMID:14973297), (MGI:5698232|PMID:25639508) RGD PMID:14973297, PMID:25639508 MGI:3036410, MGI:5698232 NCBI chr 9:82,208,223...82,214,440
Ensembl chr 9:82,208,223...82,214,440
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:18165223 RGD:4889468 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit IEA
ISO
GO_REF:0000107
MGI:2176174|MGI:3036209 (MGI:3029146|PMID:14769860)
Ensembl
RGD
PMID:14769860 GO_REF:0000107, MGI:3029146 NCBI chr19:26,092,972...26,094,756
Ensembl chr19:26,092,974...26,094,756
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 IEA
ISO
GO_REF:0000107
(PMID:20128911)
Ensembl
RGD
PMID:20128911 GO_REF:0000107 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 ISS
ISO
GO_REF:0000024
(MGI:4360132|PMID:19605502)
UniProt
RGD
PMID:19605502 GO_REF:0000024, MGI:4360132 NCBI chr 3:101,051,960...101,152,119
Ensembl chr 3:101,051,955...101,152,119
JBrowse link
G Lox lysyl oxidase ISO MGI:3610732 (MGI:5603515|PMID:19458888) RGD PMID:19458888 MGI:5603515 NCBI chr18:47,500,320...47,577,819
Ensembl chr18:47,500,330...47,577,819
JBrowse link
G Lrrc17 leucine rich repeat containing 17 NOT ISO (MGI:3850892|PMID:19336404) RGD PMID:19336404 MGI:3850892 NCBI chr 4:10,108,184...10,138,652
Ensembl chr 4:10,108,192...10,138,652
JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISO
GO_REF:0000107
MGI:99533 (MGI:3701381|PMID:17336904), (PMID:21652706)
Ensembl
RGD
PMID:17336904, PMID:21652706 GO_REF:0000107, MGI:3701381 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mef2d myocyte enhancer factor 2D IEA
ISO
GO_REF:0000107
MGI:99458 (MGI:3701381|PMID:17336904)
Ensembl
RGD
PMID:17336904 GO_REF:0000107, MGI:3701381 NCBI chr 2:187,511,775...187,541,285
Ensembl chr 2:187,512,164...187,538,026
JBrowse link
G Mmp13 matrix metallopeptidase 13 IEP RGD PMID:10528234 RGD:10043160 NCBI chr 8:5,522,739...5,533,018
Ensembl chr 8:5,522,739...5,533,018
JBrowse link
G Msx2 msh homeobox 2 ISS
ISO
GO_REF:0000024
(MGI:3522068|PMID:15383550)
UniProt
RGD
PMID:15383550 GO_REF:0000024, MGI:3522068 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Myoc myocilin IEA
ISO
ISS
GO_REF:0000107
(MGI:5503270|PMID:23629661)
GO_REF:0000024
(PMID:23629661)
Ensembl
RGD
UniProt
PMID:23629661 GO_REF:0000024, GO_REF:0000107, MGI:5503270 NCBI chr13:80,517,531...80,527,928
Ensembl chr13:80,517,536...80,527,928
JBrowse link
G Nf1 neurofibromin 1 IEA
ISO
ISS
GO_REF:0000107
MGI:1857478 (MGI:3690406|PMID:16893911)
GO_REF:0000024
Ensembl
RGD
HGNC
PMID:16893911 GO_REF:0000024, GO_REF:0000107, MGI:3690406 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Nog noggin IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:3810620|PMID:10780858)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10780858, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:3810620, RGD:13792537 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Nr1i3 nuclear receptor subfamily 1, group I, member 3 IEP RGD PMID:19702932 RGD:9835391 NCBI chr13:89,585,072...89,591,278
Ensembl chr13:89,586,283...89,591,277
JBrowse link
G Pcp4 Purkinje cell protein 4 IEP RGD PMID:18008138 RGD:9850248 NCBI chr11:36,851,035...36,912,272
Ensembl chr11:36,851,038...36,912,229
JBrowse link
G Penk proenkephalin IEP RGD PMID:8584038 RGD:10003035 NCBI chr 5:17,056,412...17,061,762
Ensembl chr 5:17,056,419...17,061,837
JBrowse link
G Rack1 receptor for activated C kinase 1 HDA PMID:16210410 UniProt PMID:16210410 RGD:8655526 NCBI chr10:34,149,717...34,155,198
Ensembl chr10:34,149,717...34,155,198
Ensembl chr12:34,149,717...34,155,198
JBrowse link
G Rps11 ribosomal protein S11 HDA PMID:16210410 UniProt PMID:16210410 RGD:8655526 NCBI chr 1:101,116,641...101,118,749
Ensembl chr 1:101,116,635...101,118,825
JBrowse link
G Rspo2 R-spondin 2 ISO MGI:88177 (MGI:3850932|PMID:19213727) RGD PMID:19213727 MGI:3850932 NCBI chr 7:81,919,911...82,059,659
Ensembl chr 7:81,924,050...82,059,789
JBrowse link
G Runx2 RUNX family transcription factor 2 IMP
ISO
MGI:1917649|MGI:2183833|MGI:88177 (MGI:3528197|PMID:15389629), (MGI:3528208|PMID:15565649), (MGI:3587162|PMID:16099986)
(PMID:20128911)
RGD PMID:15389629, PMID:15565649, PMID:16099986, PMID:20128911, PMID:19940863 MGI:3528197, MGI:3528208, MGI:3587162, RGD:12880052 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IEP
ISO
IEA
PMID:16149051
(PMID:16149051)
GO_REF:0000107
RGD
Ensembl
PMID:16149051, PMID:16149051 GO_REF:0000107, RGD:4107087 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Shox2 short stature homeobox 2 ISO MGI:3626291 (MGI:3805084|PMID:18514492) RGD PMID:18514492 MGI:3805084 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
G Sirt7 sirtuin 7 ISS
ISO
GO_REF:0000024
(MGI:6209006|PMID:30026585)
UniProt
RGD
PMID:30026585 GO_REF:0000024, MGI:6209006 NCBI chr10:109,796,046...109,802,821
Ensembl chr10:109,796,020...109,802,739
JBrowse link
G Smad3 SMAD family member 3 ISO (MGI:3654245|PMID:11585338) RGD PMID:11585338 MGI:3654245 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Smad4 SMAD family member 4 IMP RGD PMID:19940863 RGD:12880052 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Smo smoothened, frizzled class receptor IEP
ISO
IEA
MGI:2176256 (MGI:3036410|PMID:14973297)
GO_REF:0000107
RGD
Ensembl
PMID:14973297, PMID:19649528 GO_REF:0000107, MGI:3036410, RGD:2324984 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770
JBrowse link
G Snai1 snail family transcriptional repressor 1 ISO (PMID:20128911) RGD PMID:20128911 NCBI chr 3:164,274,710...164,279,199
Ensembl chr 3:164,274,710...164,279,378
JBrowse link
G Snai2 snail family transcriptional repressor 2 ISO (PMID:20128911) RGD PMID:20128911 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (PMID:18187129) RGD PMID:18187129 NCBI chr 2:121,165,137...121,167,545
Ensembl chr 2:121,165,137...121,167,545
JBrowse link
G Sox8 SRY-box transcription factor 8 ISS
ISO
GO_REF:0000024
MGI:2154329 (MGI:3577129|PMID:15753123)
UniProt
RGD
PMID:15753123 GO_REF:0000024, MGI:3577129 NCBI chr10:14,932,348...14,937,336
Ensembl chr10:14,932,348...14,937,336
JBrowse link
G Sp7 Sp7 transcription factor ISO (PMID:18932205)
MGI:2159411 (MGI:2158114|PMID:11792318)
RGD PMID:11792318, PMID:18932205 MGI:2158114 NCBI chr 7:143,957,316...143,967,488
Ensembl chr 7:143,958,858...143,967,484
JBrowse link
G Spp1 secreted phosphoprotein 1 IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:15598896, PMID:21873635 RGD:1581126, RGD:13792537 NCBI chr14:6,673,686...6,679,965
Ensembl chr14:6,673,686...6,679,901
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO (MGI:5617089|PMID:25382630) RGD PMID:25382630 MGI:5617089 NCBI chr14:3,506,416...3,680,508
Ensembl chr14:3,506,339...3,682,545
JBrowse link
G Tmem119 transmembrane protein 119 ISO (MGI:4946996|PMID:21239498) RGD PMID:21239498 MGI:4946996 NCBI chr12:48,598,498...48,605,704
Ensembl chr12:48,598,647...48,605,704
JBrowse link
G Tmsb4x thymosin beta 4, X-linked IEP RGD PMID:2325669 RGD:729958 NCBI chr  X:28,593,405...28,617,267
Ensembl chr  X:28,593,405...28,595,395
JBrowse link
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 IEA
ISO
GO_REF:0000107
(MGI:5314685|PMID:21467300)
Ensembl
RGD
PMID:21467300 GO_REF:0000107, MGI:5314685 NCBI chr 3:150,910,398...150,918,525
Ensembl chr 3:150,910,398...150,918,525
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO MGI:1857265|MGI:3038818 (MGI:3042355|PMID:15030764) RGD PMID:15030764 MGI:3042355 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Twist2 twist family bHLH transcription factor 2 ISO MGI:3044412 (MGI:3042355|PMID:15030764) RGD PMID:15030764 MGI:3042355 NCBI chr 9:98,924,134...98,968,510
Ensembl chr 9:98,924,134...98,968,510
JBrowse link
G Wnt11 Wnt family member 11 ISO MGI:1922667|MGI:88177 (MGI:3850932|PMID:19213727) RGD PMID:19213727 MGI:3850932 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Wnt3a Wnt family member 3A ISO MGI:88613 (MGI:3620470|PMID:16581771) RGD PMID:16581771 MGI:3620470 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
G Wwox WW domain-containing oxidoreductase ISO MGI:3704944 (MGI:3804353|PMID:18487609) RGD PMID:18487609 MGI:3804353 NCBI chr19:46,761,353...47,695,247 JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 ISO MGI:88177 (MGI:3587162|PMID:16099986) RGD PMID:16099986 MGI:3587162 NCBI chr 2:147,577,149...147,693,033
Ensembl chr 2:147,577,089...147,693,082
JBrowse link
osteoblast fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Men1 menin 1 ISO MGI:109452|MGI:1328787|MGI:99829 (MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:3056877 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Runx2 RUNX family transcription factor 2 IEA
ISO
GO_REF:0000107
MGI:1316736 (MGI:3056877|PMID:15150273)
Ensembl
RGD
PMID:15150273 GO_REF:0000107, MGI:3056877 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B ISO (MGI:5800302|PMID:27711054) RGD PMID:27711054 MGI:5800302 NCBI chr10:17,209,152...17,296,449
Ensembl chr10:17,209,212...17,291,876
JBrowse link
G Smad1 SMAD family member 1 IEA
ISO
GO_REF:0000107
MGI:1316736 (MGI:3056877|PMID:15150273)
Ensembl
RGD
PMID:15150273 GO_REF:0000107, MGI:3056877 NCBI chr19:32,182,942...32,248,694
Ensembl chr19:32,188,267...32,248,684
JBrowse link
G Smad5 SMAD family member 5 ISO MGI:1316736 (MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:3056877 NCBI chr17:8,307,448...8,336,996
Ensembl chr17:8,311,796...8,331,032
JBrowse link
positive regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO
IEA
(PMID:18436533)
GO_REF:0000107
RGD
Ensembl
PMID:18436533 GO_REF:0000107 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G Acvr2a activin A receptor type 2A ISO
IEA
(PMID:18436533)
GO_REF:0000107
RGD
Ensembl
PMID:18436533 GO_REF:0000107 NCBI chr 3:32,947,901...33,034,598
Ensembl chr 3:32,947,378...33,034,282
JBrowse link
G Acvr2b activin A receptor type 2B ISO
IEA
(PMID:18436533)
GO_REF:0000107
RGD
Ensembl
PMID:18436533 GO_REF:0000107 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 ISO (MGI:6211994|PMID:22419726) RGD PMID:22419726 MGI:6211994 NCBI chr 2:8,926,843...9,504,455
Ensembl chr 2:8,926,850...9,504,134
JBrowse link
G Adrb2 adrenoceptor beta 2 IEA
ISO
GO_REF:0000107
MGI:1859675 (MGI:3575849|PMID:15724149)
Ensembl
RGD
PMID:15724149 GO_REF:0000107, MGI:3575849 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Alox5 arachidonate 5-lipoxygenase ISS
ISO
IEA
GO_REF:0000024
(MGI:6393219|PMID:24906289)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24906289 GO_REF:0000024, GO_REF:0000107, MGI:6393219 NCBI chr 4:148,398,004...148,446,308
Ensembl chr 4:148,398,892...148,446,303
JBrowse link
G Ano6 anoctamin 6 ISO (PMID:25589784)
(MGI:5634871|PMID:25589784)
RGD PMID:25589784 MGI:5634871 NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ISS
ISO
GO_REF:0000024
(MGI:5780494|PMID:26392310)
UniProt
RGD
PMID:26392310 GO_REF:0000024, MGI:5780494 NCBI chr 7:41,114,606...41,223,138
Ensembl chr 7:41,114,697...41,220,579
JBrowse link
G Atraid all-trans retinoic acid-induced differentiation factor ISO (PMID:21723284) RGD PMID:21723284 NCBI chr 6:26,680,628...26,685,185
Ensembl chr 6:26,680,598...26,685,235
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISS
ISO
GO_REF:0000024
(MGI:5009350|PMID:20675382)
(PMID:18436533), (PMID:20576608)
UniProt
RGD
PMID:18436533, PMID:20576608, PMID:20675382 GO_REF:0000024, MGI:5009350 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Bmp4 bone morphogenetic protein 4 IDA
ISO
ISS
IEA
(PMID:14749725), (PMID:18436533)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:14749725, PMID:18436533, PMID:15352071 GO_REF:0000024, GO_REF:0000107, RGD:9068399 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO (PMID:18436533) RGD PMID:18436533 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO (PMID:18436533) RGD PMID:18436533 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 2:247,392,195...247,662,026
Ensembl chr 2:247,403,920...247,446,882
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Ccn1 cellular communication network factor 1 IEA
ISO
GO_REF:0000107
(PMID:20675382)
Ensembl
RGD
PMID:20675382 GO_REF:0000107 NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
JBrowse link
G Cd276 Cd276 molecule ISO MGI:3033707 (MGI:3052626|PMID:15317945) RGD PMID:15317945 MGI:3052626 NCBI chr 8:63,312,060...63,350,411
Ensembl chr 8:63,318,019...63,350,269
JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase ISO (MGI:3715055|PMID:17369251), (MGI:5427766|PMID:22615579) RGD PMID:17369251, PMID:22615579 MGI:3715055, MGI:5427766 NCBI chr12:17,913,771...17,972,733
Ensembl chr12:17,913,767...17,972,737
JBrowse link
G Fbn2 fibrillin 2 ISO (MGI:4836762|PMID:20855508) RGD PMID:20855508 MGI:4836762 NCBI chr18:53,068,495...53,272,254
Ensembl chr18:53,068,495...53,181,503
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO MGI:2135670 (MGI:4437389|PMID:20053668) RGD PMID:20053668 MGI:4437389 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Fzd9 frizzled class receptor 9 ISS
ISO
GO_REF:0000024
(MGI:4943600|PMID:21402791)
UniProt
RGD
PMID:21402791 GO_REF:0000024, MGI:4943600 NCBI chr12:24,473,981...24,476,295
Ensembl chr12:24,473,981...24,476,295
JBrowse link
G Gpm6b glycoprotein m6b IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21638316)
Ensembl
UniProt
RGD
PMID:21638316 GO_REF:0000024, GO_REF:0000107 NCBI chr  X:29,604,607...29,751,174
Ensembl chr  X:29,607,075...29,648,403
JBrowse link
G Isg15 ISG15 ubiquitin-like modifier ISO (MGI:4943600|PMID:21402791) RGD PMID:21402791 MGI:4943600 NCBI chr 5:173,624,862...173,629,124
Ensembl chr 5:173,624,310...173,626,248
JBrowse link
G Kl Klotho IEA
ISO
GO_REF:0000107
(PMID:12110410)
Ensembl
RGD
PMID:12110410 GO_REF:0000107 NCBI chr12:942,974...987,206
Ensembl chr12:943,006...987,551
JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISO
ISS
GO_REF:0000107
(MGI:5285459|PMID:21652706)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21652706 GO_REF:0000024, GO_REF:0000107, MGI:5285459 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 ISO MGI:5007248 (MGI:5008683|PMID:21606205) RGD PMID:21606205 MGI:5008683 NCBI chr13:101,727,434...101,770,127
Ensembl chr13:101,727,935...101,761,541
JBrowse link
G Nell1 neural EGFL like 1 ISO
ISS
(PMID:21723284)
GO_REF:0000024
RGD
UniProt
PMID:21723284 GO_REF:0000024 NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958
JBrowse link
G Osr1 odd-skipped related transcription factor 1 ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO MGI:2386080 (MGI:2667237|PMID:12677010), (MGI:3797675|PMID:18519738) RGD PMID:12677010, PMID:18519738 MGI:2667237, MGI:3797675 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic ISO (MGI:3813934|PMID:19097194) RGD PMID:19097194 MGI:3813934 NCBI chr 6:6,427,657...6,436,974
Ensembl chr 6:6,427,657...6,436,974
JBrowse link
G Pla2g4a phospholipase A2 group IVA IEP RGD PMID:10807497 RGD:1642474 NCBI chr13:67,062,252...67,206,688
Ensembl chr13:66,988,937...67,206,693
JBrowse link
G Pth parathyroid hormone IDA
ISO
(PMID:17696759) RGD PMID:17696759, PMID:15758479, PMID:22445539 RGD:7207452, RGD:7242906 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Ptn pleiotrophin ISS
ISO
GO_REF:0000024
(MGI:6294181|PMID:19442624)
UniProt
RGD
PMID:19442624 GO_REF:0000024, MGI:6294181 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO (PMID:25589784) RGD PMID:25589784 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Smad3 SMAD family member 3 IDA rat gene expressed in mouse osteoblastic cell line MC3T3-E1; TGF-beta down-regulates this activity RGD PMID:12096832 RGD:727387 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO
IEA
ISS
(PMID:19578371)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19578371 GO_REF:0000024, GO_REF:0000107 NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO
ISS
(PMID:17401695)
GO_REF:0000024
RGD
AgBase
PMID:17401695 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgfb3 transforming growth factor, beta 3 ISO
ISS
(PMID:17401695)
GO_REF:0000024
RGD
AgBase
PMID:17401695 GO_REF:0000024 NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
JBrowse link
G Tmem119 transmembrane protein 119 ISO
IBA
(PMID:20025746)
(MGI:4418582|PMID:20025746), (MGI:5700277|PMID:26207632)
PMID:21873635
RGD PMID:20025746, PMID:26207632, PMID:21873635 MGI:4418582, MGI:5700277, RGD:13792537 NCBI chr12:48,598,498...48,605,704
Ensembl chr12:48,598,647...48,605,704
JBrowse link
G Wnt10b Wnt family member 10B ISO (MGI:3574150|PMID:15728361) RGD PMID:15728361 MGI:3574150 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
G Wnt4 Wnt family member 4 ISO
IEA
(PMID:17720811)
GO_REF:0000107
RGD
Ensembl
PMID:17720811 GO_REF:0000107 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
positive regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:5291888|PMID:21784188) RGD PMID:21784188 MGI:5291888 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Asxl2 ASXL transcriptional regulator 2 ISO MGI:3840841 (MGI:5514358|PMID:21490954) RGD PMID:21490954 MGI:5514358 NCBI chr 6:27,835,346...27,919,285
Ensembl chr 6:27,887,797...27,915,563
JBrowse link
positive regulation of ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 ISO (PMID:9213002)
(MGI:3575204|PMID:15820682), (MGI:4948784|PMID:21324897)
RGD PMID:9213002, PMID:15820682, PMID:21324897 MGI:3575204, MGI:4948784 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Bmp4 bone morphogenetic protein 4 IMP
ISO
IDA
(MGI:63654|PMID:8358941)
PMID:7911662
(PMID:14749725)
RGD PMID:8358941, PMID:14749725, PMID:17112416, PMID:7911662 MGI:63654, RGD:1643600, RGD:632977 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (MGI:2429424|PMID:12441304) RGD PMID:12441304 MGI:2429424 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Calca calcitonin-related polypeptide alpha ISO MGI:2148538 (MGI:3653805|PMID:15537449) RGD PMID:15537449 MGI:3653805 NCBI chr 1:184,184,018...184,188,922
Ensembl chr 1:184,184,020...184,188,911
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO MGI:2673982 (MGI:3055483|PMID:15469977) RGD PMID:15469977 MGI:3055483 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Nell1 neural EGFL like 1 IMP RGD PMID:19493425 RGD:2314454 NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958
JBrowse link
G Nipbl NIPBL, cohesin loading factor ISO MGI:4332250 (MGI:4367301|PMID:19763162) RGD PMID:19763162 MGI:4367301 NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:18257653 RGD:2304114 NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO MGI:2386080 (MGI:3616954|PMID:16269410), (MGI:3797675|PMID:18519738) RGD PMID:16269410, PMID:18519738 MGI:3616954, MGI:3797675 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:14751573, PMID:17106877 RGD:10043372, RGD:10045950 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Pth parathyroid hormone IDA RGD PMID:15758479 RGD:7207452 NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
JBrowse link
G Ptn pleiotrophin IMP PMID:9817766 UniProt PMID:9817766 RGD:14397563 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 ISS
ISO
GO_REF:0000024
(MGI:6414736|PMID:29644115)
UniProt
RGD
PMID:29644115 GO_REF:0000024, MGI:6414736 NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
JBrowse link
G Runx2 RUNX family transcription factor 2 IMP RGD PMID:11784711 RGD:1601657 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Scube2 signal peptide, CUB domain and EGF like domain containing 2 ISO MGI:5698367 (MGI:5698232|PMID:25639508) RGD PMID:25639508 MGI:5698232 NCBI chr 1:174,428,056...174,495,356
Ensembl chr 1:174,428,699...174,495,258
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO
ISS
(PMID:20626275)
(MGI:3052265|PMID:15254231)
GO_REF:0000024
RGD
UniProt
PMID:15254231, PMID:20626275 GO_REF:0000024, MGI:3052265 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Tac1 tachykinin, precursor 1 IDA RGD PMID:17204323 RGD:2304342 NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819
JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:17204323 RGD:2304342 NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504
JBrowse link
G Tgfb2 transforming growth factor, beta 2 ISO
ISS
(PMID:17401695)
GO_REF:0000024
RGD
AgBase
PMID:17401695 GO_REF:0000024 NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
JBrowse link
G Thrb thyroid hormone receptor beta IDA RGD PMID:15647824 RGD:1601663 NCBI chr15:8,890,578...9,239,815
Ensembl chr15:8,890,578...9,086,282
JBrowse link
G Tob2 transducer of ERBB2, 2 ISO MGI:3789484 (MGI:3785228|PMID:18358842) RGD PMID:18358842 MGI:3785228 NCBI chr 7:123,079,520...123,088,240
Ensembl chr 7:123,079,537...123,088,279
JBrowse link
G Wnt10b Wnt family member 10B ISO MGI:3582610|MGI:98578 (MGI:3574150|PMID:15728361), (MGI:3829542|PMID:17708715), (MGI:4358631|PMID:19723499) RGD PMID:15728361, PMID:17708715, PMID:19723499 MGI:3574150, MGI:3829542, MGI:4358631 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA
(PMID:20032469)
GO_REF:0000107
RGD
Ensembl
PMID:20032469 GO_REF:0000107 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 ISO
ISS
(PMID:21547890)
GO_REF:0000024
RGD
UniProt
PMID:21547890 GO_REF:0000024 NCBI chr 8:52,980,226...53,146,765
Ensembl chr 8:52,985,313...53,146,953
JBrowse link
positive regulation of osteoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO
IEA
(PMID:18436533)
GO_REF:0000107
RGD
Ensembl
PMID:18436533 GO_REF:0000107 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G Acvr2a activin A receptor type 2A ISO
IEA
(PMID:18436533)
GO_REF:0000107
RGD
Ensembl
PMID:18436533 GO_REF:0000107 NCBI chr 3:32,947,901...33,034,598
Ensembl chr 3:32,947,378...33,034,282
JBrowse link
G Acvr2b activin A receptor type 2B ISO
IEA
(PMID:18436533)
GO_REF:0000107
RGD
Ensembl
PMID:18436533 GO_REF:0000107 NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
JBrowse link
G Atp6ap1 ATPase H+ transporting accessory protein 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:5575464|PMID:22467241)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22467241 GO_REF:0000024, GO_REF:0000107, MGI:5575464 NCBI chr  X:156,407,973...156,415,053
Ensembl chr  X:156,407,937...156,415,145
JBrowse link
G Atraid all-trans retinoic acid-induced differentiation factor ISO (PMID:21723284) RGD PMID:21723284 NCBI chr 6:26,680,628...26,685,185
Ensembl chr 6:26,680,598...26,685,235
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISS
ISO
GO_REF:0000024
(MGI:3050916|PMID:15175325), (MGI:3587162|PMID:16099986), (MGI:5009350|PMID:20675382)
(PMID:15254224), (PMID:16433617), (PMID:18436533), (PMID:20576608)
UniProt
RGD
PMID:15175325, PMID:15254224, PMID:16099986, PMID:16433617, PMID:18436533, PMID:20576608, PMID:20675382 GO_REF:0000024, MGI:3050916, MGI:3587162, MGI:5009350 NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
JBrowse link
G Bmp4 bone morphogenetic protein 4 IMP
ISO
ISS
IEA
IDA
(PMID:14749725), (PMID:18436533)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:14749725, PMID:18436533, PMID:17112416, PMID:16245174 GO_REF:0000024, GO_REF:0000107, RGD:1643600, RGD:2289011 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp6 bone morphogenetic protein 6 IMP
ISO
(PMID:18436533) RGD PMID:18436533, PMID:9202223 RGD:2289027 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO (PMID:18436533) RGD PMID:18436533 NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 2:247,392,195...247,662,026
Ensembl chr 2:247,403,920...247,446,882
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Ccn1 cellular communication network factor 1 ISO
IEA
(PMID:20675382)
GO_REF:0000107
RGD
Ensembl
PMID:20675382 GO_REF:0000107 NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
JBrowse link
G Ccn4 cellular communication network factor 4 IEA
ISO
GO_REF:0000107
(PMID:20684029)
Ensembl
RGD
PMID:20684029 GO_REF:0000107 NCBI chr 7:107,695,227...107,723,759
Ensembl chr 7:107,695,215...107,723,772
JBrowse link
G Cd276 Cd276 molecule ISO MGI:3033707 (MGI:3052626|PMID:15317945) RGD PMID:15317945 MGI:3052626 NCBI chr 8:63,312,060...63,350,411
Ensembl chr 8:63,318,019...63,350,269
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha IEA
ISO
GO_REF:0000107
(MGI:3050916|PMID:15175325)
Ensembl
RGD
PMID:15175325 GO_REF:0000107, MGI:3050916 NCBI chr 1:91,363,492...91,366,164
Ensembl chr 1:91,363,492...91,366,164
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta ISO (MGI:3050916|PMID:15175325) RGD PMID:15175325 MGI:3050916 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta ISO (MGI:3050916|PMID:15175325) RGD PMID:15175325 MGI:3050916 NCBI chr11:89,008,008...89,009,146
Ensembl chr11:89,008,008...89,009,146
JBrowse link
G Clic1 chloride intracellular channel 1 ISO (MGI:4410403|PMID:19703605) RGD PMID:19703605 MGI:4410403 NCBI chr20:5,040,314...5,049,166
Ensembl chr20:5,040,337...5,049,166
JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 ISO MGI:3830252 (MGI:3829514|PMID:18779865) RGD PMID:18779865 MGI:3829514 NCBI chr 7:77,966,722...77,977,004
Ensembl chr 7:77,966,722...77,977,004
JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
MGI:2148591|MGI:2148594|MGI:2450929 (MGI:3578464|PMID:15866163)
Ensembl
RGD
PMID:15866163 GO_REF:0000107, MGI:3578464 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 ISO (PMID:18977368) RGD PMID:18977368 NCBI chr 5:166,464,170...166,513,030
Ensembl chr 5:166,464,252...166,513,027
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO (PMID:20564243) RGD PMID:20564243 NCBI chr13:88,311,639...88,436,561
Ensembl chr13:88,317,145...88,436,789
JBrowse link
G Dlx5 distal-less homeobox 5 IMP RGD PMID:12815054 RGD:1298882 NCBI chr 4:32,387,741...32,392,085
Ensembl chr 4:32,387,741...32,392,007
JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 IEA
ISO
GO_REF:0000107
(MGI:6450489|PMID:25498833)
Ensembl
RGD
PMID:25498833 GO_REF:0000107, MGI:6450489 NCBI chr 2:251,912,432...251,970,699
Ensembl chr 2:251,912,368...251,970,768
JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase ISO (MGI:5427766|PMID:22615579) RGD PMID:22615579 MGI:5427766 NCBI chr12:17,913,771...17,972,733
Ensembl chr12:17,913,767...17,972,737
JBrowse link
G Fbn2 fibrillin 2 ISO (MGI:4836762|PMID:20855508) RGD PMID:20855508 MGI:4836762 NCBI chr18:53,068,495...53,272,254
Ensembl chr18:53,068,495...53,181,503
JBrowse link
G Fbxo5 F-box protein 5 ISO (PMID:29850565) RGD PMID:29850565 NCBI chr 1:42,461,277...42,467,646
Ensembl chr 1:42,461,291...42,467,586
JBrowse link
G Fermt2 fermitin family member 2 ISO (PMID:29496737)
(MGI:6149626|PMID:29496737)
RGD PMID:29496737 MGI:6149626 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Ffar4 free fatty acid receptor 4 ISS
ISO
GO_REF:0000024
(MGI:6220333|PMID:26365922)
UniProt
RGD
PMID:26365922 GO_REF:0000024, MGI:6220333 NCBI chr 1:256,786,124...256,804,156
Ensembl chr 1:256,786,124...256,804,156
JBrowse link
G Fgf2 fibroblast growth factor 2 ISO MGI:95729 (MGI:4821204|PMID:20570969) RGD PMID:20570969 MGI:4821204 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Gdf10 growth differentiation factor 10 IDA RGD PMID:12559390 RGD:2316372 NCBI chr16:10,250,508...10,262,383
Ensembl chr16:10,250,404...10,263,150
JBrowse link
G Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 ISO (MGI:2679742|PMID:12933806) RGD PMID:12933806 MGI:2679742 NCBI chr  X:70,563,381...70,572,295
Ensembl chr  X:70,563,570...70,572,295
JBrowse link
G Gli3 GLI family zinc finger 3 ISO MGI:1856276|MGI:95516 (MGI:4821204|PMID:20570969) RGD PMID:20570969 MGI:4821204 NCBI chr17:52,294,942...52,569,036
Ensembl chr17:52,294,942...52,569,036
JBrowse link
G Gnas GNAS complex locus ISO MGI:3043361 (MGI:3619837|PMID:15797856) RGD PMID:15797856 MGI:3619837 NCBI chr 3:172,374,957...172,434,988
Ensembl chr 3:172,374,957...172,428,483
Ensembl chr 3:172,374,957...172,428,483
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISO MGI:1321394|MGI:99829 (MGI:3836510|PMID:18986983) RGD PMID:18986983 MGI:3836510 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Igf1 insulin-like growth factor 1 IDA
IEA
ISO
GO_REF:0000107
(PMID:16433617)
Ensembl
RGD
PMID:16433617, PMID:16897348 GO_REF:0000107, RGD:1598452 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Il6 interleukin 6 ISO (PMID:30545407) RGD PMID:30545407 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Il6st interleukin 6 signal transducer ISO
IEA
(PMID:12372336)
GO_REF:0000107
RGD
Ensembl
PMID:12372336 GO_REF:0000107 NCBI chr 2:44,279,199...44,319,427
Ensembl chr 2:44,289,393...44,314,944
JBrowse link
G Ilk integrin-linked kinase ISO (MGI:5009350|PMID:20675382) RGD PMID:20675382 MGI:5009350 NCBI chr 1:170,578,941...170,585,192
Ensembl chr 1:170,578,889...170,585,189
JBrowse link
G Jag1 jagged canonical Notch ligand 1 IEA
ISO
GO_REF:0000107
(MGI:5522615|PMID:23980096)
Ensembl
RGD
PMID:23980096 GO_REF:0000107, MGI:5522615 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit ISO MGI:1316736 (MGI:3573815|PMID:15563473) RGD PMID:15563473 MGI:3573815 NCBI chr16:20,485,028...20,486,707
Ensembl chr16:20,485,029...20,486,707
JBrowse link
G Lmna lamin A/C IMP RGD PMID:22119912 RGD:10003161 NCBI chr 2:187,842,884...187,863,552
Ensembl chr 2:187,842,885...187,863,516
JBrowse link
G Lrp3 LDL receptor related protein 3 ISO (PMID:28340487) RGD PMID:28340487 NCBI chr 1:91,447,308...91,462,603
Ensembl chr 1:91,448,361...91,462,603
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO (MGI:6162346|PMID:26891291) RGD PMID:26891291 MGI:6162346 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Ltf lactotransferrin ISO (PMID:15166119) RGD PMID:15166119 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Mef2c myocyte enhancer factor 2C IEA
ISO
ISS
GO_REF:0000107
(MGI:5285459|PMID:21652706)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21652706 GO_REF:0000024, GO_REF:0000107, MGI:5285459 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Men1 menin 1 ISO MGI:88177 (MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:3056877 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Mir210 microRNA 210 ISO (MGI:3851892|PMID:19520079) RGD PMID:19520079 MGI:3851892 NCBI chr 1:214,208,355...214,208,464 JBrowse link
G Mnda myeloid cell nuclear differentiation antigen ISO MGI:88177 (MGI:3530710|PMID:15557274) RGD PMID:15557274 MGI:3530710 NCBI chr13:92,073,664...92,091,335
Ensembl chr13:92,073,668...92,089,980
JBrowse link
G Msx2 msh homeobox 2 IEA
ISO
GO_REF:0000107
(MGI:3050916|PMID:15175325)
Ensembl
RGD
PMID:15175325 GO_REF:0000107, MGI:3050916 NCBI chr17:11,683,862...11,689,527
Ensembl chr17:11,683,862...11,689,527
JBrowse link
G Nell1 neural EGFL like 1 ISO
ISS
(PMID:21723284)
GO_REF:0000024
RGD
UniProt
PMID:21723284 GO_REF:0000024 NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958
JBrowse link
G Npnt nephronectin ISO (MGI:4414689|PMID:19944102), (MGI:5285024|PMID:21689636) RGD PMID:19944102, PMID:21689636 MGI:4414689, MGI:5285024 NCBI chr 2:238,001,767...238,068,886
Ensembl chr 2:238,002,990...238,068,694
JBrowse link
G Nppc natriuretic peptide C IDA RGD PMID:17562543 RGD:1642298 NCBI chr 9:93,731,436...93,735,636
Ensembl chr 9:93,731,436...93,735,636
JBrowse link
G Pdlim7 PDZ and LIM domain 7 IDA RGD PMID:9832452 RGD:632731 NCBI chr17:9,653,510...9,668,715
Ensembl chr17:9,653,561...9,668,712
JBrowse link
G Prkd1 protein kinase D1 ISS
ISO
GO_REF:0000024
(MGI:5306577|PMID:19029091)
UniProt
RGD
PMID:19029091 GO_REF:0000024, MGI:5306577 NCBI chr 6:71,035,017...71,349,531
Ensembl chr 6:71,035,332...71,349,249
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:14751573 RGD:10043372 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Runx2 RUNX family transcription factor 2 IEA
ISO
ISS
GO_REF:0000107
MGI:1316736|MGI:1341800 (MGI:3050916|PMID:15175325), (MGI:3056877|PMID:15150273), (MGI:3836510|PMID:18986983)
GO_REF:0000024
(PMID:28703881)
Ensembl
RGD
UniProt
PMID:15150273, PMID:15175325, PMID:18986983, PMID:28703881 GO_REF:0000024, GO_REF:0000107, MGI:3050916, MGI:3056877, MGI:3836510 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Scube2 signal peptide, CUB domain and EGF like domain containing 2 ISO MGI:5698367|MGI:96533 (MGI:5698232|PMID:25639508) RGD PMID:25639508 MGI:5698232 NCBI chr 1:174,428,056...174,495,356
Ensembl chr 1:174,428,699...174,495,258
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO MGI:98956 (MGI:3772759|PMID:18166153) RGD PMID:18166153 MGI:3772759 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Smad1 SMAD family member 1 IEA
ISO
GO_REF:0000107
MGI:1316736 (MGI:3056877|PMID:15150273)
Ensembl
RGD
PMID:15150273 GO_REF:0000107, MGI:3056877 NCBI chr19:32,182,942...32,248,694
Ensembl chr19:32,188,267...32,248,684
JBrowse link
G Smad5 SMAD family member 5 ISO MGI:1316736 (MGI:3056877|PMID:15150273) RGD PMID:15150273 MGI:3056877 NCBI chr17:8,307,448...8,336,996
Ensembl chr17:8,311,796...8,331,032
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO
ISS
(PMID:20626275)
GO_REF:0000024
RGD
UniProt
PMID:20626275 GO_REF:0000024 NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
JBrowse link
G Suco SUN domain containing ossification factor IEA
ISO
ISS
GO_REF:0000107
(MGI:4452525|PMID:20440000)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20440000 GO_REF:0000024, GO_REF:0000107, MGI:4452525 NCBI chr13:79,736,485...79,801,133
Ensembl chr13:79,736,482...79,801,561
JBrowse link
G Tmem119 transmembrane protein 119 ISO
IBA
(PMID:20025746)
(MGI:4418582|PMID:20025746), (MGI:5543589|PMID:22416756), (MGI:6294241|PMID:22579779)
PMID:21873635
RGD PMID:20025746, PMID:22416756, PMID:22579779, PMID:21873635 MGI:4418582, MGI:5543589, MGI:6294241, RGD:13792537 NCBI chr12:48,598,498...48,605,704
Ensembl chr12:48,598,647...48,605,704
JBrowse link
G Tp63 tumor protein p63 ISO (PMID:22521434) RGD PMID:22521434 NCBI chr11:78,234,853...78,456,559
Ensembl chr11:78,234,800...78,456,501
JBrowse link
G Vegfa vascular endothelial growth factor A ISO MGI:1931048 (MGI:5461755|PMID:22886301) RGD PMID:22886301 MGI:5461755 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Wnt10b Wnt family member 10B ISO (MGI:3574150|PMID:15728361), (MGI:4358631|PMID:19723499) RGD PMID:15728361, PMID:19723499 MGI:3574150, MGI:4358631 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
G Wnt4 Wnt family member 4 ISO
IEA
(PMID:17720811)
GO_REF:0000107
RGD
Ensembl
PMID:17720811 GO_REF:0000107 NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
JBrowse link
G Wnt7b Wnt family member 7B ISO (MGI:3511731|PMID:15576404) RGD PMID:15576404 MGI:3511731 NCBI chr 7:126,423,418...126,465,724
Ensembl chr 7:126,420,656...126,465,723
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 ISO UniProtKB:Q96AC1 (PMID:29496737) RGD PMID:29496737 NCBI chr 2:147,577,149...147,693,033
Ensembl chr 2:147,577,089...147,693,082
JBrowse link
G Yap1 Yes1 associated transcriptional regulator ISO (PMID:29496737) RGD PMID:29496737 NCBI chr 8:6,133,014...6,204,240
Ensembl chr 8:6,135,493...6,203,579
JBrowse link
G Zhx3 zinc fingers and homeoboxes 3 ISO
ISS
(PMID:21174497)
GO_REF:0000024
RGD
UniProt
PMID:21174497 GO_REF:0000024 NCBI chr 3:156,759,820...156,868,173
Ensembl chr 3:156,764,751...156,777,999
JBrowse link
regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankh ANKH inorganic pyrophosphate transport regulator TAS
ISO
ISS
IEA
MGI:1856651 (MGI:1860991|PMID:10894769), (MGI:55055|PMID:7276519)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:7276519, PMID:10894769, PMID:12861042 GO_REF:0000024, GO_REF:0000107, MGI:1860991, MGI:55055, RGD:634632 NCBI chr 2:80,131,563...80,256,948
Ensembl chr 2:80,131,563...80,256,954
JBrowse link
G Bglap bone gamma-carboxyglutamate protein IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:187,741,770...187,748,445
Ensembl chr 2:187,741,770...187,742,747
JBrowse link
G Bmp2k BMP-2 inducible kinase IBA
ISO
PMID:21873635
(MGI:2153232|PMID:11500515)
RGD PMID:11500515, PMID:21873635 MGI:2153232, RGD:13792537 NCBI chr14:14,126,086...14,226,823
Ensembl chr14:14,129,725...14,192,048
JBrowse link
G Comp cartilage oligomeric matrix protein IEA
ISO
GO_REF:0000107
(MGI:5318950|PMID:21350216)
Ensembl
RGD
PMID:21350216 GO_REF:0000107, MGI:5318950 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 ISO (PMID:9415400) RGD PMID:9415400 NCBI chr 7:70,333,150...70,340,006
Ensembl chr 7:70,335,061...70,340,005
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO (PMID:20564243) RGD PMID:20564243 NCBI chr13:88,311,639...88,436,561
Ensembl chr13:88,317,145...88,436,789
JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 TAS RGD PMID:8509401 RGD:728616 NCBI chr14:6,889,851...6,923,961
Ensembl chr14:6,889,856...6,900,733
JBrowse link
G Ecm1 extracellular matrix protein 1 IBA
ISO
PMID:21873635
(MGI:4452294|PMID:20138147)
RGD PMID:20138147, PMID:21873635 MGI:4452294, RGD:13792537 NCBI chr 2:197,855,468...197,860,973
Ensembl chr 2:197,855,460...197,860,699
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:21,748,201...21,813,205
Ensembl chr 1:21,748,261...21,813,371
JBrowse link
G Fgf23 fibroblast growth factor 23 ISO MGI:3512143 (MGI:3510566|PMID:15579309) RGD PMID:15579309 MGI:3510566 NCBI chr 4:159,622,404...159,630,082
Ensembl chr 4:159,622,404...159,630,082
JBrowse link
G Gja1 gap junction protein, alpha 1 ISO MGI:2445468|MGI:3776013 (MGI:5317265|PMID:21346198) RGD PMID:21346198 MGI:5317265 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G LOC103690116 osteomodulin IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:14,635,588...14,646,368
Ensembl chr17:14,635,184...14,637,832
Ensembl chr17:14,635,184...14,637,832
JBrowse link
G Matn1 matrilin 1 ISO MGI:2153042|MGI:3663272 (MGI:3655339|PMID:16877353) RGD PMID:16877353 MGI:3655339 NCBI chr 5:149,077,412...149,086,957
Ensembl chr 5:149,077,412...149,086,957
JBrowse link
G Mgp matrix Gla protein IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:170,856,783...170,860,105
Ensembl chr 4:170,856,751...170,860,225
JBrowse link
G Nbr1 NBR1, autophagy cargo receptor IEA
ISO
GO_REF:0000107
(MGI:4818844|PMID:20616007)
Ensembl
RGD
PMID:20616007 GO_REF:0000107, MGI:4818844 NCBI chr10:89,455,202...89,483,791
Ensembl chr10:89,459,650...89,484,080
JBrowse link
G Omd osteomodulin NAS
IEA
GO_REF:0000002 InterPro PMID:10607915 GO_REF:0000002, RGD:633418 NCBI chr17:15,476,100...15,484,324
Ensembl chr17:15,475,710...15,484,269
JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 ISS
ISO
GO_REF:0000024
(MGI:3839226|PMID:19204730)
UniProt
RGD
PMID:19204730 GO_REF:0000024, MGI:3839226 NCBI chr 2:218,654,406...218,658,761
Ensembl chr 2:218,654,554...218,658,761
JBrowse link
G Sgms2 sphingomyelin synthase 2 ISS
ISO
IEA
GO_REF:0000024
(PMID:30779713)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:30779713 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:236,458,276...236,530,667
Ensembl chr 2:236,458,279...236,480,502
JBrowse link
G Suv39h1 suppressor of variegation 3-9 homolog 1 ISO MGI:1890508 (MGI:5913114|PMID:23695662) RGD PMID:23695662 MGI:5913114 NCBI chr  X:146,532,002...146,533,538 JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (PMID:19597909) RGD PMID:19597909 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Txlng taxilin gamma ISO (MGI:3587454|PMID:15911876), (MGI:5306578|PMID:19016261) RGD PMID:15911876, PMID:19016261 MGI:3587454, MGI:5306578 NCBI chr  X:33,599,643...33,648,525
Ensembl chr  X:33,599,671...33,646,444
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO MGI:1099440 (MGI:5913114|PMID:23695662) RGD PMID:23695662 MGI:5913114 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
regulation of ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO (PMID:16642017) RGD PMID:16642017 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 ISO MGI:4438907 (MGI:4438316|PMID:19767743) RGD PMID:19767743 MGI:4438316 NCBI chr 3:80,892,433...80,933,283
Ensembl chr 3:80,892,435...80,933,283
JBrowse link
G Csf1 colony stimulating factor 1 ISO MGI:1856333 (MGI:2670279|PMID:12865350) RGD PMID:12865350 MGI:2670279 NCBI chr 2:210,522,370...210,550,546
Ensembl chr 2:210,522,375...210,550,560
JBrowse link
G Dhrs3 dehydrogenase/reductase 3 ISO MGI:5007106 (MGI:5528782|PMID:24005908) RGD PMID:24005908 MGI:5528782 NCBI chr 5:162,809,090...162,843,385
Ensembl chr 5:162,808,646...162,843,383
JBrowse link
G Egr2 early growth response 2 ISO MGI:1857507 (MGI:78388|PMID:8565822) RGD PMID:8565822 MGI:78388 NCBI chr20:22,452,170...22,461,018
Ensembl chr20:22,454,463...22,459,025
JBrowse link
G Esrra estrogen related receptor, alpha IMP RGD PMID:12193582 RGD:625668 NCBI chr 1:222,168,729...222,178,842
Ensembl chr 1:222,168,730...222,178,725
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO MGI:2135670 (MGI:4437389|PMID:20053668) RGD PMID:20053668 MGI:4437389 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Gdf10 growth differentiation factor 10 IEP RGD PMID:12270110 RGD:632791 NCBI chr16:10,250,508...10,262,383
Ensembl chr16:10,250,404...10,263,150
JBrowse link
G Intu inturned planar cell polarity protein IEA
ISO
GO_REF:0000107
(MGI:5644615|PMID:25774014)
Ensembl
RGD
PMID:25774014 GO_REF:0000107, MGI:5644615 NCBI chr 2:127,589,325...127,611,705
Ensembl chr 2:127,459,012...127,525,437
JBrowse link
G Lrp6 LDL receptor related protein 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO MGI:1346859 (MGI:4437389|PMID:20053668) RGD PMID:20053668 MGI:4437389 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk14 mitogen activated protein kinase 14 IEA
ISO
GO_REF:0000107
(MGI:4437389|PMID:20053668)
Ensembl
RGD
PMID:20053668 GO_REF:0000107, MGI:4437389 NCBI chr20:5,933,290...5,995,137
Ensembl chr20:5,933,303...5,995,137
JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO MGI:1346858 (MGI:4437389|PMID:20053668) RGD PMID:20053668 MGI:4437389 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 ISO MGI:4830452 (MGI:4830073|PMID:20363744) RGD PMID:20363744 MGI:4830073 NCBI chr 5:138,279,597...138,294,280
Ensembl chr 5:138,279,506...138,294,262
JBrowse link
G Pbx1 PBX homeobox 1 ISO MGI:2155612 (MGI:2151355|PMID:11566859) RGD PMID:11566859 MGI:2151355 NCBI chr13:86,390,741...86,671,460
Ensembl chr13:86,390,741...86,451,002
JBrowse link
G Prl prolactin IMP RGD PMID:17218965 RGD:1642577 NCBI chr17:39,814,236...39,824,299
Ensembl chr17:39,814,244...39,824,299
JBrowse link
G Ptger4 prostaglandin E receptor 4 IEA
ISO
GO_REF:0000107
MGI:2137851 (MGI:1860392|PMID:10749873)
Ensembl
RGD
PMID:10749873 GO_REF:0000107, MGI:1860392 NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 IDA RGD PMID:10698968 RGD:631877 NCBI chr 6:45,655,947...45,669,083
Ensembl chr 6:45,655,954...45,669,148
JBrowse link
G Runx2 RUNX family transcription factor 2 ISO MGI:2176466 (MGI:1334093|PMID:10213384) RGD PMID:10213384 MGI:1334093 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IMP RGD PMID:15677765 RGD:1580305 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Six2 SIX homeobox 2 ISO (MGI:4822095|PMID:20515681) RGD PMID:20515681 MGI:4822095 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
G Smad5 SMAD family member 5 NAS RGD PMID:11920662 RGD:724455 NCBI chr17:8,307,448...8,336,996
Ensembl chr17:8,311,796...8,331,032
JBrowse link
regulation of osteoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO MGI:1857966 (MGI:3584206|PMID:15802266) RGD PMID:15802266 MGI:3584206 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
G Atf4 activating transcription factor 4 ISO
ISS
(PMID:15109498)
(MGI:3040115|PMID:15109498)
GO_REF:0000024
RGD
UniProt
PMID:15109498 GO_REF:0000024, MGI:3040115 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Ctnnb1 catenin beta 1 ISO MGI:2148567|MGI:3044412 (MGI:3511731|PMID:15576404), (MGI:3584206|PMID:15802266) RGD PMID:15576404, PMID:15802266 MGI:3511731, MGI:3584206 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ddx5 DEAD-box helicase 5 ISO (MGI:5315698|PMID:17960593) RGD PMID:17960593 MGI:5315698 NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461
JBrowse link
G Esrra estrogen related receptor, alpha IMP RGD PMID:11381083 RGD:1625633 NCBI chr 1:222,168,729...222,178,842
Ensembl chr 1:222,168,730...222,178,725
JBrowse link
G Fzd1 frizzled class receptor 1 IEP RGD PMID:1334084 RGD:61590 NCBI chr 4:26,470,864...26,475,262
Ensembl chr 4:26,470,864...26,475,262
JBrowse link
G Gli1 GLI family zinc finger 1 ISO (MGI:5429486|PMID:22493482) RGD PMID:22493482 MGI:5429486 NCBI chr 7:70,620,794...70,633,171
Ensembl chr 7:70,620,766...70,630,338
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:28731198 RGD:13792731 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hemgn hemogen IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11161722, PMID:21873635 RGD:632552, RGD:13792537 NCBI chr 5:62,004,271...62,025,075
Ensembl chr 5:62,005,071...62,025,152
JBrowse link
G Mir188 microRNA 188 ISO (MGI:5643971|PMID:25751060) RGD PMID:25751060 MGI:5643971 NCBI chr  X:16,110,270...16,110,349
Ensembl chr  X:16,110,270...16,110,349
JBrowse link
G Nell1 neural EGFL like 1 IMP RGD PMID:12235118 RGD:633405 NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958
JBrowse link
G Pias2 protein inhibitor of activated STAT, 2 ISO (MGI:3723333|PMID:17623776) RGD PMID:17623776 MGI:3723333 NCBI chr18:73,479,863...73,524,956
Ensembl chr18:73,378,662...73,524,956
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO
IEA
(PMID:19949837)
GO_REF:0000107
RGD
Ensembl
PMID:19949837 GO_REF:0000107 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Ptk2 protein tyrosine kinase 2 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16927379)
Ensembl
UniProt
RGD
PMID:16927379 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Rassf2 Ras association domain family member 2 IEA
ISO
GO_REF:0000107
MGI:5314787 (MGI:5314467|PMID:22227519)
Ensembl
RGD
PMID:22227519 GO_REF:0000107, MGI:5314467 NCBI chr 3:124,574,088...124,610,267
Ensembl chr 3:124,575,621...124,610,267
JBrowse link
G Rest RE1-silencing transcription factor ISS
ISO
GO_REF:0000024
(MGI:5641106|PMID:25838543)
UniProt
RGD
PMID:25838543 GO_REF:0000024, MGI:5641106 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
JBrowse link
G Runx2 RUNX family transcription factor 2 TAS
ISO
(MGI:5013854|PMID:21628588) RGD PMID:21628588, PMID:9651525 MGI:5013854, RGD:69800 NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
JBrowse link
G Smoc1 SPARC related modular calcium binding 1 ISO (PMID:20359165) RGD PMID:20359165 NCBI chr 6:104,718,403...104,879,611
Ensembl chr 6:104,718,512...104,877,980
JBrowse link
G Snai2 snail family transcriptional repressor 2 ISO (PMID:19756381), (PMID:21182836) RGD PMID:19756381, PMID:21182836 NCBI chr11:90,404,421...90,406,730
Ensembl chr11:90,403,333...90,406,797
JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 ISO MGI:1856973 (MGI:5315781|PMID:22351931) RGD PMID:22351931 MGI:5315781 NCBI chr 1:219,126,687...219,139,466
Ensembl chr 1:219,127,602...219,139,464
JBrowse link

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