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ONTOLOGY REPORT - ANNOTATIONS

Term:cartilage condensation
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Accession:GO:0001502 term browser browse the term
Definition:The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes.

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cartilage condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan acts_upstream_of_or_within ISO (PMID:3070812) MGI PMID:3070812 NCBI chrNW_004955416:16,125,536...16,186,046 JBrowse link
G Barx2 BARX homeobox 2 acts_upstream_of_or_within ISO (PMID:15800003) MGI PMID:15800003 NCBI chrNW_004955412:30,345,837...30,418,186
Ensembl chrNW_004955412:30,345,311...30,418,232 		JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B acts_upstream_of_or_within ISO (PMID:10631181) MGI PMID:10631181 NCBI chrNW_004955405:5,408,171...5,784,930
Ensembl chrNW_004955405:5,700,162...5,787,957 		JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO (PMID:15305294) MGI PMID:15305294 NCBI chrNW_004955436:12,523,602...12,526,986
Ensembl chrNW_004955436:12,522,944...12,526,480 		JBrowse link
G Chad chondroadherin ISO RGD PMID:9461555 RGD:69806 NCBI chrNW_004955451:11,285,822...11,289,644
Ensembl chrNW_004955451:11,285,822...11,289,644 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO (PMID:3070812) MGI PMID:3070812 NCBI chrNW_004955435:7,352,617...7,545,235
Ensembl chrNW_004955435:7,352,617...7,545,235 		JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within ISO (PMID:3070812) MGI PMID:3070812 NCBI chrNW_004955500:6,860,771...6,885,466
Ensembl chrNW_004955500:6,860,771...6,885,473 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO (PMID:8565825) MGI PMID:8565825 NCBI chrNW_004955422:16,362,418...16,364,126 JBrowse link
G Fgf6 fibroblast growth factor 6 acts_upstream_of_or_within ISO (PMID:8565825) MGI PMID:8565825 NCBI chrNW_004955413:2,246,965...2,257,883
Ensembl chrNW_004955413:2,246,965...2,257,883 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in ISO (MGI:5487758|PMID:17202865) AgBase PMID:17202865 MGI:5487758 NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083 		JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (PMID:17360777) MGI PMID:17360777 NCBI chrNW_004955487:9,219,528...9,224,818
Ensembl chrNW_004955487:9,219,528...9,224,818 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO (PMID:8565825) MGI PMID:8565825 NCBI chrNW_004955405:19,345,943...19,348,453
Ensembl chrNW_004955405:19,345,943...19,348,453 		JBrowse link
G Otor otoraplin acts_upstream_of_or_within ISO (PMID:10998416) MGI PMID:10998416 NCBI chrNW_004955415:25,897,320...25,901,059
Ensembl chrNW_004955415:25,897,320...25,901,059 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO (PMID:11593033) MGI PMID:11593033 NCBI chrNW_004955442:15,132,555...15,178,377
Ensembl chrNW_004955442:15,145,640...15,178,377 		JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (PMID:14745966) MGI PMID:14745966 NCBI chrNW_004955515:313,612...554,751
Ensembl chrNW_004955515:313,604...553,774 		JBrowse link
G Sox5 SRY-box transcription factor 5 involved_in ISO (MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235) UniProt PMID:11702786 PMID:14993235 MGI:2446758 MGI:3037234 NCBI chrNW_004955413:18,831,931...19,676,371
Ensembl chrNW_004955413:18,831,931...19,204,217 		JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISO (MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235) UniProt PMID:11702786 PMID:14993235 MGI:2446758 MGI:3037234 NCBI chrNW_004955414:30,965,626...31,532,473
Ensembl chrNW_004955414:30,971,920...31,335,263 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:10319868)
(PMID:12414734)		 MGI PMID:10319868 PMID:12414734 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563 		JBrowse link
G Tgfb2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:8565825) MGI PMID:8565825 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248 		JBrowse link
G Thra thyroid hormone receptor alpha acts_upstream_of_or_within ISO (PMID:9250685) MGI PMID:9250685 NCBI chrNW_004955451:14,731,746...14,743,545
Ensembl chrNW_004955451:14,731,746...14,744,367 		JBrowse link
G Uncx UNC homeobox acts_upstream_of_or_within ISO (PMID:10804168)
(PMID:10804169)		 MGI PMID:10804168 PMID:10804169 NCBI chrNW_004955460:8,941,629...8,945,761 JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:17202865) AgBase PMID:17202865 NCBI chrNW_004955429:12,647,993...12,693,998
Ensembl chrNW_004955429:12,647,993...12,694,895 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12346
    cellular process 11480
      cell aggregation 26
        cartilage condensation 22
          negative regulation of cartilage condensation 0
          positive regulation of cartilage condensation 0
          regulation of cartilage condensation + 0
Path 2
Term Annotations click to browse term
  biological_process 12346
    developmental process 5853
      anatomical structure development 5540
        multicellular organism development 4550
          system development 3953
            skeletal system development 534
              skeletal system morphogenesis 250
                cartilage condensation 22
                  negative regulation of cartilage condensation 0
                  positive regulation of cartilage condensation 0
                  regulation of cartilage condensation + 0
paths to the root