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ONTOLOGY REPORT - ANNOTATIONS

Term:cartilage condensation
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Accession:GO:0001502 term browser browse the term
Definition:The condensation of mesenchymal cells that have been committed to differentiate into chondrocytes.


show annotations for term's descendants           Sort by:
cartilage condensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856465 (MGI:2664273|PMID:3070812)		 Ensembl
RGD		 PMID:3070812 GO_REF:0000107 MGI:2664273 NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627 		JBrowse link
G Barx2 BARX homeobox 2 acts_upstream_of_or_within ISO (MGI:3578585|PMID:15800003) RGD PMID:15800003 MGI:3578585 NCBI chr 8:30,251,132...30,319,105
Ensembl chr 8:30,251,132...30,319,013 		JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B acts_upstream_of_or_within ISO MGI:2158498 (MGI:1351297|PMID:10631181) RGD PMID:10631181 MGI:1351297 NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368 		JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO (MGI:3050271|PMID:15305294) RGD PMID:15305294 MGI:3050271 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734 		JBrowse link
G Chad chondroadherin IEP RGD PMID:9461555 RGD:69806 NCBI chr10:79,512,170...79,515,941
Ensembl chr10:79,511,931...79,515,940 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain acts_upstream_of_or_within ISO MGI:1856399 (MGI:2664273|PMID:3070812) RGD PMID:3070812 MGI:2664273 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col2a1 collagen type II alpha 1 chain acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857275 (MGI:2664273|PMID:3070812)
GO_REF:0000107		 RGD
Ensembl		 PMID:3070812 GO_REF:0000107 MGI:2664273 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO MGI:98726 (MGI:78390|PMID:8565825) RGD PMID:8565825 MGI:78390 NCBI chr 1:200,023,937...200,027,793
Ensembl chr 1:200,024,056...200,025,466 		JBrowse link
G Fgf6 fibroblast growth factor 6 acts_upstream_of_or_within ISO MGI:98726 (MGI:78390|PMID:8565825) RGD PMID:8565825 MGI:78390 NCBI chr 4:159,854,913...159,863,447
Ensembl chr 4:159,854,913...159,863,447 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5487758|PMID:17202865)		 Ensembl
RGD		 PMID:17202865 GO_REF:0000107 MGI:5487758 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589 		JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3790402|PMID:17360777)
GO_REF:0000107		 RGD
Ensembl		 PMID:17360777 GO_REF:0000107 MGI:3790402 NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857219 (MGI:78390|PMID:8565825) RGD PMID:8565825 MGI:78390 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177 		JBrowse link
G Otor otoraplin involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
(MGI:1928405|PMID:10998416)		 RGD PMID:10998416 PMID:21873635 MGI:1928405, RGD:13792537 NCBI chr 3:130,415,339...130,418,601
Ensembl chr 3:130,415,339...130,418,601 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within ISO MGI:2152589 (MGI:2152028|PMID:11593033) RGD PMID:11593033 MGI:2152028 NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 acts_upstream_of_or_within ISO MGI:2183225 (MGI:3037488|PMID:14745966) RGD PMID:14745966 MGI:3037488 NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152 		JBrowse link
G Sox5 SRY-box transcription factor 5 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235)		 UniProt
RGD		 PMID:11702786 PMID:14993235 GO_REF:0000024 MGI:2446758 MGI:3037234 NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852 		JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISS
ISO		 GO_REF:0000024
(MGI:2446758|PMID:11702786), (MGI:3037234|PMID:14993235)		 UniProt
RGD		 PMID:11702786 PMID:14993235 GO_REF:0000024 MGI:2446758 MGI:3037234 NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2158693|MGI:2385468 (MGI:2159578|PMID:10319868), (MGI:2389523|PMID:12414734)		 UniProt
RGD		 PMID:10319868 PMID:12414734 GO_REF:0000024 MGI:2159578 MGI:2389523 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Sulf1 sulfatase 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:6,362,894...6,526,174
Ensembl chr 5:6,362,911...6,525,584 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within ISO MGI:95518|MGI:95520 (MGI:78390|PMID:8565825) RGD PMID:8565825 MGI:78390 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Thra thyroid hormone receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1860442 (MGI:894529|PMID:9250685)		 Ensembl
RGD		 PMID:9250685 GO_REF:0000107 MGI:894529 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936 		JBrowse link
G Uncx UNC homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1859373|MGI:1928812 (MGI:1855901|PMID:10804169), (MGI:1855902|PMID:10804168)		 Ensembl
RGD		 PMID:10804168 PMID:10804169 GO_REF:0000107 MGI:1855901 MGI:1855902 NCBI chr12:15,092,779...15,097,300
Ensembl chr12:15,092,784...15,097,300 		JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:17202865) RGD PMID:17202865 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19527
    cellular process 18201
      cell aggregation 28
        cartilage condensation 23
          negative regulation of cartilage condensation 0
          positive regulation of cartilage condensation 0
          regulation of cartilage condensation + 0
Path 2
Term Annotations click to browse term
  biological_process 19527
    developmental process 6898
      anatomical structure development 6425
        multicellular organism development 5175
          system development 4453
            skeletal system development 571
              skeletal system morphogenesis 266
                cartilage condensation 23
                  negative regulation of cartilage condensation 0
                  positive regulation of cartilage condensation 0
                  regulation of cartilage condensation + 0
paths to the root