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ONTOLOGY REPORT - ANNOTATIONS

Term:transcription termination site sequence-specific DNA binding
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Accession:GO:0001147 term browser browse the term
Definition:Binding to a sequence of DNA that promotes termination by RNA polymerase. The transcribed region might be described as a gene, cistron, or operon.
Comment:Transcription termination sites can be recognized by the RNA polymerase (RNAP) itself or by another protein which interacts with the RNAP to promote transcription termination. Note that not all genes have a DNA specific sequence that functions as a termination site; for most mRNAs transcribed by RNAP II termination is not mediated by a specific termination sequence, but is coupled to polyadenylation.
Synonyms:narrow_synonym: bacterial-type RNA polymerase termination site sequence-specific DNA binding;   mitochondrial RNA polymerase termination site sequence-specific DNA binding;   mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity;   transcription factor activity, mitochondrial RNA polymerase terminator site sequence-specific binding
 related_synonym: transcription termination site DNA binding
 alt_id: GO:0001145;   GO:0001146;   GO:0001148;   GO:0001160

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transcription termination site sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101697094 protein ZGRF1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624838:6,351,380...6,376,454 JBrowse link
G Setx senataxin enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:3,932,213...4,007,290
Ensembl chrNW_004624760:3,955,494...4,007,610 		JBrowse link
G Xrn2 5'-3' exoribonuclease 2 enables ISO (PMID:21700224) UniProt PMID:21700224 NCBI chrNW_004624741:21,691,099...21,768,267
Ensembl chrNW_004624741:21,691,199...21,767,790 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18466
    binding 16170
      nucleic acid binding 3919
        transcription regulatory region nucleic acid binding 1286
          transcription cis-regulatory region binding 1281
            transcription termination site sequence-specific DNA binding 3
Path 2
Term Annotations click to browse term
  molecular_function 18466
    binding 16170
      nucleic acid binding 3919
        DNA binding 2290
          double-stranded DNA binding 1436
            sequence-specific double-stranded DNA binding 1354
              transcription cis-regulatory region binding 1281
                transcription termination site sequence-specific DNA binding 3
paths to the root