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ONTOLOGY REPORT - ANNOTATIONS


Term:transcription termination site sequence-specific DNA binding
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Accession:GO:0001147 term browser browse the term
Definition:Binding to a sequence of DNA that promotes termination by RNA polymerase. The transcribed region might be described as a gene, cistron, or operon.
Comment:Transcription termination sites can be recognized by the RNA polymerase (RNAP) itself or by another protein which interacts with the RNAP to promote transcription termination. Note that not all genes have a DNA specific sequence that functions as a termination site; for most mRNAs transcribed by RNAP II termination is not mediated by a specific termination sequence, but is coupled to polyadenylation.
Synonyms:narrow_synonym: bacterial-type RNA polymerase termination site sequence-specific DNA binding;   mitochondrial RNA polymerase termination site sequence-specific DNA binding;   mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity;   transcription factor activity, mitochondrial RNA polymerase terminator site sequence-specific binding
 related_synonym: transcription termination site DNA binding
 alt_id: GO:0001145;   GO:0001146;   GO:0001148;   GO:0001160



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transcription termination site sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SETX senataxin enables IDA
IBA
(PMID:21700224) UniProt
GO_Central
PMID:21700224 GO_REF:0000033 NCBI chr 9:132,261,356...132,356,744
Ensembl chr 9:132,261,356...132,354,986
JBrowse link
G XRN2 5'-3' exoribonuclease 2 enables IDA (PMID:21700224) UniProt PMID:21700224 NCBI chr20:21,303,331...21,389,825
Ensembl chr20:21,303,331...21,389,825
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19545
    binding 18026
      organic cyclic compound binding 6758
        nucleic acid binding 4624
          transcription regulatory region nucleic acid binding 1571
            transcription cis-regulatory region binding 1566
              transcription termination site sequence-specific DNA binding 2
Path 2
Term Annotations click to browse term
  molecular_function 19545
    binding 18026
      organic cyclic compound binding 6758
        nucleic acid binding 4624
          DNA binding 2651
            double-stranded DNA binding 1737
              sequence-specific double-stranded DNA binding 1632
                transcription cis-regulatory region binding 1566
                  transcription termination site sequence-specific DNA binding 2
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