transcription termination site sequence-specific DNA binding - Ontology Report

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Term:	transcription termination site sequence-specific DNA binding	go back to main search page
Accession:	GO:0001147	browse the term
Definition:	Binding to a sequence of DNA that promotes termination by RNA polymerase. The transcribed region might be described as a gene, cistron, or operon.
Comment:	Transcription termination sites can be recognized by the RNA polymerase (RNAP) itself or by another protein which interacts with the RNAP to promote transcription termination. Note that not all genes have a DNA specific sequence that functions as a termination site; for most mRNAs transcribed by RNAP II termination is not mediated by a specific termination sequence, but is coupled to polyadenylation.
Synonyms:	narrow_synonym:	bacterial-type RNA polymerase termination site sequence-specific DNA binding; mitochondrial RNA polymerase termination site sequence-specific DNA binding; mitochondrial RNA polymerase terminator site sequence-specific DNA binding transcription factor activity; transcription factor activity, mitochondrial RNA polymerase terminator site sequence-specific binding
	related_synonym:	transcription termination site DNA binding
	alt_id:	GO:0001145; GO:0001146; GO:0001148; GO:0001160

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Genes (2)

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Setx

senataxin

enables

(PMID:21700224)
GO_REF:0000033

GO_REF:0000033

NCBI chr 3:12,428,091...12,480,801
Ensembl chr 3:12,427,635...12,480,803

5'-3' exoribonuclease 2

enables

(PMID:21700224)

NCBI chr 3:134,436,916...134,509,308
Ensembl chr 3:134,437,109...134,509,306

Term paths to the root

Path 1
Term	Annotations
molecular_function	20736
binding	17796
organic cyclic compound binding	6223
nucleic acid binding	3872
transcription regulatory region nucleic acid binding	1303
transcription cis-regulatory region binding	1298
transcription termination site sequence-specific DNA binding	2
Path 2
Term	Annotations
molecular_function	20736
binding	17796
organic cyclic compound binding	6223
nucleic acid binding	3872
DNA binding	2303
double-stranded DNA binding	1457
sequence-specific double-stranded DNA binding	1362
transcription cis-regulatory region binding	1298
transcription termination site sequence-specific DNA binding	2

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