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ONTOLOGY REPORT - ANNOTATIONS

Term:response to acid chemical
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Accession:GO:0001101 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.
Comment:This term should be used to describe a response to a specific acid as a chemical. E.g., if an organism were responding to glutamate, then the response would be glutamate-specific; the organism is actually responding to the chemical structure of the anion portion of the dissociated acid. Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC. If annotating experiments where an acid is playing a role as a proton donor, please annotate to GO:0010447 'response to acidic pH' instead.
Synonyms:broad_synonym: response to acid
 related_synonym: response to acid anion;   response to oxoanion


show annotations for term's descendants           Sort by:
cellular response to 3,3',5-triiodo-L-thyronine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 IEP RGD PMID:8922673 RGD:13207348 NCBI chr 6:135,436,375...135,502,117
Ensembl chr 6:129,609,397...129,680,883 		JBrowse link
G Myh6 myosin heavy chain 6 IEP RGD PMID:17111039 RGD:12792968 NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720 		JBrowse link
G Myh7 myosin heavy chain 7 IEP RGD PMID:17111039 RGD:12792968 NCBI chr15:32,416,525...32,439,851
Ensembl chr15:28,446,550...28,468,217 		JBrowse link
G Pnpla3 patatin-like phospholipase domain containing 3 IEP RGD PMID:19619606 RGD:14985223 NCBI chr 7:115,293,538...115,314,077
Ensembl chr 7:115,293,538...115,314,077 		JBrowse link
G Six1 SIX homeobox 1 IDA RGD PMID:22197309 RGD:11561984 NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
cellular response to amino acid stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ass1 argininosuccinate synthase 1 IEP glutamine RGD PMID:9893939 RGD:4142787 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903 		JBrowse link
G Atp7a ATPase copper transporting alpha IMP homocysteine RGD PMID:26722473 RGD:11341663 NCBI chr  X:75,159,635...75,267,094
Ensembl chr  X:71,094,202...71,198,354 		JBrowse link
G Bcl2l1 Bcl2-like 1 acts_upstream_of_or_within ISO MGI:2675966 (PMID:15231831) RGD PMID:15231831 NCBI chr 3:161,713,777...161,764,844
Ensembl chr 3:141,253,523...141,303,479
Ensembl chr 1:141,253,523...141,303,479 		JBrowse link
G Bcl2l2 Bcl2-like 2 IEP RGD PMID:11090983 RGD:14394513 NCBI chr15:32,326,686...32,337,834
Ensembl chr15:28,356,807...28,361,624 		JBrowse link
G Capn2 calpain 2 involved_in IDA
IEA
ISO 		PMID:22711986
GO_REF:0000107
(PMID:22711986) 		Ensembl
RGD		 PMID:22711986 PMID:22711986 GO_REF:0000107, RGD:8553623 NCBI chr13:96,681,902...96,732,625
Ensembl chr13:94,150,240...94,200,969 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP RGD PMID:20560880 RGD:4889887 NCBI chr10:68,820,330...68,824,906
Ensembl chr10:68,322,829...68,327,377 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta acts_upstream_of_or_within ISO
IEA 		(PMID:20548288)
GO_REF:0000107 		RGD
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chr 3:176,817,005...176,818,436
Ensembl chr 3:156,397,052...156,399,473 		JBrowse link
G Col16a1 collagen type XVI alpha 1 chain acts_upstream_of_or_within ISO
IEA 		(PMID:20548288)
GO_REF:0000107 		RGD
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chr 5:142,388,376...142,442,825
Ensembl chr 5:142,388,426...142,442,825 		JBrowse link
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO
IEA 		(PMID:20548288)
GO_REF:0000107 		RGD
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chr10:80,380,458...80,397,461
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col1a2 collagen type I alpha 2 chain acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 4:33,518,557...33,553,484
Ensembl chr 4:32,563,381...32,598,867 		JBrowse link
G Col3a1 collagen type III alpha 1 chain acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 9:54,866,646...54,902,578
Ensembl chr 9:47,374,593...47,410,547 		JBrowse link
G Col4a1 collagen type IV alpha 1 chain acts_upstream_of_or_within ISO
IEA 		(PMID:20548288)
GO_REF:0000107 		RGD
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chr16:84,885,597...84,996,482
Ensembl chr16:78,183,533...78,294,412 		JBrowse link
G Col4a6 collagen type IV alpha 6 chain acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr  X:104,766,463...105,117,499
Ensembl chr  X:104,766,957...105,117,500 		JBrowse link
G Col5a2 collagen type V alpha 2 chain acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO
IEA 		(PMID:20548288)
GO_REF:0000107 		RGD
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:20937770) 		UniProt
RGD		 PMID:20937770 GO_REF:0000024 NCBI chr 1:144,709,278...144,817,388
Ensembl chr 1:135,300,461...135,409,760 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO
IEA 		(PMID:20639532), (PMID:22730302)
GO_REF:0000107
(PMID:17024188), (PMID:20937770), (PMID:22153079), (PMID:22711986) 		RGD
Ensembl		 PMID:17024188 PMID:20639532 PMID:20937770 PMID:22153079 PMID:22711986 More... GO_REF:0000107 NCBI chr 1:244,161,690...244,343,765
Ensembl chr 1:234,751,733...234,931,560 		JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 involved_in IDA
ISO 		PMID:20937770
(PMID:20937770) 		RGD PMID:20937770 PMID:20937770 RGD:8553637 NCBI chr10:16,222,271...16,284,248
Ensembl chr10:15,717,794...15,780,603 		JBrowse link
G Cul3 cullin 3 involved_in ISO
IEA 		(PMID:29769719)
GO_REF:0000107 		RGD
Ensembl		 PMID:29769719 GO_REF:0000107 NCBI chr 9:89,040,987...89,118,775
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Dnmt1 DNA methyltransferase 1 acts_upstream_of_or_within ISO
IEA 		(PMID:20548288)
GO_REF:0000107 		RGD
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chr 8:27,716,797...27,763,405
Ensembl chr 8:19,440,611...19,486,659 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha acts_upstream_of_or_within ISO
IEA 		(PMID:20548288)
GO_REF:0000107 		RGD
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chr 6:32,507,316...32,621,678
Ensembl chr 6:26,822,609...26,896,687 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 3:162,590,777...162,629,313
Ensembl chr 3:142,130,592...142,169,124 		JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:22711986) RGD PMID:22711986 NCBI chr14:95,378,626...95,551,358
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G ENSRNOG00000066475 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr 7:1,169,039...1,178,734 JBrowse link
G Glra1 glycine receptor, alpha 1 involved_in ISO
IEA
ISS 		(PMID:16144831)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:16144831 GO_REF:0000024 GO_REF:0000107 NCBI chr10:39,625,853...39,727,897
Ensembl chr10:39,629,459...39,727,162 		JBrowse link
G Glra2 glycine receptor, alpha 2 involved_in ISO
IEA 		(PMID:2155780)
GO_REF:0000107 		RGD
Ensembl		 PMID:2155780 GO_REF:0000107 NCBI chr  X:29,020,377...29,241,666
Ensembl chr  X:29,020,557...29,241,666 		JBrowse link
G Glra3 glycine receptor, alpha 3 involved_in IDA PMID:23895467 UniProt PMID:23895467 RGD:11035333 NCBI chr16:34,199,937...34,848,773
Ensembl chr16:34,204,811...34,848,753 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 IEP glutamate RGD PMID:19913087 RGD:4107720 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IMP glycine RGD PMID:19154422 RGD:2326036 NCBI chr10:6,136,458...6,560,003
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP glutamate, N-methyl-D-aspartate RGD PMID:20336776 RGD:4107019 NCBI chr 4:170,297,811...170,775,420
Ensembl chr 4:168,599,546...169,042,279 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP carnitine RGD PMID:20508999 RGD:2326106 NCBI chr 2:188,564,348...188,590,872
Ensembl chr 2:185,875,616...185,902,130 		JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B IEP NMDA, AMPA RGD PMID:21471000 RGD:9999187 NCBI chr10:36,358,004...36,363,898
Ensembl chr10:35,857,041...35,863,344 		JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IEP N-methyl-D-aspartate RGD PMID:16569663 RGD:10042967 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEP glycine RGD PMID:24990929 RGD:10002784 NCBI chr17:6,269,302...6,280,429
Ensembl chr17:6,262,998...6,274,997 		JBrowse link
G Hsf1 heat shock transcription factor 1 IEP
IDA 		homocysteic acid
glutamine, ornithine 		RGD PMID:24478344 PMID:21512157 RGD:10402566, RGD:10402944 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Ipo5 importin 5 involved_in ISO (PMID:22730302) RGD PMID:22730302 NCBI chr15:97,990,755...98,041,074
Ensembl chr15:98,005,299...98,041,126 		JBrowse link
G Klhl22 kelch-like family member 22 involved_in IEA
ISO 		GO_REF:0000107
(PMID:29769719) 		Ensembl
RGD		 PMID:29769719 GO_REF:0000107 NCBI chr11:96,695,168...96,736,079
Ensembl chr11:83,190,891...83,231,770 		JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in ISS
IBA
IEA
ISO 		GO_REF:0000024
GO_REF:0000033
GO_REF:0000002
(PMID:20381137), (PMID:22980980) 		UniProt
GO_Central
InterPro
RGD		 PMID:20381137 PMID:22980980 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:156,272,116...156,277,687
Ensembl chr 1:156,272,064...156,291,179 		JBrowse link
G Lamtor1l1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 like 1 involved_in ISS
IBA
IEA 		GO_REF:0000024
GO_REF:0000033
GO_REF:0000002 		UniProt
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr  X:34,637,460...34,638,509
Ensembl chr  X:34,637,459...34,638,516 		JBrowse link
G Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 involved_in ISO
IBA 		(PMID:20381137), (PMID:22980980)
GO_REF:0000033 		RGD
GO_Central		 PMID:20381137 PMID:22980980 GO_REF:0000033 NCBI chr 2:174,008,556...174,011,950
Ensembl chr 2:174,008,548...174,013,013 		JBrowse link
G Lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 involved_in ISS
IBA
IEA
ISO 		GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:20381137), (PMID:22980980) 		UniProt
GO_Central
Ensembl
RGD		 PMID:20381137 PMID:22980980 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:226,411,389...226,423,612
Ensembl chr 2:226,411,400...226,423,607 		JBrowse link
G Lamtor4 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 involved_in ISO
IEA
IBA 		(PMID:22980980)
GO_REF:0000002
GO_REF:0000107
GO_REF:0000033 		RGD
InterPro
Ensembl
GO_Central		 PMID:22980980 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr12:17,258,656...17,262,478
Ensembl chr12:17,258,623...17,262,480 		JBrowse link
G Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 involved_in ISO
IBA 		(PMID:22980980)
GO_REF:0000033 		RGD
GO_Central		 PMID:22980980 GO_REF:0000033 NCBI chr 2:194,900,038...194,905,394
Ensembl chr 2:194,900,038...194,905,395 		JBrowse link
G Lars1 leucyl-tRNA synthetase 1 involved_in ISO
IEA 		(PMID:22424946)
GO_REF:0000107 		RGD
Ensembl		 PMID:22424946 GO_REF:0000107 NCBI chr18:34,201,555...34,256,003
Ensembl chr18:34,201,549...34,255,931 		JBrowse link
G Mir101-2 microRNA 101-2 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 1:226,860,371...226,860,467
Ensembl chr 1:226,860,371...226,860,467 		JBrowse link
G Mir101a microRNA 101a acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 5:115,966,332...115,966,406
Ensembl chr 5:115,966,328...115,966,410 		JBrowse link
G Mir103a1 microRNA 103a-1 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr10:20,244,412...20,244,497
Ensembl chr10:20,244,412...20,244,497 		JBrowse link
G Mir103a2 microRNA 103a-2 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 3:138,963,227...138,963,312
Ensembl chr 3:118,510,194...118,510,279 		JBrowse link
G Mir107 microRNA 107 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 1:232,337,767...232,337,853
Ensembl chr 1:232,337,767...232,337,853 		JBrowse link
G Mir122 microRNA 122 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr18:58,758,703...58,758,787 JBrowse link
G Mir1224 microRNA 1224 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr11:80,306,902...80,306,986
Ensembl chr11:80,306,902...80,306,986 		JBrowse link
G Mir130a microRNA 130a acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 3:69,822,542...69,822,629
Ensembl chr 3:69,822,542...69,822,629 		JBrowse link
G Mir134 microRNA 134 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 6:128,748,908...128,748,980 JBrowse link
G Mir137 microRNA 137 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985 		JBrowse link
G Mir145 microRNA 145 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr18:57,369,983...57,370,070
Ensembl chr18:55,099,640...55,099,727 		JBrowse link
G Mir151 microRNA 151 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 7:105,172,377...105,172,473 JBrowse link
G Mir155 microRNA 155 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr11:37,261,114...37,261,178
Ensembl chr11:23,774,654...23,774,718 		JBrowse link
G Mir15b microRNA 15b acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297 		JBrowse link
G Mir183 microRNA 183 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 4:58,788,614...58,788,723
Ensembl chr 4:58,788,614...58,788,723 		JBrowse link
G Mir191 microRNA 191 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 8:109,264,098...109,264,188 JBrowse link
G Mir192 microRNA 192 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 1:203,564,946...203,565,055
Ensembl chr 1:203,564,946...203,565,055 		JBrowse link
G Mir193a microRNA 193a acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr10:64,672,343...64,672,454
Ensembl chr10:64,672,343...64,672,454 		JBrowse link
G Mir194-1 microRNA 194-1 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr13:96,851,166...96,851,248
Ensembl chr13:96,851,166...96,851,248 		JBrowse link
G Mir194-2 microRNA 194-2 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 1:203,564,761...203,564,845
Ensembl chr 1:203,564,761...203,564,845 		JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr13:74,582,954...74,583,063
Ensembl chr13:74,582,954...74,583,063 		JBrowse link
G Mir200b microRNA 200b acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366 		JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir203-2 microRNA 203-2 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 6:131,199,542...131,199,656
Ensembl chr 6:131,199,542...131,199,656 		JBrowse link
G Mir214 microRNA 214 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr13:77,121,645...77,121,752
Ensembl chr13:74,588,372...74,588,481 		JBrowse link
G Mir216b microRNA 216b acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr14:102,513,054...102,513,155
Ensembl chr14:102,513,054...102,513,155 		JBrowse link
G Mir217 microRNA 217 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr14:102,531,505...102,531,609
Ensembl chr14:102,531,505...102,531,609 		JBrowse link
G Mir22 microRNA 22 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr10:60,805,331...60,805,425
Ensembl chr10:60,307,039...60,307,133 		JBrowse link
G Mir221 microRNA 221 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr  X:6,023,182...6,023,290
Ensembl chr  X:3,429,465...3,429,573 		JBrowse link
G Mir222 microRNA 222 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr  X:6,022,621...6,022,723
Ensembl chr  X:3,428,904...3,429,006 		JBrowse link
G Mir224 microRNA 224 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr  X:150,065,088...150,065,169
Ensembl chr  X:150,065,088...150,065,169 		JBrowse link
G Mir30a microRNA 30a acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 9:33,233,941...33,234,011
Ensembl chr 9:25,737,600...25,737,670 		JBrowse link
G Mir30d microRNA 30d acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 7:100,136,391...100,136,472
Ensembl chr 7:100,136,391...100,136,472 		JBrowse link
G Mir30e microRNA 30e acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 5:134,352,232...134,352,323
Ensembl chr 5:134,352,232...134,352,323 		JBrowse link
G Mir31 microRNA 31 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 5:103,599,038...103,599,143 JBrowse link
G Mir342 microRNA 342 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367 		JBrowse link
G Mir346 microRNA 346 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr16:10,218,118...10,218,215
Ensembl chr16:10,218,118...10,218,215 		JBrowse link
G Mir34a microRNA 34a acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103 		JBrowse link
G Mir365b microRNA 365b acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr10:64,686,255...64,686,340
Ensembl chr10:64,686,252...64,686,351 		JBrowse link
G Mir382 microRNA 382 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 6:128,748,539...128,748,618 JBrowse link
G Mir425 microRNA 425 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 8:109,264,555...109,264,637
Ensembl chr 8:109,264,555...109,264,637 		JBrowse link
G Mir429 microRNA 429 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 5:166,647,459...166,647,543
Ensembl chr 5:166,647,459...166,647,543 		JBrowse link
G Mir451a microRNA 451a acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr10:62,961,520...62,961,591
Ensembl chr10:62,961,520...62,961,591 		JBrowse link
G Mir455 microRNA 455 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 5:76,689,313...76,689,390
Ensembl chr 5:76,689,313...76,689,390 		JBrowse link
G Mir486 microRNA 486 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288
G Mir676 microRNA 676 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr  X:65,464,494...65,464,582
Ensembl chr  X:65,464,494...65,464,582 		JBrowse link
G Mir708 microRNA 708 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 1:150,599,876...150,599,963
Ensembl chr 1:150,599,876...150,599,963 		JBrowse link
G Mir802 microRNA 802 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr11:32,626,525...32,626,620
Ensembl chr11:32,626,525...32,626,620 		JBrowse link
G Mir92a1 microRNA 92a-1 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr15:98,588,555...98,588,632
Ensembl chr15:92,181,336...92,181,413 		JBrowse link
G Mir92a2 microRNA 92a-2 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr  X:132,421,942...132,422,033
Ensembl chr  X:132,421,942...132,422,033 		JBrowse link
G Mir92b microRNA 92b acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 2:174,633,890...174,633,972
Ensembl chr 2:174,633,890...174,633,972 		JBrowse link
G Mir99a microRNA 99a acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr11:29,687,392...29,687,472
Ensembl chr11:16,200,443...16,200,523 		JBrowse link
G Mirlet7a1 microRNA let-7a-1 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr17:16,113,766...16,113,859
Ensembl chr17:16,113,768...16,113,867 		JBrowse link
G Mirlet7d microRNA let-7d acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr17:16,115,893...16,115,990
Ensembl chr17:16,115,893...16,115,990 		JBrowse link
G Mirlet7f-1 microRNA let7f-1 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr17:16,114,130...16,114,226
Ensembl chr17:16,114,130...16,114,226 		JBrowse link
G Mirlet7f2 microRNA let-7f-2 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr  X:20,980,632...20,980,714
Ensembl chr  X:20,980,632...20,980,714 		JBrowse link
G Mirlet7i microRNA let-7i acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 7:58,642,485...58,642,569
Ensembl chr 7:58,642,480...58,642,571 		JBrowse link
G Mmp2 matrix metallopeptidase 2 acts_upstream_of_or_within ISO
IEA 		(PMID:20548288)
GO_REF:0000107 		RGD
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chr19:30,327,643...30,355,856
Ensembl chr19:14,154,657...14,182,870 		JBrowse link
G Mmp3 matrix metallopeptidase 3 acts_upstream_of_or_within ISO
IEA 		(PMID:20548288)
GO_REF:0000107 		RGD
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chr 8:12,925,267...12,938,828
Ensembl chr 8:4,640,416...4,653,961 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO
IEA 		(PMID:22424946)
GO_REF:0000107 		RGD
Ensembl		 PMID:22424946 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 involved_in ISO
IEA 		(PMID:22153079)
GO_REF:0000107 		RGD
Ensembl		 PMID:22153079 GO_REF:0000107 NCBI chr 1:246,066,830...246,152,890
Ensembl chr 1:246,067,100...246,152,903 		JBrowse link
G Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor involved_in IDA PMID:18303947 UniProt PMID:18303947 RGD:8553324 NCBI chr 3:7,861,846...7,870,615
Ensembl chr 3:7,861,872...7,870,614 		JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 acts_upstream_of_or_within ISO
IEA 		(PMID:25542970)
GO_REF:0000107 		RGD
Ensembl		 PMID:25542970 GO_REF:0000107 NCBI chr17:5,560,558...5,875,899
Ensembl chr17:5,559,043...5,869,136 		JBrowse link
G Pdgfc platelet derived growth factor C acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr 2:166,316,870...166,493,449
Ensembl chr 2:166,316,803...166,493,433 		JBrowse link
G Pdgfd platelet derived growth factor D acts_upstream_of_or_within ISO
IEA 		(PMID:20548288)
GO_REF:0000107 		RGD
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chr 8:3,488,448...3,722,395
Ensembl chr 8:3,488,423...3,722,395 		JBrowse link
G Pdgfra platelet derived growth factor receptor alpha acts_upstream_of_or_within ISO
IEA 		(PMID:20548288)
GO_REF:0000107 		RGD
Ensembl		 PMID:20548288 GO_REF:0000107 NCBI chr14:33,360,027...33,408,604
Ensembl chr14:33,005,839...33,054,335 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO
IEA 		(PMID:29769719)
GO_REF:0000107 		RGD
Ensembl		 PMID:29769719 GO_REF:0000107 NCBI chr 7:114,870,893...114,881,194
Ensembl chr 7:112,990,835...113,001,051 		JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 involved_in ISO
IEA
IBA 		(PMID:20381137)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:20381137 GO_REF:0000033 GO_REF:0000107 NCBI chr10:105,376,943...105,675,416
Ensembl chr10:104,878,487...105,176,983 		JBrowse link
G Rraga Ras-related GTP binding A involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
GO_REF:0000104
(PMID:20381137) 		UniProt
Ensembl
RGD		 PMID:20381137 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr 5:101,113,341...101,114,936
Ensembl chr 5:101,112,859...101,114,510 		JBrowse link
G Rragb Ras-related GTP binding B involved_in ISO
IEA
ISS 		(PMID:20381137)
GO_REF:0000107
GO_REF:0000104
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:20381137 GO_REF:0000024 GO_REF:0000104 GO_REF:0000107 NCBI chr  X:18,184,619...18,234,639
Ensembl chr  X:18,184,992...18,234,639 		JBrowse link
G Rragc Ras-related GTP binding C involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:136,148,239...136,167,773
Ensembl chr 5:136,148,276...136,167,767 		JBrowse link
G Rragd Ras-related GTP binding D involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:47,373,902...47,409,369
Ensembl chr 5:47,373,463...47,409,356 		JBrowse link
G Sesn1 sestrin 1 involved_in ISO
IEA 		(PMID:25259925)
GO_REF:0000107 		RGD
Ensembl		 PMID:25259925 GO_REF:0000107 NCBI chr20:46,876,918...46,970,010
Ensembl chr20:45,294,871...45,387,697 		JBrowse link
G Sesn2 sestrin 2 involved_in ISO
IEA 		(PMID:25457612)
GO_REF:0000107
(PMID:25259925) 		RGD
Ensembl		 PMID:25259925 PMID:25457612 GO_REF:0000107 NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260 		JBrowse link
G Sesn3 sestrin 3 involved_in ISO (PMID:25259925) RGD PMID:25259925 NCBI chr 8:11,133,822...11,189,436
Ensembl chr 8:11,133,678...11,185,842 		JBrowse link
G Sh3bp4 SH3-domain binding protein 4 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:22575674) 		UniProt
Ensembl
RGD		 PMID:22575674 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:89,660,156...89,739,163
Ensembl chr 9:89,660,156...89,739,163 		JBrowse link
G Slc38a9 solute carrier family 38, member 9 involved_in ISS
ISO 		GO_REF:0000024
(PMID:25561175), (PMID:25567906), (PMID:29053970) 		UniProt
RGD		 PMID:25561175 PMID:25567906 PMID:29053970 GO_REF:0000024 NCBI chr 2:46,024,731...46,102,419
Ensembl chr 2:44,291,989...44,368,955 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 IEP RGD PMID:9882595 RGD:151357002 NCBI chr19:66,843,808...66,872,412
Ensembl chr19:49,935,220...49,963,823 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr10:5,389,574...5,391,265
Ensembl chr10:4,882,560...4,884,383 		JBrowse link
G Spaar small regulatory polypeptide of amino acid response involved_in ISO (PMID:28024296) RGD PMID:28024296 NCBI chr 5:57,985,423...57,987,482 JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24753614) 		UniProt
Ensembl
RGD		 PMID:24753614 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,604,623...84,609,707
Ensembl chr14:80,390,643...80,395,693 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within ISO (PMID:20548288) RGD PMID:20548288 NCBI chr17:56,644,397...56,811,155
Ensembl chr17:51,948,948...52,115,214 		JBrowse link
cellular response to glycine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 IDA RGD PMID:21847098 RGD:8553599 NCBI chr 7:62,897,282...62,914,295
Ensembl chr 7:62,897,282...62,914,295 		JBrowse link
G Bcl2l2 Bcl2-like 2 IEP RGD PMID:11090983 RGD:14394513 NCBI chr15:32,326,686...32,337,834
Ensembl chr15:28,356,807...28,361,624 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in IMP PMID:17526495 ARUK-UCL PMID:17526495 RGD:13506268 NCBI chr20:44,322,635...44,514,498
Ensembl chr20:42,766,369...42,959,911 		JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 IDA RGD PMID:21847098 RGD:8553599 NCBI chr 2:168,247,490...168,367,616
Ensembl chr 2:165,947,521...166,069,510 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 IEP RGD PMID:23678131 RGD:401940177 NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:8,103,680...8,130,603 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP RGD PMID:23678131 RGD:401940177 NCBI chr10:6,136,458...6,560,003
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Grin3b glutamate ionotropic receptor NMDA type subunit 3B IDA RGD PMID:11823786 RGD:632842 NCBI chr 7:9,730,861...9,737,183
Ensembl chr 7:9,730,862...9,737,183 		JBrowse link
G Myo5b myosin Vb IEP RGD PMID:18984164 RGD:11533643 NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745 		JBrowse link
cellular response to homocysteine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk2b calcium/calmodulin-dependent protein kinase II beta IEP RGD PMID:25126162 RGD:13681928 NCBI chr14:85,059,166...85,148,121
Ensembl chr14:80,845,238...80,933,994 		JBrowse link
G Pla2g4a phospholipase A2 group 4A IEP RGD PMID:31125437 RGD:401940166 NCBI chr13:64,427,921...64,572,352
Ensembl chr13:61,877,813...62,022,266 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IEP RGD PMID:31125437 RGD:401940166 NCBI chr13:64,714,063...64,722,320
Ensembl chr13:62,163,932...62,172,188 		JBrowse link
cellular response to hydrostatic pressure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP RGD PMID:21047944 RGD:4890042 NCBI chr 8:63,449,148...63,476,534
Ensembl chr 8:54,553,165...54,580,758 		JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:16226958 RGD:8686427 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:22644739 RGD:7240524 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in ISO
IEA 		(PMID:30568254)
GO_REF:0000107 		RGD
Ensembl		 PMID:30568254 GO_REF:0000107 NCBI chr 2:117,103,643...117,177,411
Ensembl chr 2:115,174,984...115,249,032 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:16025301) RGD PMID:16025301 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825 		JBrowse link
G Plec plectin involved_in ISO
IEA 		(PMID:25447312)
GO_REF:0000107 		RGD
Ensembl		 PMID:25447312 GO_REF:0000107 NCBI chr 7:109,768,447...109,829,798
Ensembl chr 7:107,887,764...107,945,467 		JBrowse link
G Sncg synuclein, gamma IEP RGD PMID:11933054 RGD:6480100 NCBI chr16:9,706,765...9,712,072
Ensembl chr16:9,700,514...9,705,368 		JBrowse link
G Wnt10b Wnt family member 10B IEP RGD PMID:19118527 RGD:2326236 NCBI chr 7:131,801,046...131,806,850
Ensembl chr 7:129,922,088...129,927,892 		JBrowse link
G Wnt4 Wnt family member 4 IEP RGD PMID:19118527 RGD:2326236 NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
cellular response to kainic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epor erythropoietin receptor IEP RGD PMID:18711747 RGD:11041671 NCBI chr 8:28,765,738...28,770,371
Ensembl chr 8:20,489,678...20,494,257 		JBrowse link
cellular response to L-arginine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Castor1 cytosolic arginine sensor for mTORC1 subunit 1 involved_in ISS
IEA
IBA
ISO 		GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:26972053), (PMID:33594058) 		UniProt
Ensembl
GO_Central
RGD		 PMID:26972053 PMID:33594058 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:79,086,136...79,090,549
Ensembl chr14:79,086,136...79,090,548 		JBrowse link
G Castor2 cytosolic arginine sensor for mTORC1 subunit 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:22,577,504...22,620,182
Ensembl chr12:22,577,512...22,620,182 		JBrowse link
G Reg3b regenerating family member 3 beta IEP RGD PMID:10630385 RGD:9831424 NCBI chr 4:112,419,776...112,423,014
Ensembl chr 4:110,861,775...110,865,015 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 IEP RGD PMID:10681508 RGD:151361135 NCBI chr19:66,843,808...66,872,412
Ensembl chr19:49,935,220...49,963,823 		JBrowse link
cellular response to L-dopa term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rapgef3 Rap guanine nucleotide exchange factor 3 IEP RGD PMID:25044243 RGD:10041045 NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521 		JBrowse link
cellular response to L-glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:25962137 RGD:11041133 NCBI chr 4:26,312,403...26,488,456
Ensembl chr 4:25,158,362...25,442,709 		JBrowse link
G Amigo1 adhesion molecule with Ig like domain 1 IDA RGD PMID:22056818 RGD:14390155 NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585 		JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 IMP RGD PMID:28777375 RGD:13800748 NCBI chr10:81,520,762...81,523,735
Ensembl chr10:81,023,925...81,027,124
Ensembl chr10:81,023,925...81,027,124 		JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 IEP RGD PMID:15758177 RGD:9684984 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134 		JBrowse link
G Bcl11a BCL11 transcription factor A IEP RGD PMID:20534004 RGD:11100020 NCBI chr14:102,230,147...102,325,289
Ensembl chr14:98,030,461...98,124,180 		JBrowse link
G Bcl2 BCL2, apoptosis regulator IEP RGD PMID:26607632 RGD:597538583 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 IEP RGD PMID:28350885 RGD:405649727 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 IEP RGD PMID:22817682 RGD:11566024 NCBI chr  X:152,284,857...152,322,686
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in IMP PMID:17526495 ARUK-UCL PMID:17526495 RGD:13506268 NCBI chr20:44,322,635...44,514,498
Ensembl chr20:42,766,369...42,959,911 		JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 IEP RGD PMID:12390532 RGD:405649864 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283 		JBrowse link
G Grin2d glutamate ionotropic receptor NMDA type subunit 2D IMP RGD PMID:15107472 RGD:1642397 NCBI chr 1:105,443,317...105,483,400
Ensembl chr 1:96,308,365...96,344,793 		JBrowse link
G Hpca hippocalcin IDA RGD PMID:20704590 RGD:9686447 NCBI chr 5:141,455,616...141,466,252
Ensembl chr 5:141,455,613...141,463,841 		JBrowse link
G Lmnb1 lamin B1 IDA RGD PMID:21389115 RGD:10044247 NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502 		JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:25416777 RGD:13204765 NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342 		JBrowse link
G Nrg1 neuregulin 1 IEP RGD PMID:28350885 RGD:405649727 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IEP RGD PMID:28761318 RGD:13432138 NCBI chr11:84,612,943...84,690,025
Ensembl chr11:71,109,873...71,185,109 		JBrowse link
G Optn optineurin IEP RGD PMID:28761318 RGD:13432138 NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251 		JBrowse link
G Pcp4 Purkinje cell protein 4 IEP RGD PMID:18502590 RGD:9850275 NCBI chr11:35,759,711...35,861,725
Ensembl chr11:35,800,713...35,861,725 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IDA RGD PMID:25478815 RGD:13204761 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Shh sonic hedgehog signaling molecule IEP RGD PMID:26607632 RGD:597538583 NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
cellular response to L-glutamine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyba cytochrome b-245 alpha chain IEP RGD PMID:12241540 RGD:2291907 NCBI chr19:50,487,598...50,495,669
Ensembl chr19:50,487,597...50,495,721 		JBrowse link
G Cybb cytochrome b-245 beta chain IEP RGD PMID:12241540 RGD:2291907 NCBI chr  X:16,030,596...16,065,065
Ensembl chr  X:13,359,430...13,392,586 		JBrowse link
G Hsf1 heat shock transcription factor 1 IEP RGD PMID:23185570 PMID:23055521 RGD:10450472, RGD:10450473 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IEP RGD PMID:28761318 RGD:13432138 NCBI chr 1:51,236,410...52,430,242
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
cellular response to L-leucine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ep300 E1A binding protein p300 involved_in ISO (PMID:30197302), (PMID:32561715) RGD PMID:30197302 PMID:32561715 NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Hnf1a HNF1 homeobox A IMP RGD PMID:21874357 RGD:150540304 NCBI chr12:47,299,171...47,333,457
Ensembl chr12:41,645,587...41,672,104 		JBrowse link
G Klhl22 kelch-like family member 22 involved_in ISO
ISS 		(PMID:29769719)
GO_REF:0000024 		RGD
UniProt		 PMID:29769719 GO_REF:0000024 NCBI chr11:96,695,168...96,736,079
Ensembl chr11:83,190,891...83,231,770 		JBrowse link
G Lars1 leucyl-tRNA synthetase 1 involved_in ISO
IEA 		(PMID:22424946)
GO_REF:0000107 		RGD
Ensembl		 PMID:22424946 GO_REF:0000107 NCBI chr18:34,201,555...34,256,003
Ensembl chr18:34,201,549...34,255,931 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO
IEA 		(PMID:22424946)
GO_REF:0000107 		RGD
Ensembl		 PMID:22424946 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 involved_in ISO
IEA 		(PMID:22424946)
GO_REF:0000107 		RGD
Ensembl		 PMID:22424946 GO_REF:0000107 NCBI chr10:105,376,943...105,675,416
Ensembl chr10:104,878,487...105,176,983 		JBrowse link
G Rragd Ras-related GTP binding D involved_in ISO (PMID:22424946) RGD PMID:22424946 NCBI chr 5:47,373,902...47,409,369
Ensembl chr 5:47,373,463...47,409,356 		JBrowse link
G Sesn1 sestrin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:46,876,918...46,970,010
Ensembl chr20:45,294,871...45,387,697 		JBrowse link
G Sesn2 sestrin 2 involved_in ISO
IEA
IBA 		(PMID:26449471), (PMID:26586190)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:26449471 PMID:26586190 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260 		JBrowse link
G Sesn3 sestrin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:11,133,822...11,189,436
Ensembl chr 8:11,133,678...11,185,842 		JBrowse link
G Stambpl1 STAM binding protein-like 1 involved_in ISO
IEA 		(PMID:35114100)
GO_REF:0000107 		RGD
Ensembl		 PMID:35114100 GO_REF:0000107 NCBI chr 1:231,699,620...231,745,034
Ensembl chr 1:231,699,995...231,745,032 		JBrowse link
G Ubr1 ubiquitin protein ligase E3 component n-recognin 1 involved_in ISO
IEA 		(PMID:20298436)
GO_REF:0000107 		RGD
Ensembl		 PMID:20298436 GO_REF:0000107 NCBI chr 3:107,813,721...107,921,701
Ensembl chr 3:107,811,392...107,922,204 		JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO
IEA 		(PMID:20298436)
GO_REF:0000107 		RGD
Ensembl		 PMID:20298436 GO_REF:0000107 NCBI chr 9:21,480,058...21,559,936
Ensembl chr 9:13,982,329...14,062,139 		JBrowse link
cellular response to methionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk1 mitogen activated protein kinase 1 IEP RGD PMID:22676582 RGD:405100711 NCBI chr11:97,462,025...97,529,193
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mat2a methionine adenosyltransferase 2A involved_in ISO (PMID:38006878) RGD PMID:38006878 NCBI chr 4:106,048,043...106,053,612
Ensembl chr 4:104,488,466...104,495,493 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO
IEA 		(PMID:38006878)
GO_REF:0000107 		RGD
Ensembl		 PMID:38006878 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IEP RGD PMID:1201245 RGD:6893692 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 IEP RGD PMID:22676582 RGD:405100711 NCBI chr 3:81,001,529...81,031,165
Ensembl chr 3:60,594,242...60,621,737 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:38006878) 		UniProt
Ensembl
RGD		 PMID:38006878 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:104,595,339...104,605,552
Ensembl chr 1:95,458,850...95,468,345 		JBrowse link
G Samtor S-adenosylmethionine sensor upstream of mTORC1 involved_in ISO
IEA 		(PMID:29123071), (PMID:35776786)
GO_REF:0000107 		RGD
Ensembl		 PMID:29123071 PMID:35776786 GO_REF:0000107 NCBI chr 4:41,881,630...41,945,472
Ensembl chr 4:41,879,993...41,945,539 		JBrowse link
cellular response to phenylalanine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fas Fas cell surface death receptor IEP RGD PMID:23940767 RGD:8663468 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr 1:104,741,487...104,741,571
Ensembl chr 1:95,605,024...95,605,108 		JBrowse link
G Mir154 microRNA 154 acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr 6:128,752,947...128,753,030
Ensembl chr 6:128,752,947...128,753,030 		JBrowse link
G Mir22 microRNA 22 acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr10:60,805,331...60,805,425
Ensembl chr10:60,307,039...60,307,133 		JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr19:40,859,769...40,859,843
Ensembl chr19:23,954,997...23,955,071 		JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790 		JBrowse link
G Mir27a microRNA 27a acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917 		JBrowse link
G Mir301a microRNA 301a acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr10:72,422,599...72,422,698
Ensembl chr10:71,925,336...71,925,435 		JBrowse link
G Mir377 microRNA 377 acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr 6:134,576,456...134,576,527 JBrowse link
G Mir382 microRNA 382 acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr 6:128,748,539...128,748,618 JBrowse link
G Mir409 microRNA 409 acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr 6:128,757,780...128,757,856
Ensembl chr 6:128,757,779...128,757,858 		JBrowse link
G Mir487b microRNA 487b acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr 6:128,741,485...128,741,566
Ensembl chr 6:128,741,485...128,741,566 		JBrowse link
G Mir496 microRNA 496 acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr 6:128,753,644...128,753,722
Ensembl chr 6:128,753,644...128,753,722 		JBrowse link
G Mir544 microRNA 544 acts_upstream_of_or_within ISO (PMID:26822703) RGD PMID:26822703 NCBI chr 6:128,743,530...128,743,607
Ensembl chr 6:128,743,530...128,743,607 		JBrowse link
cellular response to thyroxine stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gclc glutamate-cysteine ligase, catalytic subunit IEP RGD PMID:17291985 RGD:10402376 NCBI chr 8:87,510,251...87,548,896
Ensembl chr 8:78,630,127...78,668,544 		JBrowse link
G Gclm glutamate cysteine ligase, modifier subunit IEP RGD PMID:17291985 RGD:10402376 NCBI chr 2:213,032,135...213,052,192
Ensembl chr 2:210,347,482...210,367,535 		JBrowse link
G L1cam L1 cell adhesion molecule IEP RGD PMID:11085884 RGD:11570514 NCBI chr  X:151,597,270...151,623,776
Ensembl chr  X:151,597,277...151,623,857 		JBrowse link
cellular response to water deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp2 aquaporin 2 acts_upstream_of_or_within IDA
IEA
ISO 		GO_REF:0000107
(PMID:10191086) 		Ensembl
RGD		 PMID:10191086 PMID:15196935 GO_REF:0000107, RGD:2313141 NCBI chr 7:132,590,286...132,595,321
Ensembl chr 7:130,711,413...130,716,468 		JBrowse link
G Avpr1a arginine vasopressin receptor 1A IEP RGD PMID:11796498 RGD:70387 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215 		JBrowse link
G Sipa1 signal-induced proliferation-associated 1 IDA RGD PMID:15196935 RGD:2313141 NCBI chr 1:202,938,532...202,950,672
Ensembl chr 1:202,938,580...202,950,591 		JBrowse link
cellular stress response to acid chemical term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf2 KLF transcription factor 2 involved_in ISO
IEA 		(PMID:26299712)
GO_REF:0000107 		RGD
Ensembl		 PMID:26299712 GO_REF:0000107 NCBI chr16:17,521,107...17,523,739
Ensembl chr16:17,514,552...17,523,944 		JBrowse link
G Mir92a1 microRNA 92a-1 involved_in ISO (PMID:26299712) RGD PMID:26299712 NCBI chr15:98,588,555...98,588,632
Ensembl chr15:92,181,336...92,181,413 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
IEA 		(PMID:26299712)
GO_REF:0000107 		RGD
Ensembl		 PMID:26299712 GO_REF:0000107 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
response to 3,3',5-triiodo-L-thyronine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1b ATP synthase F1 subunit beta IEP RGD PMID:21563808 RGD:5147909 NCBI chr 7:1,100,058...1,106,461
Ensembl chr 7:515,460...567,273 		JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 IEP RGD PMID:9163327 RGD:13799276 NCBI chr10:81,520,762...81,523,735
Ensembl chr10:81,023,925...81,027,124
Ensembl chr10:81,023,925...81,027,124 		JBrowse link
G Atp5mc2 ATP synthase membrane subunit c locus 2 IEP RGD PMID:9163327 RGD:13799276 NCBI chr 7:135,669,847...135,680,839
Ensembl chr 7:133,791,342...133,799,733 		JBrowse link
G Timm23 translocase of inner mitochondrial membrane 23 IEP RGD PMID:12388124 RGD:13463596 NCBI chr16:7,410,308...7,436,392
Ensembl chr16:7,409,688...7,436,379
Ensembl chr 3:7,409,688...7,436,379
Ensembl chr 6:7,409,688...7,436,379 		JBrowse link
G Timm44 translocase of inner mitochondrial membrane 44 IEP RGD PMID:12388124 RGD:13463596 NCBI chr12:2,612,581...2,629,374
Ensembl chr12:2,612,581...2,629,351 		JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:15019085 RGD:14995431 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Tomm20 translocase of outer mitochondrial membrane 20 IEP RGD PMID:9843712 RGD:13464125 NCBI chr19:71,822,429...71,832,420
Ensembl chr19:54,923,402...54,935,198 		JBrowse link
response to amino acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase IEP S-adenosyl-L-methionine RGD PMID:8295845 RGD:4144812 NCBI chr 5:75,961,993...75,972,334
Ensembl chr 5:75,961,993...75,972,474 		JBrowse link
G Aldob aldolase, fructose-bisphosphate B IEP arginine RGD PMID:2984252 RGD:2313437 NCBI chr 5:68,684,541...68,697,582
Ensembl chr 5:63,889,046...63,902,116 		JBrowse link
G Arg1 arginase 1 IEP N-acetylcysteine RGD PMID:15458774 RGD:4143261 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422 		JBrowse link
G Arg2 arginase 2 IEP N-acetylcysteine RGD PMID:15458774 RGD:4143261 NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378 		JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) IEP RGD PMID:9176161 RGD:2307260 NCBI chr 4:35,784,995...35,803,474
Ensembl chr 4:35,785,237...35,803,423 		JBrowse link
G Ass1 argininosuccinate synthase 1 IEP citrulline RGD PMID:17938381 RGD:4140474 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903 		JBrowse link
G Atp6v0e1 ATPase H+ transporting V0 subunit e1 IEP RGD PMID:11162653 RGD:632233 NCBI chr10:16,984,084...17,007,156
Ensembl chr10:16,479,567...16,524,434 		JBrowse link
G Bad BCL2-associated agonist of cell death IEP RGD PMID:17967733 RGD:2292684 NCBI chr 1:213,562,719...213,572,034
Ensembl chr 1:204,131,501...204,142,823 		JBrowse link
G Casp3 caspase 3 IEP RGD PMID:18423997 RGD:2293318 NCBI chr16:52,395,539...52,413,794
Ensembl chr16:45,662,910...45,684,648 		JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP RGD PMID:18475188 RGD:2307016 NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,005,424...67,007,226 		JBrowse link
G Ccn2 cellular communication network factor 2 IEP N-acetylcysteine RGD PMID:17250813 RGD:1625511 NCBI chr 1:22,621,498...22,624,614
Ensembl chr 1:20,802,199...20,805,734 		JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B IEP RGD PMID:16824045 RGD:2293618 NCBI chr 4:169,491,273...169,496,500
Ensembl chr 4:167,760,181...167,764,982 		JBrowse link
G Cdo1 cysteine dioxygenase type 1 IDA RGD PMID:11287364 RGD:2301359 NCBI chr18:39,432,473...39,447,253
Ensembl chr18:39,432,474...39,447,296 		JBrowse link
G Cfl1 cofilin 1 acts_upstream_of_or_within ISO
IEA 		(PMID:17018287)
GO_REF:0000107 		RGD
Ensembl		 PMID:17018287 GO_REF:0000107 NCBI chr 1:212,227,124...212,230,656
Ensembl chr 1:202,786,627...202,817,587 		JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex IEP RGD PMID:17543437 RGD:2298659 NCBI chr 1:252,908,748...252,944,273
Ensembl chr 1:242,959,760...242,995,065 		JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP L-arginine plus N-carbamoyl-L-glutamate RGD PMID:11738098 RGD:4144101 NCBI chr 9:68,614,153...68,737,037
Ensembl chr 9:68,614,153...68,737,033 		JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP kainic acid RGD PMID:18040670 RGD:4831841 NCBI chr 8:67,318,665...67,330,196
Ensembl chr 8:58,404,669...58,434,338 		JBrowse link
G Drd1 dopamine receptor D1 IEP L-carnitine RGD PMID:17052844 RGD:7248698 NCBI chr17:10,545,488...10,550,029
Ensembl chr17:10,540,558...10,545,002 		JBrowse link
G Edn1 endothelin 1 IEP methionine-rich diet RGD PMID:20871618 RGD:4144131 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Gip gastric inhibitory polypeptide IEP intragastric tryptophan RGD PMID:6376308 RGD:2312545 NCBI chr10:80,968,360...80,976,506
Ensembl chr10:80,968,352...80,976,503 		JBrowse link
G Glra4 glycine receptor alpha 4 involved_in ISO
IEA 		(PMID:10762330)
GO_REF:0000107 		RGD
Ensembl		 PMID:10762330 GO_REF:0000107 NCBI chr  X:100,110,517...100,131,042
Ensembl chr  X:100,110,517...100,131,042 		JBrowse link
G Gprc6a G protein-coupled receptor, class C, group 6, member A involved_in ISO
IEA 		(PMID:17478059)
GO_REF:0000107 		RGD
Ensembl		 PMID:17478059 GO_REF:0000107 NCBI chr20:30,922,106...30,943,412
Ensembl chr20:30,922,106...30,943,412 		JBrowse link
G Gss glutathione synthetase IEP RGD PMID:19212806 RGD:2307430 NCBI chr 3:144,047,849...144,078,197
Ensembl chr 3:144,047,850...144,078,198 		JBrowse link
G Gstm1 glutathione S-transferase mu 1 IEP RGD PMID:11040448 RGD:2293820 NCBI chr 2:195,649,845...195,655,402
Ensembl chr 2:195,649,845...195,655,411 		JBrowse link
G Gstp1 glutathione S-transferase pi 1 IEP RGD PMID:20013880 RGD:2317858 NCBI chr 1:210,767,237...210,770,242
Ensembl chr 1:201,321,672...201,340,226 		JBrowse link
G Hmbs hydroxymethylbilane synthase IEP S-adenosyl-L-methionine RGD PMID:8295845 RGD:4144812 NCBI chr 8:44,673,554...44,680,950
Ensembl chr 8:44,673,554...44,680,957 		JBrowse link
G Hsf1 heat shock transcription factor 1 IEP L-alanine and L-glutamine RGD PMID:25202991 RGD:10402543 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:108,196,056...108,223,011 		JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP glutamine RGD PMID:20599905 RGD:4145385 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:19,553,645...19,565,438 		JBrowse link
G Il17a interleukin 17A IEP arginine RGD PMID:22673595 RGD:9109565 NCBI chr 9:30,640,844...30,644,331
Ensembl chr 9:23,144,402...23,147,889 		JBrowse link
G Il6 interleukin 6 IEP N-acetylcysteine RGD PMID:19344884 RGD:2306934 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Lipc lipase C, hepatic type IEP L-arginine RGD PMID:19212806 RGD:2307430 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase IEP PubChem_Compound: 6047 RGD PMID:16529858 RGD:1581410 NCBI chr 5:21,437,127...21,553,097
Ensembl chr 5:16,639,466...16,756,868 		JBrowse link
G Meak7 MTOR associated protein, eak-7 homolog involved_in ISO (PMID:29750193) RGD PMID:29750193 NCBI chr19:47,813,899...47,836,830
Ensembl chr19:47,811,416...47,841,278 		JBrowse link
G Mmp3 matrix metallopeptidase 3 IEP RGD PMID:17083784 RGD:2290426 NCBI chr 8:12,925,267...12,938,828
Ensembl chr 8:4,640,416...4,653,961 		JBrowse link
G Msh2 mutS homolog 2 IEP RGD PMID:11026496 RGD:2293525 NCBI chr 6:12,567,368...12,626,534
Ensembl chr 6:6,813,795...6,872,938 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase IEP methionine RGD PMID:737254 RGD:6893691 NCBI chr 5:163,748,346...163,768,141
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:18497260)
GO_REF:0000107
(PMID:15467718) 		RGD
Ensembl		 PMID:15467718 PMID:18497260 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor IEP S-ADENOSYLMETHIONINE�� RGD PMID:21276439 RGD:150540306 NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:119,074,437...119,079,415 		JBrowse link
G Naip6 NLR family, apoptosis inhibitory protein 6 IEP kainic acid RGD PMID:12547647 RGD:634756 NCBI chr 2:31,507,423...31,559,098
Ensembl chr 2:31,507,424...31,570,542 		JBrowse link
G Nos3 nitric oxide synthase 3 IEP RGD PMID:17535904 RGD:2292139 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase IEP RGD PMID:16391469 RGD:1642371 NCBI chr10:45,275,434...45,349,651
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 IEP arginine RGD PMID:19106217 RGD:4108480 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IEP kainic acid RGD PMID:17443789 RGD:9999366 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083 		JBrowse link
G Prkcd protein kinase C, delta IEP RGD PMID:17210758 RGD:1642543 NCBI chr16:5,775,681...5,806,122
Ensembl chr16:5,769,215...5,799,352 		JBrowse link
G Ptger4 prostaglandin E receptor 4 IEP rebamipide; with water-immersion restraint stress RGD PMID:10882227 RGD:10003083 NCBI chr 2:56,061,699...56,074,594
Ensembl chr 2:54,335,424...54,346,670 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit IEP RGD PMID:18288455 RGD:2298787 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:202,924,945...202,935,484 		JBrowse link
G Reln reelin IEP methyl donor L-methionine RGD PMID:16484373 RGD:2317797 NCBI chr 4:13,628,440...14,055,201
Ensembl chr 4:12,736,130...13,162,211 		JBrowse link
G Rhoa ras homolog family member A IEP RGD PMID:17515837 RGD:1642955 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 IEP RGD PMID:10913029 RGD:1642983 NCBI chr10:71,817,794...71,865,211
Ensembl chr10:71,323,777...71,367,908 		JBrowse link
G Rraga Ras-related GTP binding A involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:101,113,341...101,114,936
Ensembl chr 5:101,112,859...101,114,510 		JBrowse link
G Rragc Ras-related GTP binding C involved_in ISO (PMID:27222292) RGD PMID:27222292 NCBI chr 5:136,148,239...136,167,773
Ensembl chr 5:136,148,276...136,167,767 		JBrowse link
G Sds serine dehydratase IEP RGD PMID:18584286 RGD:2311255 NCBI chr12:36,083,226...36,090,540
Ensembl chr12:36,083,229...36,088,203 		JBrowse link
G Slc1a2 solute carrier family 1 member 2 acts_upstream_of_or_within ISO
IEA 		MGI:2449707 (PMID:9180080)
GO_REF:0000107 		RGD
Ensembl		 PMID:9180080 GO_REF:0000107 NCBI chr 3:109,460,109...109,590,445
Ensembl chr 3:89,005,129...89,126,498 		JBrowse link
G Sst somatostatin IEP RGD PMID:17961553 RGD:2303188 NCBI chr11:90,461,546...90,462,823
Ensembl chr11:76,956,896...76,958,173 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 IEP RGD PMID:17083784 RGD:2290426 NCBI chr 7:19,408,539...19,459,558
Ensembl chr 7:17,521,919...17,571,839 		JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A IEP S-propargyl-cysteine RGD PMID:20828607 RGD:5130959 NCBI chr 4:159,837,119...159,849,817
Ensembl chr 4:158,150,820...158,163,591 		JBrowse link
G Tp53 tumor protein p53 IEP RGD PMID:17542038 RGD:2290575 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
response to glycine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 involved_in ISO (PMID:28105280) RGD PMID:28105280 NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:8,103,680...8,130,603 		JBrowse link
response to hydrostatic pressure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO
IEA 		(PMID:19287093)
GO_REF:0000107 		RGD
Ensembl		 PMID:19287093 GO_REF:0000107 NCBI chr13:47,708,157...47,807,389
Ensembl chr13:45,156,146...45,255,246 		JBrowse link
G Col18a1 collagen type XVIII alpha 1 chain IEP RGD PMID:12798059 RGD:1600908 NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593 		JBrowse link
G Krt8 keratin 8 IDA RGD PMID:15972820 RGD:1581601 NCBI chr 7:133,124,203...133,131,656
Ensembl chr 7:133,124,203...133,131,728 		JBrowse link
G Lrrc25 leucine rich repeat containing 25 acts_upstream_of_or_within ISO (PMID:30340835) RGD PMID:30340835 NCBI chr16:18,806,888...18,813,723
Ensembl chr16:18,806,890...18,813,671 		JBrowse link
G Ntrk1 neurotrophic receptor tyrosine kinase 1 IEP RGD PMID:18817846 RGD:5684379 NCBI chr 2:175,534,844...175,551,664
Ensembl chr 2:173,236,963...173,253,770 		JBrowse link
response to kainic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 IEP RGD PMID:8300854 RGD:2306958 NCBI chr 1:227,287,713...227,306,739
Ensembl chr 1:217,861,175...217,877,343 		JBrowse link
G Casp12 caspase 12 IEP RGD PMID:17251432 RGD:10755427 NCBI chr 8:10,927,188...10,954,442
Ensembl chr 8:2,642,434...2,674,037 		JBrowse link
G Ctsb cathepsin B IEP kainic acid RGD PMID:18094625 RGD:2315514 NCBI chr15:41,565,607...41,586,479
Ensembl chr15:37,389,629...37,410,500 		JBrowse link
G Ddit3 DNA-damage inducible transcript 3 IEP RGD PMID:17251432 RGD:10755427 NCBI chr 7:65,001,695...65,006,517
Ensembl chr 7:63,116,380...63,121,201 		JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha IEP RGD PMID:17251432 RGD:10755427 NCBI chr 6:103,405,880...103,430,549
Ensembl chr 6:97,672,766...97,706,225 		JBrowse link
G Gdf10 growth differentiation factor 10 IEP RGD PMID:17251432 RGD:10755427 NCBI chr16:9,237,182...9,250,537
Ensembl chr16:9,237,261...9,249,343 		JBrowse link
G Ireb2 iron responsive element binding protein 2 IEP RGD PMID:16328268 RGD:12904043 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611 		JBrowse link
G Kcnc2 potassium voltage-gated channel subfamily C member 2 IEP RGD PMID:7643197 RGD:9686052 NCBI chr 7:47,700,035...47,883,979
Ensembl chr 7:47,700,288...47,883,968 		JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:26004810 RGD:126790532 NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095 		JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IEP RGD PMID:17443789 RGD:9999366 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083 		JBrowse link
G Ptn pleiotrophin IEP RGD PMID:7477935 RGD:10043834 NCBI chr 4:66,260,764...66,342,614
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Sirt1 sirtuin 1 IEP RGD PMID:18538940 RGD:9586004 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Slc6a12 solute carrier family 6 member 12 IEP RGD PMID:15248296 RGD:1643206 NCBI chr 4:154,585,386...154,603,750
Ensembl chr 4:154,585,500...154,603,750 		JBrowse link
response to L-arginine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IEP RGD PMID:22623885 RGD:152995397 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:152,398,747...152,447,088 		JBrowse link
G Dhodh dihydroorotate dehydrogenase IEP RGD PMID:6167833 RGD:11040444 NCBI chr19:37,551,858...37,573,327
Ensembl chr19:37,558,177...37,591,654 		JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:12615083 RGD:9685475 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317 		JBrowse link
G Gcg glucagon IEP RGD PMID:2182011 RGD:10402368 NCBI chr 3:67,522,489...67,531,533
Ensembl chr 3:47,113,914...47,122,929 		JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:28483572 RGD:12910731 NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342 		JBrowse link
G Nos3 nitric oxide synthase 3 IEP RGD PMID:28966130 RGD:13450941 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:10,793,834...10,814,166 		JBrowse link
response to L-cysteine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gmps guanine monophosphate synthase IDA RGD PMID:2347042 RGD:5147428 NCBI chr 2:148,441,369...148,491,908
Ensembl chr 2:148,435,643...148,485,875 		JBrowse link
response to L-glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:15234189 RGD:8657339 NCBI chr 4:26,312,403...26,488,456
Ensembl chr 4:25,158,362...25,442,709 		JBrowse link
G Aifm1 apoptosis inducing factor, mitochondria associated 1 IEP RGD PMID:16776830 RGD:10053566 NCBI chr  X:132,528,107...132,567,237
Ensembl chr  X:127,650,226...127,689,256 		JBrowse link
G Bdnf brain-derived neurotrophic factor IEP RGD PMID:12654519 RGD:8655631 NCBI chr 3:116,619,633...116,670,212
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 IEP RGD PMID:19365572 RGD:10059410 NCBI chr 9:73,397,333...73,466,339
Ensembl chr 9:65,903,547...65,970,816 		JBrowse link
G Ghsr growth hormone secretagogue receptor IEP RGD PMID:10718930 RGD:12910114 NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:110,268,489...110,271,865 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IEP RGD PMID:18445133 RGD:10045541 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hcn1 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1 IEP RGD PMID:20215108 RGD:9686144 NCBI chr 2:49,495,771...49,899,983
Ensembl chr 2:49,495,771...49,899,774 		JBrowse link
G Hpca hippocalcin IEP RGD PMID:20704590 RGD:9686447 NCBI chr 5:141,455,616...141,466,252
Ensembl chr 5:141,455,613...141,463,841 		JBrowse link
G Igf1r insulin-like growth factor 1 receptor IDA RGD PMID:18981172 RGD:2311508 NCBI chr 1:130,959,787...131,248,664
Ensembl chr 1:121,550,743...121,831,777 		JBrowse link
G Kcnb1 potassium voltage-gated channel subfamily B member 1 IEP RGD PMID:24355600 RGD:126908004 NCBI chr 3:155,820,255...155,913,383
Ensembl chr 3:155,822,963...155,916,194 		JBrowse link
G Pcna proliferating cell nuclear antigen IEP RGD PMID:12917765 RGD:10448973 NCBI chr 3:139,951,948...139,955,820
Ensembl chr 3:119,498,810...119,502,995 		JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 IEP RGD PMID:14525909 RGD:11038810 NCBI chr 1:249,057,324...249,279,703
Ensembl chr 1:239,108,777...239,330,169 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 IEP RGD PMID:15066269 RGD:9681727 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769 		JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in ISO (PMID:21075086) RGD PMID:21075086 NCBI chr 7:130,527,313...130,542,567
Ensembl chr 7:130,527,316...130,543,633 		JBrowse link
G Tnf tumor necrosis factor IDA positive regulation of neurotoxicity RGD PMID:15713255 RGD:1580210 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Tuba1a tubulin, alpha 1A involved_in ISO (PMID:20037577) RGD PMID:20037577 NCBI chr 7:130,113,214...130,116,880
Ensembl chr 7:130,081,032...130,196,186 		JBrowse link
G Ufl1 Ufm1-specific ligase 1 acts_upstream_of_or_within ISO
IEA 		(PMID:20531390)
GO_REF:0000107 		RGD
Ensembl		 PMID:20531390 GO_REF:0000107 NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199 		JBrowse link
response to L-glutamine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nqo1 NAD(P)H quinone dehydrogenase 1 IDA RGD PMID:30967905 RGD:25823188 NCBI chr19:52,205,374...52,220,267
Ensembl chr19:35,295,573...35,310,557 		JBrowse link
response to L-leucine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdx1 pancreatic and duodenal homeobox 1 IEP RGD PMID:19438972 RGD:2311161 NCBI chr12:7,757,865...7,763,064
Ensembl chr12:7,757,865...7,763,064 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 IEP RGD PMID:19015198 RGD:2303128 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha IEP RGD PMID:24124592 RGD:10045951 NCBI chr 2:117,103,643...117,177,411
Ensembl chr 2:115,174,984...115,249,032 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:22612562 RGD:7242173 NCBI chr14:63,073,505...63,729,215
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 IEP RGD PMID:16616211 RGD:1643098 NCBI chr10:71,817,794...71,865,211
Ensembl chr10:71,323,777...71,367,908 		JBrowse link
response to methionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf21 fibroblast growth factor 21 IEP RGD PMID:23052097 RGD:10401915 NCBI chr 1:105,219,825...105,221,376
Ensembl chr 1:96,083,441...96,090,454 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 IEP RGD PMID:23052097 RGD:10401915 NCBI chr 3:182,348,572...182,354,521
Ensembl chr 3:161,930,256...161,936,191 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17716000 RGD:10059676 NCBI chr14:63,073,505...63,729,215
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Slco1b2 solute carrier organic anion transporter family member 1B2 acts_upstream_of_or_within ISO (PMID:24613363) RGD PMID:24613363 NCBI chr 4:174,551,463...174,619,988
Ensembl chr 4:174,551,480...174,619,981 		JBrowse link
response to proline term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:17407768 RGD:9685489 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317 		JBrowse link
response to thyroxine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:22339773 RGD:8657338 NCBI chr 4:26,312,403...26,488,456
Ensembl chr 4:25,158,362...25,442,709 		JBrowse link
G Crls1 cardiolipin synthase 1 IDA RGD PMID:1659453 RGD:11565114 NCBI chr 3:140,572,680...140,591,543
Ensembl chr 3:120,119,852...120,138,655 		JBrowse link
G F2 coagulation factor II, thrombin IEP RGD PMID:18336749 RGD:2312311 NCBI chr 3:98,051,958...98,065,246
Ensembl chr 3:77,596,198...77,609,486 		JBrowse link
G F7 coagulation factor VII IEP RGD PMID:21382270 RGD:11049513 NCBI chr16:83,191,896...83,202,775
Ensembl chr16:76,489,717...76,500,610 		JBrowse link
G Hspa9 heat shock protein family A (Hsp70) member 9 IEP RGD PMID:21563808 RGD:5147909 NCBI chr18:26,810,004...26,832,958
Ensembl chr18:26,535,798...26,554,292 		JBrowse link
G Nat1 N-acetyltransferase 1 IEP RGD PMID:9916872 RGD:5131598 NCBI chr16:26,984,882...27,005,194
Ensembl chr16:22,208,194...22,238,520 		JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 IEP RGD PMID:10582581 RGD:11522362 NCBI chr11:43,378,719...43,417,166
Ensembl chr11:43,377,216...43,417,202 		JBrowse link
G Txn1 thioredoxin 1 IEP RGD PMID:20729758 RGD:5133711 NCBI chr 5:77,507,455...77,519,685
Ensembl chr 5:72,711,933...72,724,629 		JBrowse link
response to water term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel involved_in ISO
IEA 		(PMID:28553944)
GO_REF:0000107 		RGD
Ensembl		 PMID:28553944 GO_REF:0000107 NCBI chr 1:243,032,891...243,070,031
Ensembl chr 1:243,032,913...243,070,031 		JBrowse link
response to water deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp11 LDL receptor related protein 11 involved_in ISO
IEA 		(PMID:25262641)
GO_REF:0000107 		RGD
Ensembl		 PMID:25262641 GO_REF:0000107 NCBI chr 1:3,868,665...3,928,513
Ensembl chr 1:2,079,438...2,108,110 		JBrowse link
G Umod uromodulin acts_upstream_of_or_within ISO
IEA 		(PMID:15522986)
GO_REF:0000107 		RGD
Ensembl		 PMID:15522986 GO_REF:0000107 NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    response to stimulus 11082
      response to chemical 5966
        response to acid chemical 315
          cellular response to acid chemical + 206
          response to amino acid + 295
          response to water + 20
          stress response to acid chemical + 3
paths to the root