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ONTOLOGY REPORT - ANNOTATIONS


Term:RNA polymerase II proximal promoter sequence-specific DNA binding
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Accession:GO:0000978 term browser browse the term
Definition:Interacting selectively and non-covalently with a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in the proximal promoter of a gene transcribed by RNA polymerase II. The proximal promoter is in cis with and relatively close to the core promoter.
Comment:Note that the phrase "upstream activating sequence", or UAS is often used in S. cerevisiae literature to refer to regulatory sequences that occur in the region upstream and proximal to the core promoter. In contrast, in bacteria such as E. coli, the phrase "upstream activating sequence", or UAS is a synonym for "enhancer".
Synonyms:exact_synonym: RNA polymerase II core promoter proximal region sequence-specific DNA binding;   RNA polymerase II promoter proximal region sequence-specific DNA binding
 related_synonym: RNA polymerase II upstream activating sequence (UAS) sequence-specific DNA binding


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RNA polymerase II proximal promoter sequence-specific DNA binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aebp2 AE binding protein 2 JBrowse link 4 174,799,378 174,863,260 RGD:1624291
G Ago1 argonaute RISC component 1 JBrowse link 5 144,444,390 144,479,430 RGD:1624291
RGD:1600115
G Akna AT-hook transcription factor JBrowse link 5 79,184,087 79,232,370 RGD:1624291
RGD:1600115
G Aknad1 AKNA domain containing 1 JBrowse link 2 211,541,800 211,585,332 RGD:1600115
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:1624291
G Ar androgen receptor JBrowse link X 67,656,253 67,828,998 RGD:1624291
RGD:1600115
G Arid3b AT-rich interaction domain 3B JBrowse link 8 62,569,601 62,616,837 RGD:1624291
RGD:1600115
G Arid3c AT-rich interaction domain 3C JBrowse link 5 58,107,182 58,114,632 RGD:1624291
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 JBrowse link 1 146,399,217 146,556,437 RGD:1624291
RGD:1600115
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 1 178,039,002 178,137,469 RGD:1624291
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 JBrowse link 4 181,103,774 181,158,415 RGD:1624291
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 7 28,038,662 28,040,504 RGD:1624291
G Ascl2 achaete-scute family bHLH transcription factor 2 JBrowse link 1 216,154,002 216,156,409 RGD:1624291
G Atf3 activating transcription factor 3 JBrowse link 13 109,817,892 109,849,632 RGD:1624291
RGD:13792537
G Atf4 activating transcription factor 4 JBrowse link 7 121,480,723 121,482,781 RGD:1600115
RGD:1624291
G Atf6 activating transcription factor 6 JBrowse link 13 89,053,457 89,242,531 RGD:1624291
G Atf7 activating transcription factor 7 JBrowse link 7 144,131,382 144,223,463 RGD:1624291
G Atoh1 atonal bHLH transcription factor 1 JBrowse link 4 95,498,003 95,500,098 RGD:1624291
RGD:1600115
G Batf basic leucine zipper ATF-like transcription factor JBrowse link 6 109,562,415 109,584,541 RGD:1624291
RGD:13792537
G Batf2 basic leucine zipper ATF-like transcription factor 2 JBrowse link 1 221,538,006 221,546,650 RGD:13792537
G Batf3 basic leucine zipper ATF-like transcription factor 3 JBrowse link 13 109,713,376 109,726,438 RGD:1624291
RGD:13792537
RGD:1600115
G Bcl11a BAF chromatin remodeling complex subunit BCL11A JBrowse link 14 108,826,717 108,921,197 RGD:1624291
RGD:1600115
G Bcl11b BAF chromatin remodeling complex subunit BCL11B JBrowse link 6 131,834,097 131,927,251 RGD:1624291
RGD:1600115
G Bcl3 BCL3, transcription coactivator JBrowse link 1 80,730,758 80,745,273 RGD:1624291
G Bcl6 BCL6, transcription repressor JBrowse link 11 80,255,790 80,279,075 RGD:1624291
G Bhlhe40 basic helix-loop-helix family, member e40 JBrowse link 4 140,703,619 140,709,319 RGD:1624291
G Bhlhe41 basic helix-loop-helix family, member e41 JBrowse link 4 180,230,742 180,235,138 RGD:1624291
G Bmi1 BMI1 proto-oncogene, polycomb ring finger JBrowse link 17 85,360,439 85,370,283 RGD:1624291
RGD:1600115
G Bsx brain specific homeobox JBrowse link 8 45,061,670 45,065,430 RGD:1624291
RGD:13792537
G Carf calcium responsive transcription factor JBrowse link 9 66,878,526 66,928,658 RGD:1624291
RGD:1600115
G Cc2d1a coiled-coil and C2 domain containing 1A JBrowse link 19 25,246,912 25,261,965 RGD:1624291
RGD:1600115
G Cc2d1b coiled-coil and C2 domain containing 1B JBrowse link 5 128,215,711 128,229,762 RGD:1624291
RGD:1600115
G Cdk9 cyclin-dependent kinase 9 JBrowse link 3 11,742,269 11,747,117 RGD:1624291
RGD:1600115
G Cdx4 caudal type homeo box 4 JBrowse link X 74,165,172 74,173,758 RGD:1624291
RGD:1600115
G Cebpa CCAAT/enhancer binding protein alpha JBrowse link 1 91,363,492 91,366,164 RGD:8661634
RGD:1600115
RGD:1624291
G Cebpb CCAAT/enhancer binding protein beta JBrowse link 3 164,424,502 164,425,933 RGD:8661634
RGD:1624291
G Cebpd CCAAT/enhancer binding protein delta JBrowse link 11 89,008,008 89,009,146 RGD:8661634
RGD:1624291
G Cebpe CCAAT/enhancer binding protein epsilon JBrowse link 15 33,356,119 33,357,517 RGD:1624291
RGD:1600115
G Cebpg CCAAT/enhancer binding protein gamma JBrowse link 1 91,286,956 91,297,459 RGD:1624291
G Cebpz CCAAT/enhancer binding protein zeta JBrowse link 6 1,516,804 1,534,488 RGD:1624291
RGD:1600115
G Chd2 chromodomain helicase DNA binding protein 2 JBrowse link 1 134,757,934 134,873,053 RGD:1600115
RGD:1624291
G Chd7 chromodomain helicase DNA binding protein 7 JBrowse link 5 21,769,087 21,952,036 RGD:1624291
RGD:1600115
G Clock clock circadian regulator JBrowse link 14 34,418,226 34,502,218 RGD:1624291
G Creb1 cAMP responsive element binding protein 1 JBrowse link 9 71,229,753 71,298,994 RGD:1624291
G Creb3 cAMP responsive element binding protein 3 JBrowse link 5 59,063,532 59,068,196 RGD:1624291
G Creb3l2 cAMP responsive element binding protein 3-like 2 JBrowse link 4 64,869,285 64,981,519 RGD:1624291
G Crem cAMP responsive element modulator JBrowse link 17 57,021,704 57,090,888 RGD:1624291
G Crx cone-rod homeobox JBrowse link 1 77,744,593 77,758,913 RGD:1624291
G Ctcf CCCTC-binding factor JBrowse link 19 37,600,151 37,649,674 RGD:1624291
RGD:1600115
G Ctcfl CCCTC-binding factor like JBrowse link 3 171,145,203 171,168,375 RGD:1624291
RGD:1600115
G Cux2 cut-like homeobox 2 JBrowse link 12 40,016,774 40,221,067 RGD:1624291
RGD:1600115
G Cys1 cystin 1 JBrowse link 6 43,844,937 43,862,131 RGD:1624291
G Dach1 dachshund family transcription factor 1 JBrowse link 15 82,095,003 82,482,272 RGD:1600115
RGD:1624291
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 7 70,578,564 70,585,074 RGD:1624291
RGD:13792537
RGD:1600115
G Ddn dendrin JBrowse link 7 140,479,707 140,486,093 RGD:8554331
RGD:13792537
G Dhx36 DEAH-box helicase 36 JBrowse link 2 152,785,844 152,824,549 RGD:1600115
RGD:1624291
G Dhx9 DExH-box helicase 9 JBrowse link 13 70,885,503 70,922,278 RGD:1600115
RGD:1624291
G Dlx2 distal-less homeobox 2 JBrowse link 3 58,180,088 58,181,971 RGD:13792537
G Dlx3 distal-less homeobox 3 JBrowse link 10 82,937,971 82,943,367 RGD:13792537
G Dlx4 distal-less homeobox 4 JBrowse link 10 82,958,525 82,963,919 RGD:1624291
RGD:13792537
G Dlx5 distal-less homeobox 5 JBrowse link 4 32,387,741 32,392,085 RGD:1624291
RGD:13792537
RGD:1600115
G Dmtf1 cyclin D binding myb-like transcription factor 1 JBrowse link 4 21,862,297 21,902,798 RGD:1624291
RGD:13792537
G Dnmt3a DNA methyltransferase 3 alpha JBrowse link 6 28,205,375 28,346,052 RGD:1600115
RGD:1624291
G Dux4 double homeobox 4 JBrowse link 16 3,754,968 3,766,532 RGD:1624291
G E2f4 E2F transcription factor 4 JBrowse link 19 37,252,828 37,260,239 RGD:1624291
RGD:1600115
G E2f7 E2F transcription factor 7 JBrowse link 7 53,275,659 53,318,261 RGD:1600115
RGD:1624291
G E2f8 E2F transcription factor 8 JBrowse link 1 104,185,436 104,203,683 RGD:1624291
RGD:1600115
G Ebf1 EBF transcription factor 1 JBrowse link 10 23,654,849 24,051,627 RGD:1624291
G Ebf2 EBF transcription factor 2 JBrowse link 15 43,905,099 44,103,742 RGD:1624291
RGD:1600115
G Ebf3 EBF transcription factor 3 JBrowse link 1 209,523,153 209,641,143 RGD:1624291
RGD:1600115
G Eed embryonic ectoderm development JBrowse link 1 154,189,252 154,216,340 RGD:1624291
RGD:1600115
G Egr2 early growth response 2 JBrowse link 20 22,452,170 22,461,018 RGD:1624291
RGD:1600115
G Ehf ets homologous factor JBrowse link 3 93,176,257 93,216,484 RGD:1624291
RGD:1600115
G Elf1 E74 like ETS transcription factor 1 JBrowse link 15 61,772,544 61,868,442 RGD:1624291
RGD:1600115
G Elf3 E74 like ETS transcription factor 3 JBrowse link 13 52,083,873 52,088,798 RGD:1624291
RGD:1600115
G Elf4 E74 like ETS transcription factor 4 JBrowse link X 135,239,626 135,284,330 RGD:1624291
RGD:1600115
G Elk1 ETS transcription factor ELK1 JBrowse link X 1,287,875 1,304,822 RGD:628487
RGD:1624291
G Elk3 ETS transcription factor ELK3 JBrowse link 7 34,086,213 34,149,601 RGD:1624291
RGD:1600115
G Elk4 ETS transcription factor ELK4 JBrowse link 13 48,788,262 48,813,267 RGD:1624291
RGD:1600115
G Emx1 empty spiracles homeobox 1 JBrowse link 4 116,967,646 116,984,136 RGD:13792537
G Emx2 empty spiracles homeobox 2 JBrowse link 1 280,633,938 280,640,946 RGD:13792537
G En1 engrailed homeobox 1 JBrowse link 13 36,532,758 36,537,888 RGD:1624291
RGD:1600115
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:1581923
RGD:1624291
RGD:5128544
G Erg ETS transcription factor ERG JBrowse link 11 35,645,317 35,749,637 RGD:1624291
RGD:1600115
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:1624291
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:8661629
RGD:1624291
G Esrra estrogen related receptor, alpha JBrowse link 1 222,168,729 222,178,842 RGD:1624291
RGD:1600115
G Esrrb estrogen-related receptor beta JBrowse link 6 110,360,940 110,458,406 RGD:1600115
RGD:1624291
G Ets1 ETS proto-oncogene 1, transcription factor JBrowse link 8 33,756,634 33,879,625 RGD:1624291
RGD:1600115
G Ets2 ETS proto-oncogene 2, transcription factor JBrowse link 11 36,075,709 36,092,495 RGD:1624291
RGD:1600115
G Etv1 ETS variant transcription factor 1 JBrowse link 6 58,467,215 58,558,640 RGD:1624291
RGD:1600115
G Etv2 ETS variant transcription factor 2 JBrowse link 1 89,091,239 89,094,570 RGD:1624291
RGD:1600115
G Etv4 ETS variant transcription factor 4 JBrowse link 10 89,685,058 89,700,300 RGD:1624291
RGD:1600115
G Etv6 ETS variant transcription factor 6 JBrowse link 4 167,754,684 167,992,370 RGD:1624291
RGD:1600115
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link 4 77,284,404 77,347,011 RGD:1600115
RGD:1624291
G Fev FEV transcription factor, ETS family member JBrowse link 9 82,142,981 82,146,855 RGD:633697
G Fezf1 Fez family zinc finger 1 JBrowse link 4 50,309,281 50,312,608 RGD:1624291
RGD:1600115
G Fezf2 Fez family zinc finger 2 JBrowse link 15 12,825,333 12,831,496 RGD:1624291
RGD:1600115
G Figla folliculogenesis specific bHLH transcription factor JBrowse link 4 117,679,256 117,683,618 RGD:1624291
RGD:1600115
G Fli1 Fli-1 proto-oncogene, ETS transcription factor JBrowse link 8 33,541,932 33,661,111 RGD:1624291
RGD:1600115
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:1624291
RGD:13792537
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 80,214,691 80,221,417 RGD:1624291
RGD:13792537
G Fosl1 FOS like 1, AP-1 transcription factor subunit JBrowse link 1 220,826,560 220,835,066 RGD:629541
RGD:13792537
RGD:1624291
G Fosl2 FOS like 2, AP-1 transcription factor subunit JBrowse link 6 25,598,936 25,616,995 RGD:13792537
G Foxa1 forkhead box A1 JBrowse link 6 78,516,579 78,549,669 RGD:1624291
G Foxa2 forkhead box A2 JBrowse link 3 142,383,084 142,387,493 RGD:1624291
RGD:1600115
RGD:8553707
G Foxc2 forkhead box C2 JBrowse link 19 53,044,379 53,047,081 RGD:1624291
RGD:1600115
G Foxd1 forkhead box D1 JBrowse link 2 28,460,068 28,462,488 RGD:1624291
RGD:1600115
G Foxi1 forkhead box I1 JBrowse link 10 19,160,566 19,164,505 RGD:1624291
RGD:1600115
G Foxj1 forkhead box J1 JBrowse link 10 105,282,090 105,289,396 RGD:1624291
G Foxj2 forkhead box J2 JBrowse link 4 155,653,446 155,679,815 RGD:1624291
RGD:13792537
G Foxj3 forkhead box J3 JBrowse link 5 138,587,968 138,676,948 RGD:13792537
G Foxk2 forkhead box K2 JBrowse link 10 110,468,905 110,518,854 RGD:1624291
RGD:1600115
G Foxl2 forkhead box L2 JBrowse link 8 107,194,492 107,197,644 RGD:1624291
RGD:1600115
G Foxo3 forkhead box O3 JBrowse link 20 46,428,078 46,519,156 RGD:1600115
RGD:1624291
G Foxp1 forkhead box P1 JBrowse link 4 131,362,178 131,963,466 RGD:1624291
RGD:1600115
G Foxp2 forkhead box P2 JBrowse link 4 41,364,441 41,944,685 RGD:1624291
RGD:1600115
G Foxp3 forkhead box P3 JBrowse link X 15,753,175 15,768,648 RGD:1600115
RGD:1624291
G Foxp4 forkhead box P4 JBrowse link 9 15,068,378 15,124,962 RGD:1624291
G Foxq1 forkhead box Q1 JBrowse link 17 34,224,308 34,226,941 RGD:1624291
G Foxs1 forkhead box S1 JBrowse link 3 148,406,509 148,407,778 RGD:1624291
RGD:1600115
G Fubp3 far upstream element binding protein 3 JBrowse link 3 10,220,712 10,269,757 RGD:1624291
RGD:1600115
G Gabpa GA binding protein transcription factor subunit alpha JBrowse link 11 24,293,845 24,322,822 RGD:1624291
RGD:1600115
G Gata1 GATA binding protein 1 JBrowse link X 15,273,937 15,281,759 RGD:1624291
RGD:13792537
G Gata2 GATA binding protein 2 JBrowse link 4 120,129,028 120,142,490 RGD:1624291
RGD:13792537
G Gata3 GATA binding protein 3 JBrowse link 17 72,419,752 72,452,043 RGD:1624291
RGD:13792537
G Gata4 GATA binding protein 4 JBrowse link 15 46,386,703 46,458,679 RGD:1624291
RGD:13792537
G Gata5 GATA binding protein 5 JBrowse link 3 175,701,278 175,709,465 RGD:13792537
G Gata6 GATA binding protein 6 JBrowse link 18 2,415,821 2,447,087 RGD:1624291
RGD:13792537
RGD:1600115
G Gcfc2 GC-rich sequence DNA-binding factor 2 JBrowse link 4 112,662,556 112,700,505 RGD:1624291
RGD:13792537
G Gcm1 glial cells missing transcription factor 1 JBrowse link 8 85,355,766 85,369,002 RGD:1624291
RGD:1600115
G Gli1 GLI family zinc finger 1 JBrowse link 7 70,620,794 70,633,171 RGD:1624291
RGD:1600115
G Gli2 GLI family zinc finger 2 JBrowse link 13 34,829,021 35,049,172 RGD:1624291
G Gli3 GLI family zinc finger 3 JBrowse link 17 52,294,942 52,569,036 RGD:1624291
RGD:1600115
G Glis3 GLIS family zinc finger 3 JBrowse link 1 246,380,816 246,564,385 RGD:1624291
G Gmeb1 glucocorticoid modulatory element binding protein 1 JBrowse link 5 150,408,075 150,449,252 RGD:1624291
RGD:13792537
G Gmeb2 glucocorticoid modulatory element binding protein 2 JBrowse link 3 176,756,006 176,791,960 RGD:13792537
G Grhl1 grainyhead-like transcription factor 1 JBrowse link 6 43,734,837 43,795,757 RGD:1624291
RGD:1600115
G Grhl3 grainyhead-like transcription factor 3 JBrowse link 5 153,893,039 153,925,045 RGD:1624291
G Gsc goosecoid homeobox JBrowse link 6 128,147,181 128,149,220 RGD:1624291
RGD:1600115
G Gsx1 GS homeobox 1 JBrowse link 12 9,605,873 9,607,168 RGD:1624291
RGD:13792537
G Gzf1 GDNF-inducible zinc finger protein 1 JBrowse link 3 143,003,706 143,015,906 RGD:1624291
RGD:1600115
G H2az1 H2A.Z variant histone 1 JBrowse link 2 243,105,224 243,107,333 RGD:1624291
G Hand1 heart and neural crest derivatives expressed 1 JBrowse link 10 43,250,729 43,253,296 RGD:1624291
RGD:1600115
G Hbp1 HMG-box transcription factor 1 JBrowse link 6 51,231,479 51,257,699 RGD:12911006
G Hdac1 histone deacetylase 1 JBrowse link 5 147,716,664 147,743,723 RGD:1624291
G Hdac2 histone deacetylase 2 JBrowse link 20 43,084,870 43,108,198 RGD:1624291
G Hdac4 histone deacetylase 4 JBrowse link 9 99,052,945 99,299,715 RGD:1600115
RGD:1624291
G Hdac5 histone deacetylase 5 JBrowse link 10 90,140,183 90,169,853 RGD:1600115
RGD:1624291
G Hdac6 histone deacetylase 6 JBrowse link X 15,295,372 15,316,673 RGD:1624291
G Hdgf heparin binding growth factor JBrowse link 2 187,274,898 187,284,670 RGD:8554761
G Helt helt bHLH transcription factor JBrowse link 16 49,185,560 49,187,293 RGD:1624291
RGD:1600115
G Hes2 hes family bHLH transcription factor 2 JBrowse link 5 169,338,097 169,339,142 RGD:61626
G Hes3 hes family bHLH transcription factor 3 JBrowse link 5 169,463,196 169,469,795 RGD:1624291
RGD:1600115
G Hesx1 HESX homeobox 1 JBrowse link 16 2,616,538 2,636,708 RGD:1624291
RGD:1600115
G Heyl hes-related family bHLH transcription factor with YRPW motif-like JBrowse link 5 140,923,914 140,940,905 RGD:1600115
RGD:1624291
G Hhex hematopoietically expressed homeobox JBrowse link 1 256,101,994 256,107,581 RGD:1624291
RGD:1600115
G Hinfp histone H4 transcription factor JBrowse link 8 48,626,398 48,638,012 RGD:1624291
RGD:1600115
G Hivep2 human immunodeficiency virus type I enhancer binding protein 2 JBrowse link 1 8,129,354 8,333,890 RGD:12790649
G Hltf helicase-like transcription factor JBrowse link 2 104,854,571 104,914,338 RGD:1624291
RGD:1600115
G Hmga2 high mobility group AT-hook 2 JBrowse link 7 65,159,944 65,275,408 RGD:1600115
RGD:1624291
G Hnf1a HNF1 homeobox A JBrowse link 12 47,407,811 47,433,342 RGD:1624291
RGD:1600115
G Hnf4a hepatocyte nuclear factor 4, alpha JBrowse link 3 159,902,441 159,965,003 RGD:1624291
RGD:1600115
G Hnf4g hepatocyte nuclear factor 4, gamma JBrowse link 2 100,225,880 100,372,710 RGD:1624291
RGD:1600115
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 17 6,664,730 6,676,753 RGD:1624291
RGD:1600115
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link 13 96,222,093 96,238,845 RGD:1624291
RGD:13792537
RGD:1600115
G Hoxa10 homeobox A10 JBrowse link 4 82,285,940 82,295,892 RGD:1624291
G Hoxa13 homeo box A13 RGD:1624291
G Hoxa2 homeobox A2 JBrowse link 4 82,130,441 82,134,846 RGD:1624291
RGD:13792537
G Hoxa3 homeobox A3 JBrowse link 4 82,137,802 82,181,836 RGD:13792537
G Hoxa5 homeo box A5 RGD:1624291
G Hoxa7 homeobox A7 JBrowse link 4 82,184,299 82,187,890 RGD:1624291
G Hoxa9 homeobox A9 RGD:1624291
G Hoxb1 homeo box B1 JBrowse link 10 84,214,358 84,215,812 RGD:1624291
RGD:1600115
G Hoxb2 homeobox B2 JBrowse link 10 84,200,859 84,203,065 RGD:13792537
G Hoxb3 homeo box B3 JBrowse link 10 84,170,629 84,196,823 RGD:1624291
RGD:13792537
G Hoxb7 homeo box B7 JBrowse link 10 84,135,224 84,138,642 RGD:1624291
RGD:1600115
G Hoxc11 homeobox C11 JBrowse link 7 144,565,392 144,568,580 RGD:1624291
RGD:1600115
G Hoxd13 homeo box D13 JBrowse link 3 61,590,376 61,593,692 RGD:1624291
RGD:1600115
G Hoxd3 homeo box D3 JBrowse link 3 61,650,569 61,670,285 RGD:13792537
G Hsf1 heat shock transcription factor 1 JBrowse link 7 117,538,523 117,565,478 RGD:1624291
RGD:13792537
G Hsf2 heat shock transcription factor 2 JBrowse link 20 38,935,820 38,963,444 RGD:1624291
RGD:13792537
G Hsf4 heat shock transcription factor 4 JBrowse link 19 37,225,800 37,232,048 RGD:13792537
G Hsf5 heat shock transcription factor 5 JBrowse link 10 74,909,621 74,954,128 RGD:13792537
G Hsfy2 heat shock transcription factor, Y linked 2 JBrowse link 9 63,289,937 63,291,350 RGD:13792537
G Ikzf1 IKAROS family zinc finger 1 JBrowse link 14 91,782,281 91,867,828 RGD:1624291
G Insm1 INSM transcriptional repressor 1 JBrowse link 3 140,427,961 140,430,467 RGD:1624291
G Irf1 interferon regulatory factor 1 JBrowse link 10 39,109,530 39,116,532 RGD:1600115
RGD:1624291
G Irf3 interferon regulatory factor 3 JBrowse link 1 100,992,244 100,997,202 RGD:1624291
RGD:1600115
G Irf4 interferon regulatory factor 4 JBrowse link 17 34,886,746 34,905,191 RGD:1624291
RGD:1600115
G Irf7 interferon regulatory factor 7 JBrowse link 1 214,249,388 214,252,909 RGD:1600115
RGD:1624291
G Irf8 interferon regulatory factor 8 JBrowse link 19 54,314,859 54,336,643 RGD:1624291
RGD:1600115
G Irf9 interferon regulatory factor 9 JBrowse link 15 34,282,936 34,288,981 RGD:1600115
RGD:1624291
G Isl1 ISL LIM homeobox 1 JBrowse link 2 48,488,911 48,501,217 RGD:8553931
G Jdp2 Jun dimerization protein 2 JBrowse link 6 109,464,910 109,505,591 RGD:1624291
RGD:13792537
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:13792537
G Junb JunB proto-oncogene, AP-1 transcription factor subunit JBrowse link 19 26,092,972 26,094,756 RGD:1624291
RGD:13792537
RGD:1600115
G Jund JunD proto-oncogene, AP-1 transcription factor subunit JBrowse link 16 20,485,028 20,486,707 RGD:1624291
RGD:13792537
G Kcnh8 potassium voltage-gated channel subfamily H member 8 JBrowse link 9 3,127,618 3,697,736 RGD:1298911
G Kcnip3 potassium voltage-gated channel interacting protein 3 JBrowse link 3 120,023,062 120,087,650 RGD:1624291
G Kdm1a lysine demethylase 1A JBrowse link 5 154,909,003 154,965,171 RGD:1624291
G Kdm2b lysine demethylase 2B JBrowse link 12 39,021,924 39,161,954 RGD:1624291
G Kdm6a lysine demethylase 6A JBrowse link X 4,805,493 4,945,788 RGD:1624291
RGD:13792537
G Kdm6b lysine demethylase 6B JBrowse link 10 56,000,494 56,009,582 RGD:13792537
G Klf1 Kruppel like factor 1 JBrowse link 19 26,016,289 26,019,557 RGD:1624291
G Klf10 Kruppel-like factor 10 JBrowse link 7 77,156,010 77,162,096 RGD:1624291
RGD:1600115
G Klf13 Kruppel-like factor 13 JBrowse link 1 124,772,596 124,803,363 RGD:1624291
G Klf15 Kruppel-like factor 15 JBrowse link 4 122,364,688 122,377,690 RGD:1624291
RGD:1600115
G Klf16 Kruppel-like factor 16 JBrowse link 7 12,006,710 12,016,529 RGD:1624291
RGD:1600115
G Klf17 Kruppel-like factor 17 JBrowse link 5 136,602,472 136,610,058 RGD:1624291
G Klf4 Kruppel like factor 4 JBrowse link 5 72,283,311 72,287,669 RGD:1600115
RGD:1624291
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:1624291
RGD:1600115
G Klf6 Kruppel-like factor 6 JBrowse link 17 67,887,939 67,945,052 RGD:1624291
G Klf7 Kruppel like factor 7 JBrowse link 9 70,740,480 70,787,913 RGD:1624291
G Klf8 Kruppel-like factor 8 JBrowse link X 18,836,902 19,032,012 RGD:1624291
RGD:1600115
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 2 236,232,115 236,345,061 RGD:1600115
RGD:13792537
RGD:1624291
G Lhx2 LIM homeobox 2 JBrowse link 3 22,628,674 22,658,447 RGD:1600115
RGD:1624291
G Lhx3 LIM homeobox 3 JBrowse link 3 3,653,861 3,662,509 RGD:1600115
G Litaf lipopolysaccharide-induced TNF factor JBrowse link 10 4,753,546 4,763,272 RGD:1624291
RGD:1600115
G LOC100361016 oocyte specific homeobox 5-like JBrowse link X 93,064,417 93,067,181 RGD:13792537
G LOC100909657 uncharacterized LOC100909657 JBrowse link 4 149,902,278 149,909,841 RGD:1624291
G LOC108348091 erythroid transcription factor JBrowse link X 15,374,725 15,382,575 RGD:13792537
G LOC108348320 homeobox protein Hox-A3 RGD:13792537
G LOC691325 similar to oocyte specific homeobox 3 JBrowse link 1 71,765,971 71,767,523 RGD:13792537
G Lrrfip1 LRR binding FLII interacting protein 1 JBrowse link 9 98,139,484 98,268,148 RGD:1624291
RGD:1600115
G Maf MAF bZIP transcription factor JBrowse link 19 48,179,826 48,200,995 RGD:13792537
G Mafa MAF bZIP transcription factor A JBrowse link 7 116,779,368 116,781,815 RGD:1624291
RGD:13792537
G Mafb MAF bZIP transcription factor B JBrowse link 3 156,338,993 156,340,913 RGD:1624291
RGD:13792537
G Maff MAF bZIP transcription factor F JBrowse link 7 120,580,743 120,592,095 RGD:13792537
G Mafg MAF bZIP transcription factor G JBrowse link 10 109,802,877 109,811,476 RGD:1624291
RGD:13792537
G Mafk MAF bZIP transcription factor K JBrowse link 12 16,923,989 16,934,706 RGD:13792537
G Max MYC associated factor X JBrowse link 6 99,984,260 100,011,460 RGD:1624291
G Maz MYC associated zinc finger protein JBrowse link 1 198,456,699 198,460,126 RGD:1600115
RGD:1624291
G Mecom MDS1 and EVI1 complex locus JBrowse link 2 117,396,084 117,993,604 RGD:1624291
G Med1 mediator complex subunit 1 JBrowse link 10 86,101,560 86,145,271 RGD:5128544
G Mef2a myocyte enhancer factor 2a JBrowse link 1 128,207,715 128,341,681 RGD:1624291
RGD:13792537
RGD:1600115
G Mef2b myocyte enhancer factor 2B JBrowse link 16 21,001,204 21,017,651 RGD:1624291
RGD:13792537
G Mef2c myocyte enhancer factor 2C JBrowse link 2 11,658,534 11,822,788 RGD:1600115
RGD:13792537
RGD:1624291
G Mef2d myocyte enhancer factor 2D JBrowse link 2 187,511,775 187,541,285 RGD:1624291
RGD:13792537
RGD:1600115
G Meis1 Meis homeobox 1 JBrowse link 14 103,182,178 103,321,809 RGD:1624291
G Meis2 Meis homeobox 2 JBrowse link 3 107,560,172 107,762,732 RGD:1624291
RGD:1600115
G Meox1 mesenchyme homeobox 1 JBrowse link 10 89,797,011 89,817,009 RGD:1600115
RGD:1624291
G Meox2 mesenchyme homeobox 2 JBrowse link 6 56,625,768 56,689,195 RGD:1624291
RGD:1600115
G Mesp1 mesoderm posterior bHLH transcription factor 1 JBrowse link 1 141,532,390 141,533,908 RGD:1624291
RGD:13792537
G Mesp2 mesoderm posterior bHLH transcription factor 2 JBrowse link 1 141,550,633 141,553,239 RGD:1624291
RGD:13792537
G Mir208b microRNA 208b JBrowse link 15 33,639,510 33,639,621 RGD:1624291
G Mitf melanocyte inducing transcription factor JBrowse link 4 130,172,484 130,425,496 RGD:1624291
G Mixl1 Mix paired-like homeobox 1 JBrowse link 13 97,278,258 97,282,299 RGD:1624291
RGD:13792537
G Mkx mohawk homeobox JBrowse link 17 60,537,615 60,553,284 RGD:1624291
G Mlxipl MLX interacting protein-like JBrowse link 12 24,590,645 24,619,639 RGD:1624291
G Msgn1 mesogenin 1 JBrowse link 6 36,876,165 36,876,805 RGD:13792537
G Msx2 msh homeobox 2 JBrowse link 17 11,683,862 11,689,527 RGD:5132614
G Mta1 metastasis associated 1 JBrowse link 6 137,911,302 137,950,066 RGD:1600115
RGD:1624291
G Mtf1 metal-regulatory transcription factor 1 JBrowse link 5 142,797,340 142,843,896 RGD:1624291
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:1624291
G Mxd1 max dimerization protein 1 JBrowse link 4 118,451,752 118,472,150 RGD:1624291
RGD:1600115
G Myb MYB proto-oncogene, transcription factor JBrowse link 1 16,658,178 16,690,135 RGD:1624291
RGD:1600115
G Mybl1 MYB proto-oncogene like 1 JBrowse link 5 9,279,756 9,315,112 RGD:1624291
RGD:1600115
G Mybl2 MYB proto-oncogene like 2 JBrowse link 3 159,421,638 159,450,087 RGD:1624291
RGD:1600115
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:1624291
RGD:13792537
G Mycl MYCL proto-oncogene, bHLH transcription factor JBrowse link 5 140,691,947 140,698,837 RGD:13792537
G Mycn MYCN proto-oncogene, bHLH transcription factor JBrowse link 6 38,222,554 38,228,419 RGD:1624291
RGD:13792537
G Mycs myc-like oncogene, s-myc protein JBrowse link X 17,823,554 17,824,846 RGD:13792537
G Myef2 myelin expression factor 2 JBrowse link 3 117,353,490 117,389,582 RGD:1624291
RGD:13792537
G Myf5 myogenic factor 5 JBrowse link 7 49,729,533 49,732,974 RGD:13792537
G Myf6 myogenic factor 6 JBrowse link 7 49,739,643 49,741,490 RGD:13792537
G Myocd myocardin JBrowse link 10 51,682,053 51,781,458 RGD:1600115
RGD:1624291
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:1624291
RGD:13792537
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:1624291
RGD:13792537
RGD:8553747
G Mypop Myb-related transcription factor, partner of profilin JBrowse link 1 79,898,492 79,909,336 RGD:1624291
RGD:13792537
G Mzf1 myeloid zinc finger 1 JBrowse link 1 65,520,827 65,533,233 RGD:1624291
RGD:1600115
G Nacc2 NACC family member 2 JBrowse link 3 3,508,084 3,574,787 RGD:1624291
RGD:1600115
G Nanog Nanog homeobox JBrowse link 4 155,531,906 155,539,268 RGD:13792537
G Ncoa2 nuclear receptor coactivator 2 JBrowse link 5 5,466,544 5,696,540 RGD:1624291
RGD:1600115
G Ndn necdin, MAGE family member JBrowse link 1 122,981,755 122,983,354 RGD:1624291
RGD:1600115
G Neurod1 neuronal differentiation 1 JBrowse link 3 66,414,314 66,417,617 RGD:1624291
G Neurod6 neuronal differentiation 6 JBrowse link 4 85,911,861 85,915,107 RGD:1624291
RGD:1600115
G Neurog3 neurogenin 3 JBrowse link 20 31,761,419 31,762,893 RGD:1624291
RGD:1600115
G NEWGENE_1310011 Mix paired-like homeobox JBrowse link 13 98,972,959 98,975,426 RGD:13792537
G Nfat5 nuclear factor of activated T-cells 5 JBrowse link 19 38,446,059 38,533,735 RGD:1600115
RGD:13792537
RGD:1624291
G Nfatc1 nuclear factor of activated T-cells 1 JBrowse link 18 77,203,517 77,322,690 RGD:1624291
RGD:13792537
G Nfatc2 nuclear factor of activated T-cells 2 JBrowse link 3 165,241,750 165,374,644 RGD:1624291
RGD:13792537
G Nfatc3 nuclear factor of activated T-cells 3 JBrowse link 19 38,039,542 38,114,003 RGD:1624291
RGD:13792537
G Nfatc4 nuclear factor of activated T-cells 4 JBrowse link 15 34,493,163 34,502,238 RGD:1624291
RGD:13792537
G Nfe2l1 nuclear factor, erythroid 2-like 1 JBrowse link 10 84,686,762 84,699,313 RGD:1624291
G Nfe2l3 nuclear factor, erythroid 2-like 3 JBrowse link 4 81,205,214 81,233,068 RGD:1624291
RGD:1600115
G Nfia nuclear factor I/A JBrowse link 5 116,421,895 116,750,381 RGD:1624291
RGD:1600115
G Nfib nuclear factor I/B JBrowse link 5 100,436,343 100,647,962 RGD:1624291
RGD:1600115
G Nfic nuclear factor I/C JBrowse link 7 11,151,941 11,179,544 RGD:1624291
RGD:1600115
G Nfil3 nuclear factor, interleukin 3 regulated JBrowse link 17 12,261,102 12,276,316 RGD:1624291
RGD:1600115
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link 2 240,773,520 240,890,053 RGD:1624291
G Nfkb2 nuclear factor kappa B subunit 2 JBrowse link 1 266,050,634 266,059,277 RGD:1624291
RGD:1600115
G Nfya nuclear transcription factor Y subunit alpha JBrowse link 9 14,551,752 14,577,002 RGD:1600115
RGD:1624291
G Nfyc nuclear transcription factor Y subunit gamma JBrowse link 5 139,687,442 139,760,154 RGD:1624291
RGD:1600115
G Nhlh2 nescient helix loop helix 2 JBrowse link 2 204,427,577 204,432,946 RGD:1624291
RGD:1600115
G Nkrf NFKB repressing factor JBrowse link X 123,502,074 123,516,301 RGD:1624291
RGD:13792537
G Nkx1-1 NK1 homeobox 1 JBrowse link 14 82,603,538 82,607,031 RGD:13792537
G Nkx1-2 NK1 homeobox 2 JBrowse link 1 204,603,116 204,605,552 RGD:13792537
G Nkx2-1 NK2 homeobox 1 JBrowse link 6 77,418,096 77,423,383 RGD:1600115
RGD:13792537
RGD:1624291
G Nkx2-2 NK2 homeobox 2 JBrowse link 3 141,408,460 141,419,083 RGD:13792537
G Nkx2-3 NK2 homeobox 3 JBrowse link 1 263,361,238 263,371,043 RGD:13792537
G Nkx2-5 NK2 homeobox 5 JBrowse link 10 16,635,989 16,638,758 RGD:1600115
RGD:13792537
RGD:1624291
G Nkx2-6 NK2 homeobox 6 JBrowse link 15 51,034,620 51,038,715 RGD:13792537
G Nkx2-8 NK2 homeobox 8 JBrowse link 6 77,506,882 77,508,585 RGD:1624291
RGD:13792537
G Nkx3-1 NK3 homeobox 1 JBrowse link 15 51,065,316 51,067,908 RGD:1600115
RGD:13792537
RGD:1624291
G Nkx3-2 NK3 homeobox 2 JBrowse link 14 73,813,531 73,818,489 RGD:1624291
RGD:13792537
G Nkx6-1 NK6 homeobox 1 JBrowse link 14 9,555,264 9,562,197 RGD:2306242
RGD:13792537
G Nkx6-2 NK6 homeobox 2 JBrowse link 1 211,922,389 211,923,929 RGD:1624291
RGD:13792537
G Nkx6-3 NK6 homeobox 3 JBrowse link 16 73,665,269 73,670,482 RGD:13792537
G Nlrc5 NLR family, CARD domain containing 5 JBrowse link 19 10,904,381 11,006,202 RGD:1600115
RGD:1624291
G Nobox NOBOX oogenesis homeobox JBrowse link 4 72,749,239 72,757,066 RGD:1624291
G Notch1 notch receptor 1 JBrowse link 3 3,905,562 3,951,015 RGD:1600115
RGD:1624291
G Noto notochord homeobox JBrowse link 4 117,206,355 117,210,856 RGD:13792537
G Npas4 neuronal PAS domain protein 4 JBrowse link 1 220,260,310 220,278,177 RGD:1624291
RGD:1600115
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 10 86,683,875 86,690,815 RGD:1624291
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 JBrowse link 15 8,730,871 8,757,165 RGD:1600115
RGD:1624291
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 JBrowse link 1 100,554,577 100,559,896 RGD:8661622
RGD:1624291
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 JBrowse link 3 80,004,130 80,014,197 RGD:1624291
RGD:1600115
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 7 30,003,429 30,162,095 RGD:70562
G Nr2c1 nuclear receptor subfamily 2, group C, member 1 JBrowse link 7 35,069,807 35,122,810 RGD:1624291
RGD:1600115
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 JBrowse link 4 124,005,287 124,030,349 RGD:1624291
RGD:1600115
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 20 47,286,843 47,306,318 RGD:1624291
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 8 64,797,518 64,801,587 RGD:1624291
RGD:1600115
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 JBrowse link 2 5,569,954 5,579,894 RGD:1624291
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 JBrowse link 18 31,728,373 32,704,022 RGD:1624291
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 JBrowse link 7 142,899,358 142,920,216 RGD:13792537
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:8553440
RGD:13792537
RGD:1600115
RGD:1624291
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 JBrowse link 5 63,781,801 63,822,890 RGD:1624291
RGD:13792537
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 JBrowse link 3 22,998,900 23,020,441 RGD:1624291
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 JBrowse link 13 53,750,470 53,870,288 RGD:1624291
RGD:1600115
G Nr6a1 nuclear receptor subfamily 6, group A, member 1 JBrowse link 3 23,029,222 23,218,050 RGD:1624291
RGD:1600115
G Nrf1 nuclear respiratory factor 1 JBrowse link 4 57,335,732 57,445,317 RGD:1624291
RGD:1600115
G Nrip1 nuclear receptor interacting protein 1 JBrowse link 11 14,658,225 14,742,478 RGD:1624291
RGD:1600115
G Nrl neural retina leucine zipper JBrowse link 15 34,197,115 34,201,408 RGD:1624291
RGD:13792537
G Nsd1 nuclear receptor binding SET domain protein 1 JBrowse link 17 9,840,859 9,955,391 RGD:1600115
RGD:1624291
G Obox2 oocyte specific homeobox 2 JBrowse link 1 71,782,600 71,787,244 RGD:13792537
G Onecut1 one cut homeobox 1 JBrowse link 8 81,765,779 81,799,894 RGD:1624291
G Onecut2 one cut homeobox 2 JBrowse link 18 59,830,375 59,882,490 RGD:1624291
RGD:1600115
G Otx1 orthodenticle homeobox 1 JBrowse link 14 106,861,556 106,864,933 RGD:1624291
RGD:1600115
G Otx2 orthodenticle homeobox 2 JBrowse link 15 25,500,037 25,511,619 RGD:1624291
G Ovol1 ovo like transcriptional repressor 1 JBrowse link 1 220,927,309 220,938,814 RGD:1624291
RGD:1600115
G Patz1 POZ (BTB) and AT hook containing zinc finger 1 JBrowse link 14 83,509,763 83,528,898 RGD:1624291
RGD:1600115
G Pax1 paired box 1 JBrowse link 3 141,577,124 141,589,849 RGD:1624291
G Pax2 paired box 2 JBrowse link 1 264,493,579 264,585,073 RGD:1624291
G Pax5 paired box 5 JBrowse link 5 60,007,587 60,191,973 RGD:1624291
RGD:1600115
G Pax6 paired box 6 JBrowse link 3 95,700,241 95,728,682 RGD:1600115
RGD:1624291
RGD:8552352
G Pax8 paired box 8 JBrowse link 3 1,527,316 1,586,019 RGD:8661624
RGD:1624291
RGD:1600115
G Paxbp1 PAX3 and PAX7 binding protein 1 JBrowse link 11 31,184,456 31,213,891 RGD:13792537
G Pbx1 PBX homeobox 1 JBrowse link 13 86,390,741 86,671,460 RGD:1624291
G Pdx1 pancreatic and duodenal homeobox 1 JBrowse link 12 9,496,044 9,501,211 RGD:1624291
RGD:13792537
G Per1 period circadian regulator 1 JBrowse link 10 55,681,761 55,696,557 RGD:1624291
G Pgr progesterone receptor JBrowse link 8 7,128,656 7,187,796 RGD:1624291
RGD:1600115
G Phox2a paired-like homeobox 2a JBrowse link 1 166,893,734 166,898,252 RGD:631925
G Phox2b paired-like homeobox 2b JBrowse link 14 42,711,169 42,718,707 RGD:1624291
RGD:1600115
G Pitx1 paired-like homeodomain 1 JBrowse link 17 8,873,184 8,884,428 RGD:1624291
RGD:13792537
G Pitx2 paired-like homeodomain 2 JBrowse link 2 233,602,732 233,621,059 RGD:5132604
RGD:13792537
G Pitx3 paired-like homeodomain 3 JBrowse link 1 265,886,766 265,899,947 RGD:1624291
RGD:13792537
G Pknox1 PBX/knotted 1 homeobox 1 JBrowse link 20 10,331,608 10,358,922 RGD:1624291
G Plag1 PLAG1 zinc finger JBrowse link 5 16,788,186 16,842,827 RGD:1624291
RGD:1600115
G Pou1f1 POU class 1 homeobox 1 JBrowse link 11 2,645,659 2,662,581 RGD:8661635
G Pou2af1 POU class 2 homeobox associating factor 1 JBrowse link 8 55,603,968 55,631,448 RGD:1600115
RGD:1624291
G Pou2f1 POU class 2 homeobox 1 JBrowse link 13 84,075,316 84,217,368 RGD:1600115
RGD:1624291
G Pou2f2 POU class 2 homeobox 2 JBrowse link 1 81,966,791 82,049,116 RGD:1624291
G Pou2f3 POU class 2 homeobox 3 JBrowse link 8 47,412,063 47,495,042 RGD:1624291
RGD:1600115
G Pou3f1 POU class 3 homeobox 1 JBrowse link 5 142,643,599 142,646,580 RGD:729433
G Pou3f2 POU class 3 homeobox 2 JBrowse link 5 36,677,452 36,683,356 RGD:1624291
RGD:1600115
G Pou4f2 POU class 4 homeobox 2 JBrowse link 19 33,160,180 33,163,821 RGD:1624291
RGD:1600115
G Pou4f3 POU class 4 homeobox 3 JBrowse link 18 36,713,869 36,716,461 RGD:1624291
RGD:1600115
G Pou5f1 POU class 5 homeobox 1 JBrowse link 20 3,747,231 3,751,994 RGD:1624291
RGD:1600115
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:1624291
RGD:1600115
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:1624291
G Prdm1 PR/SET domain 1 JBrowse link 20 49,464,921 49,556,623 RGD:1624291
RGD:1600115
G Prdm15 PR/SET domain 15 JBrowse link 11 38,294,040 38,354,648 RGD:1600115
RGD:1624291
G Prdm4 PR/SET domain 4 JBrowse link 7 23,959,932 23,986,535 RGD:1624291
RGD:1600115
G Prdm5 PR/SET domain 5 JBrowse link 4 96,659,062 96,810,816 RGD:1624291
RGD:1600115
G Preb prolactin regulatory element binding JBrowse link 6 26,784,088 26,787,875 RGD:61705
G Prox1 prospero homeobox 1 JBrowse link 13 108,382,536 108,444,107 RGD:1600115
RGD:1624291
G Prrx1 paired related homeobox 1 JBrowse link 13 81,147,038 81,215,559 RGD:1624291
RGD:1600115
G Rad23b RAD23 homolog B, nucleotide excision repair protein JBrowse link 5 72,103,704 72,141,701 RGD:1600115
RGD:1624291
G Rax retina and anterior neural fold homeobox JBrowse link 18 61,638,352 61,642,056 RGD:1624291
RGD:1600115
G Rbbp4 RB binding protein 4, chromatin remodeling factor JBrowse link 5 147,499,880 147,535,240 RGD:1624291
RGD:1600115
G Rbmx RNA binding motif protein, X-linked JBrowse link X 159,881,835 159,891,405 RGD:1624291
RGD:1600115
G Rbmxl1 RBMX like 1 JBrowse link 19 33,081,473 33,084,988 RGD:1624291
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link 14 59,657,738 59,865,427 RGD:1624291
RGD:1600115
G Rbpjl recombination signal binding protein for immunoglobulin kappa J region-like JBrowse link 3 160,851,836 160,865,125 RGD:1600115
G Rbpjl2 recombination signal binding protein for immunoglobulin kappa J region-like 2 JBrowse link 5 4,877,924 4,879,637 RGD:1600115
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:11059577
RGD:1624291
G Relb RELB proto-oncogene, NF-kB subunit JBrowse link 1 80,517,081 80,545,019 RGD:1624291
G Rest RE1-silencing transcription factor JBrowse link 14 33,131,985 33,152,019 RGD:1600115
RGD:1624291
G Rfx1 regulatory factor X1 JBrowse link 19 25,181,564 25,212,410 RGD:13792537
G Rfx2 regulatory factor X2 JBrowse link 9 10,216,194 10,283,467 RGD:11041022
RGD:13792537
RGD:1624291
RGD:1600115
RGD:11041070
G Rfx3 regulatory factor X3 JBrowse link 1 245,853,332 246,110,648 RGD:13792537
G Rfx4 regulatory factor X4 JBrowse link 7 25,831,358 25,909,976 RGD:1624291
RGD:13792537
G Rfx5 regulatory factor X5 JBrowse link 2 196,119,054 196,128,109 RGD:13792537
G Rfx6 regulatory factor X, 6 JBrowse link 20 32,709,282 32,764,040 RGD:13792537
G Rfx7 regulatory factor X, 7 JBrowse link 8 79,159,297 79,279,962 RGD:13792537
G Rfx8 RFX family member 8, lacking RFX DNA binding domain JBrowse link 9 46,414,407 46,476,076 RGD:13792537
G RGD1564236 similar to OBOX3 JBrowse link 9 101,196,199 101,198,944 RGD:13792537
G Rora RAR-related orphan receptor A JBrowse link 8 75,515,886 75,616,477 RGD:1600115
RGD:1624291
G Rorb RAR-related orphan receptor B JBrowse link 1 234,252,757 234,442,597 RGD:1600115
RGD:1624291
G Rorc RAR-related orphan receptor C JBrowse link 2 195,612,471 195,636,797 RGD:1624291
RGD:1600115
G Rreb1 ras responsive element binding protein 1 JBrowse link 17 27,539,137 27,718,878 RGD:1624291
RGD:13792537
G Runx1 RUNX family transcription factor 1 JBrowse link 11 32,765,147 33,003,061 RGD:1600115
RGD:1624291
G Runx2 RUNX family transcription factor 2 JBrowse link 9 18,564,743 18,773,092 RGD:1600115
RGD:1624291
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:1624291
G Safb scaffold attachment factor B JBrowse link 9 10,450,216 10,471,174 RGD:1600115
RGD:1624291
G Sall1 spalt-like transcription factor 1 JBrowse link 19 23,387,737 23,405,025 RGD:1624291
RGD:1600115
G Sarnp SAP domain containing ribonucleoprotein JBrowse link 7 3,246,220 3,300,467 RGD:1600115
G Sars1 seryl-tRNA synthetase 1 JBrowse link 2 211,219,743 211,235,475 RGD:1600115
RGD:1624291
G Satb2 SATB homeobox 2 JBrowse link 9 63,456,877 63,642,193 RGD:1600115
RGD:1624291
G Six1 SIX homeobox 1 JBrowse link 6 95,929,060 95,934,296 RGD:1624291
RGD:1600115
G Six2 SIX homeobox 2 JBrowse link 6 8,952,572 8,955,893 RGD:1624291
RGD:1600115
G Six4 SIX homeobox 4 JBrowse link 6 95,984,868 95,999,709 RGD:1624291
RGD:1600115
G Six5 SIX homeobox 5 JBrowse link 1 80,000,106 80,005,303 RGD:1624291
RGD:1600115
G Skil SKI-like proto-oncogene JBrowse link 2 115,862,932 115,891,304 RGD:1624291
RGD:1600115
G Smad1 SMAD family member 1 JBrowse link 19 32,182,942 32,248,694 RGD:1624291
RGD:1600115
G Smad2 SMAD family member 2 JBrowse link 18 72,550,107 72,612,078 RGD:1624291
RGD:1600115
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:1624291
RGD:1600115
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:1624291
RGD:1600115
G Smad5 SMAD family member 5 JBrowse link 17 8,307,448 8,336,996 RGD:1624291
RGD:1600115
G Smad6 SMAD family member 6 JBrowse link 8 68,897,746 68,967,221 RGD:1624291
RGD:1600115
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 8 22,648,323 22,739,468 RGD:1624291
G Smyd3 SET and MYND domain containing 3 JBrowse link 13 97,330,120 97,807,813 RGD:1624291
G Snai3 snail family transcriptional repressor 3 JBrowse link 19 55,276,211 55,290,031 RGD:1624291
RGD:1600115
G Sox1 SRY-box transcription factor 1 RGD:1624291
G Sox10 SRY-box transcription factor 10 JBrowse link 7 120,393,238 120,403,523 RGD:1624291
RGD:1600115
G Sox11 SRY-box transcription factor 11 JBrowse link 6 46,629,967 46,631,988 RGD:1600115
RGD:1624291
G Sox18 SRY-box transcription factor 18 JBrowse link 3 177,177,237 177,179,039 RGD:1624291
RGD:1600115
G Sox2 SRY-box transcription factor 2 JBrowse link 2 121,165,137 121,167,545 RGD:1624291
G Sox21 SRY-box transcription factor 21 JBrowse link 15 103,438,674 103,441,405 RGD:1624291
G Sox4 SRY-box transcription factor 4 JBrowse link 17 37,615,022 37,619,728 RGD:1624291
G Sox6 SRY-box transcription factor 6 JBrowse link 1 185,631,702 186,186,192 RGD:1624291
RGD:1600115
G Sox9 SRY-box transcription factor 9 JBrowse link 10 101,288,528 101,294,030 RGD:1600115
RGD:1624291
G Sp1 Sp1 transcription factor JBrowse link 7 144,014,173 144,044,635 RGD:11059577
RGD:1624291
RGD:1600115
G Sp2 Sp2 transcription factor JBrowse link 10 84,890,930 84,920,886 RGD:1624291
RGD:1600115
G Sp3 Sp3 transcription factor JBrowse link 3 59,644,579 59,689,011 RGD:1624291
RGD:1600115
G Sp7 Sp7 transcription factor JBrowse link 7 143,957,316 143,967,488 RGD:1624291
RGD:1600115
G Spi1 Spi-1 proto-oncogene JBrowse link 3 79,918,127 79,937,708 RGD:1624291
RGD:1600115
G Spic Spi-C transcription factor JBrowse link 7 29,225,721 29,233,452 RGD:1624291
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:8553473
RGD:13792537
RGD:1624291
G Srebf2 sterol regulatory element binding transcription factor 2 JBrowse link 7 123,381,082 123,438,605 RGD:1624291
RGD:13792537
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:1624291
G St18 ST18 C2H2C-type zinc finger transcription factor JBrowse link 5 12,437,617 12,787,223 RGD:1600115
RGD:1624291
G Stat1 signal transducer and activator of transcription 1 JBrowse link 9 54,287,540 54,327,958 RGD:1624291
RGD:13792537
G Stat2 signal transducer and activator of transcription 2 JBrowse link 7 2,691,064 2,707,530 RGD:13792537
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:1624291
RGD:13792537
G Stat4 signal transducer and activator of transcription 4 JBrowse link 9 54,340,649 54,457,753 RGD:1624291
RGD:13792537
G Stat5a signal transducer and activator of transcription 5A JBrowse link 10 88,764,732 88,789,060 RGD:1624291
RGD:13792537
G Stat5b signal transducer and activator of transcription 5B JBrowse link 10 88,686,207 88,712,313 RGD:1624291
RGD:13792537
RGD:1600115
G Stat6 signal transducer and activator of transcription 6 JBrowse link 7 70,946,228 70,963,542 RGD:1624291
RGD:13792537
G Stk16 serine/threonine kinase 16 JBrowse link 9 82,411,010 82,414,249 RGD:727297
G Suz12 SUZ12 polycomb repressive complex 2 subunit JBrowse link 10 67,325,101 67,371,588 RGD:1624291
RGD:1600115
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor JBrowse link 5 133,864,401 133,878,604 RGD:1624291
G Tbp TATA box binding protein JBrowse link 1 57,491,381 57,509,335 RGD:1624291
RGD:13792537
G Tbpl1 TATA-box binding protein like 1 JBrowse link 1 23,977,154 24,002,512 RGD:1624291
RGD:13792537
G Tbpl2 TATA box binding protein-like 2 JBrowse link 3 1,095,883 1,116,677 RGD:13792537
G Tbr1 T-box brain transcription factor 1 JBrowse link 3 47,677,720 47,685,902 RGD:1624291
RGD:1600115
G Tbx15 T-box transcription factor 15 JBrowse link 2 201,289,042 201,390,752 RGD:1624291
RGD:1600115
G Tbx18 T-box transcription factor 18 JBrowse link 8 95,359,354 95,387,363 RGD:1624291
G Tbx19 T-box transcription factor 19 JBrowse link 13 83,403,263 83,426,305 RGD:1624291
G Tbx2 T-box transcription factor 2 JBrowse link 10 73,278,932 73,290,764 RGD:1624291
G Tbx20 T-box transcription factor 20 JBrowse link 8 25,849,394 25,904,570 RGD:1624291
RGD:1600115
G Tbx3 T-box transcription factor 3 JBrowse link 12 42,479,518 42,494,588 RGD:1624291
RGD:1600115
G Tbx5 T-box transcription factor 5 JBrowse link 12 42,059,688 42,148,226 RGD:1600115
RGD:1624291
G Tbxt T-box transcription factor T JBrowse link 1 52,887,067 52,900,691 RGD:1624291
RGD:1600115
G Tcf12 transcription factor 12 JBrowse link 8 78,343,634 78,657,738 RGD:1624291
RGD:13792537
G Tcf15 transcription factor 15 JBrowse link 3 147,643,250 147,649,511 RGD:1624291
RGD:1600115
G Tcf20 transcription factor 20 JBrowse link 7 123,670,135 123,767,797 RGD:1624291
G Tcf3 transcription factor 3 JBrowse link 7 12,146,642 12,168,400 RGD:1624291
RGD:13792537
G Tcf4 transcription factor 4 JBrowse link 18 65,285,320 65,507,983 RGD:1624291
RGD:13792537
G Tcf7 transcription factor 7 JBrowse link 10 37,616,033 37,646,027 RGD:1624291
RGD:13792537
G Tcf7l2 transcription factor 7 like 2 JBrowse link 1 276,686,911 276,730,517 RGD:1624291
RGD:1600115
G Tcfl5 transcription factor like 5 JBrowse link 3 176,124,846 176,144,531 RGD:1624291
RGD:1600115
G Tead1 TEA domain transcription factor 1 JBrowse link 1 177,495,500 177,714,795 RGD:1624291
RGD:1600115
G Tead4 TEA domain transcription factor 4 JBrowse link 4 161,542,566 161,619,848 RGD:1624291
G Tef TEF transcription factor, PAR bZIP family member JBrowse link 7 123,033,971 123,058,606 RGD:70036
G Tfap2a transcription factor AP-2 alpha JBrowse link 17 24,653,342 24,670,457 RGD:1624291
RGD:1600115
G Tfap2b transcription factor AP-2 beta JBrowse link 9 25,410,669 25,440,568 RGD:1600115
RGD:1624291
G Tfap2c transcription factor AP-2 gamma JBrowse link 3 170,550,314 170,558,197 RGD:1600115
RGD:1624291
G Tfap2e transcription factor AP-2 epsilon JBrowse link 5 144,740,950 144,761,787 RGD:1624291
RGD:1600115
G Tfap4 transcription factor AP-4 JBrowse link 10 11,204,616 11,222,975 RGD:1624291
G Tfcp2 transcription factor CP2 JBrowse link 7 142,138,836 142,181,036 RGD:1624291
RGD:1600115
G Tfe3 transcription factor binding to IGHM enhancer 3 JBrowse link X 15,574,579 15,587,826 RGD:1624291
RGD:1600115
G Tfeb transcription factor EB JBrowse link 9 15,208,141 15,264,101 RGD:1624291
G Tfec transcription factor EC JBrowse link 4 44,063,533 44,136,815 RGD:70037
G Tgif1 TGFB-induced factor homeobox 1 JBrowse link 9 119,181,079 119,190,698 RGD:1624291
RGD:1600115
G Thap1 THAP domain containing 1 JBrowse link 16 70,661,360 70,665,831 RGD:1624291
RGD:1600115
G Thap11 THAP domain containing 11 JBrowse link 19 37,825,576 37,827,393 RGD:1624291
RGD:13792537
G Tlx1 T-cell leukemia, homeobox 1 JBrowse link 1 264,893,033 264,899,424 RGD:1624291
RGD:1600115
G Top1 DNA topoisomerase I JBrowse link 3 156,635,688 156,717,686 RGD:1600115
RGD:1624291
G Tox2 TOX high mobility group box family member 2 JBrowse link 3 159,569,329 159,694,756 RGD:1624291
RGD:1600115
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:1624291
RGD:1600115
G Tp73 tumor protein p73 JBrowse link 5 171,355,876 171,415,354 RGD:1624291
RGD:1600115
G Tsc22d1 TSC22 domain family, member 1 JBrowse link 15 58,554,358 58,658,156 RGD:12911008
G Txk TXK tyrosine kinase JBrowse link 14 38,029,809 38,085,822 RGD:1624291
RGD:1600115
G Usf2 upstream transcription factor 2, c-fos interacting JBrowse link 1 89,371,798 89,383,005 RGD:634234
G Usp3 ubiquitin specific peptidase 3 JBrowse link 8 72,207,970 72,284,871 RGD:8657120
G Uty ubiquitously transcribed tetratricopeptide repeat gene, Y chromosome JBrowse link Y 1,065,274 1,206,127 RGD:1624291
G Vax1 ventral anterior homeobox 1 JBrowse link 1 280,334,897 280,338,813 RGD:13792537
G Vax2 ventral anterior homeobox 2 JBrowse link 4 115,388,839 115,412,515 RGD:13792537
G Wbp2 WW domain binding protein 2 JBrowse link 10 104,629,563 104,637,906 RGD:1600115
RGD:1624291
G Xbp1 X-box binding protein 1 JBrowse link 14 85,753,736 85,758,820 RGD:1600115
RGD:1624291
G Yap1 yes-associated protein 1 JBrowse link 8 6,133,014 6,204,240 RGD:1624291
RGD:1600115
G Ybx1 Y box binding protein 1 JBrowse link 5 138,319,754 138,336,721 RGD:1624291
G Yy1 YY1 transcription factor JBrowse link 6 132,702,443 132,726,848 RGD:1624291
RGD:13792537
G Yy2 YY2 transcription factor JBrowse link X 40,285,923 40,289,545 RGD:13792537
G Zbtb17 zinc finger and BTB domain containing 17 JBrowse link 5 159,993,799 160,014,899 RGD:1624291
RGD:1600115
G Zbtb2 zinc finger and BTB domain containing 2 JBrowse link 1 40,914,175 40,933,586 RGD:1624291
RGD:1600115
G Zbtb7a zinc finger and BTB domain containing 7a JBrowse link 7 11,429,266 11,446,119 RGD:1624291
RGD:13792537
RGD:1600115
G Zbtb7b zinc finger and BTB domain containing 7B JBrowse link 2 188,704,989 188,719,674 RGD:1624291
RGD:13792537
G Zfhx2 zinc finger homeobox 2 JBrowse link 15 33,719,313 33,752,665 RGD:13792537
G Zfhx3 zinc finger homeobox 3 JBrowse link 19 42,753,983 42,925,794 RGD:1624291
RGD:13792537
G Zfhx4 zinc finger homeobox 4 JBrowse link 2 98,423,565 98,610,368 RGD:13792537
G Zfp143 zinc finger protein 143 JBrowse link 1 174,702,310 174,738,133 RGD:1624291
RGD:1600115
G Zfp148 zinc finger protein 148 JBrowse link 11 70,509,909 70,618,422 RGD:1624291
RGD:1600115
G Zfp161 zinc finger protein 161 JBrowse link 9 117,739,067 117,744,273 RGD:1624291
RGD:1600115
G Zfp202 zinc finger protein 202 JBrowse link 8 44,047,586 44,068,990 RGD:1624291
RGD:1600115
G Zfp217 zinc finger protein 217 JBrowse link 3 166,981,419 167,022,349 RGD:1624291
RGD:1600115
G Zfp219 zinc finger protein 219 JBrowse link 15 28,402,412 28,417,379 RGD:1624291
RGD:1600115
G Zfp277 zinc finger protein 277 JBrowse link 6 60,246,209 60,374,388 RGD:1624291
G Zfp281 zinc finger protein 281 JBrowse link 13 53,531,080 53,534,399 RGD:1624291
RGD:1600115
G Zfp335 zinc finger protein 335 JBrowse link 3 161,357,201 161,378,073 RGD:1624291
RGD:1600115
G Zfp384 zinc finger protein 384 JBrowse link 4 157,523,083 157,552,606 RGD:1299381
G Zfp395 zinc finger protein 395 JBrowse link 15 48,789,320 48,803,025 RGD:1624291
RGD:1600115
G Zfp42 zinc finger protein 42 JBrowse link 16 52,016,590 52,026,346 RGD:1624291
G Zfp467 zinc finger protein 467 JBrowse link 4 78,068,822 78,077,962 RGD:1624291
G Zfp536 zinc finger protein 536 JBrowse link 1 93,689,114 94,155,457 RGD:1624291
G Zfp639 zinc finger protein 639 JBrowse link 2 118,906,479 118,917,491 RGD:1624291
RGD:1600115
G Zfp668 zinc finger protein 668 JBrowse link 1 199,310,935 199,321,231 RGD:1624291
RGD:1600115
G Zfp683 zinc finger protein 683 JBrowse link 5 152,280,982 152,288,208 RGD:1624291
G Zfp692 zinc finger protein 692 JBrowse link 10 43,740,739 43,752,713 RGD:1624291
RGD:1600115
G Zfp746 zinc finger protein 746 JBrowse link 4 77,723,182 77,747,511 RGD:1624291
G Zfpm1 zinc finger protein, multitype 1 JBrowse link 19 55,094,585 55,150,994 RGD:1624291
RGD:1600115
G Zgpat zinc finger CCCH-type and G-patch domain containing JBrowse link 3 176,865,078 176,881,603 RGD:1624291
RGD:1600115
G Zic1 Zic family member 1 JBrowse link 8 98,733,715 98,738,960 RGD:1624291
RGD:1600115
G Zic2 Zic family member 2 JBrowse link 15 108,908,366 108,913,812 RGD:1624291
G Zic3 Zic family member 3 JBrowse link X 140,875,191 140,888,344 RGD:1624291
RGD:1600115
G Zkscan3 zinc finger with KRAB and SCAN domains 3 JBrowse link 17 45,247,724 45,263,422 RGD:1624291
G Znf750 zinc finger protein 750 JBrowse link 10 110,698,581 110,701,222 RGD:1600115
RGD:1624291
G Zscan21 zinc finger and SCAN domain containing 21 JBrowse link 12 19,262,977 19,277,913 RGD:1624291
RGD:1600115
cAMP response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atf2 activating transcription factor 2 JBrowse link 3 60,721,137 60,795,951 RGD:727574
RGD:1624291
G Atf6 activating transcription factor 6 JBrowse link 13 89,053,457 89,242,531 RGD:1600115
G Atf6b activating transcription factor 6 beta JBrowse link 20 4,414,283 4,422,283 RGD:1600115
G Creb1 cAMP responsive element binding protein 1 JBrowse link 9 71,229,753 71,298,994 RGD:1624291
RGD:1600115
G Creb3 cAMP responsive element binding protein 3 JBrowse link 5 59,063,532 59,068,196 RGD:1600115
G Creb3l1 cAMP responsive element binding protein 3-like 1 JBrowse link 3 80,892,433 80,933,283 RGD:1624291
RGD:13792537
RGD:1600115
G Creb3l2 cAMP responsive element binding protein 3-like 2 JBrowse link 4 64,869,285 64,981,519 RGD:1624291
RGD:13792537
G Creb3l3 cAMP responsive element binding protein 3-like 3 JBrowse link 7 11,490,852 11,499,287 RGD:1600115
G Creb3l4 cAMP responsive element binding protein 3-like 4 JBrowse link 2 189,596,657 189,602,243 RGD:1600115
G E4f1 E4F transcription factor 1 JBrowse link 10 13,812,335 13,835,847 RGD:1624291
RGD:1600115
G Hmga2 high mobility group AT-hook 2 JBrowse link 7 65,159,944 65,275,408 RGD:1624291
RGD:1600115
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:1624291
RGD:1600115
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 JBrowse link 5 63,781,801 63,822,890 RGD:1600115
RGD:1624291
G Tcf12 transcription factor 12 JBrowse link 8 78,343,634 78,657,738 RGD:729997
carbohydrate response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mlxipl MLX interacting protein-like JBrowse link 12 24,590,645 24,619,639 RGD:8554541
E-box binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:1624291
RGD:1600115
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 1 178,039,002 178,137,469 RGD:1600115
RGD:1624291
G Arntl2 aryl hydrocarbon receptor nuclear translocator-like 2 JBrowse link 4 181,103,774 181,158,415 RGD:1624291
RGD:1600115
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 7 28,038,662 28,040,504 RGD:1624291
RGD:1600115
G Ascl2 achaete-scute family bHLH transcription factor 2 JBrowse link 1 216,154,002 216,156,409 RGD:1624291
RGD:1600115
G Atoh8 atonal bHLH transcription factor 8 JBrowse link 4 100,067,341 100,099,517 RGD:1624291
RGD:1600115
G Bhlhe40 basic helix-loop-helix family, member e40 JBrowse link 4 140,703,619 140,709,319 RGD:1600115
RGD:1624291
G Bhlhe41 basic helix-loop-helix family, member e41 JBrowse link 4 180,230,742 180,235,138 RGD:1624291
RGD:1600115
G Ciart circadian associated repressor of transcription JBrowse link 2 197,987,705 197,991,198 RGD:1624291
RGD:1600115
G Clock clock circadian regulator JBrowse link 14 34,418,226 34,502,218 RGD:1600115
RGD:1624291
G Cry1 cryptochrome circadian regulator 1 JBrowse link 7 24,534,593 24,634,098 RGD:1600115
RGD:1624291
G Gata3 GATA binding protein 3 JBrowse link 17 72,419,752 72,452,043 RGD:1624291
RGD:1600115
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link 16 36,371,489 36,373,551 RGD:1624291
RGD:1600115
G Hdac1 histone deacetylase 1 JBrowse link 5 147,716,664 147,743,723 RGD:1624291
G Hes1 hes family bHLH transcription factor 1 JBrowse link 11 74,312,837 74,315,249 RGD:9685170
RGD:13792537
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:1624291
RGD:1600115
G Lmo2 LIM domain only 2 JBrowse link 3 93,909,156 93,931,888 RGD:1624291
RGD:1600115
G Max MYC associated factor X JBrowse link 6 99,984,260 100,011,460 RGD:1624291
RGD:1600115
G Mitf melanocyte inducing transcription factor JBrowse link 4 130,172,484 130,425,496 RGD:1624291
RGD:1600115
G Mybbp1a MYB binding protein 1a JBrowse link 10 59,000,400 59,010,794 RGD:1600115
RGD:1624291
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:1624291
RGD:1600115
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:9686083
RGD:1624291
RGD:1600115
G Myog myogenin JBrowse link 13 51,126,459 51,129,048 RGD:1600115
RGD:1624291
G Neurod1 neuronal differentiation 1 JBrowse link 3 66,414,314 66,417,617 RGD:1624291
RGD:1600115
G Neurod2 neuronal differentiation 2 JBrowse link 10 86,280,865 86,282,681 RGD:1600115
RGD:1624291
G Neurog1 neurogenin 1 JBrowse link 17 9,154,656 9,156,175 RGD:1624291
RGD:1600115
G Neurog2 neurogenin 2 JBrowse link 2 231,962,517 231,963,441 RGD:1624291
G Nono non-POU domain containing, octamer-binding JBrowse link X 71,324,365 71,342,225 RGD:1600115
RGD:1624291
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 10 86,683,875 86,690,815 RGD:1600115
RGD:1624291
G Per1 period circadian regulator 1 JBrowse link 10 55,681,761 55,696,557 RGD:1624291
RGD:1600115
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:1600115
RGD:1624291
G Prmt5 protein arginine methyltransferase 5 JBrowse link 15 33,156,508 33,165,893 RGD:1624291
G Pspc1 paraspeckle component 1 JBrowse link 15 36,946,914 37,030,273 RGD:1600115
RGD:1624291
G Ptf1a pancreas associated transcription factor 1a JBrowse link 17 86,199,623 86,201,477 RGD:1624291
RGD:1600115
G Scx scleraxis bHLH transcription factor JBrowse link 7 117,519,075 117,521,093 RGD:1624291
RGD:1600115
G Sfpq splicing factor proline and glutamine rich JBrowse link 5 145,079,803 145,088,517 RGD:1624291
RGD:1600115
G Snai1 snail family transcriptional repressor 1 JBrowse link 3 164,274,710 164,279,199 RGD:1600115
RGD:1624291
G Snai2 snail family transcriptional repressor 2 JBrowse link 11 90,404,421 90,406,730 RGD:1624291
G Srebf2 sterol regulatory element binding transcription factor 2 JBrowse link 7 123,381,082 123,438,605 RGD:1624291
RGD:1600115
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor JBrowse link 5 133,864,401 133,878,604 RGD:1624291
RGD:1600115
G Tcf12 transcription factor 12 JBrowse link 8 78,343,634 78,657,738 RGD:1624291
RGD:1600115
G Tcf21 transcription factor 21 JBrowse link 1 23,906,717 23,909,576 RGD:1624291
RGD:1600115
G Tcf3 transcription factor 3 JBrowse link 7 12,146,642 12,168,400 RGD:8553796
RGD:1600115
RGD:1624291
G Tcf4 transcription factor 4 JBrowse link 18 65,285,320 65,507,983 RGD:1600115
RGD:1624291
G Tfap4 transcription factor AP-4 JBrowse link 10 11,204,616 11,222,975 RGD:1624291
RGD:1600115
G Twist1 twist family bHLH transcription factor 1 JBrowse link 6 53,401,241 53,403,235 RGD:1624291
RGD:1600115
G Zeb1 zinc finger E-box binding homeobox 1 JBrowse link 17 54,656,627 54,714,920 RGD:1600115
RGD:1624291
estrogen response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:1600115
RGD:1624291
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:728646
RGD:1624291
RGD:1600115
G Tox3 TOX high mobility group box family member 3 JBrowse link 19 18,079,022 18,188,366 RGD:1600115
RGD:1624291
G Trim24 tripartite motif-containing 24 JBrowse link 4 65,632,278 65,684,746 RGD:1624291
N-box binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bhlhe41 basic helix-loop-helix family, member e41 JBrowse link 4 180,230,742 180,235,138 RGD:1624291
G Hes1 hes family bHLH transcription factor 1 JBrowse link 11 74,312,837 74,315,249 RGD:9685391
RGD:13792537
RGD:1600115
RGD:1624291
retinoic acid-responsive element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Myt1l myelin transcription factor 1-like JBrowse link 6 48,452,385 48,843,443 RGD:633486
RGD:12793025
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 JBrowse link 2 5,569,954 5,579,894 RGD:633499
G Rara retinoic acid receptor, alpha JBrowse link 10 86,838,819 86,884,224 RGD:1624291
RGD:1600115
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:1600115
RGD:13792537
RGD:1624291
G Rxrb retinoid X receptor beta JBrowse link 20 3,822,673 3,829,138 RGD:13792537
G Rxrg retinoid X receptor gamma JBrowse link 13 85,818,473 85,868,555 RGD:13792537
G Zfp536 zinc finger protein 536 JBrowse link 1 93,689,114 94,155,457 RGD:1624291
RGD:1600115
RNA polymerase II proximal promoter sequence-specific DNA binding, bending term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cebpg CCAAT/enhancer binding protein gamma JBrowse link 1 91,286,956 91,297,459 RGD:69946
serum response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx2-5 NK2 homeobox 5 JBrowse link 10 16,635,989 16,638,758 RGD:1624291
RGD:1600115
G Srf serum response factor JBrowse link 9 16,737,637 16,747,226 RGD:1624291
RGD:1600115
sterol response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 JBrowse link 3 80,004,130 80,014,197 RGD:1624291
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link 10 46,570,996 46,593,021 RGD:1624291
RGD:8553473
vitamin D response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:1624291
RGD:1600115
G Tcf3 transcription factor 3 JBrowse link 7 12,146,642 12,168,400 RGD:1624291
RGD:1600115
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:1624291
RGD:13792537
RGD:1600115

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18465
    binding 15221
      organic cyclic compound binding 5377
        nucleic acid binding 3294
          regulatory region nucleic acid binding 993
            transcription regulatory region DNA binding 989
              transcription regulatory region sequence-specific DNA binding 879
                RNA polymerase II regulatory region sequence-specific DNA binding 837
                  RNA polymerase II proximal promoter sequence-specific DNA binding 576
                    E-box binding 47
                    N-box binding 2
                    RNA polymerase II proximal promoter sequence-specific DNA binding, bending 1
                    cAMP response element binding 14
                    carbohydrate response element binding 1
                    estrogen response element binding 4
                    juvenile hormone response element binding 0
                    retinoic acid-responsive element binding 7
                    serum response element binding 2
                    sterol response element binding 2
                    vitamin D response element binding 3
Path 2
Term Annotations click to browse term
  molecular_function 18465
    binding 15221
      organic cyclic compound binding 5377
        nucleic acid binding 3294
          DNA binding 1939
            sequence-specific DNA binding 1175
              sequence-specific double-stranded DNA binding 922
                transcription regulatory region sequence-specific DNA binding 879
                  proximal promoter sequence-specific DNA binding 592
                    RNA polymerase II proximal promoter sequence-specific DNA binding 576
                      E-box binding 47
                      N-box binding 2
                      RNA polymerase II proximal promoter sequence-specific DNA binding, bending 1
                      cAMP response element binding 14
                      carbohydrate response element binding 1
                      estrogen response element binding 4
                      juvenile hormone response element binding 0
                      retinoic acid-responsive element binding 7
                      serum response element binding 2
                      sterol response element binding 2
                      vitamin D response element binding 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.