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ONTOLOGY REPORT - ANNOTATIONS


Term:RNA polymerase II regulatory region sequence-specific DNA binding
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Accession:GO:0000977 term browser browse the term
Definition:Interacting selectively and non-covalently with a specific sequence of DNA that is part of a regulatory region that controls the transcription of a gene or cistron by RNA polymerase II.
Comment:The word "promoter" is used variously in the literature to describe the core promoter specifically or the entire proximal regulatory region (excluding any distal enhancers) including both the core promoter and the upstream region where activating transcription factors such as Gal4 in S. cerevisiae or catabolite activator protein (CAP) in E. coli bind. To minimize ambiguity in the use of the word "promoter" in GO, we have chosen the phrase "transcription regulatory region" in order to refer to all of the regulatory regions. Regulatory regions in the DNA which control initiation may include the "core promoter" where the basal transcription machinery binds, the "core promoter proximal region" where regulatory factors other than the basal machinery bind, and "enhancer" regions which are typically more distal from the core promoter. There are also additional regulatory regions, in both the DNA and the RNA transcript, which regulate elongation or termination of transcription. ANNOTATION NOTE: Regarding annotation to "transcription regulatory region DNA binding" (GO:0044212) and any of its is_a children, note that annotation to these terms specifies DNA binding only without any statement about transcription factor activity. To make an annotation about a function of transcription factor activity, consider "sequence-specific DNA-binding transcription factor activity" (GO:0003700) or its is_a children which have has_part relationships to the appropriate kind of "transcription regulatory region DNA binding".


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RNA polymerase II regulatory region sequence-specific DNA binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actn4 actinin alpha 4 JBrowse link NW_004955468 770,573 841,859 RGD:9068941
G Aebp1 AE binding protein 1 JBrowse link NW_004955456 7,860,191 7,868,526 RGD:9068941
G Aire autoimmune regulator JBrowse link NW_004955407 41,157,503 41,165,032 RGD:9068941
G Alx3 ALX homeobox 3 JBrowse link NW_004955435 13,584,129 13,594,316 RGD:9068941
G Alx4 ALX homeobox 4 JBrowse link NW_004955422 3,278,615 3,290,799 RGD:9068941
G Arid3a AT-rich interaction domain 3A JBrowse link NW_004955495 6,884,077 6,912,625 RGD:9068941
G Arid3b AT-rich interaction domain 3B JBrowse link NW_004955450 3,272,820 3,318,820 RGD:9068941
G Arid3c AT-rich interaction domain 3C JBrowse link NW_004955472 1,503,448 1,510,965 RGD:9068941
G Arid5b AT-rich interaction domain 5B JBrowse link NW_004955425 15,253,951 15,433,246 RGD:9068941
G Arx aristaless related homeobox JBrowse link NW_004955509 5,326,145 5,338,250 RGD:9068941
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link NW_004955405 37,941,243 37,943,641 RGD:9068941
G Ascl2 achaete-scute family bHLH transcription factor 2 JBrowse link NW_004955422 14,051,140 14,053,521 RGD:9068941
G Ascl3 achaete-scute family bHLH transcription factor 3 JBrowse link NW_004955414 24,688,233 24,691,361 RGD:9068941
G Ascl5 achaete-scute family bHLH transcription factor 5 JBrowse link NW_004955406 37,264,753 37,265,337 RGD:9068941
G Atf1 activating transcription factor 1 JBrowse link NW_004955547 1,263,288 1,299,525 RGD:9068941
G Atf2 activating transcription factor 2 JBrowse link NW_004955449 332,563 411,218 RGD:9068941
G Atf3 activating transcription factor 3 JBrowse link NW_004955406 4,875,672 4,889,173 RGD:9068941
G Atf4 activating transcription factor 4 JBrowse link NW_004955413 25,406,589 25,408,727 RGD:9068941
G Atf5 activating transcription factor 5 JBrowse link NW_004955559 1,008,208 1,013,023 RGD:9068941
G Atf6 activating transcription factor 6 JBrowse link NW_004955462 14,352,956 14,553,299 RGD:9068941
G Barhl1 BarH like homeobox 1 JBrowse link NW_004955513 1,955,906 1,970,110 RGD:9068941
G Barhl2 BarH like homeobox 2 JBrowse link NW_004955423 3,516,973 3,522,459 RGD:9068941
G Barx1 BARX homeobox 1 JBrowse link NW_004955515 4,230,713 4,234,189 RGD:9068941
G Barx2 BARX homeobox 2 JBrowse link NW_004955412 30,345,837 30,418,186 RGD:9068941
G Bcl6 BCL6 transcription repressor JBrowse link NW_004955420 19,998,960 20,021,200 RGD:9068941
G Bcl6b BCL6B transcription repressor JBrowse link NW_004955467 9,900,392 9,906,610 RGD:9068941
G Bcor BCL6 corepressor JBrowse link NW_004955566 1,412,540 1,510,339 RGD:9068941
G Bhlha15 basic helix-loop-helix family member a15 JBrowse link NW_004955460 14,103,053 14,106,714 RGD:9068941
G Bhlha9 basic helix-loop-helix family member a9 JBrowse link NW_004955481 2,769,023 2,770,269 RGD:9068941
G Bhlhe40 basic helix-loop-helix family member e40 JBrowse link NW_004955421 8,463,337 8,468,877 RGD:9068941
G Bhlhe41 basic helix-loop-helix family member e41 JBrowse link NW_004955413 21,100,021 21,103,358 RGD:9068941
G Cdc5l cell division cycle 5 like JBrowse link NW_004955437 9,990,613 10,032,034 RGD:9068941
G Cdx1 caudal type homeobox 1 JBrowse link NW_004955415 4,337,903 4,355,782 RGD:9068941
G Cdx2 caudal type homeobox 2 JBrowse link NW_004955497 7,316,372 7,321,627 RGD:9068941
G Cebpb CCAAT enhancer binding protein beta JBrowse link NW_004955445 8,060,432 8,061,289 RGD:9068941
G Cggbp1 CGG triplet repeat binding protein 1 JBrowse link NW_004955407 5,434,954 5,443,713 RGD:9068941
G Cnbp CCHC-type zinc finger nucleic acid binding protein JBrowse link NW_004955429 13,537,222 13,582,026 RGD:9068941
G Creb3 cAMP responsive element binding protein 3 JBrowse link NW_004955472 564,227 568,708 RGD:9068941
G Creb3l3 cAMP responsive element binding protein 3 like 3 JBrowse link NW_004955495 4,651,086 4,670,852 RGD:9068941
G Crebrf CREB3 regulatory factor JBrowse link NW_004955408 25,718,523 25,769,551 RGD:9068941
G Crem cAMP responsive element modulator JBrowse link NW_004955462 2,491,504 2,547,587 RGD:9068941
G Cux1 cut like homeobox 1 JBrowse link NW_004955456 15,292,562 15,636,835 RGD:9068941
G Cux2 cut like homeobox 2 JBrowse link NW_004955482 7,783,483 8,045,808 RGD:9068941
G Dach1 dachshund family transcription factor 1 JBrowse link NW_004955404 34,739,780 35,118,037 RGD:9068941
G Dbp D-box binding PAR bZIP transcription factor JBrowse link NW_004955559 1,915,424 1,921,322 RGD:9068941
G Deaf1 DEAF1 transcription factor JBrowse link NW_004955476 11,398,187 11,422,633 RGD:9068941
G Dmbx1 diencephalon/mesencephalon homeobox 1 JBrowse link NW_004955464 11,788,526 11,811,885 RGD:9068941
G Dmrt1 doublesex and mab-3 related transcription factor 1 JBrowse link NW_004955434 5,341,519 5,448,049 RGD:9068941
G Dmrt2 doublesex and mab-3 related transcription factor 2 JBrowse link NW_004955434 5,528,625 5,535,783 RGD:9068941
G Drgx dorsal root ganglia homeobox JBrowse link NW_004955556 842,714 870,248 RGD:9068941
G Duxb double homeobox B JBrowse link NW_004955510 120,981 140,525 RGD:9068941
G E2f2 E2F transcription factor 2 JBrowse link NW_004955452 3,498,077 3,518,033 RGD:9068941
G E2f3 E2F transcription factor 3 JBrowse link NW_004955483 6,039,569 6,116,000 RGD:9068941
G E2f6 E2F transcription factor 6 JBrowse link NW_004955487 6,014,476 6,029,090 RGD:9068941
G E4f1 E4F transcription factor 1 JBrowse link NW_004955442 15,031,210 15,041,437 RGD:9068941
G Eaf2 ELL associated factor 2 JBrowse link NW_004955427 21,171,900 21,204,138 RGD:9068941
G Ebf4 EBF family member 4 JBrowse link NW_004955415 13,673,700 13,734,344 RGD:9068941
G Egr1 early growth response 1 JBrowse link NW_004955418 2,001,509 2,005,269 RGD:9068941
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link NW_004955437 396,736 411,144 RGD:9068941
G Elf5 E74 like ETS transcription factor 5 JBrowse link NW_004955422 11,751,073 11,779,313 RGD:9068941
G Eno1 enolase 1 JBrowse link NW_004955486 4,275,371 4,287,152 RGD:9068941
G Eomes eomesodermin JBrowse link NW_004955430 19,280,460 19,287,060 RGD:9068941
G Ep300 E1A binding protein p300 JBrowse link NW_004955413 26,647,553 26,727,875 RGD:9068941
G Esrrg estrogen related receptor gamma JBrowse link NW_004955406 1,260,240 1,784,652 RGD:9068941
G Esx1 ESX homeobox 1 JBrowse link NW_004955548 1,087,441 1,095,070 RGD:9068941
G Etv5 ETS variant transcription factor 5 JBrowse link NW_004955420 21,503,820 21,576,539 RGD:9068941
G Etv6 ETS variant transcription factor 6 JBrowse link NW_004955413 8,698,412 8,912,011 RGD:9068941
G Ferd3l Fer3 like bHLH transcription factor JBrowse link NW_004955410 22,034,413 22,034,978 RGD:9068941
G Fezf2 FEZ family zinc finger 2 JBrowse link NW_004955517 3,439,999 3,443,477 RGD:9068941
G Figla folliculogenesis specific bHLH transcription factor JBrowse link NW_004955424 14,393,566 14,402,971 RGD:9068941
G Fosl2 FOS like 2, AP-1 transcription factor subunit JBrowse link NW_004955469 10,297,179 10,319,180 RGD:9068941
G Foxf1 forkhead box F1 JBrowse link NW_004955541 1,341,715 1,345,397 RGD:9068941
G Foxf2 forkhead box F2 JBrowse link NW_004955465 11,740,374 11,744,619 RGD:9068941
G Foxk1 forkhead box K1 JBrowse link NW_004955460 11,011,498 11,067,443 RGD:9068941
G Foxm1 forkhead box M1 JBrowse link NW_004955429 18,392,545 18,405,254 RGD:9068941
G Gata1 GATA binding protein 1 JBrowse link NW_004955543 334,581 342,042 RGD:9068941
G Gata4 GATA binding protein 4 JBrowse link NW_004955403 52,958,318 53,029,267 RGD:9068941
G Gbx1 gastrulation brain homeobox 1 JBrowse link NW_004955491 5,575,836 5,592,804 RGD:9068941
G Gbx2 gastrulation brain homeobox 2 JBrowse link NW_004955453 538,066 541,415 RGD:9068941
G Gli1 GLI family zinc finger 1 JBrowse link NW_004955458 5,181,761 5,193,500 RGD:9068941
G Gli2 GLI family zinc finger 2 JBrowse link NW_004955459 8,892,917 9,124,672 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004955460 1,528,457 1,805,584 RGD:9068941
G Glis1 GLIS family zinc finger 1 JBrowse link NW_004955464 5,495,528 5,680,114 RGD:9068941
G Glis2 GLIS family zinc finger 2 JBrowse link NW_004955442 13,097,636 13,113,514 RGD:9068941
G Glis3 GLIS family zinc finger 3 JBrowse link NW_004955434 8,140,965 8,581,889 RGD:9068941
G Hand1 heart and neural crest derivatives expressed 1 JBrowse link NW_004955408 8,848,723 8,851,804 RGD:9068941
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link NW_004955403 33,478,034 33,481,613 RGD:9068941
G Helt helt bHLH transcription factor JBrowse link NW_004955403 23,996,488 23,998,290 RGD:9068941
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004955420 14,565,921 14,568,447 RGD:9068941
G Hes2 hes family bHLH transcription factor 2 JBrowse link NW_004955486 6,158,863 6,161,289 RGD:9068941
G Hes3 hes family bHLH transcription factor 3 JBrowse link NW_004955486 6,272,757 6,273,721 RGD:9068941
G Hes5 hes family bHLH transcription factor 5 JBrowse link NW_004955486 8,700,212 8,701,581 RGD:9068941
G Hes6 hes family bHLH transcription factor 6 JBrowse link NW_004955542 2,373,241 2,374,827 RGD:9068941
G Hes7 hes family bHLH transcription factor 7 JBrowse link NW_004955467 8,837,895 8,841,062 RGD:9068941
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 JBrowse link NW_004955444 1,498,444 1,502,099 RGD:9068941
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 JBrowse link NW_004955436 7,060,930 7,070,610 RGD:9068941
G Heyl hes related family bHLH transcription factor with YRPW motif like JBrowse link NW_004955452 17,137,066 17,152,714 RGD:9068941
G Hhex hematopoietically expressed homeobox JBrowse link NW_004955425 737,506 742,775 RGD:9068941
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link NW_004955466 8,000,311 8,022,497 RGD:9068941
G Hlf HLF transcription factor, PAR bZIP family member JBrowse link NW_004955451 7,309,895 7,364,166 RGD:9068941
G Hmx1 H6 family homeobox 1 JBrowse link NW_004955514 2,441,234 2,442,478 RGD:9068941
G Hmx3 H6 family homeobox 3 JBrowse link NW_004955477 1,288,484 1,290,205 RGD:9068941
G Hnf1a HNF1 homeobox A JBrowse link NW_004955455 10,694,102 10,717,613 RGD:9068941
G Hnf1b HNF1 homeobox B JBrowse link NW_004955451 320,283 371,420 RGD:9068941
G Hnf4a hepatocyte nuclear factor 4 alpha JBrowse link NW_004955445 12,925,248 12,962,501 RGD:9068941
G Hnf4g hepatocyte nuclear factor 4 gamma JBrowse link NW_004955444 5,081,013 5,157,988 RGD:9068941
G Hoxa4 homeobox A4 JBrowse link NW_004955410 28,822,814 28,827,294 RGD:9068941
G Hoxb1 homeobox B1 JBrowse link NW_004955451 12,707,560 12,708,950 RGD:9068941
G Hoxb4 homeobox B4 JBrowse link NW_004955451 12,661,290 12,665,576 RGD:9068941
G Hoxc10 homeobox C10 JBrowse link NW_004955458 1,243,529 1,248,653 RGD:9068941
G Hoxc4 homeobox C4 JBrowse link NW_004955458 1,251,601 1,313,291 RGD:9068941
G Hoxd10 homeobox D10 JBrowse link NW_004955403 20,543,224 20,548,801 RGD:9068941
G Hoxd3 homeobox D3 JBrowse link NW_004955403 20,489,663 20,496,021 RGD:9068941
G Hoxd4 homeobox D4 JBrowse link NW_004955403 20,510,364 20,526,564 RGD:9068941
G Hoxd8 homeobox D8 JBrowse link NW_004955403 20,530,536 20,532,580 RGD:9068941
G Hoxd9 homeobox D9 JBrowse link NW_004955451 12,619,722 12,621,320 RGD:9068941
G Hsf2 heat shock transcription factor 2 JBrowse link NW_004955436 4,387,498 4,406,719 RGD:9068941
G Ier2 immediate early response 2 JBrowse link NW_004955415 32,159,762 32,161,530 RGD:9068941
G Ikzf3 IKAROS family zinc finger 3 JBrowse link NW_004955451 14,483,669 14,571,108 RGD:9068941
G Ikzf5 IKAROS family zinc finger 5 JBrowse link NW_004955477 1,160,183 1,177,597 RGD:9068941
G Irf2 interferon regulatory factor 2 JBrowse link NW_004955403 24,433,334 24,517,618 RGD:9068941
G Isx intestine specific homeobox JBrowse link NW_004955405 42,979,063 43,015,561 RGD:9068941
G Jarid2 jumonji and AT-rich interaction domain containing 2 JBrowse link NW_004955590 383,810 512,854 RGD:9068941
G Kat2b lysine acetyltransferase 2B JBrowse link NW_004955430 12,109,493 12,196,102 RGD:9068941
G Klf12 Kruppel like factor 12 JBrowse link NW_004955404 32,715,636 33,127,525 RGD:9068941
G Klf15 Kruppel like factor 15 JBrowse link NW_004955421 21,609,709 21,618,920 RGD:9068941
G Klf3 Kruppel like factor 3 JBrowse link NW_004955443 8,526,371 8,549,510 RGD:9068941
G Klf8 Kruppel like factor 8 JBrowse link NW_004955475 2,938,071 2,998,435 RGD:9068941
G Lef1 lymphoid enhancer binding factor 1 JBrowse link NW_004955496 1,728,840 1,827,749 RGD:9068941
G Lhx1 LIM homeobox 1 JBrowse link NW_004955451 1,037,936 1,048,501 RGD:9068941
G Lhx2 LIM homeobox 2 JBrowse link NW_004955419 3,999,364 4,019,543 RGD:9068941
G Lhx3 LIM homeobox 3 JBrowse link NW_004955513 4,464,149 4,470,962 RGD:9068941
G Lhx4 LIM homeobox 4 JBrowse link NW_004955406 19,457,658 19,470,875 RGD:9068941
G Lhx5 LIM homeobox 5 JBrowse link NW_004955482 9,682,671 9,691,155 RGD:9068941
G Lhx6 LIM homeobox 6 JBrowse link NW_004955419 5,835,230 5,858,096 RGD:9068941
G Lhx8 LIM homeobox 8 JBrowse link NW_004955423 17,644,691 17,668,969 RGD:9068941
G Lhx9 LIM homeobox 9 JBrowse link NW_004955406 34,341,972 34,363,351 RGD:9068941
G Lin54 lin-54 DREAM MuvB core complex component JBrowse link NW_004955474 6,600,766 6,660,904 RGD:9068941
G Lmo2 LIM domain only 2 JBrowse link NW_004955422 12,354,865 12,362,026 RGD:9068941
G Lmx1a LIM homeobox transcription factor 1 alpha JBrowse link NW_004955462 11,328,583 11,484,438 RGD:9068941
G Lmx1b LIM homeobox transcription factor 1 beta JBrowse link NW_004955419 1,782,566 1,857,375 RGD:9068941
G LOC102008188 core histone macro-H2A.1 JBrowse link NW_004955408 30,497,531 30,550,095 RGD:9068941
G LOC102017503 core histone macro-H2A.2 JBrowse link NW_004955437 21,126,581 21,186,308 RGD:9068941
G Lyl1 LYL1 basic helix-loop-helix family member JBrowse link NW_004955415 32,121,808 32,124,730 RGD:9068941
G Macc1 MET transcriptional regulator MACC1 JBrowse link NW_004955410 22,777,518 22,894,561 RGD:9068941
G Max MYC associated factor X JBrowse link NW_004955466 4,816,568 4,842,659 RGD:9068941
G Mef2a myocyte enhancer factor 2A JBrowse link NW_004955416 26,926,753 27,051,171 RGD:9068941
G Mef2b myocyte enhancer factor 2B JBrowse link NW_004955524 2,649,413 2,664,173 RGD:9068941
G Mef2c myocyte enhancer factor 2C JBrowse link NW_004955418 22,537,388 22,701,434 RGD:9068941
G Mef2d myocyte enhancer factor 2D JBrowse link NW_004955545 2,569,399 2,602,580 RGD:9068941
G Mga MAX dimerization protein MGA JBrowse link NW_004955416 8,416,236 8,566,371 RGD:9068941
G Mlx MAX dimerization protein MLX JBrowse link NW_004955451 16,460,737 16,464,529 RGD:9068941
G Mlxip MLX interacting protein JBrowse link NW_004955482 6,410,182 6,456,582 RGD:9068941
G Mnt MAX network transcriptional repressor JBrowse link NW_004955481 852,539 866,731 RGD:9068941
G Msc musculin JBrowse link NW_004955444 8,064,867 8,067,381 RGD:9068941
G Msx1 msh homeobox 1 JBrowse link NW_004955514 4,923,552 4,927,471 RGD:9068941
G Msx2 msh homeobox 2 JBrowse link NW_004955408 27,323,405 27,329,484 RGD:9068941
G Mtf1 metal regulatory transcription factor 1 JBrowse link NW_004955452 15,580,460 15,627,844 RGD:9068941
G Mtf2 metal response element binding transcription factor 2 JBrowse link NW_004955423 1,469,498 1,534,082 RGD:9068941
G Mxd3 MAX dimerization protein 3 JBrowse link NW_004955408 29,555,028 29,560,589 RGD:9068941
G Mxi1 MAX interactor 1, dimerization protein JBrowse link NW_004955485 1,088,175 1,156,521 RGD:9068941
G Myod1 myogenic differentiation 1 JBrowse link NW_004955414 32,523,959 32,526,575 RGD:9068941
G Myog myogenin JBrowse link NW_004955406 39,099,044 39,102,479 RGD:9068941
G Nanog Nanog homeobox JBrowse link NW_004955413 6,561,323 6,565,770 RGD:9068941
G Nfil3 nuclear factor, interleukin 3 regulated JBrowse link NW_004955515 908,313 910,159 RGD:9068941
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link NW_004955496 5,842,734 5,950,995 RGD:9068941
G Nfkb2 nuclear factor kappa B subunit 2 JBrowse link NW_004955485 7,994,730 8,001,776 RGD:9068941
G Nfx1 nuclear transcription factor, X-box binding 1 JBrowse link NW_004955472 2,306,961 2,371,597 RGD:9068941
G Nfxl1 nuclear transcription factor, X-box binding like 1 JBrowse link NW_004955443 665,235 714,627 RGD:9068941
G Nhlh1 nescient helix-loop-helix 1 JBrowse link NW_004955468 12,133,717 12,137,700 RGD:9068941
G Nhlh2 nescient helix-loop-helix 2 JBrowse link NW_004955435 19,070,715 19,073,678 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004955409 24,612,490 24,616,360 RGD:9068941
G Nkx2-6 NK2 homeobox 6 JBrowse link NW_004955403 46,831,758 46,836,358 RGD:9068941
G Nr1d1 nuclear receptor subfamily 1 group D member 1 JBrowse link NW_004955451 14,743,763 14,750,903 RGD:9068941
G Nr1d2 nuclear receptor subfamily 1 group D member 2 JBrowse link NW_004955430 15,812,449 15,834,341 RGD:9068941
G Nr1h2 nuclear receptor subfamily 1 group H member 2 JBrowse link NW_004955559 731,630 736,973 RGD:9068941
G Nr1h3 nuclear receptor subfamily 1 group H member 3 JBrowse link NW_004955422 940,310 954,170 RGD:9068941
G Nr1h4 nuclear receptor subfamily 1 group H member 4 JBrowse link NW_004955405 36,160,360 36,236,258 RGD:9068941
G Nr1i2 nuclear receptor subfamily 1 group I member 2 JBrowse link NW_004955427 19,459,936 19,487,276 RGD:9068941
G Nr1i3 nuclear receptor subfamily 1 group I member 3 JBrowse link NW_004955468 12,985,105 13,002,850 RGD:9068941
G Nr2c1 nuclear receptor subfamily 2 group C member 1 JBrowse link NW_004955405 31,637,832 31,693,621 RGD:9068941
G Nr2c2 nuclear receptor subfamily 2 group C member 2 JBrowse link NW_004955429 17,386,190 17,430,820 RGD:9068941
G Nr2e1 nuclear receptor subfamily 2 group E member 1 JBrowse link NW_004955411 33,303,765 33,325,221 RGD:9068941
G Nr2e3 nuclear receptor subfamily 2 group E member 3 JBrowse link NW_004955450 5,281,707 5,286,260 RGD:9068941
G Nr2f1 nuclear receptor subfamily 2 group F member 1 JBrowse link NW_004955418 18,615,548 18,622,984 RGD:9068941
G Nr2f2 nuclear receptor subfamily 2 group F member 2 JBrowse link NW_004955416 24,148,052 24,154,406 RGD:9068941
G Nr2f6 nuclear receptor subfamily 2 group F member 6 JBrowse link NW_004955524 961,232 965,012 RGD:9068941
G Nr3c1 nuclear receptor subfamily 3 group C member 1 JBrowse link NW_004955415 10,494,704 10,585,778 RGD:9068941
G Nr4a1 nuclear receptor subfamily 4 group A member 1 JBrowse link NW_004955547 2,404,532 2,426,882 RGD:9068941
G Nr4a2 nuclear receptor subfamily 4 group A member 2 JBrowse link NW_004955449 16,928,780 16,944,536 RGD:9068941
G Nr4a3 nuclear receptor subfamily 4 group A member 3 JBrowse link NW_004955419 25,779,368 25,817,445 RGD:9068941
G Nr5a1 nuclear receptor subfamily 5 group A member 1 JBrowse link NW_004955419 3,632,248 3,654,367 RGD:9068941
G Onecut3 one cut homeobox 3 JBrowse link NW_004955495 6,246,855 6,267,989 RGD:9068941
G Osr1 odd-skipped related transcription factor 1 JBrowse link NW_004955469 1,954,470 1,961,344 RGD:9068941
G Osr2 odd-skipped related transciption factor 2 JBrowse link NW_004955417 14,502,450 14,510,015 RGD:9068941
G Parp1 poly(ADP-ribose) polymerase 1 JBrowse link NW_004955489 520,875 557,609 RGD:9068941
G Patz1 POZ/BTB and AT hook containing zinc finger 1 JBrowse link NW_004955455 5,544,841 5,566,630 RGD:9068941
G Pax9 paired box 9 JBrowse link NW_004955409 24,401,599 24,443,687 RGD:9068941
G Pbx1 PBX homeobox 1 JBrowse link NW_004955462 11,777,168 12,083,068 RGD:9068941
G Pbx2 PBX homeobox 2 JBrowse link NW_004955437 648,935 654,008 RGD:9068941
G Pcgf3 polycomb group ring finger 3 JBrowse link NW_004955514 307,331 350,039 RGD:9068941
G Pcgf5 polycomb group ring finger 5 JBrowse link NW_004955425 1,913,711 1,980,800 RGD:9068941
G Pcgf6 polycomb group ring finger 6 JBrowse link NW_004955485 7,196,626 7,228,918 RGD:9068941
G Phox2a paired like homeobox 2A JBrowse link NW_004955414 19,141,589 19,145,486 RGD:9068941
G Phox2b paired like homeobox 2B JBrowse link NW_004955443 5,935,975 5,938,747 RGD:9068941
G Pknox2 PBX/knotted 1 homeobox 2 JBrowse link NW_004955412 26,214,671 26,468,737 RGD:9068941
G Plagl1 PLAG1 like zinc finger 1 JBrowse link NW_004955436 16,452,797 16,511,872 RGD:9068941
G Pou3f4 POU class 3 homeobox 4 JBrowse link NW_004955529 2,726,121 2,727,311 RGD:9068941
G Pou6f1 POU class 6 homeobox 1 JBrowse link NW_004955547 1,685,365 1,712,028 RGD:9068941
G Ppara peroxisome proliferator activated receptor alpha JBrowse link NW_004955413 30,306,563 30,366,245 RGD:9068941
G Ppard peroxisome proliferator activated receptor delta JBrowse link NW_004955437 3,285,281 3,354,099 RGD:9068941
G Pparg peroxisome proliferator activated receptor gamma JBrowse link NW_004955429 14,814,690 14,936,869 RGD:9068941
G Prdm1 PR/SET domain 1 JBrowse link NW_004955411 31,434,503 31,455,995 RGD:9068941
G Prdm11 PR/SET domain 11 JBrowse link NW_004955422 2,616,410 2,655,381 RGD:9068941
G Prdm12 PR/SET domain 12 JBrowse link NW_004955513 612,566 627,848 RGD:9068941
G Prdm13 PR/SET domain 13 JBrowse link NW_004955411 25,481,601 25,489,049 RGD:9068941
G Prdm14 PR/SET domain 14 JBrowse link NW_004955444 9,606,310 9,626,772 RGD:9068941
G Prdm2 PR/SET domain 2 JBrowse link NW_004955527 4,005,410 4,105,376 RGD:9068941
G Prdm4 PR/SET domain 4 JBrowse link NW_004955405 41,335,019 41,354,625 RGD:9068941
G Prdm5 PR/SET domain 5 JBrowse link NW_004955428 19,684,721 19,881,716 RGD:9068941
G Ptf1a pancreas associated transcription factor 1a JBrowse link NW_004955429 5,807,804 5,809,522 RGD:9068941
G Pura purine rich element binding protein A JBrowse link NW_004955418 538,883 548,605 RGD:9068941
G Purb purine rich element binding protein B JBrowse link NW_004955456 7,322,973 7,323,529 RGD:9068941
G Purg purine rich element binding protein G JBrowse link NW_004955463 7,460,533 7,495,106 RGD:9068941
G Rara retinoic acid receptor alpha JBrowse link NW_004955451 14,876,663 14,917,134 RGD:9068941
G Rarb retinoic acid receptor beta JBrowse link NW_004955430 17,067,536 17,457,558 RGD:9068941
G Rarg retinoic acid receptor gamma JBrowse link NW_004955458 480,257 501,172 RGD:9068941
G Rel REL proto-oncogene, NF-kB subunit JBrowse link NW_004955424 22,909,035 22,939,651 RGD:9068941
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link NW_004955422 19,602,930 19,612,263 RGD:9068941
G Relb RELB proto-oncogene, NF-kB subunit JBrowse link NW_004955555 2,060,533 2,086,229 RGD:9068941
G Rfx6 regulatory factor X6 JBrowse link NW_004955436 213,810 278,699 RGD:9068941
G Rhoxf1 Rhox homeobox family member 1 JBrowse link NW_004955534 39,060 39,570 RGD:9068941
G Rora RAR related orphan receptor A JBrowse link NW_004955450 14,262,199 14,434,611 RGD:9068941
G Rps3 ribosomal protein S3 JBrowse link NW_004955414 16,436,899 16,442,325 RGD:9068941
G Rreb1 ras responsive element binding protein 1 JBrowse link NW_004955465 6,572,593 6,757,423 RGD:9068941
G Runx1 RUNX family transcription factor 1 JBrowse link NW_004955407 34,108,653 34,342,657 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004955452 4,580,444 4,606,820 RGD:9068941
G Rxra retinoid X receptor alpha JBrowse link NW_004955513 3,313,544 3,386,544 RGD:9068941
G Rxrb retinoid X receptor beta JBrowse link NW_004955437 1,767,833 1,774,401 RGD:9068941
G Rxrg retinoid X receptor gamma JBrowse link NW_004955462 11,238,963 11,281,905 RGD:9068941
G Sall2 spalt like transcription factor 2 JBrowse link NW_004955550 2,236,129 2,250,829 RGD:9068941
G Satb1 SATB homeobox 1 JBrowse link NW_004955430 10,587,539 10,683,887 RGD:9068941
G Satb2 SATB homeobox 2 JBrowse link NW_004955403 1,663,676 1,811,088 RGD:9068941
G Scrt1 scratch family transcriptional repressor 1 JBrowse link NW_004955454 2,948,137 2,953,955 RGD:9068941
G Scrt2 scratch family transcriptional repressor 2 JBrowse link NW_004955597 504,160 515,609 RGD:9068941
G Scx scleraxis bHLH transcription factor JBrowse link NW_004955454 2,886,981 2,888,829 RGD:9068941
G Snai1 snail family transcriptional repressor 1 JBrowse link NW_004955445 8,232,084 8,237,893 RGD:9068941
G Snai2 snail family transcriptional repressor 2 JBrowse link NW_004955454 8,759,860 8,763,603 RGD:9068941
G Sox13 SRY-box transcription factor 13 JBrowse link NW_004955406 39,959,458 39,994,214 RGD:9068941
G Sp1 Sp1 transcription factor JBrowse link NW_004955458 644,435 677,360 RGD:9068941
G Sp3 Sp3 transcription factor JBrowse link NW_004955449 1,347,781 1,404,368 RGD:9068941
G Sp5 Sp5 transcription factor JBrowse link NW_004955449 4,076,872 4,079,887 RGD:9068941
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link NW_004955577 171,425 183,669 RGD:9068941
G Stat6 signal transducer and activator of transcription 6 JBrowse link NW_004955458 4,833,417 4,847,956 RGD:9068941
G Stox1 storkhead box 1 JBrowse link NW_004955437 22,122,296 22,165,848 RGD:9068941
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor JBrowse link NW_004955464 11,304,611 11,317,420 RGD:9068941
G Tal2 TAL bHLH transcription factor 2 JBrowse link NW_004955419 20,899,292 20,907,288 RGD:9068941
G Tbr1 T-box brain transcription factor 1 JBrowse link NW_004955449 12,293,534 12,301,440 RGD:9068941
G Tbx1 T-box transcription factor 1 JBrowse link NW_004955442 18,320,674 18,327,062 RGD:9068941
G Tbx10 T-box transcription factor 10 JBrowse link NW_004955422 17,857,038 17,866,507 RGD:9068941
G Tbx15 T-box transcription factor 15 JBrowse link NW_004955435 21,874,154 21,993,510 RGD:9068941
G Tbx18 T-box transcription factor 18 JBrowse link NW_004955411 12,194,560 12,232,374 RGD:9068941
G Tbx19 T-box transcription factor 19 JBrowse link NW_004955462 8,830,280 8,856,721 RGD:9068941
G Tbx2 T-box transcription factor 2 JBrowse link NW_004955451 2,458,612 2,466,264 RGD:9068941
G Tbx20 T-box transcription factor 20 JBrowse link NW_004955460 7,794,313 7,856,906 RGD:9068941
G Tbx21 T-box transcription factor 21 JBrowse link NW_004955451 13,315,237 13,317,888 RGD:9068941
G Tbx22 T-box transcription factor 22 JBrowse link NW_004955529 541,057 573,486 RGD:9068941
G Tbx3 T-box transcription factor 3 JBrowse link NW_004955455 15,988,153 16,000,156 RGD:9068941
G Tbx4 T-box transcription factor 4 JBrowse link NW_004955451 2,491,525 2,532,948 RGD:9068941
G Tbx5 T-box transcription factor 5 JBrowse link NW_004955455 16,133,130 16,217,894 RGD:9068941
G Tbx6 T-box transcription factor 6 JBrowse link NW_004955493 6,888,832 6,894,840 RGD:9068941
G Tbxt T-box transcription factor T JBrowse link NW_004955439 15,675,680 15,683,542 RGD:9068941
G Tcf15 transcription factor 15 JBrowse link NW_004955597 446,489 452,003 RGD:9068941
G Tcf21 transcription factor 21 JBrowse link NW_004955439 2,617,562 2,620,613 RGD:9068941
G Tcf23 transcription factor 23 JBrowse link NW_004955469 9,123,987 9,130,728 RGD:9068941
G Tcf24 transcription factor 24 JBrowse link NW_004955444 12,305,496 12,318,230 RGD:9068941
G Tef TEF transcription factor, PAR bZIP family member JBrowse link NW_004955413 26,956,285 26,978,734 RGD:9068941
G Tesmin testis expressed metallothionein like protein JBrowse link NW_004955422 17,161,396 17,199,649 RGD:9068941
G Tfap2a transcription factor AP-2 alpha JBrowse link NW_004955465 3,877,896 3,900,259 RGD:9068941
G Tfap2b transcription factor AP-2 beta JBrowse link NW_004955411 7,143,095 7,171,285 RGD:9068941
G Tfap2c transcription factor AP-2 gamma JBrowse link NW_004955445 2,626,896 2,636,607 RGD:9068941
G Tfap2d transcription factor AP-2 delta JBrowse link NW_004955411 7,219,474 7,276,350 RGD:9068941
G Tfap2e transcription factor AP-2 epsilon JBrowse link NW_004955452 13,666,712 13,682,063 RGD:9068941
G Tfcp2l1 transcription factor CP2 like 1 JBrowse link NW_004955459 8,657,188 8,716,878 RGD:9068941
G Tfdp1 transcription factor Dp-1 JBrowse link NW_004955404 371,905 408,441 RGD:9068941
G Tfdp2 transcription factor Dp-2 JBrowse link NW_004955508 3,722,412 3,844,340 RGD:9068941
G Thra thyroid hormone receptor alpha JBrowse link NW_004955451 14,731,746 14,743,545 RGD:9068941
G Thrb thyroid hormone receptor beta JBrowse link NW_004955430 15,992,146 16,322,696 RGD:9068941
G Tp63 tumor protein p63 JBrowse link NW_004955420 18,178,639 18,384,786 RGD:9068941
G Trps1 transcriptional repressor GATA binding 1 JBrowse link NW_004955417 21,674,545 21,913,137 RGD:9068941
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004955410 22,003,981 22,005,483 RGD:9068941
G Twist2 twist family bHLH transcription factor 2 JBrowse link NW_004955542 1,959,765 2,000,665 RGD:9068941
G Vdr vitamin D receptor JBrowse link NW_004955500 6,745,725 6,798,052 RGD:9068941
G Vezf1 vascular endothelial zinc finger 1 JBrowse link NW_004955451 5,014,310 5,031,080 RGD:9068941
G Xbp1 X-box binding protein 1 JBrowse link NW_004955455 3,037,885 3,041,827 RGD:9068941
G Ybx3 Y-box binding protein 3 JBrowse link NW_004955413 7,090,085 7,111,542 RGD:9068941
G Zbtb12 zinc finger and BTB domain containing 12 JBrowse link NW_004955437 412,985 415,533 RGD:9068941
G Zbtb20 zinc finger and BTB domain containing 20 JBrowse link NW_004955427 14,409,700 15,231,495 RGD:9068941
G Zbtb26 zinc finger and BTB domain containing 26 JBrowse link NW_004955419 5,031,500 5,044,983 RGD:9068941
G Zbtb32 zinc finger and BTB domain containing 32 JBrowse link NW_004955468 2,834,832 2,844,258 RGD:9068941
G Zbtb34 zinc finger and BTB domain containing 34 JBrowse link NW_004955419 1,608,348 1,645,561 RGD:9068941
G Zbtb37 zinc finger and BTB domain containing 37 JBrowse link NW_004955406 14,000,003 14,028,673 RGD:9068941
G Zbtb4 zinc finger and BTB domain containing 4 JBrowse link NW_004955467 9,452,423 9,470,494 RGD:9068941
G Zbtb45 zinc finger and BTB domain containing 45 JBrowse link NW_004955584 1,126,657 1,131,471 RGD:9068941
G Zbtb5 zinc finger and BTB domain containing 5 JBrowse link NW_004955419 29,000,070 29,032,446 RGD:9068941
G Zbtb6 zinc finger and BTB domain containing 6 JBrowse link NW_004955419 5,031,584 5,052,538 RGD:9068941
G Zhx3 zinc fingers and homeoboxes 3 JBrowse link NW_004955445 15,632,723 15,785,238 RGD:9068941
G Zic1 Zic family member 1 JBrowse link NW_004955474 10,029,226 10,033,104 RGD:9068941
G Zic2 Zic family member 2 JBrowse link NW_004955404 10,731,987 10,735,599 RGD:9068941
G Zic3 Zic family member 3 JBrowse link NW_004955489 7,560,684 7,571,739 RGD:9068941
G Zic4 Zic family member 4 JBrowse link NW_004955474 10,021,777 10,056,870 RGD:9068941
G Zic5 Zic family member 5 JBrowse link NW_004955404 10,745,551 10,752,006 RGD:9068941
G Znf131 zinc finger protein 131 JBrowse link NW_004955446 19,066,902 19,106,458 RGD:9068941
G Znf142 zinc finger protein 142 JBrowse link NW_004955453 14,766,665 14,786,403 RGD:9068941
G Znf205 zinc finger protein 205 JBrowse link NW_004955442 14,242,239 14,249,276 RGD:9068941
G Znf696 zinc finger protein 696 JBrowse link NW_004955454 2,015,577 2,021,102 RGD:9068941
G Znf711 zinc finger protein 711 JBrowse link NW_004955529 4,108,202 4,134,696 RGD:9068941
cAMP response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atf2 activating transcription factor 2 JBrowse link NW_004955449 332,563 411,218 RGD:9068941
G Atf6 activating transcription factor 6 JBrowse link NW_004955462 14,352,956 14,553,299 RGD:9068941
G Atf6b activating transcription factor 6 beta JBrowse link NW_004955437 582,083 592,026 RGD:9068941
G Creb1 cAMP responsive element binding protein 1 JBrowse link NW_004955457 7,424,403 7,490,630 RGD:9068941
G Creb3 cAMP responsive element binding protein 3 JBrowse link NW_004955472 564,227 568,708 RGD:9068941
G Creb3l1 cAMP responsive element binding protein 3 like 1 JBrowse link NW_004955422 1,702,131 1,734,603 RGD:9068941
G Creb3l2 cAMP responsive element binding protein 3 like 2 JBrowse link NW_004955494 5,014,509 5,094,220 RGD:9068941
G Creb3l3 cAMP responsive element binding protein 3 like 3 JBrowse link NW_004955495 4,651,086 4,670,852 RGD:9068941
G Creb3l4 cAMP responsive element binding protein 3 like 4 JBrowse link NW_004955545 563,710 569,224 RGD:9068941
G E4f1 E4F transcription factor 1 JBrowse link NW_004955442 15,031,210 15,041,437 RGD:9068941
G Hmga2 high mobility group AT-hook 2 JBrowse link NW_004955458 12,493,790 12,624,805 RGD:9068941
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link NW_004955464 1,107,598 1,110,326 RGD:9068941
G Nr4a3 nuclear receptor subfamily 4 group A member 3 JBrowse link NW_004955419 25,779,368 25,817,445 RGD:9068941
G Tcf12 transcription factor 12 JBrowse link NW_004955450 16,979,990 17,375,264 RGD:9068941
carbohydrate response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mlxipl MLX interacting protein like JBrowse link NW_004955456 14,096,530 14,116,687 RGD:9068941
E-box binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahr aryl hydrocarbon receptor JBrowse link NW_004955410 20,428,531 20,459,482 RGD:9068941
G Arntl aryl hydrocarbon receptor nuclear translocator like JBrowse link NW_004955414 28,652,663 28,748,360 RGD:9068941
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link NW_004955405 37,941,243 37,943,641 RGD:9068941
G Ascl2 achaete-scute family bHLH transcription factor 2 JBrowse link NW_004955422 14,051,140 14,053,521 RGD:9068941
G Atoh8 atonal bHLH transcription factor 8 JBrowse link NW_004955424 1,775,139 1,803,106 RGD:9068941
G Bhlhe40 basic helix-loop-helix family member e40 JBrowse link NW_004955421 8,463,337 8,468,877 RGD:9068941
G Bhlhe41 basic helix-loop-helix family member e41 JBrowse link NW_004955413 21,100,021 21,103,358 RGD:9068941
G Ciart circadian associated repressor of transcription JBrowse link NW_004955413 490,117 494,332 RGD:9068941
G Clock clock circadian regulator JBrowse link NW_004955447 15,394,496 15,537,969 RGD:9068941
G Cry1 cryptochrome circadian regulator 1 JBrowse link NW_004955405 40,878,227 40,941,664 RGD:9068941
G Gata3 GATA binding protein 3 JBrowse link NW_004955421 24,448,446 24,477,885 RGD:9068941
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link NW_004955403 33,478,034 33,481,613 RGD:9068941
G Hdac1 histone deacetylase 1 JBrowse link NW_004955452 10,636,366 10,668,873 RGD:9068941
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004955420 14,565,921 14,568,447 RGD:9068941
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link NW_004955466 8,000,311 8,022,497 RGD:9068941
G Lmo2 LIM domain only 2 JBrowse link NW_004955422 12,354,865 12,362,026 RGD:9068941
G Max MYC associated factor X JBrowse link NW_004955466 4,816,568 4,842,659 RGD:9068941
G Mitf melanocyte inducing transcription factor JBrowse link NW_004955421 17,948,117 18,157,379 RGD:9068941
G Mybbp1a MYB binding protein 1a JBrowse link NW_004955467 12,390,371 12,405,055 RGD:9068941
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link NW_004955461 2,714,022 2,718,872 RGD:9068941
G Myf5 myogenic factor 5 JBrowse link NW_004955405 19,345,943 19,348,453 RGD:9068941
G Myf6 myogenic factor 6 JBrowse link NW_004955405 19,336,798 19,338,610 RGD:9068941
G Myod1 myogenic differentiation 1 JBrowse link NW_004955414 32,523,959 32,526,575 RGD:9068941
G Myog myogenin JBrowse link NW_004955406 39,099,044 39,102,479 RGD:9068941
G Neurod1 neuronal differentiation 1 JBrowse link NW_004955403 15,595,888 15,600,040 RGD:9068941
G Neurod2 neuronal differentiation 2 JBrowse link NW_004955451 14,368,605 14,370,544 RGD:9068941
G Neurog1 neurogenin 1 JBrowse link NW_004955408 30,693,893 30,695,453 RGD:9068941
G Neurog2 neurogenin 2 JBrowse link NW_004955457 14,268,078 14,287,050 RGD:9068941
G Nono non-POU domain containing octamer binding JBrowse link NW_004955475 10,833,514 10,853,460 RGD:9068941
G Nr1d1 nuclear receptor subfamily 1 group D member 1 JBrowse link NW_004955451 14,743,763 14,750,903 RGD:9068941
G Per1 period circadian regulator 1 JBrowse link NW_004955467 8,798,436 8,813,369 RGD:9068941
G Pparg peroxisome proliferator activated receptor gamma JBrowse link NW_004955429 14,814,690 14,936,869 RGD:9068941
G Prmt5 protein arginine methyltransferase 5 JBrowse link NW_004955409 37,369,507 37,378,034 RGD:9068941
G Pspc1 paraspeckle component 1 JBrowse link NW_004955497 574,678 641,885 RGD:9068941
G Ptf1a pancreas associated transcription factor 1a JBrowse link NW_004955429 5,807,804 5,809,522 RGD:9068941
G Scrt2 scratch family transcriptional repressor 2 JBrowse link NW_004955597 504,160 515,609 RGD:9068941
G Scx scleraxis bHLH transcription factor JBrowse link NW_004955454 2,886,981 2,888,829 RGD:9068941
G Sfpq splicing factor proline and glutamine rich JBrowse link NW_004955452 13,267,968 13,283,823 RGD:9068941
G Snai1 snail family transcriptional repressor 1 JBrowse link NW_004955445 8,232,084 8,237,893 RGD:9068941
G Snai2 snail family transcriptional repressor 2 JBrowse link NW_004955454 8,759,860 8,763,603 RGD:9068941
G Srebf2 sterol regulatory element binding transcription factor 2 JBrowse link NW_004955413 27,271,717 27,326,655 RGD:9068941
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor JBrowse link NW_004955464 11,304,611 11,317,420 RGD:9068941
G Tcf12 transcription factor 12 JBrowse link NW_004955450 16,979,990 17,375,264 RGD:9068941
G Tcf21 transcription factor 21 JBrowse link NW_004955439 2,617,562 2,620,613 RGD:9068941
G Tcf3 transcription factor 3 JBrowse link NW_004955495 6,337,311 6,365,193 RGD:9068941
G Tcf4 transcription factor 4 JBrowse link NW_004955402 39,735,596 40,066,151 RGD:9068941
G Tfap4 transcription factor AP-4 JBrowse link NW_004955442 13,160,467 13,174,288 RGD:9068941
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004955410 22,003,981 22,005,483 RGD:9068941
G Zeb1 zinc finger E-box binding homeobox 1 JBrowse link NW_004955429 23,011,627 23,198,188 RGD:9068941
estrogen response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Esr1 estrogen receptor 1 JBrowse link NW_004955439 9,588,631 9,953,606 RGD:9068941
G Esr2 estrogen receptor 2 JBrowse link NW_004955466 5,587,003 5,644,765 RGD:9068941
G Tox3 TOX high mobility group box family member 3 JBrowse link NW_004955433 10,328,886 10,426,540 RGD:9068941
G Trim24 tripartite motif containing 24 JBrowse link NW_004955494 4,308,924 4,421,588 RGD:9068941
N-box binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004955420 14,565,921 14,568,447 RGD:9068941
retinoic acid-responsive element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr2f1 nuclear receptor subfamily 2 group F member 1 JBrowse link NW_004955418 18,615,548 18,622,984 RGD:9068941
G Rara retinoic acid receptor alpha JBrowse link NW_004955451 14,876,663 14,917,134 RGD:9068941
G Rxra retinoid X receptor alpha JBrowse link NW_004955513 3,313,544 3,386,544 RGD:9068941
G Rxrb retinoid X receptor beta JBrowse link NW_004955437 1,767,833 1,774,401 RGD:9068941
G Rxrg retinoid X receptor gamma JBrowse link NW_004955462 11,238,963 11,281,905 RGD:9068941
G Znf536 zinc finger protein 536 JBrowse link NW_004955468 7,049,301 7,488,706 RGD:9068941
RNA polymerase II cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actb actin beta JBrowse link NW_004955460 10,358,100 10,361,585 RGD:9068941
G Actl6a actin like 6A JBrowse link NW_004955420 8,745,390 8,764,993 RGD:9068941
G Aebp2 AE binding protein 2 JBrowse link NW_004955413 15,514,247 15,561,233 RGD:9068941
G Ago1 argonaute RISC component 1 JBrowse link NW_004955452 13,935,028 13,967,281 RGD:9068941
G Akna AT-hook transcription factor JBrowse link NW_004955419 13,218,060 13,261,289 RGD:9068941
G Aknad1 AKNA domain containing 1 JBrowse link NW_004955435 12,275,079 12,314,424 RGD:9068941
G App amyloid beta precursor protein JBrowse link NW_004955407 25,725,259 25,973,582 RGD:9068941
G Ar androgen receptor JBrowse link NW_004955475 7,013,960 7,192,473 RGD:9068941
G Arid3b AT-rich interaction domain 3B JBrowse link NW_004955450 3,272,820 3,318,820 RGD:9068941
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link NW_004955588 159,462 233,047 RGD:9068941
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 JBrowse link NW_004955416 11,279,866 11,429,365 RGD:9068941
G Arntl aryl hydrocarbon receptor nuclear translocator like JBrowse link NW_004955414 28,652,663 28,748,360 RGD:9068941
G Arx aristaless related homeobox JBrowse link NW_004955509 5,326,145 5,338,250 RGD:9068941
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link NW_004955405 37,941,243 37,943,641 RGD:9068941
G Ascl2 achaete-scute family bHLH transcription factor 2 JBrowse link NW_004955422 14,051,140 14,053,521 RGD:9068941
G Atf2 activating transcription factor 2 JBrowse link NW_004955449 332,563 411,218 RGD:9068941
G Atf3 activating transcription factor 3 JBrowse link NW_004955406 4,875,672 4,889,173 RGD:9068941
G Atf4 activating transcription factor 4 JBrowse link NW_004955413 25,406,589 25,408,727 RGD:9068941
G Atf6 activating transcription factor 6 JBrowse link NW_004955462 14,352,956 14,553,299 RGD:9068941
G Atf6b activating transcription factor 6 beta JBrowse link NW_004955437 582,083 592,026 RGD:9068941
G Atf7 activating transcription factor 7 JBrowse link NW_004955458 803,738 898,847 RGD:9068941
G Atoh1 atonal bHLH transcription factor 1 JBrowse link NW_004955405 4,461,704 4,462,756 RGD:9068941
G Bach1 BTB domain and CNC homolog 1 JBrowse link NW_004955407 28,678,181 28,701,115 RGD:9068941
G Bach2 BTB domain and CNC homolog 2 JBrowse link NW_004955411 16,607,546 16,947,359 RGD:9068941
G Batf basic leucine zipper ATF-like transcription factor JBrowse link NW_004955523 42,365 66,103 RGD:9068941
G Batf2 basic leucine zipper ATF-like transcription factor 2 JBrowse link NW_004955422 20,188,965 20,195,886 RGD:9068941
G Batf3 basic leucine zipper ATF-like transcription factor 3 JBrowse link NW_004955815 2,852 11,035 RGD:9068941
G Bcl11a BAF chromatin remodeling complex subunit BCL11A JBrowse link NW_004955424 23,233,523 23,330,679 RGD:9068941
G Bcl11b BAF chromatin remodeling complex subunit BCL11B JBrowse link NW_004955438 20,562,345 20,637,662 RGD:9068941
G Bcl3 BCL3 transcription coactivator JBrowse link NW_004955555 1,898,280 1,911,466 RGD:9068941
G Bcl6 BCL6 transcription repressor JBrowse link NW_004955420 19,998,960 20,021,200 RGD:9068941
G Bhlhe41 basic helix-loop-helix family member e41 JBrowse link NW_004955413 21,100,021 21,103,358 RGD:9068941
G Bptf bromodomain PHD finger transcription factor JBrowse link NW_004955478 6,990,816 7,088,751 RGD:9068941
G Bsx brain specific homeobox JBrowse link NW_004955412 23,796,973 23,801,479 RGD:9068941
G Calcoco1 calcium binding and coiled-coil domain 1 JBrowse link NW_004955458 994,511 1,009,430 RGD:9068941
G Carf calcium responsive transcription factor JBrowse link NW_004955457 11,853,256 11,947,909 RGD:9068941
G Cc2d1a coiled-coil and C2 domain containing 1A JBrowse link NW_004955415 32,667,832 32,682,945 RGD:9068941
G Cc2d1b coiled-coil and C2 domain containing 1B JBrowse link NW_004955464 6,792,456 6,805,284 RGD:9068941
G Ccar1 cell division cycle and apoptosis regulator 1 JBrowse link NW_004955425 20,878,178 20,923,007 RGD:9068941
G Cdk9 cyclin dependent kinase 9 JBrowse link NW_004955419 874,959 883,160 RGD:9068941
G Cdx1 caudal type homeobox 1 JBrowse link NW_004955415 4,337,903 4,355,782 RGD:9068941
G Cdx2 caudal type homeobox 2 JBrowse link NW_004955497 7,316,372 7,321,627 RGD:9068941
G Cebpa CCAAT enhancer binding protein alpha JBrowse link NW_004955468 3,046,544 3,049,217 RGD:9068941
G Cebpb CCAAT enhancer binding protein beta JBrowse link NW_004955445 8,060,432 8,061,289 RGD:9068941
G Cebpd CCAAT enhancer binding protein delta JBrowse link NW_004955454 7,711,010 7,711,680 RGD:9068941
G Cebpe CCAAT enhancer binding protein epsilon JBrowse link NW_004955409 37,186,282 37,187,914 RGD:9068941
G Cebpz CCAAT enhancer binding protein zeta JBrowse link NW_004955441 5,013,144 5,033,830 RGD:9068941
G Chd2 chromodomain helicase DNA binding protein 2 JBrowse link NW_004955416 21,085,570 21,210,321 RGD:9068941
G Chd4 chromodomain helicase DNA binding protein 4 JBrowse link NW_004955413 4,191,619 4,228,225 RGD:9068941
G Chd7 chromodomain helicase DNA binding protein 7 JBrowse link NW_004955444 17,859,999 18,067,623 RGD:9068941
G Ciart circadian associated repressor of transcription JBrowse link NW_004955413 490,117 494,332 RGD:9068941
G Clock clock circadian regulator JBrowse link NW_004955447 15,394,496 15,537,969 RGD:9068941
G Creb1 cAMP responsive element binding protein 1 JBrowse link NW_004955457 7,424,403 7,490,630 RGD:9068941
G Creb3 cAMP responsive element binding protein 3 JBrowse link NW_004955472 564,227 568,708 RGD:9068941
G Crx cone-rod homeobox JBrowse link NW_004955574 1,544,917 1,548,912 RGD:9068941
G Ctcf CCCTC-binding factor JBrowse link NW_004955484 9,041,226 9,092,924 RGD:9068941
G Ctcfl CCCTC-binding factor like JBrowse link NW_004955445 1,944,845 1,969,502 RGD:9068941
G Cux2 cut like homeobox 2 JBrowse link NW_004955482 7,783,483 8,045,808 RGD:9068941
G Dach1 dachshund family transcription factor 1 JBrowse link NW_004955404 34,739,780 35,118,037 RGD:9068941
G Ddit3 DNA damage inducible transcript 3 JBrowse link NW_004955458 5,232,979 5,238,513 RGD:9068941
G Ddn dendrin JBrowse link NW_004955500 7,828,759 7,833,397 RGD:9068941
G Dhx36 DEAH-box helicase 36 JBrowse link NW_004955448 5,634,072 5,676,272 RGD:9068941
G Dhx9 DExH-box helicase 9 JBrowse link NW_004955406 21,697,813 21,743,551 RGD:9068941
G Dlx1 distal-less homeobox 1 JBrowse link NW_004955449 2,920,705 2,924,667 RGD:9068941
G Dlx2 distal-less homeobox 2 JBrowse link NW_004955449 2,907,502 2,909,893 RGD:9068941
G Dlx3 distal-less homeobox 3 JBrowse link NW_004955451 11,635,027 11,640,091 RGD:9068941
G Dlx4 distal-less homeobox 4 JBrowse link NW_004955451 11,652,249 11,660,083 RGD:9068941
G Dlx5 distal-less homeobox 5 JBrowse link NW_004955432 13,429,832 13,434,160 RGD:9068941
G Dlx6 distal-less homeobox 6 JBrowse link NW_004955432 13,415,039 13,420,506 RGD:9068941
G Dmtf1 cyclin D binding myb like transcription factor 1 JBrowse link NW_004955621 50,457 95,460 RGD:9068941
G Dnmt3a DNA methyltransferase 3 alpha JBrowse link NW_004955469 7,264,431 7,367,059 RGD:9068941
G Dpf2 double PHD fingers 2 JBrowse link NW_004955422 19,894,502 19,910,989 RGD:9068941
G Drap1 DR1 associated protein 1 JBrowse link NW_004955422 19,406,106 19,408,232 RGD:9068941
G E2f4 E2F transcription factor 4 JBrowse link NW_004955484 9,421,396 9,427,826 RGD:9068941
G E2f7 E2F transcription factor 7 JBrowse link NW_004955405 16,148,640 16,187,272 RGD:9068941
G E2f8 E2F transcription factor 8 JBrowse link NW_004955476 197,699 215,227 RGD:9068941
G Ebf2 EBF transcription factor 2 JBrowse link NW_004955403 48,674,218 48,859,843 RGD:9068941
G Ebf3 EBF transcription factor 3 JBrowse link NW_004955477 7,435,324 7,557,212 RGD:9068941
G Eed embryonic ectoderm development JBrowse link NW_004955414 6,659,144 6,685,530 RGD:9068941
G Egr2 early growth response 2 JBrowse link NW_004955425 16,055,748 16,068,429 RGD:9068941
G Ehf ETS homologous factor JBrowse link NW_004955422 11,599,245 11,640,828 RGD:9068941
G Elf1 E74 like ETS transcription factor 1 JBrowse link NW_004955404 50,952,907 51,020,229 RGD:9068941
G Elf3 E74 like ETS transcription factor 3 JBrowse link NW_004955406 38,126,633 38,131,292 RGD:9068941
G Elf4 E74 like ETS transcription factor 4 JBrowse link NW_004955473 4,934,770 4,986,283 RGD:9068941
G Elk1 ETS transcription factor ELK1 JBrowse link NW_004955516 431,081 444,871 RGD:9068941
G Elk3 ETS transcription factor ELK3 JBrowse link NW_004955405 32,526,911 32,559,580 RGD:9068941
G Elk4 ETS transcription factor ELK4 JBrowse link NW_004955406 41,325,921 41,333,503 RGD:9068941
G Emx1 empty spiracles homeobox 1 JBrowse link NW_004955424 12,666,280 12,683,023 RGD:9068941
G Emx2 empty spiracles homeobox 2 JBrowse link NW_004955431 22,192,446 22,199,141 RGD:9068941
G En1 engrailed homeobox 1 JBrowse link NW_004955459 10,839,581 10,844,198 RGD:9068941
G Ep300 E1A binding protein p300 JBrowse link NW_004955413 26,647,553 26,727,875 RGD:9068941
G Epas1 endothelial PAS domain protein 1 JBrowse link NW_004955441 13,244,626 13,328,220 RGD:9068941
G Erg ETS transcription factor ERG JBrowse link NW_004955407 37,372,471 37,613,674 RGD:9068941
G Esr1 estrogen receptor 1 JBrowse link NW_004955439 9,588,631 9,953,606 RGD:9068941
G Esr2 estrogen receptor 2 JBrowse link NW_004955466 5,587,003 5,644,765 RGD:9068941
G Esrra estrogen related receptor alpha JBrowse link NW_004955422 20,768,450 20,775,205 RGD:9068941
G Esrrb estrogen related receptor beta JBrowse link NW_004955438 365,375 534,086 RGD:9068941
G Ets1 ETS proto-oncogene 1, transcription factor JBrowse link NW_004955412 29,433,730 29,602,389 RGD:9068941
G Ets2 ETS proto-oncogene 2, transcription factor JBrowse link NW_004955407 37,747,152 37,764,170 RGD:9068941
G Etv1 ETS variant transcription factor 1 JBrowse link NW_004955410 17,445,496 17,535,856 RGD:9068941
G Etv2 ETS variant transcription factor 2 JBrowse link NW_004955468 4,857,023 4,859,926 RGD:9068941
G Etv4 ETS variant transcription factor 4 JBrowse link NW_004955451 16,965,404 16,976,503 RGD:9068941
G Etv6 ETS variant transcription factor 6 JBrowse link NW_004955413 8,698,412 8,912,011 RGD:9068941
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link NW_004955491 4,215,353 4,292,229 RGD:9068941
G Fezf1 FEZ family zinc finger 1 JBrowse link NW_004955479 3,945,358 3,953,924 RGD:9068941
G Fezf2 FEZ family zinc finger 2 JBrowse link NW_004955517 3,439,999 3,443,477 RGD:9068941
G Figla folliculogenesis specific bHLH transcription factor JBrowse link NW_004955424 14,393,566 14,402,971 RGD:9068941
G Fli1 Fli-1 proto-oncogene, ETS transcription factor JBrowse link NW_004955412 29,653,621 29,773,412 RGD:9068941
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link NW_004955523 307,181 310,728 RGD:9068941
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit JBrowse link NW_004955555 2,438,864 2,445,846 RGD:9068941
G Fosl1 FOS like 1, AP-1 transcription factor subunit JBrowse link NW_004955422 19,425,741 19,431,801 RGD:9068941
G Fosl2 FOS like 2, AP-1 transcription factor subunit JBrowse link NW_004955469 10,297,179 10,319,180 RGD:9068941
G Foxa1 forkhead box A1 JBrowse link NW_004955409 23,598,127 23,599,827 RGD:9068941
G Foxa2 forkhead box A2 JBrowse link NW_004955415 29,982,940 29,987,093 RGD:9068941
G Foxd1 forkhead box D1 JBrowse link NW_004955425 27,158,601 27,159,447 RGD:9068941
G Foxf1 forkhead box F1 JBrowse link NW_004955541 1,341,715 1,345,397 RGD:9068941
G Foxi1 forkhead box I1 JBrowse link NW_004955408 23,074,876 23,078,766 RGD:9068941
G Foxj1 forkhead box J1 JBrowse link NW_004955506 6,127,551 6,132,302 RGD:9068941
G Foxj2 forkhead box J2 JBrowse link NW_004955413 6,692,343 6,705,760 RGD:9068941
G Foxj3 forkhead box J3 JBrowse link NW_004955537 1,816,431 1,936,380 RGD:9068941
G Foxk2 forkhead box K2 JBrowse link NW_004955506 567,770 614,505 RGD:9068941
G Foxl2 forkhead box L2 JBrowse link NW_004955501 83,965 84,476 RGD:9068941
G Foxo3 forkhead box O3 JBrowse link NW_004955411 33,655,958 33,770,829 RGD:9068941
G Foxp2 forkhead box P2 JBrowse link NW_004955432 20,205,369 20,589,608 RGD:9068941
G Foxp3 forkhead box P3 JBrowse link NW_004955543 731,707 742,606 RGD:9068941
G Foxq1 forkhead box Q1 JBrowse link NW_004955465 11,802,947 11,803,381 RGD:9068941
G Foxs1 forkhead box S1 JBrowse link NW_004955422 29,132,325 29,133,641 RGD:9068941
G Fubp3 far upstream element binding protein 3 JBrowse link NW_004955513 548,202 595,427 RGD:9068941
G Gabpa GA binding protein transcription factor subunit alpha JBrowse link NW_004955407 25,609,840 25,641,886 RGD:9068941
G Gata1 GATA binding protein 1 JBrowse link NW_004955543 334,581 342,042 RGD:9068941
G Gata2 GATA binding protein 2 JBrowse link NW_004955429 15,326,551 15,334,774 RGD:9068941
G Gata3 GATA binding protein 3 JBrowse link NW_004955421 24,448,446 24,477,885 RGD:9068941
G Gata4 GATA binding protein 4 JBrowse link NW_004955403 52,958,318 53,029,267 RGD:9068941
G Gata5 GATA binding protein 5 JBrowse link NW_004955528 1,595,231 1,604,979 RGD:9068941
G Gatad2b GATA zinc finger domain containing 2B JBrowse link NW_004955545 424,997 519,031 RGD:9068941
G Gcfc2 GC-rich sequence DNA-binding factor 2 JBrowse link NW_004955424 10,174,291 10,202,201 RGD:9068941
G Gcm1 glial cells missing transcription factor 1 JBrowse link NW_004955411 2,872,758 2,917,154 RGD:9068941
G Gli1 GLI family zinc finger 1 JBrowse link NW_004955458 5,181,761 5,193,500 RGD:9068941
G Gli2 GLI family zinc finger 2 JBrowse link NW_004955459 8,892,917 9,124,672 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004955460 1,528,457 1,805,584 RGD:9068941
G Gmeb1 glucocorticoid modulatory element binding protein 1 JBrowse link NW_004955452 7,732,095 7,766,810 RGD:9068941
G Gmeb2 glucocorticoid modulatory element binding protein 2 JBrowse link NW_004955528 603,817 638,698 RGD:9068941
G Grhl1 grainyhead like transcription factor 1 JBrowse link NW_004955487 5,407,187 5,432,828 RGD:9068941
G Grhl3 grainyhead like transcription factor 3 JBrowse link NW_004955452 4,125,792 4,159,699 RGD:9068941
G Gsc goosecoid homeobox JBrowse link NW_004955438 17,653,149 17,655,091 RGD:9068941
G Gsx1 GS homeobox 1 JBrowse link NW_004955497 7,167,915 7,169,177 RGD:9068941
G Gzf1 GDNF inducible zinc finger protein 1 JBrowse link NW_004955415 30,381,153 30,391,239 RGD:9068941
G H3f3a H3 histone, family 3A JBrowse link NW_004955489 269,900 278,398 RGD:9068941
G H3f3b H3 histone, family 3B JBrowse link NW_004955506 6,475,336 6,478,781 RGD:9068941
G Hand1 heart and neural crest derivatives expressed 1 JBrowse link NW_004955408 8,848,723 8,851,804 RGD:9068941
G Hbp1 HMG-box transcription factor 1 JBrowse link NW_004955410 11,626,743 11,652,343 RGD:9068941
G Hcfc1 host cell factor C1 JBrowse link NW_004955580 616,477 636,849 RGD:9068941
G Hdac1 histone deacetylase 1 JBrowse link NW_004955452 10,636,366 10,668,873 RGD:9068941
G Hdac2 histone deacetylase 2 JBrowse link NW_004955526 2,739,099 2,759,640 RGD:9068941
G Hdac4 histone deacetylase 4 JBrowse link NW_004955542 1,629,691 1,886,160 RGD:9068941
G Hdac5 histone deacetylase 5 JBrowse link NW_004955451 17,223,217 17,246,451 RGD:9068941
G Hdac6 histone deacetylase 6 JBrowse link NW_004955543 348,314 378,391 RGD:9068941
G Helt helt bHLH transcription factor JBrowse link NW_004955403 23,996,488 23,998,290 RGD:9068941
G Hes2 hes family bHLH transcription factor 2 JBrowse link NW_004955486 6,158,863 6,161,289 RGD:9068941
G Hes3 hes family bHLH transcription factor 3 JBrowse link NW_004955486 6,272,757 6,273,721 RGD:9068941
G Hesx1 HESX homeobox 1 JBrowse link NW_004955430 6,955,575 6,956,991 RGD:9068941
G Heyl hes related family bHLH transcription factor with YRPW motif like JBrowse link NW_004955452 17,137,066 17,152,714 RGD:9068941
G Hhex hematopoietically expressed homeobox JBrowse link NW_004955425 737,506 742,775 RGD:9068941
G Hinfp histone H4 transcription factor JBrowse link NW_004955412 20,236,607 20,247,288 RGD:9068941
G Hivep1 HIVEP zinc finger 1 JBrowse link NW_004955465 2,410,629 2,547,889 RGD:9068941
G Hltf helicase like transcription factor JBrowse link NW_004955474 8,411,912 8,488,938 RGD:9068941
G Hmga2 high mobility group AT-hook 2 JBrowse link NW_004955458 12,493,790 12,624,805 RGD:9068941
G Hnf1a HNF1 homeobox A JBrowse link NW_004955455 10,694,102 10,717,613 RGD:9068941
G Hnf4a hepatocyte nuclear factor 4 alpha JBrowse link NW_004955445 12,925,248 12,962,501 RGD:9068941
G Hnf4g hepatocyte nuclear factor 4 gamma JBrowse link NW_004955444 5,081,013 5,157,988 RGD:9068941
G Hnrnpc heterogeneous nuclear ribonucleoprotein C JBrowse link NW_004955550 1,949,975 2,002,297 RGD:9068941
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link NW_004955432 3,246,090 3,257,774 RGD:9068941
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link NW_004955406 8,000,269 8,021,554 RGD:9068941
G Hoxa10 homeobox A10 JBrowse link NW_004955410 28,864,785 28,874,454 RGD:9068941
G Hoxa2 homeobox A2 JBrowse link NW_004955410 28,794,878 28,798,231 RGD:9068941
G Hoxa3 homeobox A3 JBrowse link NW_004955410 28,801,918 28,846,605 RGD:9068941
G Hoxa5 homeobox A5 JBrowse link NW_004955410 28,835,795 28,838,244 RGD:9068941
G Hoxa6 homeobox A6 JBrowse link NW_004955410 28,839,924 28,844,328 RGD:9068941
G Hoxa7 homeobox A7 JBrowse link NW_004955410 28,848,029 28,851,069 RGD:9068941
G Hoxa9 homeobox A9 JBrowse link NW_004955410 28,856,661 28,861,803 RGD:9068941
G Hoxb1 homeobox B1 JBrowse link NW_004955451 12,707,560 12,708,950 RGD:9068941
G Hoxb2 homeobox B2 JBrowse link NW_004955451 12,693,764 12,697,825 RGD:9068941
G Hoxb3 homeobox B3 JBrowse link NW_004955451 12,651,229 12,690,941 RGD:9068941
G Hoxb5 homeobox B5 JBrowse link NW_004955451 12,637,229 12,650,261 RGD:9068941
G Hoxb6 homeobox B6 JBrowse link NW_004955451 12,637,221 12,645,749 RGD:9068941
G Hoxb7 homeobox B7 JBrowse link NW_004955451 12,630,276 12,634,641 RGD:9068941
G Hoxb9 homeobox B9 JBrowse link NW_004955451 12,616,465 12,616,926 RGD:9068941
G Hoxc11 homeobox C11 JBrowse link NW_004955458 1,231,625 1,234,785 RGD:9068941
G Hoxc4 homeobox C4 JBrowse link NW_004955458 1,251,601 1,313,291 RGD:9068941
G Hoxc5 homeobox C5 JBrowse link NW_004955458 1,288,411 1,293,095 RGD:9068941
G Hoxc6 homeobox C6 JBrowse link NW_004955458 1,284,351 1,288,391 RGD:9068941
G Hoxc9 homeobox C9 JBrowse link NW_004955458 1,258,364 1,261,510 RGD:9068941
G Hoxd13 homeobox D13 JBrowse link NW_004955403 20,568,314 20,575,579 RGD:9068941
G Hoxd3 homeobox D3 JBrowse link NW_004955403 20,489,663 20,496,021 RGD:9068941
G Hoxd9 homeobox D9 JBrowse link NW_004955451 12,619,722 12,621,320 RGD:9068941
G Hsf1 heat shock transcription factor 1 JBrowse link NW_004955454 2,907,265 2,932,352 RGD:9068941
G Hsf2 heat shock transcription factor 2 JBrowse link NW_004955436 4,387,498 4,406,719 RGD:9068941
G Hsf4 heat shock transcription factor 4 JBrowse link NW_004955484 9,447,641 9,452,784 RGD:9068941
G Hsf5 heat shock transcription factor 5 JBrowse link NW_004955451 4,564,576 4,601,868 RGD:9068941
G Ifi16 interferon gamma inducible protein 16 JBrowse link NW_004955468 10,828,726 10,845,853 RGD:9068941
G Insm1 INSM transcriptional repressor 1 JBrowse link NW_004955415 28,396,176 28,398,114 RGD:9068941
G Irf1 interferon regulatory factor 1 JBrowse link NW_004955408 3,882,282 3,887,965 RGD:9068941
G Irf3 interferon regulatory factor 3 JBrowse link NW_004955559 1,223,986 1,228,671 RGD:9068941
G Irf4 interferon regulatory factor 4 JBrowse link NW_004955465 12,497,534 12,512,529 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004955476 11,442,781 11,445,706 RGD:9068941
G Irf8 interferon regulatory factor 8 JBrowse link NW_004955541 973,004 988,493 RGD:9068941
G Irf9 interferon regulatory factor 9 JBrowse link NW_004955409 36,233,633 36,239,916 RGD:9068941
G Isl1 ISL LIM homeobox 1 JBrowse link NW_004955446 15,824,956 15,835,000 RGD:9068941
G Jdp2 Jun dimerization protein 2 JBrowse link NW_004955523 140,546 169,769 RGD:9068941
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link NW_004955464 1,107,598 1,110,326 RGD:9068941
G Junb JunB proto-oncogene, AP-1 transcription factor subunit JBrowse link NW_004955415 31,876,508 31,878,289 RGD:9068941
G Jund JunD proto-oncogene, AP-1 transcription factor subunit JBrowse link NW_004955524 3,176,849 3,177,936 RGD:9068941
G Kcnip3 potassium voltage-gated channel interacting protein 3 JBrowse link NW_004955470 3,545,434 3,613,288 RGD:9068941
G Kdm2b lysine demethylase 2B JBrowse link NW_004955482 6,774,021 6,885,113 RGD:9068941
G Kdm6a lysine demethylase 6A JBrowse link NW_004955516 3,151,350 3,346,832 RGD:9068941
G Kdm6b lysine demethylase 6B JBrowse link NW_004955467 9,085,239 9,106,658 RGD:9068941
G Klf10 Kruppel like factor 10 JBrowse link NW_004955417 27,165,146 27,168,604 RGD:9068941
G Klf13 Kruppel like factor 13 JBrowse link NW_004955416 30,087,705 30,137,437 RGD:9068941
G Klf15 Kruppel like factor 15 JBrowse link NW_004955421 21,609,709 21,618,920 RGD:9068941
G Klf16 Kruppel like factor 16 JBrowse link NW_004955495 6,178,565 6,189,469 RGD:9068941
G Klf4 Kruppel like factor 4 JBrowse link NW_004955419 19,280,311 19,284,097 RGD:9068941
G Klf5 Kruppel like factor 5 JBrowse link NW_004955404 33,642,604 33,665,445 RGD:9068941
G Klf6 Kruppel like factor 6 JBrowse link NW_004955429 1,838,537 1,846,915 RGD:9068941
G Klf7 Kruppel like factor 7 JBrowse link NW_004955457 7,833,711 7,918,754 RGD:9068941
G Klf8 Kruppel like factor 8 JBrowse link NW_004955475 2,938,071 2,998,435 RGD:9068941
G Lef1 lymphoid enhancer binding factor 1 JBrowse link NW_004955496 1,728,840 1,827,749 RGD:9068941
G Lhx2 LIM homeobox 2 JBrowse link NW_004955419 3,999,364 4,019,543 RGD:9068941
G Lhx3 LIM homeobox 3 JBrowse link NW_004955513 4,464,149 4,470,962 RGD:9068941
G Litaf lipopolysaccharide induced TNF factor JBrowse link NW_004955442 7,054,418 7,084,973 RGD:9068941
G LOC102021365 histone H2A.Z JBrowse link NW_004955496 7,733,910 7,735,525 RGD:9068941
G Lrrfip1 LRR binding FLII interacting protein 1 JBrowse link NW_004955542 2,632,933 2,737,922 RGD:9068941
G Maf MAF bZIP transcription factor JBrowse link NW_004955522 2,514,313 2,519,694 RGD:9068941
G Mafa MAF bZIP transcription factor A JBrowse link NW_004955454 2,134,340 2,136,962 RGD:9068941
G Mafb MAF bZIP transcription factor B JBrowse link NW_004955445 16,219,675 16,222,913 RGD:9068941
G Maff MAF bZIP transcription factor F JBrowse link NW_004955413 24,494,326 24,504,728 RGD:9068941
G Mafg MAF bZIP transcription factor G JBrowse link NW_004955506 1,247,294 1,252,167 RGD:9068941
G Mafk MAF bZIP transcription factor K JBrowse link NW_004955460 9,155,713 9,167,291 RGD:9068941
G Maz MYC associated zinc finger protein JBrowse link NW_004955493 7,149,600 7,152,449 RGD:9068941
G Mbd2 methyl-CpG binding domain protein 2 JBrowse link NW_004955402 38,761,668 38,829,830 RGD:9068941
G Mbd3 methyl-CpG binding domain protein 3 JBrowse link NW_004955495 6,385,449 6,388,911 RGD:9068941
G Med1 mediator complex subunit 1 JBrowse link NW_004955451 14,204,326 14,237,809 RGD:9068941
G Med12 mediator complex subunit 12 JBrowse link NW_004955475 10,687,168 10,710,286 RGD:9068941
G Med8 mediator complex subunit 8 JBrowse link NW_004955537 2,963,779 2,968,827 RGD:9068941
G Mef2a myocyte enhancer factor 2A JBrowse link NW_004955416 26,926,753 27,051,171 RGD:9068941
G Mef2b myocyte enhancer factor 2B JBrowse link NW_004955524 2,649,413 2,664,173 RGD:9068941
G Mef2c myocyte enhancer factor 2C JBrowse link NW_004955418 22,537,388 22,701,434 RGD:9068941
G Mef2d myocyte enhancer factor 2D JBrowse link NW_004955545 2,569,399 2,602,580 RGD:9068941
G Meis1 Meis homeobox 1 JBrowse link NW_004955424 18,060,499 18,190,425 RGD:9068941
G Meis2 Meis homeobox 2 JBrowse link NW_004955416 4,104,114 4,311,791 RGD:9068941
G Meox1 mesenchyme homeobox 1 JBrowse link NW_004955451 17,013,180 17,022,131 RGD:9068941
G Meox2 mesenchyme homeobox 2 JBrowse link NW_004955410 18,924,669 18,988,478 RGD:9068941
G Mesp2 mesoderm posterior bHLH transcription factor 2 JBrowse link NW_004955416 15,447,959 15,450,209 RGD:9068941
G Mitf melanocyte inducing transcription factor JBrowse link NW_004955421 17,948,117 18,157,379 RGD:9068941
G Mixl1 Mix paired-like homeobox JBrowse link NW_004955489 418,650 422,428 RGD:9068941
G Msc musculin JBrowse link NW_004955444 8,064,867 8,067,381 RGD:9068941
G Msgn1 mesogenin 1 JBrowse link NW_004955469 617,029 617,610 RGD:9068941
G Mta1 metastasis associated 1 JBrowse link NW_004955538 3,630,383 3,671,005 RGD:9068941
G Mtf1 metal regulatory transcription factor 1 JBrowse link NW_004955452 15,580,460 15,627,844 RGD:9068941
G Muc1 mucin 1, cell surface associated JBrowse link NW_004955545 1,657,728 1,662,112 RGD:9068941
G Mxd1 MAX dimerization protein 1 JBrowse link NW_004955424 15,209,609 15,235,396 RGD:9068941
G Myb MYB proto-oncogene, transcription factor JBrowse link NW_004955439 1,523,516 1,560,185 RGD:9068941
G Mybl1 MYB proto-oncogene like 1 JBrowse link NW_004955444 12,589,464 12,620,602 RGD:9068941
G Mybl2 MYB proto-oncogene like 2 JBrowse link NW_004955445 13,496,919 13,530,689 RGD:9068941
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link NW_004955461 2,714,022 2,718,872 RGD:9068941
G Mycl MYCL proto-oncogene, bHLH transcription factor JBrowse link NW_004955452 17,390,285 17,397,115 RGD:9068941
G Mycn MYCN proto-oncogene, bHLH transcription factor JBrowse link NW_004955487 9,219,528 9,224,818 RGD:9068941
G Myef2 myelin expression factor 2 JBrowse link NW_004955409 5,713,495 5,747,528 RGD:9068941
G Myf5 myogenic factor 5 JBrowse link NW_004955405 19,345,943 19,348,453 RGD:9068941
G Myf6 myogenic factor 6 JBrowse link NW_004955405 19,336,798 19,338,610 RGD:9068941
G Myocd myocardin JBrowse link NW_004955467 4,653,065 4,743,438 RGD:9068941
G Myod1 myogenic differentiation 1 JBrowse link NW_004955414 32,523,959 32,526,575 RGD:9068941
G Myog myogenin JBrowse link NW_004955406 39,099,044 39,102,479 RGD:9068941
G Mypop Myb related transcription factor, partner of profilin JBrowse link NW_004955574 316,188 325,288 RGD:9068941
G Myt1 myelin transcription factor 1 JBrowse link NW_004955528 48,198 108,293 RGD:9068941
G Myt1l myelin transcription factor 1 like JBrowse link NW_004955487 4,457,145 4,855,369 RGD:9068941
G Mzf1 myeloid zinc finger 1 JBrowse link NW_004955584 1,167,428 1,174,434 RGD:9068941
G Nacc1 nucleus accumbens associated 1 JBrowse link NW_004955415 32,135,633 32,152,059 RGD:9068941
G Nacc2 NACC family member 2 JBrowse link NW_004955513 4,560,903 4,595,081 RGD:9068941
G Nanog Nanog homeobox JBrowse link NW_004955413 6,561,323 6,565,770 RGD:9068941
G Ncoa2 nuclear receptor coactivator 2 JBrowse link NW_004955444 9,313,748 9,587,109 RGD:9068941
G Ndn necdin, MAGE family member JBrowse link NW_004955416 31,125,354 31,127,010 RGD:9068941
G Neurod6 neuronal differentiation 6 JBrowse link NW_004955410 32,408,052 32,411,273 RGD:9068941
G Neurog3 neurogenin 3 JBrowse link NW_004955437 21,577,896 21,578,546 RGD:9068941
G Nfat5 nuclear factor of activated T cells 5 JBrowse link NW_004955484 7,034,799 7,142,883 RGD:9068941
G Nfatc1 nuclear factor of activated T cells 1 JBrowse link NW_004955402 62,558,392 62,674,347 RGD:9068941
G Nfatc2 nuclear factor of activated T cells 2 JBrowse link NW_004955445 7,035,876 7,153,199 RGD:9068941
G Nfatc3 nuclear factor of activated T cells 3 JBrowse link NW_004955484 8,433,765 8,558,005 RGD:9068941
G Nfatc4 nuclear factor of activated T cells 4 JBrowse link NW_004955409 35,931,208 35,941,555 RGD:9068941
G Nfe2l1 nuclear factor, erythroid 2 like 1 JBrowse link NW_004955451 13,088,680 13,099,839 RGD:9068941
G Nfe2l2 nuclear factor, erythroid 2 like 2 JBrowse link NW_004955403 19,510,122 19,536,428 RGD:9068941
G Nfe2l3 nuclear factor, erythroid 2 like 3 JBrowse link NW_004955410 27,999,098 28,031,941 RGD:9068941
G Nfia nuclear factor I A JBrowse link NW_004955423 27,799,976 28,108,307 RGD:9068941
G Nfib nuclear factor I B JBrowse link NW_004955434 17,192,188 17,603,503 RGD:9068941
G Nfic nuclear factor I C JBrowse link NW_004955495 5,095,219 5,139,561 RGD:9068941
G Nfil3 nuclear factor, interleukin 3 regulated JBrowse link NW_004955515 908,313 910,159 RGD:9068941
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link NW_004955496 5,842,734 5,950,995 RGD:9068941
G Nfkb2 nuclear factor kappa B subunit 2 JBrowse link NW_004955485 7,994,730 8,001,776 RGD:9068941
G Nfya nuclear transcription factor Y subunit alpha JBrowse link NW_004955437 7,745,182 7,770,348 RGD:9068941
G Nfyb nuclear transcription factor Y subunit beta JBrowse link NW_004955405 38,773,690 38,789,534 RGD:9068941
G Nfyc nuclear transcription factor Y subunit gamma JBrowse link NW_004955537 544,534 611,459 RGD:9068941
G Nhlh2 nescient helix-loop-helix 2 JBrowse link NW_004955435 19,070,715 19,073,678 RGD:9068941
G Nkrf NFKB repressing factor JBrowse link NW_004955534 393,963 408,636 RGD:9068941
G Nkx1-1 NK1 homeobox 1 JBrowse link NW_004955514 763,160 781,635 RGD:9068941
G Nkx1-2 NK1 homeobox 2 JBrowse link NW_004955477 2,468,902 2,472,078 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004955409 24,612,490 24,616,360 RGD:9068941
G Nkx2-2 NK2 homeobox 2 JBrowse link NW_004955415 29,263,741 29,268,259 RGD:9068941
G Nkx2-3 NK2 homeobox 3 JBrowse link NW_004955507 5,454,871 5,457,247 RGD:9068941
G Nkx2-5 NK2 homeobox 5 JBrowse link NW_004955408 25,833,649 25,836,673 RGD:9068941
G Nkx2-6 NK2 homeobox 6 JBrowse link NW_004955403 46,831,758 46,836,358 RGD:9068941
G Nkx2-8 NK2 homeobox 8 JBrowse link NW_004955409 24,529,414 24,531,293 RGD:9068941
G Nkx3-1 NK3 homeobox 1 JBrowse link NW_004955403 46,807,846 46,809,924 RGD:9068941
G Nkx3-2 NK3 homeobox 2 JBrowse link NW_004955480 10,212,929 10,215,814 RGD:9068941
G Nkx6-1 NK6 homeobox 1 JBrowse link NW_004955474 5,211,281 5,214,785 RGD:9068941
G Nkx6-2 NK6 homeobox 2 JBrowse link NW_004955477 10,386,033 10,387,423 RGD:9068941
G Nkx6-3 NK6 homeobox 3 JBrowse link NW_004955536 1,241,110 1,245,504 RGD:9068941
G Nlrc5 NLR family CARD domain containing 5 JBrowse link NW_004955433 14,670,273 14,752,739 RGD:9068941
G Nono non-POU domain containing octamer binding JBrowse link NW_004955475 10,833,514 10,853,460 RGD:9068941
G Notch1 notch receptor 1 JBrowse link NW_004955513 4,225,939 4,264,875 RGD:9068941
G Noto notochord homeobox JBrowse link NW_004955424 12,424,984 12,431,562 RGD:9068941
G Npas2 neuronal PAS domain protein 2 JBrowse link NW_004955470 6,826,541 6,906,814 RGD:9068941
G Npas4 neuronal PAS domain protein 4 JBrowse link NW_004955422 18,907,328 18,913,088 RGD:9068941
G Nr1d1 nuclear receptor subfamily 1 group D member 1 JBrowse link NW_004955451 14,743,763 14,750,903 RGD:9068941
G Nr1d2 nuclear receptor subfamily 1 group D member 2 JBrowse link NW_004955430 15,812,449 15,834,341 RGD:9068941
G Nr1h2 nuclear receptor subfamily 1 group H member 2 JBrowse link NW_004955559 731,630 736,973 RGD:9068941
G Nr1h3 nuclear receptor subfamily 1 group H member 3 JBrowse link NW_004955422 940,310 954,170 RGD:9068941
G Nr1h4 nuclear receptor subfamily 1 group H member 4 JBrowse link NW_004955405 36,160,360 36,236,258 RGD:9068941
G Nr2c1 nuclear receptor subfamily 2 group C member 1 JBrowse link NW_004955405 31,637,832 31,693,621 RGD:9068941
G Nr2c2 nuclear receptor subfamily 2 group C member 2 JBrowse link NW_004955429 17,386,190 17,430,820 RGD:9068941
G Nr2e1 nuclear receptor subfamily 2 group E member 1 JBrowse link NW_004955411 33,303,765 33,325,221 RGD:9068941
G Nr2e3 nuclear receptor subfamily 2 group E member 3 JBrowse link NW_004955450 5,281,707 5,286,260 RGD:9068941
G Nr2f1 nuclear receptor subfamily 2 group F member 1 JBrowse link NW_004955418 18,615,548 18,622,984 RGD:9068941
G Nr2f6 nuclear receptor subfamily 2 group F member 6 JBrowse link NW_004955524 961,232 965,012 RGD:9068941
G Nr3c1 nuclear receptor subfamily 3 group C member 1 JBrowse link NW_004955415 10,494,704 10,585,778 RGD:9068941
G Nr4a1 nuclear receptor subfamily 4 group A member 1 JBrowse link NW_004955547 2,404,532 2,426,882 RGD:9068941
G Nr4a2 nuclear receptor subfamily 4 group A member 2 JBrowse link NW_004955449 16,928,780 16,944,536 RGD:9068941
G Nr4a3 nuclear receptor subfamily 4 group A member 3 JBrowse link NW_004955419 25,779,368 25,817,445 RGD:9068941
G Nr5a1 nuclear receptor subfamily 5 group A member 1 JBrowse link NW_004955419 3,632,248 3,654,367 RGD:9068941
G Nr5a2 nuclear receptor subfamily 5 group A member 2 JBrowse link NW_004955406 36,263,257 36,415,494 RGD:9068941
G Nr6a1 nuclear receptor subfamily 6 group A member 1 JBrowse link NW_004955419 3,425,406 3,624,315 RGD:9068941
G Nrf1 nuclear respiratory factor 1 JBrowse link NW_004955479 10,325,214 10,471,421 RGD:9068941
G Nrip1 nuclear receptor interacting protein 1 JBrowse link NW_004955407 16,740,253 16,820,297 RGD:9068941
G Nrl neural retina leucine zipper JBrowse link NW_004955409 36,279,996 36,313,824 RGD:9068941
G Nsd1 nuclear receptor binding SET domain protein 1 JBrowse link NW_004955408 29,416,393 29,547,444 RGD:9068941
G Onecut1 one cut homeobox 1 JBrowse link NW_004955409 2,181,364 2,214,636 RGD:9068941
G Onecut2 one cut homeobox 2 JBrowse link NW_004955402 41,782,281 41,839,782 RGD:9068941
G Otx1 orthodenticle homeobox 1 JBrowse link NW_004955424 21,140,038 21,147,268 RGD:9068941
G Otx2 orthodenticle homeobox 2 JBrowse link NW_004955466 10,755,143 10,764,957 RGD:9068941
G Ovol1 ovo like transcriptional repressor 1 JBrowse link NW_004955422 19,524,420 19,528,938 RGD:9068941
G Patz1 POZ/BTB and AT hook containing zinc finger 1 JBrowse link NW_004955455 5,544,841 5,566,630 RGD:9068941
G Pax1 paired box 1 JBrowse link NW_004955415 29,413,253 29,420,682 RGD:9068941
G Pax4 paired box 4 JBrowse link NW_004955479 8,660,089 8,664,463 RGD:9068941
G Pax5 paired box 5 JBrowse link NW_004955419 29,395,631 29,577,272 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004955476 10,058,979 10,074,668 RGD:9068941
G Pax8 paired box 8 JBrowse link NW_004955470 1,016,226 1,072,643 RGD:9068941
G Paxbp1 PAX3 and PAX7 binding protein 1 JBrowse link NW_004955407 32,178,837 32,210,470 RGD:9068941
G Pbx1 PBX homeobox 1 JBrowse link NW_004955462 11,777,168 12,083,068 RGD:9068941
G Pbx3 PBX homeobox 3 JBrowse link NW_004955419 2,419,081 2,624,299 RGD:9068941
G Pdx1 pancreatic and duodenal homeobox 1 JBrowse link NW_004955497 7,281,886 7,307,969 RGD:9068941
G Per1 period circadian regulator 1 JBrowse link NW_004955467 8,798,436 8,813,369 RGD:9068941
G Pgr progesterone receptor JBrowse link NW_004955412 4,643,839 4,693,478 RGD:9068941
G Phox2b paired like homeobox 2B JBrowse link NW_004955443 5,935,975 5,938,747 RGD:9068941
G Pitx1 paired like homeodomain 1 JBrowse link NW_004955408 30,197,374 30,202,887 RGD:9068941
G Pitx2 paired like homeodomain 2 JBrowse link NW_004955457 15,803,493 15,823,193 RGD:9068941
G Pitx3 paired like homeodomain 3 JBrowse link NW_004955485 8,130,244 8,140,292 RGD:9068941
G Pknox1 PBX/knotted 1 homeobox 1 JBrowse link NW_004955407 38,949,060 38,982,984 RGD:9068941
G Plag1 PLAG1 zinc finger JBrowse link NW_004955454 15,239,042 15,281,669 RGD:9068941
G Pou1f1 POU class 1 homeobox 1 JBrowse link NW_004955407 5,996,016 6,011,483 RGD:9068941
G Pou2af1 POU class 2 homeobox associating factor 1 JBrowse link NW_004955412 13,131,229 13,167,150 RGD:9068941
G Pou2f1 POU class 2 homeobox 1 JBrowse link NW_004955462 9,545,122 9,710,190 RGD:9068941
G Pou2f2 POU class 2 homeobox 2 JBrowse link NW_004955555 759,308 793,500 RGD:9068941
G Pou2f3 POU class 2 homeobox 3 JBrowse link NW_004955412 21,261,389 21,339,602 RGD:9068941
G Pou3f2 POU class 3 homeobox 2 JBrowse link NW_004955411 24,714,899 24,722,048 RGD:9068941
G Pou4f1 POU class 4 homeobox 1 JBrowse link NW_004955404 28,812,762 28,818,024 RGD:9068941
G Pou4f2 POU class 4 homeobox 2 JBrowse link NW_004955428 2,325,775 2,329,122 RGD:9068941
G Pou4f3 POU class 4 homeobox 3 JBrowse link NW_004955415 7,777,296 7,778,622 RGD:9068941
G Ppara peroxisome proliferator activated receptor alpha JBrowse link NW_004955413 30,306,563 30,366,245 RGD:9068941
G Prdm1 PR/SET domain 1 JBrowse link NW_004955411 31,434,503 31,455,995 RGD:9068941
G Prdm15 PR/SET domain 15 JBrowse link NW_004955407 39,680,757 39,714,917 RGD:9068941
G Prdm4 PR/SET domain 4 JBrowse link NW_004955405 41,335,019 41,354,625 RGD:9068941
G Prdm5 PR/SET domain 5 JBrowse link NW_004955428 19,684,721 19,881,716 RGD:9068941
G Prox1 prospero homeobox 1 JBrowse link NW_004955406 3,715,140 3,770,019 RGD:9068941
G Prrx1 paired related homeobox 1 JBrowse link NW_004955462 6,919,905 6,991,733 RGD:9068941
G Rad23b RAD23 homolog B, nucleotide excision repair protein JBrowse link NW_004955419 19,428,415 19,473,181 RGD:9068941
G Rax retina and anterior neural fold homeobox JBrowse link NW_004955402 43,408,933 43,414,697 RGD:9068941
G Rbbp4 RB binding protein 4, chromatin remodeling factor JBrowse link NW_004955452 10,955,399 10,975,036 RGD:9068941
G Rbmx RNA binding motif protein X-linked JBrowse link NW_004955489 8,280,842 8,286,252 RGD:9068941
G Rbpj recombination signal binding protein for immunoglobulin kappa J region JBrowse link NW_004955443 18,783,061 19,029,441 RGD:9068941
G Rbpjl recombination signal binding protein for immunoglobulin kappa J region like JBrowse link NW_004955445 12,017,500 12,029,507 RGD:9068941
G Rel REL proto-oncogene, NF-kB subunit JBrowse link NW_004955424 22,909,035 22,939,651 RGD:9068941
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link NW_004955422 19,602,930 19,612,263 RGD:9068941
G Relb RELB proto-oncogene, NF-kB subunit JBrowse link NW_004955555 2,060,533 2,086,229 RGD:9068941
G Rfx1 regulatory factor X1 JBrowse link NW_004955415 32,710,135 32,737,918 RGD:9068941
G Rfx2 regulatory factor X2 JBrowse link NW_004955495 3,414,737 3,485,393 RGD:9068941
G Rfx3 regulatory factor X3 JBrowse link NW_004955434 7,635,363 7,910,056 RGD:9068941
G Rfx4 regulatory factor X4 JBrowse link NW_004955405 40,483,391 40,648,992 RGD:9068941
G Rfx5 regulatory factor X5 JBrowse link NW_004955588 687,086 695,696 RGD:9068941
G Rfx6 regulatory factor X6 JBrowse link NW_004955436 213,810 278,699 RGD:9068941
G Rfx7 regulatory factor X7 JBrowse link NW_004955409 59,535 121,157 RGD:9068941
G Rfx8 RFX family member 8, lacking RFX DNA binding domain JBrowse link NW_004955470 7,128,811 7,191,466 RGD:9068941
G Rora RAR related orphan receptor A JBrowse link NW_004955450 14,262,199 14,434,611 RGD:9068941
G Rorb RAR related orphan receptor B JBrowse link NW_004955512 4,362,287 4,541,432 RGD:9068941
G Rorc RAR related orphan receptor C JBrowse link NW_004955589 590,653 616,784 RGD:9068941
G Rreb1 ras responsive element binding protein 1 JBrowse link NW_004955465 6,572,593 6,757,423 RGD:9068941
G Runx1 RUNX family transcription factor 1 JBrowse link NW_004955407 34,108,653 34,342,657 RGD:9068941
G Runx2 RUNX family transcription factor 2 JBrowse link NW_004955437 10,598,145 10,885,858 RGD:9068941
G Ruvbl2 RuvB like AAA ATPase 2 JBrowse link NW_004955559 1,657,241 1,674,272 RGD:9068941
G Rxra retinoid X receptor alpha JBrowse link NW_004955513 3,313,544 3,386,544 RGD:9068941
G Safb scaffold attachment factor B JBrowse link NW_004955495 3,743,673 3,775,073 RGD:9068941
G Sall1 spalt like transcription factor 1 JBrowse link NW_004955433 9,146,074 9,161,171 RGD:9068941
G Sarnp SAP domain containing ribonucleoprotein JBrowse link NW_004955458 3,396,443 3,451,193 RGD:9068941
G Sars1 seryl-tRNA synthetase 1 JBrowse link NW_004955435 12,642,485 12,659,833 RGD:9068941
G Satb2 SATB homeobox 2 JBrowse link NW_004955403 1,663,676 1,811,088 RGD:9068941
G Sfpq splicing factor proline and glutamine rich JBrowse link NW_004955452 13,267,968 13,283,823 RGD:9068941
G Sirt1 sirtuin 1 JBrowse link NW_004955425 20,280,725 20,307,663 RGD:9068941
G Six1 SIX homeobox 1 JBrowse link NW_004955466 8,961,597 8,966,069 RGD:9068941
G Six2 SIX homeobox 2 JBrowse link NW_004955441 12,029,530 12,033,214 RGD:9068941
G Six3 SIX homeobox 3 JBrowse link NW_004955441 11,966,389 11,978,545 RGD:9068941
G Six4 SIX homeobox 4 JBrowse link NW_004955466 8,902,728 8,915,685 RGD:9068941
G Six5 SIX homeobox 5 JBrowse link NW_004955574 221,635 225,474 RGD:9068941
G Six6 SIX homeobox 6 JBrowse link NW_004955466 9,120,227 9,122,109 RGD:9068941
G Skil SKI like proto-oncogene JBrowse link NW_004955420 530,531 554,308 RGD:9068941
G Smad1 SMAD family member 1 JBrowse link NW_004955428 1,357,398 1,429,521 RGD:9068941
G Smad2 SMAD family member 2 JBrowse link NW_004955402 33,131,760 33,217,144 RGD:9068941
G Smad3 SMAD family member 3 JBrowse link NW_004955450 8,747,651 8,842,003 RGD:9068941
G Smad4 SMAD family member 4 JBrowse link NW_004955402 35,956,080 36,001,746 RGD:9068941
G Smad5 SMAD family member 5 JBrowse link NW_004955408 31,183,727 31,228,355 RGD:9068941
G Smad6 SMAD family member 6 JBrowse link NW_004955450 9,005,332 9,070,790 RGD:9068941
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link NW_004955495 2,021,671 2,105,155 RGD:9068941
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link NW_004955455 8,420,263 8,457,105 RGD:9068941
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 JBrowse link NW_004955420 24,594,057 24,729,108 RGD:9068941
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 JBrowse link NW_004955458 3,764,823 3,787,159 RGD:9068941
G Smarcd2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 JBrowse link NW_004955478 7,984,736 7,996,843 RGD:9068941
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 JBrowse link NW_004955451 15,129,619 15,147,487 RGD:9068941
G Smyd3 SET and MYND domain containing 3 JBrowse link NW_004955406 8,768,365 9,417,612 RGD:9068941
G Snai3 snail family transcriptional repressor 3 JBrowse link NW_004955541 2,593,530 2,599,105 RGD:9068941
G Sox10 SRY-box transcription factor 10 JBrowse link NW_004955413 24,313,311 24,323,112 RGD:9068941
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004955487 2,678,961 2,680,869 RGD:9068941
G Sox15 SRY-box transcription factor 15 JBrowse link NW_004955467 9,333,620 9,335,498 RGD:9068941
G Sox18 SRY-box transcription factor 18 JBrowse link NW_004955528 204,729 206,772 RGD:9068941
G Sox21 SRY-box transcription factor 21 JBrowse link NW_004955404 15,181,866 15,184,317 RGD:9068941
G Sox4 SRY-box transcription factor 4 JBrowse link NW_004955483 5,076,664 5,077,059 RGD:9068941
G Sox6 SRY-box transcription factor 6 JBrowse link NW_004955414 30,965,626 31,532,473 RGD:9068941
G Sox9 SRY-box transcription factor 9 JBrowse link NW_004955478 941,684 945,563 RGD:9068941
G Sp1 Sp1 transcription factor JBrowse link NW_004955458 644,435 677,360 RGD:9068941
G Sp2 Sp2 transcription factor JBrowse link NW_004955451 13,205,463 13,231,181 RGD:9068941
G Sp3 Sp3 transcription factor JBrowse link NW_004955449 1,347,781 1,404,368 RGD:9068941
G Sp7 Sp7 transcription factor JBrowse link NW_004955458 583,981 602,856 RGD:9068941
G Spi1 Spi-1 proto-oncogene JBrowse link NW_004955422 873,735 886,560 RGD:9068941
G Spib Spi-B transcription factor JBrowse link NW_004955559 705,809 711,407 RGD:9068941
G Spic Spi-C transcription factor JBrowse link NW_004955405 36,946,481 36,956,472 RGD:9068941
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link NW_004955577 171,425 183,669 RGD:9068941
G Srebf2 sterol regulatory element binding transcription factor 2 JBrowse link NW_004955413 27,271,717 27,326,655 RGD:9068941
G Srf serum response factor JBrowse link NW_004955437 9,100,546 9,109,305 RGD:9068941
G St18 ST18 C2H2C-type zinc finger transcription factor JBrowse link NW_004955454 11,715,538 12,016,396 RGD:9068941
G Stat1 signal transducer and activator of transcription 1 JBrowse link NW_004955403 8,156,660 8,192,018 RGD:9068941
G Stat2 signal transducer and activator of transcription 2 JBrowse link NW_004955458 3,953,019 3,973,151 RGD:9068941
G Stat3 signal transducer and activator of transcription 3 JBrowse link NW_004955451 16,320,326 16,348,505 RGD:9068941
G Stat4 signal transducer and activator of transcription 4 JBrowse link NW_004955403 8,061,471 8,144,252 RGD:9068941
G Stat5a signal transducer and activator of transcription 5A JBrowse link NW_004955451 16,305,363 16,319,219 RGD:9068941
G Stat5b signal transducer and activator of transcription 5B JBrowse link NW_004955451 16,253,645 16,295,337 RGD:9068941
G Stat6 signal transducer and activator of transcription 6 JBrowse link NW_004955458 4,833,417 4,847,956 RGD:9068941
G Stk16 serine/threonine kinase 16 JBrowse link NW_004955453 14,182,167 14,185,569 RGD:9068941
G Sub1 SUB1 regulator of transcription JBrowse link NW_004955426 18,380,680 18,394,627 RGD:9068941
G Suz12 SUZ12 polycomb repressive complex 2 subunit JBrowse link NW_004955481 6,867,175 6,917,548 RGD:9068941
G Tardbp TAR DNA binding protein JBrowse link NW_004955486 2,656,121 2,674,808 RGD:9068941
G Tbp TATA-box binding protein JBrowse link NW_004955411 3,268,147 3,285,567 RGD:9068941
G Tbpl1 TATA-box binding protein like 1 JBrowse link NW_004955439 2,539,465 2,548,351 RGD:9068941
G Tbpl2 TATA-box binding protein like 2 JBrowse link NW_004955466 13,869,429 13,897,302 RGD:9068941
G Tbr1 T-box brain transcription factor 1 JBrowse link NW_004955449 12,293,534 12,301,440 RGD:9068941
G Tbx15 T-box transcription factor 15 JBrowse link NW_004955435 21,874,154 21,993,510 RGD:9068941
G Tbx19 T-box transcription factor 19 JBrowse link NW_004955462 8,830,280 8,856,721 RGD:9068941
G Tbx2 T-box transcription factor 2 JBrowse link NW_004955451 2,458,612 2,466,264 RGD:9068941
G Tbx20 T-box transcription factor 20 JBrowse link NW_004955460 7,794,313 7,856,906 RGD:9068941
G Tbx3 T-box transcription factor 3 JBrowse link NW_004955455 15,988,153 16,000,156 RGD:9068941
G Tbx5 T-box transcription factor 5 JBrowse link NW_004955455 16,133,130 16,217,894 RGD:9068941
G Tbx6 T-box transcription factor 6 JBrowse link NW_004955493 6,888,832 6,894,840 RGD:9068941
G Tbxt T-box transcription factor T JBrowse link NW_004955439 15,675,680 15,683,542 RGD:9068941
G Tcf12 transcription factor 12 JBrowse link NW_004955450 16,979,990 17,375,264 RGD:9068941
G Tcf15 transcription factor 15 JBrowse link NW_004955597 446,489 452,003 RGD:9068941
G Tcf3 transcription factor 3 JBrowse link NW_004955495 6,337,311 6,365,193 RGD:9068941
G Tcf4 transcription factor 4 JBrowse link NW_004955402 39,735,596 40,066,151 RGD:9068941
G Tcf7 transcription factor 7 JBrowse link NW_004955408 5,362,423 5,388,684 RGD:9068941
G Tcf7l2 transcription factor 7 like 2 JBrowse link NW_004955431 18,020,309 18,207,926 RGD:9068941
G Tcfl5 transcription factor like 5 JBrowse link NW_004955528 1,269,387 1,286,124 RGD:9068941
G Tead1 TEA domain transcription factor 1 JBrowse link NW_004955414 28,166,562 28,341,275 RGD:9068941
G Tead2 TEA domain transcription factor 2 JBrowse link NW_004955559 1,450,706 1,465,947 RGD:9068941
G Tfap2a transcription factor AP-2 alpha JBrowse link NW_004955465 3,877,896 3,900,259 RGD:9068941
G Tfap2b transcription factor AP-2 beta JBrowse link NW_004955411 7,143,095 7,171,285 RGD:9068941
G Tfap2c transcription factor AP-2 gamma JBrowse link NW_004955445 2,626,896 2,636,607 RGD:9068941
G Tfap2e transcription factor AP-2 epsilon JBrowse link NW_004955452 13,666,712 13,682,063 RGD:9068941
G Tfcp2 transcription factor CP2 JBrowse link NW_004955547 1,608,631 1,675,331 RGD:9068941
G Tfe3 transcription factor binding to IGHM enhancer 3 JBrowse link NW_004955543 547,037 561,073 RGD:9068941
G Tfec transcription factor EC JBrowse link NW_004955432 21,751,697 21,813,199 RGD:9068941
G Tgif1 TGFB induced factor homeobox 1 JBrowse link NW_004955402 7,130,809 7,138,945 RGD:9068941
G Thap1 THAP domain containing 1 JBrowse link NW_004955457 13,077,015 13,088,406 RGD:9068941
G Thap11 THAP domain containing 11 JBrowse link NW_004955484 8,857,015 8,859,091 RGD:9068941
G Thrap3 thyroid hormone receptor associated protein 3 JBrowse link NW_004955452 14,233,155 14,282,521 RGD:9068941
G Tlx1 T cell leukemia homeobox 1 JBrowse link NW_004955485 9,070,601 9,076,063 RGD:9068941
G Top1 DNA topoisomerase I JBrowse link NW_004955445 15,834,017 15,922,785 RGD:9068941
G Tox2 TOX high mobility group box family member 2 JBrowse link NW_004955445 13,210,606 13,343,344 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:9068941
G Tp73 tumor protein p73 JBrowse link NW_004955486 7,914,608 7,961,992 RGD:9068941
G Txk TXK tyrosine kinase JBrowse link NW_004955443 474,099 556,697 RGD:9068941
G Usp3 ubiquitin specific peptidase 3 JBrowse link NW_004955450 11,729,433 11,802,462 RGD:9068941
G Vax1 ventral anterior homeobox 1 JBrowse link NW_004955431 21,853,636 21,857,547 RGD:9068941
G Vax2 ventral anterior homeobox 2 JBrowse link NW_004955424 14,283,336 14,309,809 RGD:9068941
G Ventx VENT homeobox JBrowse link NW_004955477 10,945,539 10,948,735 RGD:9068941
G Wbp2 WW domain binding protein 2 JBrowse link NW_004955506 6,398,411 6,406,970 RGD:9068941
G Xbp1 X-box binding protein 1 JBrowse link NW_004955455 3,037,885 3,041,827 RGD:9068941
G Yap1 Yes1 associated transcriptional regulator JBrowse link NW_004955412 5,423,866 5,533,728 RGD:9068941
G Ybx1 Y-box binding protein 1 JBrowse link NW_004955537 2,234,052 2,254,528 RGD:9068941
G Yy1 YY1 transcription factor JBrowse link NW_004955438 21,341,374 21,377,674 RGD:9068941
G Zbed1 zinc finger BED-type containing 1 JBrowse link NW_004955499 1,484,850 1,487,143 RGD:9068941
G Zbtb14 zinc finger and BTB domain containing 14 JBrowse link NW_004955402 5,750,877 5,757,370 RGD:9068941
G Zbtb16 zinc finger and BTB domain containing 16 JBrowse link NW_004955412 15,668,332 15,845,384 RGD:9068941
G Zbtb17 zinc finger and BTB domain containing 17 JBrowse link NW_004955527 2,252,118 2,278,127 RGD:9068941
G Zbtb2 zinc finger and BTB domain containing 2 JBrowse link NW_004955439 10,220,204 10,231,065 RGD:9068941
G Zbtb7a zinc finger and BTB domain containing 7A JBrowse link NW_004955495 4,747,905 4,754,066 RGD:9068941
G Zbtb7b zinc finger and BTB domain containing 7B JBrowse link NW_004955545 1,504,656 1,519,954 RGD:9068941
G Zfhx2 zinc finger homeobox 2 JBrowse link NW_004955409 36,810,188 36,843,108 RGD:9068941
G Zfhx3 zinc finger homeobox 3 JBrowse link NW_004955484 5,470,203 5,746,325 RGD:9068941
G Zfhx4 zinc finger homeobox 4 JBrowse link NW_004955444 3,938,830 4,116,076 RGD:9068941
G Zfp42 ZFP42 zinc finger protein JBrowse link NW_004955403 21,222,129 21,227,341 RGD:9068941
G Zfpm1 zinc finger protein, FOG family member 1 JBrowse link NW_004955541 2,461,690 2,495,614 RGD:9068941
G Zgpat zinc finger CCCH-type and G-patch domain containing JBrowse link NW_004955528 493,051 519,780 RGD:9068941
G Zic1 Zic family member 1 JBrowse link NW_004955474 10,029,226 10,033,104 RGD:9068941
G Zic3 Zic family member 3 JBrowse link NW_004955489 7,560,684 7,571,739 RGD:9068941
G Znf143 zinc finger protein 143 JBrowse link NW_004955414 25,220,574 25,252,962 RGD:9068941
G Znf148 zinc finger protein 148 JBrowse link NW_004955427 24,294,926 24,430,697 RGD:9068941
G Znf202 zinc finger protein 202 JBrowse link NW_004955412 24,469,313 24,481,551 RGD:9068941
G Znf217 zinc finger protein 217 JBrowse link NW_004955445 5,326,905 5,337,573 RGD:9068941
G Znf219 zinc finger protein 219 JBrowse link NW_004955550 1,854,330 1,861,836 RGD:9068941
G Znf239 zinc finger protein 239 JBrowse link NW_004955546 1,451,303 1,466,845 RGD:9068941
G Znf277 zinc finger protein 277 JBrowse link NW_004955410 15,971,524 16,083,482 RGD:9068941
G Znf281 zinc finger protein 281 JBrowse link NW_004955406 36,592,771 36,599,543 RGD:9068941
G Znf335 zinc finger protein 335 JBrowse link NW_004955445 11,334,742 11,354,584 RGD:9068941
G Znf395 zinc finger protein 395 JBrowse link NW_004955403 50,761,334 50,772,286 RGD:9068941
G Znf536 zinc finger protein 536 JBrowse link NW_004955468 7,049,301 7,488,706 RGD:9068941
G Znf639 zinc finger protein 639 JBrowse link NW_004955420 8,513,192 8,522,689 RGD:9068941
G Znf668 zinc finger protein 668 JBrowse link NW_004955493 7,902,527 7,911,616 RGD:9068941
G Znf683 zinc finger protein 683 JBrowse link NW_004955452 5,748,569 5,758,389 RGD:9068941
G Znf692 zinc finger protein 692 JBrowse link NW_004955418 29,910,084 29,915,013 RGD:9068941
G Znf746 zinc finger protein 746 JBrowse link NW_004955491 4,619,962 4,642,357 RGD:9068941
G Znf750 zinc finger protein 750 JBrowse link NW_004955506 352,616 360,802 RGD:9068941
RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cebpg CCAAT enhancer binding protein gamma JBrowse link NW_004955468 3,137,106 3,141,733 RGD:9068941
RNA polymerase II core promoter sequence-specific DNA binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G App amyloid beta precursor protein JBrowse link NW_004955407 25,725,259 25,973,582 RGD:9068941
G Cebpb CCAAT enhancer binding protein beta JBrowse link NW_004955445 8,060,432 8,061,289 RGD:9068941
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link NW_004955491 4,215,353 4,292,229 RGD:9068941
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link NW_004955523 307,181 310,728 RGD:9068941
G Gbx2 gastrulation brain homeobox 2 JBrowse link NW_004955453 538,066 541,415 RGD:9068941
G Gtf2b general transcription factor IIB JBrowse link NW_004955423 5,420,795 5,447,148 RGD:9068941
G H3f3a H3 histone, family 3A JBrowse link NW_004955489 269,900 278,398 RGD:9068941
G H3f3b H3 histone, family 3B JBrowse link NW_004955506 6,475,336 6,478,781 RGD:9068941
G Hdac1 histone deacetylase 1 JBrowse link NW_004955452 10,636,366 10,668,873 RGD:9068941
G Kdm3a lysine demethylase 3A JBrowse link NW_004955424 1,164,384 1,218,607 RGD:9068941
G LOC102008188 core histone macro-H2A.1 JBrowse link NW_004955408 30,497,531 30,550,095 RGD:9068941
G LOC102021365 histone H2A.Z JBrowse link NW_004955496 7,733,910 7,735,525 RGD:9068941
G Nrf1 nuclear respiratory factor 1 JBrowse link NW_004955479 10,325,214 10,471,421 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004955476 10,058,979 10,074,668 RGD:9068941
G Pou2af1 POU class 2 homeobox associating factor 1 JBrowse link NW_004955412 13,131,229 13,167,150 RGD:9068941
G Pou2f1 POU class 2 homeobox 1 JBrowse link NW_004955462 9,545,122 9,710,190 RGD:9068941
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link NW_004955422 19,602,930 19,612,263 RGD:9068941
G Ruvbl2 RuvB like AAA ATPase 2 JBrowse link NW_004955559 1,657,241 1,674,272 RGD:9068941
G Sox3 SRY-box transcription factor 3 JBrowse link NW_004955489 4,817,753 4,819,858 RGD:9068941
G Sox8 SRY-box transcription factor 8 JBrowse link NW_004955442 16,236,286 16,241,093 RGD:9068941
G Stat1 signal transducer and activator of transcription 1 JBrowse link NW_004955403 8,156,660 8,192,018 RGD:9068941
G Tbp TATA-box binding protein JBrowse link NW_004955411 3,268,147 3,285,567 RGD:9068941
G Tbpl1 TATA-box binding protein like 1 JBrowse link NW_004955439 2,539,465 2,548,351 RGD:9068941
G Tbpl2 TATA-box binding protein like 2 JBrowse link NW_004955466 13,869,429 13,897,302 RGD:9068941
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Emx1 empty spiracles homeobox 1 JBrowse link NW_004955424 12,666,280 12,683,023 RGD:9068941
G Emx2 empty spiracles homeobox 2 JBrowse link NW_004955431 22,192,446 22,199,141 RGD:9068941
G Gsx1 GS homeobox 1 JBrowse link NW_004955497 7,167,915 7,169,177 RGD:9068941
G Hsf1 heat shock transcription factor 1 JBrowse link NW_004955454 2,907,265 2,932,352 RGD:9068941
G Hsf2 heat shock transcription factor 2 JBrowse link NW_004955436 4,387,498 4,406,719 RGD:9068941
G Ncoa2 nuclear receptor coactivator 2 JBrowse link NW_004955444 9,313,748 9,587,109 RGD:9068941
G Noto notochord homeobox JBrowse link NW_004955424 12,424,984 12,431,562 RGD:9068941
G Rxra retinoid X receptor alpha JBrowse link NW_004955513 3,313,544 3,386,544 RGD:9068941
G Smyd3 SET and MYND domain containing 3 JBrowse link NW_004955406 8,768,365 9,417,612 RGD:9068941
G Vax1 ventral anterior homeobox 1 JBrowse link NW_004955431 21,853,636 21,857,547 RGD:9068941
G Vax2 ventral anterior homeobox 2 JBrowse link NW_004955424 14,283,336 14,309,809 RGD:9068941
G Zc3h8 zinc finger CCCH-type containing 8 JBrowse link NW_004955470 1,888,903 1,913,077 RGD:9068941
serum response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Srf serum response factor JBrowse link NW_004955437 9,100,546 9,109,305 RGD:9068941
sterol response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr1h3 nuclear receptor subfamily 1 group H member 3 JBrowse link NW_004955422 940,310 954,170 RGD:9068941
G Srebf1 sterol regulatory element binding transcription factor 1 JBrowse link NW_004955577 171,425 183,669 RGD:9068941
vitamin D response element binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rxra retinoid X receptor alpha JBrowse link NW_004955513 3,313,544 3,386,544 RGD:9068941
G Tcf3 transcription factor 3 JBrowse link NW_004955495 6,337,311 6,365,193 RGD:9068941
G Vdr vitamin D receptor JBrowse link NW_004955500 6,745,725 6,798,052 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 14671
    binding 13055
      organic cyclic compound binding 5241
        nucleic acid binding 3422
          DNA binding 2034
            transcription regulatory region DNA binding 921
              RNA polymerase II regulatory region DNA binding 778
                RNA polymerase II regulatory region sequence-specific DNA binding 771
                  RNA polymerase II cis-regulatory region sequence-specific DNA binding + 584
                  RNA polymerase II core promoter sequence-specific DNA binding 24
                  RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding 12
Path 2
Term Annotations click to browse term
  molecular_function 14671
    binding 13055
      heterocyclic compound binding 5166
        nucleic acid binding 3422
          DNA binding 2034
            double-stranded DNA binding 949
              sequence-specific double-stranded DNA binding 861
                transcription regulatory region sequence-specific DNA binding 816
                  RNA polymerase II regulatory region sequence-specific DNA binding 771
                    RNA polymerase II cis-regulatory region sequence-specific DNA binding + 584
                    RNA polymerase II core promoter sequence-specific DNA binding 24
                    RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.