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ONTOLOGY REPORT - ANNOTATIONS

Term:transcription cis-regulatory region binding
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Accession:GO:0000976 term browser browse the term
Definition:Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
Comment:Note that this term is meant to also capture non-specific binding to regulatory regions. Also, to minimize ambiguity in the use of the word "promoter" in GO, we have chosen the phrase "transcription regulatory region" to refer to all of the regulatory regions. Regulatory regions in the DNA which control initiation may include the "core promoter" where the basal transcription machinery binds, the "core promoter proximal region" where regulatory factors other than the basal machinery bind. There are also additional regulatory regions, in both the DNA and the RNA transcript, which regulate elongation or termination of transcription.
Synonyms:exact_synonym: transcription regulatory region sequence-specific DNA binding
 narrow_synonym: bacterial-type RNA polymerase regulatory region DNA binding;   bacterial-type RNA polymerase transcription regulatory region sequence-specific DNA binding;   eubacterial-type RNA polymerase regulatory region DNA binding;   eubacterial-type RNA polymerase regulatory region sequence-specific DNA binding
 broad_synonym: regulatory region DNA binding
 related_synonym: transcription regulatory region DNA binding
 alt_id: GO:0000975;   GO:0000984;   GO:0001017;   GO:0044212

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transcription cis-regulatory region binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 enables ISO (MGI:5494393|PMID:22053081)
(PMID:22053081)		 BHF-UCL PMID:22053081 MGI:5494393 NCBI chrNW_004624764:18,904,607...18,940,594
Ensembl chrNW_004624764:18,904,639...18,940,594 		JBrowse link
G Ahr aryl hydrocarbon receptor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:12,939,183...12,987,574
Ensembl chrNW_004624739:12,942,165...12,987,973 		JBrowse link
G Ahrr aryl-hydrocarbon receptor repressor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:128,596...212,170
Ensembl chrNW_004624751:139,085...209,546 		JBrowse link
G Ar androgen receptor enables ISO (PMID:12799378), (PMID:18487222), (PMID:19886863) UniProt PMID:12799378 PMID:18487222 PMID:19886863 NCBI chrNW_004624891:3,135,824...3,330,487
Ensembl chrNW_004624891:3,138,848...3,329,459 		JBrowse link
G Arid4a AT-rich interaction domain 4A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624884:3,360,461...3,434,622 JBrowse link
G Arid4b AT-rich interaction domain 4B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624775:15,152,840...15,300,160
Ensembl chrNW_004624775:15,152,950...15,301,078 		JBrowse link
G Arid5a AT-rich interaction domain 5A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:2,491,162...2,504,580
Ensembl chrNW_004624749:2,491,156...2,506,110 		JBrowse link
G Arid5b AT-rich interaction domain 5B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624791:1,610,169...1,785,512
Ensembl chrNW_004624791:1,610,169...1,785,477 		JBrowse link
G Ash2l ASH2 like, histone lysine methyltransferase complex subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624780:5,502,708...5,531,541
Ensembl chrNW_004624780:5,502,512...5,531,446 		JBrowse link
G Atf3 activating transcription factor 3 enables ISO (PMID:24939851) ParkinsonsUK-UCL PMID:24939851 NCBI chrNW_004624771:18,009,111...18,060,796
Ensembl chrNW_004624771:18,050,039...18,060,802 		JBrowse link
G Atf4 activating transcription factor 4 contributes_to
enables		 ISO
IEA		 (PMID:12871976) ParkinsonsUK-UCL
Ensembl		 PMID:12871976 GO_REF:0000107 NCBI chrNW_004624752:8,822,955...8,825,019
Ensembl chrNW_004624752:8,822,740...8,825,032 		JBrowse link
G Atf5 activating transcription factor 5 enables ISO (MGI:5688824|PMID:24216764)
(PMID:24216764)
PMID:19531563		 UniProt PMID:19531563 PMID:24216764 MGI:5688824 RGD:10400874 NCBI chrNW_004624832:4,400,586...4,405,203
Ensembl chrNW_004624832:4,396,604...4,405,185 		JBrowse link
G Atf6 activating transcription factor 6 enables ISO (PMID:16469704) ParkinsonsUK-UCL PMID:16469704 NCBI chrNW_004624826:189,899...412,540
Ensembl chrNW_004624826:190,131...412,197 		JBrowse link
G Atf6b activating transcription factor 6 beta enables ISO (PMID:11256944) ParkinsonsUK-UCL PMID:11256944 NCBI chrNW_004624754:24,185,203...24,194,351
Ensembl chrNW_004624754:24,184,261...24,194,904 		JBrowse link
G Atf7 activating transcription factor 7 enables ISO (PMID:17264123) UniProt PMID:17264123 NCBI chrNW_004624904:1,604,083...1,705,739
Ensembl chrNW_004624904:1,613,487...1,706,549 		JBrowse link
G Atmin ATM interactor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:6,290,715...6,305,780
Ensembl chrNW_004624746:6,293,132...6,306,426 		JBrowse link
G Atoh7 atonal bHLH transcription factor 7 enables ISO (PMID:31696227)
(PMID:33712461)
(MGI:6727566|PMID:33712461)		 UniProt PMID:31696227 PMID:33712461 MGI:6727566 NCBI chrNW_004624754:2,606,689...2,610,231
Ensembl chrNW_004624754:2,605,173...2,650,354 		JBrowse link
G Bahd1 bromo adjacent homology domain containing 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624804:7,741,141...7,767,049
Ensembl chrNW_004624804:7,742,217...7,769,108 		JBrowse link
G Basp1 brain abundant membrane attached signal protein 1 enables ISO (MGI:4418604|PMID:19050011)
(PMID:19050011)		 UniProt PMID:19050011 MGI:4418604 NCBI chrNW_004624751:13,959,095...13,998,887
Ensembl chrNW_004624751:13,859,959...13,999,066 		JBrowse link
G Bcor BCL6 corepressor enables ISO (PMID:19578371) UniProt PMID:19578371 NCBI chrNW_004624762:15,338,331...15,465,683
Ensembl chrNW_004624762:15,420,596...15,465,873 		JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables ISO (MGI:5014424|PMID:21680841)
(PMID:21680841)		 UniProt PMID:21680841 MGI:5014424 NCBI chrNW_004624766:5,295,120...5,391,645
Ensembl chrNW_004624766:5,317,635...5,391,645 		JBrowse link
G Brca1 BRCA1 DNA repair associated enables ISO (MGI:5009779|PMID:20820192)
(PMID:20820192)		 BHF-UCL PMID:20820192 MGI:5009779 NCBI chrNW_004624795:1,186,043...1,238,986
Ensembl chrNW_004624795:1,188,136...1,241,964 		JBrowse link
G Brd4 bromodomain containing 4 enables ISO (PMID:23086925) UniProt PMID:23086925 NCBI chrNW_004624901:2,348,218...2,434,429
Ensembl chrNW_004624901:2,346,734...2,380,852 		JBrowse link
G Brd7 bromodomain containing 7 enables ISO (PMID:20228809) UniProt PMID:20228809 NCBI chrNW_004624757:6,294,559...6,335,401
Ensembl chrNW_004624757:6,294,415...6,335,285 		JBrowse link
G Calcoco1 calcium binding and coiled-coil domain 1 enables ISO (PMID:16344550) AgBase PMID:16344550 NCBI chrNW_004624904:1,792,861...1,809,265
Ensembl chrNW_004624904:1,790,587...1,809,277 		JBrowse link
G Carm1 coactivator associated arginine methyltransferase 1 enables ISO (MGI:4887324|PMID:18188184)
(PMID:18188184)		 UniProt PMID:18188184 MGI:4887324 NCBI chrNW_004624828:2,833,011...2,872,281
Ensembl chrNW_004624828:2,832,769...2,871,167 		JBrowse link
G Cbx3 chromobox 3 enables ISO (MGI:5569417|PMID:24413057)
(PMID:24413057)		 UniProt PMID:24413057 MGI:5569417 NCBI chrNW_004624739:4,331,948...4,342,353
Ensembl chrNW_004624739:4,332,975...4,343,155 		JBrowse link
G Cbx4 chromobox 4 enables ISO (PMID:20417598) MGI PMID:20417598 NCBI chrNW_004624801:9,002,290...9,008,305
Ensembl chrNW_004624801:9,003,059...9,008,203 		JBrowse link
G Ccnt1 cyclin T1 enables ISO (MGI:4834059|PMID:20570862)
(PMID:20570862)		 BHF-UCL PMID:20570862 MGI:4834059 NCBI chrNW_004624816:3,396,740...3,445,976
Ensembl chrNW_004624816:3,421,709...3,442,170 		JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:14,736,273...14,930,168
Ensembl chrNW_004624760:14,736,104...14,930,119 		JBrowse link
G Cdk9 cyclin dependent kinase 9 enables ISO (MGI:4834059|PMID:20570862)
(PMID:20570862)		 BHF-UCL PMID:20570862 MGI:4834059 NCBI chrNW_004624760:7,760,474...7,765,711 JBrowse link
G Cdx1 caudal type homeobox 1 enables ISO (PMID:24623306) UniProt PMID:24623306 NCBI chrNW_004624774:9,479,173...9,494,962
Ensembl chrNW_004624774:9,479,255...9,494,061 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha enables ISO (PMID:12695546), (PMID:28186500)
(PMID:18632661)		 UniProt
MGI		 PMID:12695546 PMID:18632661 PMID:28186500 NCBI chrNW_004624794:9,809,007...9,813,418 JBrowse link
G Cebpb CCAAT enhancer binding protein beta enables ISO (MGI:5688824|PMID:24216764)
(PMID:30355733)		 UniProt
ARUK-UCL		 PMID:24216764 PMID:30355733 MGI:5688824 NCBI chrNW_004624790:5,367,808...5,369,686
Ensembl chrNW_004624790:5,368,349...5,369,377 		JBrowse link
G Cebpd CCAAT enhancer binding protein delta enables ISO (PMID:18632661) MGI PMID:18632661 NCBI chrNW_004624735:7,721,564...7,722,823
Ensembl chrNW_004624735:7,721,633...7,722,445 		JBrowse link
G Ciart circadian associated repressor of transcription enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624772:18,036,407...18,040,571
Ensembl chrNW_004624772:18,037,066...18,040,692 		JBrowse link
G Ciita class II major histocompatibility complex transactivator enables ISO (PMID:19041327) BHF-UCL PMID:19041327 NCBI chrNW_004624824:8,099,877...8,156,661
Ensembl chrNW_004624824:8,116,537...8,153,482 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:16382163 PMID:21367864 RGD:10059371 RGD:7247438 NCBI chrNW_004624765:8,374,160...8,436,969 JBrowse link
G Creb3l1 cAMP responsive element binding protein 3 like 1 enables ISO PMID:15665855
(PMID:15665855)
(MGI:5616321|PMID:15665855)		 ParkinsonsUK-UCL PMID:15665855 MGI:5616321 RGD:1558627 NCBI chrNW_004624767:2,215,850...2,247,470
Ensembl chrNW_004624767:2,215,558...2,247,509 		JBrowse link
G Creb3l2 cAMP responsive element binding protein 3 like 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624765:18,152,099...18,275,614
Ensembl chrNW_004624765:18,157,132...18,276,029 		JBrowse link
G Creb3l3 cAMP responsive element binding protein 3 like 3 enables ISO (PMID:16469704) ParkinsonsUK-UCL PMID:16469704 NCBI chrNW_004624828:5,450,265...5,468,079 JBrowse link
G Cry2 cryptochrome circadian regulator 2 enables ISO (MGI:5014424|PMID:21680841) UniProt PMID:21680841 MGI:5014424 NCBI chrNW_004624767:2,622,786...2,652,663
Ensembl chrNW_004624767:2,621,311...2,653,071 		JBrowse link
G Ctcf CCCTC-binding factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:18,705,017...18,760,345
Ensembl chrNW_004624746:18,706,663...18,760,203 		JBrowse link
G Ctcfl CCCTC-binding factor like enables ISO (PMID:18413740) UniProt PMID:18413740 NCBI chrNW_004624741:23,924,124...23,948,849
Ensembl chrNW_004624741:23,925,326...23,948,819 		JBrowse link
G Ddit3 DNA damage inducible transcript 3 enables ISO (MGI:3525819|PMID:15601821)
(PMID:15601821)
(PMID:24939851)		 ParkinsonsUK-UCL PMID:15601821 PMID:24939851 MGI:3525819 NCBI chrNW_004624802:10,437,998...10,443,278 JBrowse link
G Dhx36 DEAH-box helicase 36 enables ISO (MGI:5559667|PMID:21590736) UniProt PMID:21590736 MGI:5559667 NCBI chrNW_004624730:31,857,157...31,913,985
Ensembl chrNW_004624730:31,855,992...31,914,253 		JBrowse link
G Dlx2 distal-less homeobox 2 enables ISO (MGI:6874923|PMID:23371388) UniProt PMID:23371388 MGI:6874923 NCBI chrNW_004624787:9,528,942...9,532,252
Ensembl chrNW_004624787:9,530,034...9,533,109 		JBrowse link
G Dlx3 distal-less homeobox 3 enables ISO (MGI:6874923|PMID:23371388)
(PMID:23371388)		 UniProt PMID:23371388 MGI:6874923 NCBI chrNW_004624795:6,014,044...6,018,819
Ensembl chrNW_004624795:6,015,523...6,018,684 		JBrowse link
G Dlx5 distal-less homeobox 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624813:3,760,890...3,765,309
Ensembl chrNW_004624813:3,760,661...3,765,517 		JBrowse link
G E2f1 E2F transcription factor 1 enables ISO (PMID:24014029) MGI PMID:24014029 NCBI chrNW_004624842:5,602,432...5,612,951
Ensembl chrNW_004624842:5,602,432...5,612,951 		JBrowse link
G Egr1 early growth response 1 enables ISO (MGI:4834991|PMID:18281035)
(PMID:18281035)
(PMID:18718911)		 BHF-UCL
UniProt		 PMID:18281035 PMID:18718911 MGI:4834991 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205 		JBrowse link
G Egr2 early growth response 2 enables ISO (MGI:3768327|PMID:17938205)
(PMID:17938205)		 UniProt PMID:17938205 MGI:3768327 NCBI chrNW_004624791:953,009...959,656
Ensembl chrNW_004624791:955,161...959,791 		JBrowse link
G Elk1 ETS transcription factor ELK1 enables ISO (PMID:31146003) ARUK-UCL PMID:31146003 NCBI chrNW_004624978:194,985...208,105
Ensembl chrNW_004624978:194,992...208,103 		JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624765:3,612,781...4,742,219
Ensembl chrNW_004624765:3,613,379...4,734,585 		JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor enables ISO (PMID:31146003) ARUK-UCL PMID:31146003 NCBI chrNW_004624812:2,795,961...2,920,263
Ensembl chrNW_004624812:2,795,686...2,920,274 		JBrowse link
G Etv5 ETS variant transcription factor 5 enables ISO (PMID:19443906) UniProt PMID:19443906 NCBI chrNW_004624730:70,631,654...70,699,768
Ensembl chrNW_004624730:70,631,637...70,699,863 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:22821416 RGD:7242953 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196 		JBrowse link
G Fezf1 FEZ family zinc finger 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624783:13,715,987...13,719,287
Ensembl chrNW_004624783:13,713,422...13,718,604 		JBrowse link
G Fezf2 FEZ family zinc finger 2 enables ISO (MGI:5908758|PMID:28245922)
(PMID:28245922)		 UniProt PMID:28245922 MGI:5908758 NCBI chrNW_004624888:3,462,132...3,467,701
Ensembl chrNW_004624888:3,462,233...3,468,293 		JBrowse link
G Fli1 Fli-1 proto-oncogene, ETS transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624812:3,004,631...3,138,901
Ensembl chrNW_004624812:3,004,628...3,139,101 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:26,424,053...26,427,431
Ensembl chrNW_004624734:26,423,079...26,427,732 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit enables ISO (PMID:22326952), (PMID:22990073) RGD
MGI		 PMID:21367864 PMID:22326952 PMID:22990073 RGD:7247438 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623 		JBrowse link
G Foxa1 forkhead box A1 enables ISO (PMID:16087863), (PMID:16331276), (PMID:19127412) UniProt PMID:16087863 PMID:16331276 PMID:19127412 NCBI chrNW_004624955:234,289...239,541
Ensembl chrNW_004624955:231,506...239,508 		JBrowse link
G Foxa2 forkhead box A2 enables ISO (PMID:15737987) UniProt PMID:15737987 NCBI chrNW_004624741:22,645,580...22,649,722
Ensembl chrNW_004624741:22,645,519...22,649,854 		JBrowse link
G Foxa3 forkhead box A3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:7,339,612...7,350,651
Ensembl chrNW_004624832:7,338,478...7,350,658 		JBrowse link
G Foxc1 forkhead box C1 enables ISO (MGI:3813419|PMID:18579532)
(PMID:18579532)
(PMID:17210863), (PMID:19279310), (PMID:25786029), (PMID:27804176)		 BHF-UCL
UniProt		 PMID:17210863 PMID:18579532 PMID:19279310 PMID:25786029 PMID:27804176 MGI:3813419 NCBI chrNW_004624756:23,060,065...23,062,407
Ensembl chrNW_004624756:23,060,751...23,062,343 		JBrowse link
G Foxc2 forkhead box C2 enables ISO (MGI:3813419|PMID:18579532) BHF-UCL PMID:18579532 MGI:3813419 NCBI chrNW_004624746:2,632,547...2,634,867
Ensembl chrNW_004624746:2,632,619...2,634,085 		JBrowse link
G Foxf1 forkhead box F1 enables ISO (PMID:17261592), (PMID:7958446) MGI PMID:7958446 PMID:17261592 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
G Foxh1 forkhead box H1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:12,384,728...12,388,234
Ensembl chrNW_004624735:12,386,281...12,387,774 		JBrowse link
G Foxi1 forkhead box I1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:19,860,586...19,864,522
Ensembl chrNW_004624733:19,859,972...19,864,359 		JBrowse link
G Foxj1 forkhead box J1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:6,025,756...6,030,487
Ensembl chrNW_004624801:6,025,793...6,030,486 		JBrowse link
G Foxk1 forkhead box K1 enables ISO (PMID:17670796), (PMID:25402684), (PMID:29861159) UniProt PMID:17670796 PMID:25402684 PMID:29861159 NCBI chrNW_004624740:28,533,708...28,585,880
Ensembl chrNW_004624740:28,538,745...28,585,886 		JBrowse link
G Foxk2 forkhead box K2 enables ISO (PMID:22083952) UniProt PMID:22083952 NCBI chrNW_004624801:11,260,838...11,303,656
Ensembl chrNW_004624801:11,260,836...11,304,773 		JBrowse link
G Foxm1 forkhead box M1 enables ISO (PMID:17261592) MGI PMID:17261592 NCBI chrNW_004624860:206,367...222,035
Ensembl chrNW_004624860:207,242...219,959 		JBrowse link
G Foxn1 forkhead box N1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:1,114,305...1,127,787
Ensembl chrNW_004624786:1,114,305...1,127,683 		JBrowse link
G Foxn4 forkhead box N4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:11,122,463...11,149,505
Ensembl chrNW_004624747:11,123,615...11,149,571 		JBrowse link
G Foxo3 forkhead box O3 enables ISO (MGI:4881905|PMID:19933931)
(PMID:19933931)		 BHF-UCL PMID:19933931 MGI:4881905 NCBI chrNW_004624780:13,621,733...13,740,399
Ensembl chrNW_004624780:13,622,948...13,740,374 		JBrowse link
G Foxp1 forkhead box P1 ISO RGD PMID:21606195 RGD:11561924 NCBI chrNW_004624773:5,543,529...6,076,522
Ensembl chrNW_004624773:5,543,536...5,883,131 		JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,787,352...13,820,781
Ensembl chrNW_004624745:13,788,288...13,821,599 		JBrowse link
G Gabpb1 GA binding protein transcription factor subunit beta 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:9,761,507...9,822,159 JBrowse link
G Gabpb2 GA binding protein transcription factor subunit beta 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624772:18,726,903...18,760,307 JBrowse link
G Gata1 GATA binding protein 1 enables ISO (PMID:10700180) BHF-UCL PMID:10700180 NCBI chrNW_004624893:595,948...602,980
Ensembl chrNW_004624893:595,967...602,979 		JBrowse link
G Gata3 GATA binding protein 3 enables ISO (PMID:19723756), (PMID:19735555), (PMID:19805038), (PMID:20189993), (PMID:20484083) UniProt PMID:19723756 PMID:19735555 PMID:19805038 PMID:20189993 PMID:20484083 NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392 		JBrowse link
G Gata4 GATA binding protein 4 enables ISO (PMID:15059951)
PMID:12606287
(PMID:9566909)		 AgBase
BHF-UCL
MGI		 PMID:9566909 PMID:12606287 PMID:15059951 RGD:8554170 NCBI chrNW_004624758:25,278,878...25,319,317
Ensembl chrNW_004624758:25,278,874...25,319,318 		JBrowse link
G Gata5 GATA binding protein 5 enables ISO (PMID:9566909)
(PMID:9119112)		 MGI PMID:9119112 PMID:9566909 NCBI chrNW_004624741:28,310,679...28,322,209
Ensembl chrNW_004624741:28,310,201...28,321,095 		JBrowse link
G Gata6 GATA binding protein 6 enables ISO (PMID:18177748), (PMID:19666519), (PMID:20206639), (PMID:9566909)
PMID:12606287		 UniProt
BHF-UCL		 PMID:9566909 PMID:12606287 PMID:18177748 PMID:19666519 PMID:20206639 RGD:8554170 NCBI chrNW_004624770:9,772,818...9,799,837
Ensembl chrNW_004624770:9,772,818...9,798,259 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624742:5,260,651...5,271,908
Ensembl chrNW_004624742:5,261,537...5,270,695 		JBrowse link
G Gli1 GLI family zinc finger 1 enables ISO (PMID:17035233) UniProt PMID:17035233 NCBI chrNW_004624802:10,483,279...10,494,539
Ensembl chrNW_004624802:10,483,219...10,498,609 		JBrowse link
G Gli2 GLI family zinc finger 2 enables ISO (PMID:19124651) MGI PMID:19124651 NCBI chrNW_004624732:24,159,407...24,381,495
Ensembl chrNW_004624732:24,159,312...24,328,452 		JBrowse link
G Glis2 GLIS family zinc finger 2 enables ISO (MGI:4936785|PMID:21127075)
(PMID:21127075)		 BHF-UCL PMID:21127075 MGI:4936785 NCBI chrNW_004624824:2,106,261...2,127,740
Ensembl chrNW_004624824:2,098,384...2,127,733 		JBrowse link
G Gmnn geminin DNA replication inhibitor NOT|enables ISO (MGI:3663964|PMID:16924111)
(PMID:16924111)		 UniProt PMID:16924111 MGI:3663964 NCBI chrNW_004624756:2,268,304...2,335,021
Ensembl chrNW_004624756:2,268,304...2,278,129 		JBrowse link
G Grhl1 grainyhead like transcription factor 1 enables ISO (MGI:3778256|PMID:18288204)
(PMID:18288204)		 UniProt PMID:18288204 MGI:3778256 NCBI chrNW_004624865:5,046,030...5,078,545
Ensembl chrNW_004624865:5,046,147...5,078,492 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 contributes_to ISO (PMID:11802795) BHF-UCL PMID:11802795 NCBI chrNW_004624733:34,731,671...34,733,759
Ensembl chrNW_004624733:34,731,671...34,733,759 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 contributes_to ISO (MGI:4362015|PMID:11812799) BHF-UCL PMID:11812799 MGI:4362015 NCBI chrNW_004624769:5,035,669...5,038,333
Ensembl chrNW_004624769:5,033,932...5,038,343 		JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chrNW_004624764:15,510,655...15,552,020
Ensembl chrNW_004624764:15,510,866...15,552,025 		JBrowse link
G Hdac4 histone deacetylase 4 contributes_to ISO (PMID:18850004) BHF-UCL PMID:18850004 NCBI chrNW_004624847:3,846,196...4,101,537
Ensembl chrNW_004624847:3,845,858...4,101,487 		JBrowse link
G Hdac5 histone deacetylase 5 contributes_to ISO (PMID:19351956) BHF-UCL PMID:19351956 NCBI chrNW_004624795:814,134...838,031
Ensembl chrNW_004624795:818,154...837,961 		JBrowse link
G Hhex hematopoietically expressed homeobox enables ISO (PMID:18755198) BHF-UCL PMID:18755198 NCBI chrNW_004624737:3,897,907...3,903,828
Ensembl chrNW_004624737:3,897,871...3,904,083 		JBrowse link
G Hinfp histone H4 transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,502,600...14,514,012
Ensembl chrNW_004624784:14,502,554...14,513,567 		JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO (PMID:17426251) UniProt PMID:17426251 NCBI chrNW_004624802:2,337,344...2,468,757
Ensembl chrNW_004624802:2,337,464...2,467,990 		JBrowse link
G Hmgb1 high mobility group box 1 enables ISO (PMID:19158276) UniProt PMID:19158276 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Hmgb2 high mobility group box 2 enables ISO (PMID:19965638) UniProt PMID:19965638 NCBI chrNW_004624769:4,834,998...4,837,111 JBrowse link
G Hnf1a HNF1 homeobox A enables ISO (PMID:12453420), (PMID:15961790) BHF-UCL PMID:12453420 PMID:15961790 NCBI chrNW_004624747:12,717,713...12,746,040
Ensembl chrNW_004624747:12,717,707...12,746,724 		JBrowse link
G Hnf1b HNF1 homeobox B enables ISO (PMID:20040500) MGI PMID:20040500 NCBI chrNW_004624871:4,662,104...4,713,125
Ensembl chrNW_004624871:4,661,669...4,712,960 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:10,039,344...10,065,167
Ensembl chrNW_004624790:10,038,999...10,100,649 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L enables ISO (PMID:11809897) UniProt PMID:11809897 NCBI chrNW_004624794:12,206,278...12,220,679
Ensembl chrNW_004624794:12,206,252...12,218,173 		JBrowse link
G Hoxa13 homeobox A13 enables ISO (PMID:18483557) MGI PMID:18483557 NCBI chrNW_004624739:3,405,860...3,410,426
Ensembl chrNW_004624739:3,406,436...3,410,851 		JBrowse link
G Hoxc13 homeobox C13 enables ISO (PMID:27506447) ARUK-UCL PMID:27506447 NCBI chrNW_004624904:1,993,854...2,001,623
Ensembl chrNW_004624904:1,993,854...2,000,500 		JBrowse link
G Hsf1 heat shock transcription factor 1 enables ISO (PMID:24504023) ARUK-UCL PMID:24504023 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 enables ISO (MGI:3822269|PMID:18804520), (PMID:7969165) UniProt PMID:7969165 PMID:18804520 MGI:3822269 NCBI chrNW_004624740:3,785,342...3,875,892
Ensembl chrNW_004624740:3,785,209...3,875,841 		JBrowse link
G Irf1 interferon regulatory factor 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624733:39,596,565...39,603,428
Ensembl chrNW_004624733:39,596,501...39,603,526 		JBrowse link
G Irf2 interferon regulatory factor 2 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624769:15,167,228...15,251,689
Ensembl chrNW_004624769:15,164,744...15,251,745 		JBrowse link
G Irf3 interferon regulatory factor 3 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Irf4 interferon regulatory factor 4 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624756:23,917,111...23,931,482
Ensembl chrNW_004624756:23,918,323...23,931,501 		JBrowse link
G Irf5 interferon regulatory factor 5 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624783:7,267,680...7,275,918
Ensembl chrNW_004624783:7,260,005...7,274,433 		JBrowse link
G Irf6 interferon regulatory factor 6 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624807:2,190,721...2,207,183
Ensembl chrNW_004624807:2,193,798...2,206,768 		JBrowse link
G Irf7 interferon regulatory factor 7 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
G Irf8 interferon regulatory factor 8 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624746:2,272,385...2,290,400
Ensembl chrNW_004624746:2,272,389...2,290,455 		JBrowse link
G Irf9 interferon regulatory factor 9 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624820:8,369,830...8,376,593
Ensembl chrNW_004624820:8,370,289...8,376,950 		JBrowse link
G Isl1 ISL LIM homeobox 1 enables ISO (MGI:7339313|PMID:18539116)
(PMID:18539116)		 UniProt PMID:18539116 MGI:7339313 NCBI chrNW_004624759:7,996,177...8,006,281
Ensembl chrNW_004624759:7,994,242...8,006,311 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:14645924), (PMID:21113145), (PMID:22083952), (PMID:24623306), (PMID:2833704), (PMID:9732876)
(PMID:19303854)		 BHF-UCL
MGI		 PMID:2833704 PMID:9732876 PMID:14645924 PMID:19303854 PMID:21113145 More... NCBI chrNW_004624862:1,537,886...1,540,633
Ensembl chrNW_004624862:1,538,455...1,539,426 		JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:1903194)
(PMID:22990073)
PMID:10523647		 UniProt
MGI
ParkinsonsUK-UCL		 PMID:1903194 PMID:10523647 PMID:22990073 RGD:10047214 NCBI chrNW_004624908:1,572,628...1,574,205
Ensembl chrNW_004624908:1,573,174...1,574,113 		JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 enables ISO (PMID:31146003) ARUK-UCL PMID:31146003 NCBI chrNW_004624800:5,633,060...5,663,700
Ensembl chrNW_004624800:5,632,726...5,663,771 		JBrowse link
G Kdm5a lysine demethylase 5A enables ISO (PMID:18270511) CAFA PMID:18270511 NCBI chrNW_004624735:8,473,778...8,631,964
Ensembl chrNW_004624735:8,530,016...8,631,954
Ensembl chrNW_004624735:8,530,016...8,631,954 		JBrowse link
G Klf1 KLF transcription factor 1 enables ISO (PMID:20676099) UniProt PMID:20676099 NCBI chrNW_004624901:467,937...471,917
Ensembl chrNW_004624901:468,662...471,500 		JBrowse link
G Klf11 KLF transcription factor 11 enables ISO (PMID:21171965) BHF-UCL PMID:21171965 NCBI chrNW_004624865:5,023,074...5,031,347 JBrowse link
G Klf15 KLF transcription factor 15 enables ISO (MGI:5312158|PMID:22367544)
(PMID:22367544)		 UniProt PMID:22367544 MGI:5312158 NCBI chrNW_004624773:243,599...256,786
Ensembl chrNW_004624773:243,569...257,531 		JBrowse link
G Klf17 KLF transcription factor 17 enables ISO (MGI:4410400|PMID:19801974)
(PMID:19801974)		 UniProt PMID:19801974 MGI:4410400 NCBI chrNW_004624892:3,374,594...3,383,928
Ensembl chrNW_004624892:3,374,538...3,383,943 		JBrowse link
G Klf4 KLF transcription factor 4 enables ISO PMID:19531492
(PMID:16954384), (PMID:24161396)
(MGI:4887334|PMID:16954384), (PMID:24161396)		 UniProt
MGI		 PMID:16954384 PMID:19531492 PMID:24161396 MGI:4887334 RGD:8553301 NCBI chrNW_004624758:4,047,217...4,052,257
Ensembl chrNW_004624758:4,047,219...4,051,983 		JBrowse link
G Kmt2d lysine methyltransferase 2D enables ISO (PMID:16603732) UniProt PMID:16603732 NCBI chrNW_004624816:3,129,127...3,169,143
Ensembl chrNW_004624816:3,133,659...3,166,346 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables ISO (PMID:12551949), (PMID:19056892), (PMID:7537238) MGI PMID:7537238 PMID:12551949 PMID:19056892 NCBI chrNW_004624830:1,320,034...1,422,774
Ensembl chrNW_004624830:1,321,387...1,424,389 		JBrowse link
G Lhx3 LIM homeobox 3 enables ISO (MGI:7339313|PMID:18539116)
(PMID:18539116)		 UniProt PMID:18539116 MGI:7339313 NCBI chrNW_004624760:1,428,496...1,435,414
Ensembl chrNW_004624760:1,429,384...1,435,414 		JBrowse link
G LOC101705132 RING finger protein 10-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624825:8,676,135...8,678,968 JBrowse link
G LOC101706296 core histone macro-H2A.1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:11,650,067...11,714,399
Ensembl chrNW_004624733:11,650,537...11,715,999 		JBrowse link
G LOC101712013 core histone macro-H2A.2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:4,227,897...4,276,595
Ensembl chrNW_004624754:4,227,644...4,279,077 		JBrowse link
G LOC101719341 X-ray repair cross-complementing protein 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:8,901,334...9,017,277
Ensembl chrNW_004624823:8,901,334...8,999,445 		JBrowse link
G Mafk MAF bZIP transcription factor K enables ISO (MGI:894855|PMID:9240432)
(PMID:9240432)		 UniProt PMID:9240432 MGI:894855 NCBI chrNW_004624740:26,995,889...27,007,258
Ensembl chrNW_004624740:27,002,022...27,006,324 		JBrowse link
G Mef2c myocyte enhancer factor 2C enables ISO (MGI:4940010|PMID:8035824)
(PMID:8035824)		 BHF-UCL PMID:8035824 MGI:4940010 NCBI chrNW_004624743:8,072,871...8,235,174
Ensembl chrNW_004624743:8,072,673...8,235,252 		JBrowse link
G Men1 menin 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:21,579,084...21,585,380
Ensembl chrNW_004624767:21,579,103...21,585,373 		JBrowse link
G Mrtfa myocardin related transcription factor A enables ISO (PMID:17991879) MGI PMID:17991879 NCBI chrNW_004624752:7,836,545...8,050,176
Ensembl chrNW_004624752:7,878,876...8,050,274 		JBrowse link
G Msx1 msh homeobox 1 contributes_to
enables		 ISO (MGI:6874923|PMID:23371388)
(PMID:23371388)
(MGI:3620509|PMID:16600910)		 UniProt PMID:16600910 PMID:23371388 MGI:3620509 MGI:6874923 NCBI chrNW_004624755:21,857,360...21,861,235
Ensembl chrNW_004624755:21,857,461...21,861,337 		JBrowse link
G Msx2 msh homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:15,288,417...15,294,481
Ensembl chrNW_004624733:15,288,326...15,294,568 		JBrowse link
G Mterf3 mitochondrial transcription termination factor 3 enables ISO (PMID:17662942) UniProt PMID:17662942 NCBI chrNW_004624763:3,558,707...3,587,546
Ensembl chrNW_004624763:3,556,483...3,587,318 		JBrowse link
G Nanog Nanog homeobox enables ISO (PMID:25825768)
(PMID:20123909)		 UniProt
MGI		 PMID:20123909 PMID:25825768 NCBI chrNW_004624860:5,026,203...5,037,219 JBrowse link
G Ncor1 nuclear receptor corepressor 1 enables ISO (MGI:3604169|PMID:16127449)
(PMID:16127449)		 BHF-UCL PMID:16127449 MGI:3604169 NCBI chrNW_004624877:4,203,125...4,379,891
Ensembl chrNW_004624877:4,233,282...4,377,211 		JBrowse link
G Nfatc2 nuclear factor of activated T cells 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:4,366,440...4,484,279
Ensembl chrNW_004624790:4,366,406...4,484,432 		JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 enables ISO PMID:19538478
(MGI:5285124|PMID:21514407), (MGI:6871969|PMID:24970700), (MGI:7565895|PMID:19538478)		 UniProt PMID:19538478 PMID:21514407 PMID:24970700 MGI:5285124 MGI:6871969 MGI:7565895 RGD:401901216 NCBI chrNW_004624746:18,083,051...18,210,399
Ensembl chrNW_004624746:18,085,518...18,210,401 		JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:8,136,231...8,145,395
Ensembl chrNW_004624820:8,136,156...8,146,312 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 enables ISO PMID:16314513
(PMID:9240432)
(PMID:17015834), (PMID:20452972)
(MGI:894855|PMID:9240432)		 UniProt PMID:9240432 PMID:16314513 PMID:17015834 PMID:20452972 MGI:894855 RGD:8655528 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 enables ISO (PMID:16938301), (PMID:17426251), (PMID:18718911) RGD
BHF-UCL		 PMID:14576180 PMID:16938301 PMID:17426251 PMID:18718911 RGD:1358515 NCBI chrNW_004624830:5,334,273...5,430,887
Ensembl chrNW_004624830:5,333,616...5,408,723 		JBrowse link
G Nfya nuclear transcription factor Y subunit alpha contributes_to ISO (PMID:11256944)
(PMID:15516209)		 ParkinsonsUK-UCL
MGI		 PMID:11256944 PMID:15516209 NCBI chrNW_004624754:17,660,134...17,682,604
Ensembl chrNW_004624754:17,656,036...17,682,624 		JBrowse link
G Nfyb nuclear transcription factor Y subunit beta contributes_to ISO (PMID:11256944)
(PMID:15516209)		 ParkinsonsUK-UCL
MGI		 PMID:11256944 PMID:15516209 NCBI chrNW_004624750:4,600,423...4,616,241
Ensembl chrNW_004624750:4,600,345...4,614,817 		JBrowse link
G Nfyc nuclear transcription factor Y subunit gamma contributes_to
enables		 ISO
IEA		 (PMID:11256944)
(PMID:15516209)		 ParkinsonsUK-UCL
MGI
Ensembl		 PMID:11256944 PMID:15516209 GO_REF:0000107 NCBI chrNW_004624892:145,369...214,107
Ensembl chrNW_004624892:159,791...214,951 		JBrowse link
G Nkx2-1 NK2 homeobox 1 enables ISO (PMID:14960358), (PMID:1735431), (PMID:7559607)
(PMID:18632661)
(PMID:19176457)		 UniProt
MGI		 PMID:1735431 PMID:7559607 PMID:14960358 PMID:18632661 PMID:19176457 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517 		JBrowse link
G Nkx2-5 NK2 homeobox 5 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:16,881,189...16,884,245
Ensembl chrNW_004624733:16,881,191...16,884,210 		JBrowse link
G Nkx3-1 NK3 homeobox 1 enables ISO (PMID:19263243), (PMID:20855495) UniProt PMID:19263243 PMID:20855495 NCBI chrNW_004624758:18,874,399...18,876,982
Ensembl chrNW_004624758:18,875,475...18,876,971 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 enables ISO
IEA		 RGD
Ensembl		 PMID:8015547 GO_REF:0000107 RGD:10448983 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 contributes_to
enables		 ISO (MGI:4399016|PMID:17107947)
(PMID:19229075)
(PMID:18511497)		 BHF-UCL PMID:17107947 PMID:18511497 PMID:19229075 MGI:4399016 NCBI chrNW_004624767:1,459,601...1,473,224
Ensembl chrNW_004624767:1,459,601...1,467,795 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 enables ISO (PMID:26888176) UniProt PMID:26888176 NCBI chrNW_004624750:7,222,306...7,303,809
Ensembl chrNW_004624750:7,219,251...7,303,834 		JBrowse link
G Nr5a2 nuclear receptor subfamily 5 group A member 2 enables ISO (PMID:15205472) BHF-UCL PMID:15205472 NCBI chrNW_004624798:356,953...494,877 JBrowse link
G Ovol2 ovo like zinc finger 2 enables ISO (PMID:19700410) BHF-UCL PMID:19700410 NCBI chrNW_004624741:18,994,689...19,012,381
Ensembl chrNW_004624741:18,995,246...19,012,910 		JBrowse link
G Pax2 paired box 2 enables ISO (PMID:16368682), (PMID:16735463), (PMID:19048125), (PMID:9178767)
(PMID:17047028)
(MGI:3697544|PMID:17047028)		 UniProt PMID:9178767 PMID:16368682 PMID:16735463 PMID:17047028 PMID:19048125 MGI:3697544 NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930 		JBrowse link
G Pax6 paired box 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:20,536,581...20,554,589
Ensembl chrNW_004624766:20,536,233...20,554,759 		JBrowse link
G Pax8 paired box 8 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624749:13,291,880...13,358,066
Ensembl chrNW_004624749:13,300,606...13,357,903 		JBrowse link
G Pbx1 PBX homeobox 1 enables ISO (PMID:9191052) UniProt PMID:9191052 NCBI chrNW_004624826:2,944,272...3,250,957
Ensembl chrNW_004624826:2,945,004...3,215,110 		JBrowse link
G Per1 period circadian regulator 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859 		JBrowse link
G Per2 period circadian regulator 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624847:3,359,174...3,399,584
Ensembl chrNW_004624847:3,361,170...3,390,405 		JBrowse link
G Pias1 protein inhibitor of activated STAT 1 enables ISO (MGI:3620509|PMID:16600910)
(PMID:16600910)		 UniProt PMID:16600910 MGI:3620509 NCBI chrNW_004624781:4,893,308...5,046,928
Ensembl chrNW_004624781:4,893,308...5,046,582 		JBrowse link
G Pitx2 paired like homeodomain 2 enables ISO (PMID:12612071), (PMID:9685346) BHF-UCL PMID:9685346 PMID:12612071 NCBI chrNW_004624838:4,872,279...4,889,780
Ensembl chrNW_004624838:4,871,511...4,886,384 		JBrowse link
G Pou2f1 POU class 2 homeobox 1 ISO RGD PMID:8632766 PMID:12818430 RGD:731231 RGD:9727455 NCBI chrNW_004624826:5,334,365...5,501,421
Ensembl chrNW_004624826:5,334,366...5,493,821 		JBrowse link
G Pou2f2 POU class 2 homeobox 2 enables ISO (MGI:5450752|PMID:23045607)
(PMID:23045607)		 UniProt PMID:23045607 MGI:5450752 NCBI chrNW_004624907:564,553...638,020
Ensembl chrNW_004624907:604,637...635,296 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISO (PMID:19409607), (PMID:19736317)
(PMID:17541407), (PMID:25901318)
(MGI:4399014|PMID:17541407), (PMID:25901318)		 BHF-UCL
MGI
UniProt		 PMID:17541407 PMID:19409607 PMID:19736317 PMID:25901318 MGI:4399014 NCBI chrNW_004624754:24,758,055...24,764,723 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma enables ISO (MGI:3604169|PMID:16127449), (MGI:4881351|PMID:21035761)
(PMID:16127449), (PMID:21035761)
(PMID:18293083)
PMID:19383491		 UniProt
BHF-UCL		 PMID:16127449 PMID:18293083 PMID:19383491 PMID:21035761 MGI:3604169 MGI:4881351 RGD:8553457 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Prdm1 PR/SET domain 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624780:16,205,056...16,227,382
Ensembl chrNW_004624780:16,204,838...16,227,390 		JBrowse link
G Prdm16 PR/SET domain 16 enables ISO (PMID:12816872) ARUK-UCL PMID:12816872 NCBI chrNW_004624818:6,978,436...7,258,366
Ensembl chrNW_004624818:6,978,436...7,258,357 		JBrowse link
G Prdm5 PR/SET domain 5 enables ISO (PMID:17636019) UniProt PMID:17636019 NCBI chrNW_004624777:675,215...893,125
Ensembl chrNW_004624777:676,965...893,047 		JBrowse link
G Prox1 prospero homeobox 1 enables ISO (PMID:19210544) BHF-UCL PMID:19210544 NCBI chrNW_004624771:19,188,543...19,238,621
Ensembl chrNW_004624771:19,196,366...19,233,338 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein enables ISO (PMID:25901318) MGI PMID:25901318 NCBI chrNW_004624758:4,168,341...4,211,893
Ensembl chrNW_004624758:4,167,215...4,211,487 		JBrowse link
G Rara retinoic acid receptor alpha enables ISO (MGI:4411947|PMID:19752193)
(PMID:19752193)
(PMID:25209250)		 UniProt
MGI		 PMID:19752193 PMID:25209250 MGI:4411947 NCBI chrNW_004624795:2,935,432...2,975,226
Ensembl chrNW_004624795:2,934,731...2,967,232 		JBrowse link
G Rbbp5 RB binding protein 5, histone lysine methyltransferase complex subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624807:6,011,861...6,046,927
Ensembl chrNW_004624807:6,011,289...6,046,923 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272 		JBrowse link
G Rest RE1 silencing transcription factor enables ISO (PMID:17555596)
(PMID:15907476)
(MGI:3580760|PMID:15907476)		 UniProt PMID:15907476 PMID:17555596 MGI:3580760 NCBI chrNW_004624761:12,464,243...12,495,294 JBrowse link
G Rfx3 regulatory factor X3 enables ISO (PMID:20148032)
(PMID:19671664)
(MGI:4361058|PMID:19671664)		 UniProt PMID:19671664 PMID:20148032 MGI:4361058 NCBI chrNW_004624736:8,001,078...8,301,856
Ensembl chrNW_004624736:8,003,234...8,161,150 		JBrowse link
G Rfx6 regulatory factor X6 enables ISO (PMID:20148032) UniProt PMID:20148032 NCBI chrNW_004624798:12,735,428...12,795,502
Ensembl chrNW_004624798:12,736,083...12,795,502 		JBrowse link
G Rnf10 ring finger protein 10 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:13,094,084...13,134,360 JBrowse link
G Runx2 RUNX family transcription factor 2 enables ISO (MGI:3822269|PMID:18804520), (PMID:12551949)
(PMID:12551949), (PMID:18804520)		 MGI
UniProt		 PMID:12551949 PMID:18804520 MGI:3822269 NCBI chrNW_004624754:14,601,574...14,868,469
Ensembl chrNW_004624754:14,679,974...14,867,729 		JBrowse link
G Rxra retinoid X receptor alpha contributes_to
enables		 ISO (MGI:4399016|PMID:17107947)
(PMID:17107947)
(PMID:18511497)		 BHF-UCL PMID:17107947 PMID:18511497 MGI:4399016 NCBI chrNW_004624760:2,379,809...2,455,749
Ensembl chrNW_004624760:2,380,708...2,456,928 		JBrowse link
G Rxrb retinoid X receptor beta enables ISO (MGI:4820711|PMID:18922886)
(PMID:18922886)		 UniProt PMID:18922886 MGI:4820711 NCBI chrNW_004624754:23,607,046...23,613,399
Ensembl chrNW_004624754:23,606,955...23,613,508 		JBrowse link
G Sfpq splicing factor proline and glutamine rich enables ISO (MGI:5014424|PMID:21680841)
(PMID:21680841)		 UniProt PMID:21680841 MGI:5014424 NCBI chrNW_004624764:18,223,845...18,239,748
Ensembl chrNW_004624764:18,228,365...18,240,340 		JBrowse link
G Six1 SIX homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:40,453,445...40,457,551
Ensembl chrNW_004624734:40,453,420...40,459,671 		JBrowse link
G Smad3 SMAD family member 3 enables ISO (PMID:9732876) BHF-UCL PMID:9732876 NCBI chrNW_004624781:5,795,652...5,890,047
Ensembl chrNW_004624781:5,795,652...5,890,371 		JBrowse link
G Smad4 SMAD family member 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:14,570,025...14,629,950
Ensembl chrNW_004624778:14,570,348...14,630,325 		JBrowse link
G Smad6 SMAD family member 6 enables ISO (PMID:16491121) UniProt PMID:16491121 NCBI chrNW_004624781:6,043,183...6,108,959
Ensembl chrNW_004624781:6,042,904...6,107,860 		JBrowse link
G Smarca2 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2 enables ISO (PMID:17984088) UniProt PMID:17984088 NCBI chrNW_004624736:6,681,491...6,863,403
Ensembl chrNW_004624736:6,695,658...6,865,809 		JBrowse link
G Sox10 SRY-box transcription factor 10 enables IEA UniProt GO_REF:0000117 NCBI chrNW_004624752:9,965,015...9,976,244
Ensembl chrNW_004624752:9,965,756...9,973,777 		JBrowse link
G Sox11 SRY-box transcription factor 11 enables ISO PMID:12637543
(PMID:18505825)
(MGI:3803393|PMID:18505825)		 GO_Central
UniProt		 PMID:12637543 PMID:18505825 MGI:3803393 RGD:8554307 NCBI chrNW_004624846:4,043,010...4,046,660
Ensembl chrNW_004624846:4,044,893...4,046,248 		JBrowse link
G Sox12 SRY-box transcription factor 12 enables ISO (MGI:3803393|PMID:18505825) UniProt PMID:18505825 MGI:3803393 NCBI chrNW_004624741:1,428,233...1,432,372
Ensembl chrNW_004624741:1,428,241...1,431,025 		JBrowse link
G Sox13 SRY-box transcription factor 13 enables ISO (PMID:26525805) UniProt PMID:26525805 NCBI chrNW_004624807:6,848,218...6,887,666
Ensembl chrNW_004624807:6,848,218...6,888,467 		JBrowse link
G Sox17 SRY-box transcription factor 17 enables ISO (MGI:4887291|PMID:20802155), (MGI:4887547|PMID:19328208), (PMID:19515696), (PMID:20123909), (PMID:25209250), (PMID:8636240)
(PMID:19328208), (PMID:19515696), (PMID:20123909), (PMID:20802155), (PMID:25209250), (PMID:8636240)		 MGI
BHF-UCL		 PMID:8636240 PMID:19328208 PMID:19515696 PMID:20123909 PMID:20802155 More... MGI:4887291 MGI:4887547 NCBI chrNW_004624735:1,276,382...1,278,584
Ensembl chrNW_004624735:1,276,302...1,279,181 		JBrowse link
G Sox18 SRY-box transcription factor 18 enables ISO (PMID:18065521)
(PMID:14634005), (PMID:18931657)		 UniProt
MGI		 PMID:14634005 PMID:18065521 PMID:18931657 NCBI chrNW_004624741:29,679,274...29,681,069
Ensembl chrNW_004624741:29,679,091...29,681,049 		JBrowse link
G Sox2 SRY-box transcription factor 2 enables ISO PMID:12637543
(PMID:19328208), (PMID:20123909), (PMID:25901318)
(MGI:4887547|PMID:19328208), (PMID:20123909), (PMID:25901318)
(PMID:18407919)		 GO_Central
MGI
UniProt		 PMID:12637543 PMID:18407919 PMID:19328208 PMID:20123909 PMID:25901318 MGI:4887547 RGD:8554307 NCBI chrNW_004624730:59,570,879...59,573,001
Ensembl chrNW_004624730:59,570,915...59,571,871 		JBrowse link
G Sox4 SRY-box transcription factor 4 enables ISO (MGI:3803393|PMID:18505825) UniProt PMID:18505825 MGI:3803393 NCBI chrNW_004624756:5,128,848...5,156,174 JBrowse link
G Sox5 SRY-box transcription factor 5 enables ISO (PMID:26525805)
(PMID:17084361)		 UniProt
MGI		 PMID:17084361 PMID:26525805 NCBI chrNW_004624752:14,986,146...15,382,687
Ensembl chrNW_004624752:14,985,942...15,378,465 		JBrowse link
G Sox6 SRY-box transcription factor 6 enables ISO (PMID:26525805)
(PMID:17084361)		 UniProt
MGI		 PMID:17084361 PMID:26525805 NCBI chrNW_004624766:7,683,492...8,301,823
Ensembl chrNW_004624766:7,689,775...8,084,764 		JBrowse link
G Sox7 SRY-box transcription factor 7 enables ISO (MGI:4887547|PMID:19328208), (PMID:19515696)
(PMID:19328208), (PMID:19515696)		 MGI
BHF-UCL		 PMID:19328208 PMID:19515696 MGI:4887547 NCBI chrNW_004624758:24,556,436...24,562,204
Ensembl chrNW_004624758:24,556,010...24,562,213 		JBrowse link
G Sox9 SRY-box transcription factor 9 enables IEA UniProt GO_REF:0000117 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Sp1 Sp1 transcription factor enables ISO (PMID:18293083), (PMID:18850004) BHF-UCL PMID:18293083 PMID:18850004 NCBI chrNW_004624904:1,475,664...1,507,588 JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO (PMID:27506447)
(PMID:31146003)		 ARUK-UCL PMID:27506447 PMID:31146003 NCBI chrNW_004624767:1,376,649...1,404,382
Ensembl chrNW_004624767:1,394,704...1,404,406 		JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 enables ISO (PMID:11739104) MGI PMID:11739104 NCBI chrNW_004624752:6,815,075...6,871,674
Ensembl chrNW_004624752:6,816,468...6,871,567 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 enables ISO (PMID:17324931)
(MGI:7565895|PMID:19538478)		 BHF-UCL
UniProt		 PMID:17324931 PMID:19538478 MGI:7565895 NCBI chrNW_004624795:1,648,235...1,680,788
Ensembl chrNW_004624795:1,648,080...1,681,200 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase enables ISO (MGI:5569417|PMID:24413057)
(PMID:24413057)		 UniProt PMID:24413057 MGI:5569417 NCBI chrNW_004624893:499,222...512,341
Ensembl chrNW_004624893:498,973...512,443 		JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase enables ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chrNW_004624805:594,986...619,115
Ensembl chrNW_004624805:597,406...618,969 		JBrowse link
G Taf2 TATA-box binding protein associated factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624763:17,801,835...17,907,538
Ensembl chrNW_004624763:17,806,280...17,907,547 		JBrowse link
G Taf7 TATA-box binding protein associated factor 7 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624774:548,072...550,410
Ensembl chrNW_004624774:548,072...550,404 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 enables ISO (PMID:19251649) BHF-UCL PMID:19251649 NCBI chrNW_004624905:240,760...244,656
Ensembl chrNW_004624905:240,760...244,656 		JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor enables ISO (MGI:3849640|PMID:19497860), (PMID:9111058)
(PMID:19497860), (PMID:9111058)		 MGI PMID:9111058 PMID:19497860 MGI:3849640 NCBI chrNW_004624859:5,586,489...5,601,225
Ensembl chrNW_004624859:5,586,977...5,601,460 		JBrowse link
G Tbl1x transducin beta like 1 X-linked enables ISO (MGI:3604169|PMID:16127449)
(PMID:16127449)
(PMID:18193033)		 BHF-UCL
UniProt		 PMID:16127449 PMID:18193033 MGI:3604169 NCBI chrNW_004624834:7,086,348...7,281,974 JBrowse link
G Tbl1xr1 TBL1X/Y related 1 enables ISO (PMID:18193033)
(PMID:16127449)
(MGI:3604169|PMID:16127449)		 UniProt
BHF-UCL		 PMID:16127449 PMID:18193033 MGI:3604169 NCBI chrNW_004624730:54,835,624...55,013,474
Ensembl chrNW_004624730:54,835,624...54,884,835 		JBrowse link
G Tbp TATA-box binding protein enables ISO (PMID:16540471), (PMID:7933101), (PMID:9027316) MGI PMID:7933101 PMID:9027316 PMID:16540471 NCBI chrNW_004624850:6,359,382...6,375,391
Ensembl chrNW_004624850:6,359,418...6,375,391 		JBrowse link
G Tbx21 T-box transcription factor 21 enables ISO (PMID:19805038) UniProt PMID:19805038 NCBI chrNW_004624795:4,442,188...4,453,544
Ensembl chrNW_004624795:4,442,188...4,453,143 		JBrowse link
G Tcf12 transcription factor 12 contributes_to ISO (PMID:11802795) BHF-UCL PMID:11802795 NCBI chrNW_004624781:14,433,557...14,847,634 JBrowse link
G Tcf20 transcription factor 20 enables ISO (PMID:7760812) MGI PMID:7760812 NCBI chrNW_004624752:6,446,414...6,537,238 JBrowse link
G Tcf3 transcription factor 3 contributes_to ISO (PMID:11802795) BHF-UCL PMID:11802795 NCBI chrNW_004624828:7,090,562...7,119,970
Ensembl chrNW_004624828:7,090,605...7,121,428 		JBrowse link
G Tcf7 transcription factor 7 enables ISO (PMID:18579517), (PMID:20128911) UniProt PMID:18579517 PMID:20128911 NCBI chrNW_004624733:38,076,800...38,104,265
Ensembl chrNW_004624733:38,076,410...38,104,173 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 enables ISO (PMID:20128911)
(PMID:20044351)		 UniProt
MGI		 PMID:20044351 PMID:20128911 NCBI chrNW_004624737:33,341,574...33,526,814
Ensembl chrNW_004624737:33,341,029...33,526,928 		JBrowse link
G Tfam transcription factor A, mitochondrial enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624791:5,183,276...5,198,986
Ensembl chrNW_004624791:5,179,195...5,198,611 		JBrowse link
G Tfap2a transcription factor AP-2 alpha enables ISO (PMID:12586840), (PMID:18718911), (PMID:31146003) ARUK-UCL PMID:12586840 PMID:18718911 PMID:31146003 NCBI chrNW_004624756:15,413,950...15,436,037
Ensembl chrNW_004624756:15,418,260...15,436,379 		JBrowse link
G Tfap4 transcription factor AP-4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:2,044,322...2,105,571
Ensembl chrNW_004624824:2,044,235...2,058,662 		JBrowse link
G Tfe3 transcription factor binding to IGHM enhancer 3 enables ISO (MGI:3662947|PMID:16936731)
(PMID:16936731)		 UniProt PMID:16936731 MGI:3662947 NCBI chrNW_004624893:803,717...817,700
Ensembl chrNW_004624893:803,717...817,705 		JBrowse link
G Tfeb transcription factor EB enables ISO (PMID:19556463)
(PMID:16936731)
(MGI:3662947|PMID:16936731)		 UniProt PMID:16936731 PMID:19556463 MGI:3662947 NCBI chrNW_004624754:17,321,179...17,358,402
Ensembl chrNW_004624754:17,321,162...17,358,524 		JBrowse link
G Thra thyroid hormone receptor alpha enables ISO (PMID:18052923)
(MGI:5700300|PMID:19001373)		 BHF-UCL
ParkinsonsUK-UCL		 PMID:18052923 PMID:19001373 MGI:5700300 NCBI chrNW_004624795:3,109,663...3,132,494
Ensembl chrNW_004624795:3,108,854...3,132,464 		JBrowse link
G Tnf tumor necrosis factor enables ISO (PMID:17350185) UniProt PMID:17350185 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
G Tp53 tumor protein p53 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218 		JBrowse link
G Tp63 tumor protein p63 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624730:67,283,444...67,489,808
Ensembl chrNW_004624730:67,286,160...67,489,670 		JBrowse link
G Tp73 tumor protein p73 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004624818:6,775,588...6,817,187
Ensembl chrNW_004624818:6,775,599...6,809,289 		JBrowse link
G Vsx1 visual system homeobox 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624939:375,749...381,823 JBrowse link
G Wt1 WT1 transcription factor enables ISO (PMID:1332065), (PMID:16467207), (PMID:7585606), (PMID:7588596), (PMID:9815658) UniProt PMID:1332065 PMID:7585606 PMID:7588596 PMID:9815658 PMID:16467207 NCBI chrNW_004624766:20,899,546...20,937,084
Ensembl chrNW_004624766:20,900,676...20,937,202 		JBrowse link
G Xbp1 X-box binding protein 1 enables ISO (MGI:3798313|PMID:18556558)
(PMID:18556558)
(PMID:23184933), (PMID:25190803)		 UniProt PMID:18556558 PMID:23184933 PMID:25190803 MGI:3798313 NCBI chrNW_004624747:5,123,085...5,128,465 JBrowse link
G Xrcc6 X-ray repair cross complementing 6 enables ISO (PMID:18809223) BHF-UCL PMID:18809223 NCBI chrNW_004624752:6,987,456...7,010,834
Ensembl chrNW_004624752:6,979,271...7,010,787 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator enables ISO (PMID:18280240) UniProt PMID:18280240 NCBI chrNW_004624878:621,214...776,363 JBrowse link
G Yy1 YY1 transcription factor enables ISO (PMID:9857059) MGI PMID:9857059 NCBI chrNW_004624734:3,846,753...3,875,294
Ensembl chrNW_004624734:3,846,765...3,875,294 		JBrowse link
G Zbed2 zinc finger BED-type containing 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:37,017,553...37,021,546
Ensembl chrNW_004624731:37,018,830...37,019,483 		JBrowse link
G Zbed4 zinc finger BED-type containing 4 enables ISO (MGI:6234760|PMID:22693546)
(PMID:22693546)		 UniProt PMID:22693546 MGI:6234760 NCBI chrNW_004624752:763,148...785,330
Ensembl chrNW_004624752:764,368...767,868 		JBrowse link
G Zbed6 zinc finger BED-type containing 6 enables ISO (MGI:4421252|PMID:20016685), (MGI:6120647|PMID:29440408) ARUK-UCL PMID:20016685 PMID:29440408 MGI:4421252 MGI:6120647 NCBI chrNW_004624807:7,158,405...7,165,500 JBrowse link
G Zbtb14 zinc finger and BTB domain containing 14 enables ISO (PMID:17714511) UniProt PMID:17714511 NCBI chrNW_004624770:15,016,689...15,021,000
Ensembl chrNW_004624770:15,012,887...15,019,805 		JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:33,307,686...34,202,576
Ensembl chrNW_004624731:34,108,927...34,172,231 		JBrowse link
G Zbtb46 zinc finger and BTB domain containing 46 enables ISO (MGI:5461437|PMID:22851594)
(PMID:22851594)		 ARUK-UCL PMID:22851594 MGI:5461437 NCBI chrNW_004624741:29,397,900...29,443,605
Ensembl chrNW_004624741:29,398,784...29,463,641 		JBrowse link
G Zbtb48 zinc finger and BTB domain containing 48 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624818:4,943,468...4,951,223
Ensembl chrNW_004624818:4,942,849...4,951,024 		JBrowse link
G Zbtb8a zinc finger and BTB domain containing 8A enables ISO (PMID:23329847) ARUK-UCL PMID:23329847 NCBI chrNW_004624764:15,731,678...15,771,599 JBrowse link
G Zfhx3 zinc finger homeobox 3 enables ISO (PMID:11312261) UniProt PMID:11312261 NCBI chrNW_004624746:15,094,890...15,330,653
Ensembl chrNW_004624746:15,098,960...15,254,127 		JBrowse link
G Znf148 zinc finger protein 148 ISO RGD PMID:8943318 RGD:61784 NCBI chrNW_004624731:1,271,478...1,410,047
Ensembl chrNW_004624731:1,278,242...1,354,063 		JBrowse link
G Znf174 zinc finger protein 174 enables ISO (PMID:7673192) UniProt PMID:7673192 NCBI chrNW_004624824:1,197,475...1,210,405
Ensembl chrNW_004624824:1,197,233...1,206,214 		JBrowse link
G Znf217 zinc finger protein 217 enables ISO (PMID:18625718) UniProt PMID:18625718 NCBI chrNW_004624790:2,634,571...2,668,191
Ensembl chrNW_004624790:2,655,806...2,668,499 		JBrowse link
G Znf263 zinc finger protein 263 enables ISO (PMID:32051553), (PMID:32277030) UniProt PMID:32051553 PMID:32277030 NCBI chrNW_004624824:1,067,811...1,074,910
Ensembl chrNW_004624824:1,067,773...1,074,907 		JBrowse link
G Znf281 zinc finger protein 281 enables ISO (PMID:10448078) UniProt PMID:10448078 NCBI chrNW_004624798:154,949...158,292
Ensembl chrNW_004624798:154,980...158,287 		JBrowse link
G Znf335 zinc finger protein 335 enables ISO (MGI:5468205|PMID:23178126) UniProt PMID:23178126 MGI:5468205 NCBI chrNW_004624790:8,624,316...8,646,712
Ensembl chrNW_004624790:8,625,150...8,647,441 		JBrowse link
G Znf513 zinc finger protein 513 enables ISO (PMID:20797688)
(MGI:4887292|PMID:20797688)		 UniProt PMID:20797688 MGI:4887292 NCBI chrNW_004624738:9,450,789...9,454,476
Ensembl chrNW_004624738:9,450,789...9,454,479 		JBrowse link
G Znf579 zinc finger protein 579 enables ISO (PMID:32096311) ARUK-UCL PMID:32096311 NCBI chrNW_004624832:1,819,302...1,823,105
Ensembl chrNW_004624832:1,821,169...1,822,761 		JBrowse link
G Znf639 zinc finger protein 639 enables ISO (PMID:20484494) UniProt PMID:20484494 NCBI chrNW_004624730:57,074,036...57,087,489
Ensembl chrNW_004624730:57,078,794...57,084,254 		JBrowse link
G Znf746 zinc finger protein 746 enables ISO (PMID:21376232) UniProt PMID:21376232 NCBI chrNW_004624800:6,389,548...6,413,380
Ensembl chrNW_004624800:6,389,282...6,413,380 		JBrowse link
cAMP response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 enables ISO
IEA		 RGD
TreeGrafter		 PMID:12196528 GO_REF:0000118 RGD:727574 NCBI chrNW_004624787:12,241,838...12,338,089 JBrowse link
G Atf7 activating transcription factor 7 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624904:1,604,083...1,705,739
Ensembl chrNW_004624904:1,613,487...1,706,549 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:8,374,160...8,436,969 JBrowse link
G Creb3l1 cAMP responsive element binding protein 3 like 1 enables ISO (MGI:4438316|PMID:19767743) UniProt PMID:19767743 MGI:4438316 NCBI chrNW_004624767:2,215,850...2,247,470
Ensembl chrNW_004624767:2,215,558...2,247,509 		JBrowse link
G Creb3l2 cAMP responsive element binding protein 3 like 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624765:18,152,099...18,275,614
Ensembl chrNW_004624765:18,157,132...18,276,029 		JBrowse link
G Creb5 cAMP responsive element binding protein 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:1,781,424...2,201,931
Ensembl chrNW_004624739:1,782,598...2,198,283 		JBrowse link
G E4f1 E4F transcription factor 1 enables ISO (PMID:14645522) UniProt PMID:14645522 NCBI chrNW_004624824:38,062...50,183
Ensembl chrNW_004624824:38,146...49,019 		JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO (PMID:14645522) UniProt PMID:14645522 NCBI chrNW_004624802:2,337,344...2,468,757
Ensembl chrNW_004624802:2,337,464...2,467,990 		JBrowse link
G Jdp2 Jun dimerization protein 2 enables ISO (PMID:11231009) MGI PMID:11231009 NCBI chrNW_004624734:26,228,147...26,276,485
Ensembl chrNW_004624734:26,224,961...26,276,612 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:19861239) BHF-UCL PMID:19861239 NCBI chrNW_004624862:1,537,886...1,540,633
Ensembl chrNW_004624862:1,538,455...1,539,426 		JBrowse link
G Nr4a3 nuclear receptor subfamily 4 group A member 3 enables ISO (MGI:5543879|PMID:23897430)
(PMID:23897430)		 UniProt PMID:23897430 MGI:5543879 NCBI chrNW_004624825:1,098,915...1,141,373
Ensembl chrNW_004624825:1,097,432...1,141,446 		JBrowse link
G Tcf12 transcription factor 12 ISO RGD PMID:7683670 RGD:729997 NCBI chrNW_004624781:14,433,557...14,847,634 JBrowse link
cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor enables ISO (PMID:23275542) MGI PMID:23275542 NCBI chrNW_004624739:12,939,183...12,987,574
Ensembl chrNW_004624739:12,942,165...12,987,973 		JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables ISO (PMID:23275542) MGI PMID:23275542 NCBI chrNW_004624772:18,949,221...19,016,672
Ensembl chrNW_004624772:18,949,108...19,015,504 		JBrowse link
G Atf2 activating transcription factor 2 enables ISO (PMID:2196176) UniProt PMID:2196176 NCBI chrNW_004624787:12,241,838...12,338,089 JBrowse link
G Ctcf CCCTC-binding factor enables ISO (PMID:28636939) MGI PMID:28636939 NCBI chrNW_004624746:18,705,017...18,760,345
Ensembl chrNW_004624746:18,706,663...18,760,203 		JBrowse link
G Cxxc1 CXXC finger protein 1 ISO RGD PMID:21814290 RGD:9587757 NCBI chrNW_004624778:13,908,430...13,915,273
Ensembl chrNW_004624778:13,908,221...13,914,359 		JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables ISO (MGI:4818833|PMID:20616082), (MGI:4839662|PMID:20951351)
(PMID:20616082), (PMID:20951351)		 UniProt PMID:20616082 PMID:20951351 MGI:4818833 MGI:4839662 NCBI chrNW_004624736:5,525,417...5,641,612
Ensembl chrNW_004624736:5,525,408...5,645,636 		JBrowse link
G E2f1 E2F transcription factor 1 enables ISO (PMID:15735762) UniProt PMID:15735762 NCBI chrNW_004624842:5,602,432...5,612,951
Ensembl chrNW_004624842:5,602,432...5,612,951 		JBrowse link
G E2f2 E2F transcription factor 2 enables ISO (PMID:15735762) UniProt PMID:15735762 NCBI chrNW_004624764:8,132,283...8,158,190
Ensembl chrNW_004624764:8,135,470...8,157,731 		JBrowse link
G E2f3 E2F transcription factor 3 enables ISO (PMID:15735762) UniProt PMID:15735762 NCBI chrNW_004624756:6,182,087...6,266,097
Ensembl chrNW_004624756:6,185,366...6,266,000 		JBrowse link
G E2f7 E2F transcription factor 7 enables ISO (PMID:22903062) UniProt PMID:22903062 NCBI chrNW_004624750:21,010,347...21,063,655
Ensembl chrNW_004624750:21,010,339...21,063,757 		JBrowse link
G E2f8 E2F transcription factor 8 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:10,652,749...10,670,886
Ensembl chrNW_004624766:10,652,745...10,669,909 		JBrowse link
G Ell elongation factor for RNA polymerase II enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624908:1,665,407...1,709,509
Ensembl chrNW_004624908:1,666,647...1,709,425 		JBrowse link
G Ell2 elongation factor for RNA polymerase II 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:14,515,727...14,583,805 JBrowse link
G Epas1 endothelial PAS domain protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:27,747,770...27,831,213
Ensembl chrNW_004624738:27,747,696...27,834,054 		JBrowse link
G Esrrb estrogen related receptor beta enables ISO (MGI:5529430|PMID:23508100), (MGI:5887187|PMID:26206133)
(PMID:23508100), (PMID:26206133)		 UniProt PMID:23508100 PMID:26206133 MGI:5529430 MGI:5887187 NCBI chrNW_004624734:25,261,493...25,369,092
Ensembl chrNW_004624734:25,261,493...25,430,045 		JBrowse link
G Foxn2 forkhead box N2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:29,538,099...29,609,214
Ensembl chrNW_004624738:29,538,123...29,609,618 		JBrowse link
G Foxn4 forkhead box N4 enables ISO (PMID:22323600)
(MGI:5314555|PMID:22323600)		 UniProt PMID:22323600 MGI:5314555 NCBI chrNW_004624747:11,122,463...11,149,505
Ensembl chrNW_004624747:11,123,615...11,149,571 		JBrowse link
G Gata1 GATA binding protein 1 enables ISO (MGI:5009777|PMID:20855530) UniProt PMID:20855530 MGI:5009777 NCBI chrNW_004624893:595,948...602,980
Ensembl chrNW_004624893:595,967...602,979 		JBrowse link
G Gata3 GATA binding protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392 		JBrowse link
G Gata4 GATA binding protein 4 enables ISO PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chrNW_004624758:25,278,878...25,319,317
Ensembl chrNW_004624758:25,278,874...25,319,318 		JBrowse link
G Gata5 GATA binding protein 5 enables ISO (MGI:5009777|PMID:20855530)
(PMID:20855530)		 UniProt PMID:20855530 MGI:5009777 NCBI chrNW_004624741:28,310,679...28,322,209
Ensembl chrNW_004624741:28,310,201...28,321,095 		JBrowse link
G Gata6 GATA binding protein 6 enables ISO PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chrNW_004624770:9,772,818...9,799,837
Ensembl chrNW_004624770:9,772,818...9,798,259 		JBrowse link
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:11,462,865...11,466,559
Ensembl chrNW_004624744:11,462,847...11,467,870 		JBrowse link
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 enables ISO (MGI:5284767|PMID:18239137)
(PMID:18239137)		 BHF-UCL PMID:18239137 MGI:5284767 NCBI chrNW_004624753:375,163...394,402
Ensembl chrNW_004624753:375,279...384,379 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha enables ISO (PMID:31368162) BHF-UCL PMID:31368162 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705 		JBrowse link
G Hmga1 high mobility group AT-hook 1 enables ISO (PMID:9253416) CAFA PMID:9253416 NCBI chrNW_004624754:22,888,052...22,900,685
Ensembl chrNW_004624754:22,892,226...22,898,807 		JBrowse link
G Hmgb2 high mobility group box 2 enables ISS AgBase GO_REF:0000024 NCBI chrNW_004624769:4,834,998...4,837,111 JBrowse link
G Hnf1b HNF1 homeobox B enables ISO (PMID:14570708), (PMID:15067314), (PMID:16274963), (PMID:1685988) RGD
MGI		 PMID:1673926 PMID:1685988 PMID:14570708 PMID:15067314 PMID:16274963 RGD:729944 NCBI chrNW_004624871:4,662,104...4,713,125
Ensembl chrNW_004624871:4,661,669...4,712,960 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:16640558 RGD:12904755 NCBI chrNW_004624790:10,039,344...10,065,167
Ensembl chrNW_004624790:10,038,999...10,100,649 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:15361071 RGD:10002777 NCBI chrNW_004624809:7,538,568...7,548,272 JBrowse link
G Hoxa13 homeobox A13 enables ISO (PMID:27706137) MGI PMID:27706137 NCBI chrNW_004624739:3,405,860...3,410,426
Ensembl chrNW_004624739:3,406,436...3,410,851 		JBrowse link
G Hoxd13 homeobox D13 enables ISO (PMID:27706137) MGI PMID:27706137 NCBI chrNW_004624787:13,233,932...13,237,210
Ensembl chrNW_004624787:13,233,932...13,238,503 		JBrowse link
G Irf4 interferon regulatory factor 4 enables ISO (MGI:6269211|PMID:30413670)
(PMID:30413670)		 ARUK-UCL PMID:30413670 MGI:6269211 NCBI chrNW_004624756:23,917,111...23,931,482
Ensembl chrNW_004624756:23,918,323...23,931,501 		JBrowse link
G Irf7 interferon regulatory factor 7 enables ISO (MGI:5792628|PMID:27129230)
(PMID:27129230)		 UniProt PMID:27129230 MGI:5792628 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
G Isl1 ISL LIM homeobox 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624759:7,996,177...8,006,281
Ensembl chrNW_004624759:7,994,242...8,006,311 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables ISO (PMID:15545629) MGI PMID:15545629 NCBI chrNW_004624830:1,320,034...1,422,774
Ensembl chrNW_004624830:1,321,387...1,424,389 		JBrowse link
G Lhx1 LIM homeobox 1 enables ISO (PMID:26494787) MGI PMID:26494787 NCBI chrNW_004624871:3,954,490...3,961,861
Ensembl chrNW_004624871:3,954,504...3,963,033 		JBrowse link
G Mef2c myocyte enhancer factor 2C enables ISO (PMID:16140986), (PMID:20399744) MGI PMID:16140986 PMID:20399744 NCBI chrNW_004624743:8,072,871...8,235,174
Ensembl chrNW_004624743:8,072,673...8,235,252 		JBrowse link
G Mixl1 Mix paired-like homeobox enables ISO (MGI:5448504|PMID:22265737) BHF-UCL PMID:22265737 MGI:5448504 NCBI chrNW_004624807:322,723...325,089
Ensembl chrNW_004624807:322,723...326,149 		JBrowse link
G Msx1 msh homeobox 1 enables ISO (PMID:27741242) MGI PMID:27741242 NCBI chrNW_004624755:21,857,360...21,861,235
Ensembl chrNW_004624755:21,857,461...21,861,337 		JBrowse link
G Mtf1 metal regulatory transcription factor 1 enables ISO (PMID:15735762)
(PMID:10931824), (PMID:10952993), (PMID:16886906), (PMID:9582278)		 UniProt
MGI		 PMID:9582278 PMID:10931824 PMID:10952993 PMID:15735762 PMID:16886906 NCBI chrNW_004624764:20,510,925...20,557,134
Ensembl chrNW_004624764:20,515,307...20,557,105 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO (PMID:15511642) MGI PMID:15511642 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806 		JBrowse link
G Myod1 myogenic differentiation 1 enables ISO (PMID:12486129), (PMID:19121967) MGI PMID:12486129 PMID:19121967 NCBI chrNW_004624766:9,345,390...9,347,985
Ensembl chrNW_004624766:9,345,613...9,347,326 		JBrowse link
G Myog myogenin enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624807:7,742,926...7,753,149
Ensembl chrNW_004624807:7,749,852...7,753,336 		JBrowse link
G Myt1 myelin transcription factor 1 enables ISO (PMID:17442045) MGI PMID:17442045 NCBI chrNW_004624741:29,779,177...29,837,606
Ensembl chrNW_004624741:29,775,504...29,837,606 		JBrowse link
G Nfe2 nuclear factor, erythroid 2 contributes_to ISO (PMID:16263792) GO_Central PMID:16263792 NCBI chrNW_004624904:2,324,186...2,332,204
Ensembl chrNW_004624904:2,322,758...2,332,194 		JBrowse link
G Nfic nuclear factor I C ISO RGD PMID:10521600 RGD:633408 NCBI chrNW_004624828:5,896,957...5,946,512
Ensembl chrNW_004624828:5,897,024...5,946,453 		JBrowse link
G Nkx2-2 NK2 homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:21,857,911...21,860,128
Ensembl chrNW_004624741:21,852,205...21,860,040 		JBrowse link
G Notch1 notch receptor 1 enables ISO (PMID:18239137) BHF-UCL PMID:18239137 NCBI chrNW_004624760:1,636,331...1,676,398
Ensembl chrNW_004624760:1,634,702...1,676,531 		JBrowse link
G Notch2 notch receptor 2 enables ISO (PMID:18239137) BHF-UCL PMID:18239137 NCBI chrNW_004624772:15,572,350...15,726,312
Ensembl chrNW_004624772:15,571,998...15,726,426 		JBrowse link
G Notch4 notch receptor 4 enables ISO (PMID:18239137) BHF-UCL PMID:18239137 NCBI chrNW_004624754:24,108,661...24,128,053 JBrowse link
G Pax2 paired box 2 enables ISO (PMID:19118900)
(PMID:17785448)
(MGI:3768605|PMID:17785448)		 UniProt PMID:17785448 PMID:19118900 MGI:3768605 NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 enables ISO (MGI:5490149|PMID:23495099)
(PMID:23495099)		 AgBase PMID:23495099 MGI:5490149 NCBI chrNW_004624754:24,758,055...24,764,723 JBrowse link
G Runx2 RUNX family transcription factor 2 enables ISO (MGI:6453224|PMID:31545469) ARUK-UCL PMID:31545469 MGI:6453224 NCBI chrNW_004624754:14,601,574...14,868,469
Ensembl chrNW_004624754:14,679,974...14,867,729 		JBrowse link
G Sall1 spalt like transcription factor 1 enables ISO (MGI:4946171|PMID:21062744) BHF-UCL PMID:21062744 MGI:4946171 NCBI chrNW_004624757:5,572,510...5,587,623
Ensembl chrNW_004624757:5,572,528...5,587,617 		JBrowse link
G Scx scleraxis bHLH transcription factor enables ISO (PMID:17430895) MGI PMID:17430895 NCBI chrNW_004624735:12,579,963...12,583,128
Ensembl chrNW_004624735:12,579,956...12,581,736 		JBrowse link
G Serinc4 serine incorporator 4 enables ISO (MGI:5448843|PMID:23273992)
(PMID:23273992)		 UniProt PMID:23273992 MGI:5448843 NCBI chrNW_004624804:10,819,222...10,823,107 JBrowse link
G Smad3 SMAD family member 3 enables ISO (PMID:32141990)
(PMID:21947082)		 BHF-UCL
UniProt		 PMID:21947082 PMID:32141990 NCBI chrNW_004624781:5,795,652...5,890,047
Ensembl chrNW_004624781:5,795,652...5,890,371 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 enables ISO (PMID:28636939) MGI PMID:28636939 NCBI chrNW_004624737:35,698,722...35,730,854
Ensembl chrNW_004624737:35,694,566...35,730,829 		JBrowse link
G Sox11 SRY-box transcription factor 11 enables ISO (MGI:5285123|PMID:21527504), (MGI:5285167|PMID:19808959)
(PMID:19808959), (PMID:21527504)		 UniProt PMID:19808959 PMID:21527504 MGI:5285123 MGI:5285167 NCBI chrNW_004624846:4,043,010...4,046,660
Ensembl chrNW_004624846:4,044,893...4,046,248 		JBrowse link
G Sox5 SRY-box transcription factor 5 enables ISO PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chrNW_004624752:14,986,146...15,382,687
Ensembl chrNW_004624752:14,985,942...15,378,465 		JBrowse link
G Sox6 SRY-box transcription factor 6 enables ISO PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chrNW_004624766:7,683,492...8,301,823
Ensembl chrNW_004624766:7,689,775...8,084,764 		JBrowse link
G Sox8 SRY-box transcription factor 8 enables ISO (PMID:12732652), (PMID:15102707) MGI PMID:12732652 PMID:15102707 NCBI chrNW_004624913:1,759,460...1,764,242
Ensembl chrNW_004624913:1,759,548...1,764,344 		JBrowse link
G Sox9 SRY-box transcription factor 9 enables ISO PMID:26150426
(PMID:10805756), (PMID:17525254), (PMID:22500632)
(MGI:5142387|PMID:10805756), (MGI:5284779|PMID:17525254), (PMID:22500632)		 UniProt
MGI		 PMID:10805756 PMID:17525254 PMID:22500632 PMID:26150426 MGI:5142387 MGI:5284779 RGD:11526869 RGD:8553866 NCBI chrNW_004624801:2,296,353...2,300,853
Ensembl chrNW_004624801:2,296,168...2,301,596 		JBrowse link
G Sp1 Sp1 transcription factor enables ISO (PMID:15511642), (PMID:19943855), (PMID:9705320) MGI PMID:9705320 PMID:15511642 PMID:19943855 NCBI chrNW_004624904:1,475,664...1,507,588 JBrowse link
G Sp3 Sp3 transcription factor enables ISO (PMID:15511642), (PMID:19943855) MGI PMID:15511642 PMID:19943855 NCBI chrNW_004624787:11,144,581...11,193,520 JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO (MGI:5922877|PMID:28338898), (MGI:6453080|PMID:31314592), (MGI:6459415|PMID:30718772), (MGI:6508515|PMID:30355733)
(PMID:30171019), (PMID:30413670)
(PMID:28481873), (PMID:30718772), (PMID:31018969), (PMID:31314592)
(MGI:6269211|PMID:30413670), (MGI:6508514|PMID:30171019)		 ARUK-UCL PMID:28338898 PMID:28481873 PMID:30171019 PMID:30355733 PMID:30413670 More... MGI:5922877 MGI:6269211 MGI:6453080 MGI:6459415 MGI:6508514 MGI:6508515 NCBI chrNW_004624767:1,376,649...1,404,382
Ensembl chrNW_004624767:1,394,704...1,404,406 		JBrowse link
G Tbx19 T-box transcription factor 19 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624826:6,243,809...6,268,973
Ensembl chrNW_004624826:6,243,809...6,267,989 		JBrowse link
G Tcf3 transcription factor 3 enables ISO (PMID:16140986) MGI PMID:16140986 NCBI chrNW_004624828:7,090,562...7,119,970
Ensembl chrNW_004624828:7,090,605...7,121,428 		JBrowse link
G Tfap2a transcription factor AP-2 alpha enables ISO (PMID:19943855) MGI PMID:19943855 NCBI chrNW_004624756:15,413,950...15,436,037
Ensembl chrNW_004624756:15,418,260...15,436,379 		JBrowse link
G Tfap2b transcription factor AP-2 beta enables ISO (PMID:16373396) UniProt PMID:16373396 NCBI chrNW_004624855:5,353,347...5,381,454
Ensembl chrNW_004624855:5,355,239...5,381,477 		JBrowse link
G Tfcp2 transcription factor CP2 enables ISO (PMID:16263792) UniProt PMID:16263792 NCBI chrNW_004624816:1,082,788...1,137,096
Ensembl chrNW_004624816:1,082,794...1,137,091 		JBrowse link
G Tfdp1 transcription factor Dp-1 enables ISO (PMID:15448153) MGI PMID:15448153 NCBI chrNW_004624793:481,791...515,142
Ensembl chrNW_004624793:481,687...515,228 		JBrowse link
G Tiparp TCDD inducible poly(ADP-ribose) polymerase enables ISO (PMID:23275542) MGI PMID:23275542 NCBI chrNW_004624730:34,262,630...34,293,034
Ensembl chrNW_004624730:34,262,468...34,293,087 		JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:10329733) ARUK-UCL PMID:10329733 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 enables ISO (PMID:27027434) BHF-UCL PMID:27027434 NCBI chrNW_004624739:11,352,040...11,354,019
Ensembl chrNW_004624739:11,352,141...11,352,809 		JBrowse link
G Uhrf1 ubiquitin like with PHD and ring finger domains 1 enables ISO (PMID:10646863) BHF-UCL PMID:10646863 NCBI chrNW_004624828:4,898,786...4,929,136
Ensembl chrNW_004624828:4,898,677...4,929,872 		JBrowse link
G Xbp1 X-box binding protein 1 enables ISO (PMID:2196176) UniProt PMID:2196176 NCBI chrNW_004624747:5,123,085...5,128,465 JBrowse link
G Yy1 YY1 transcription factor enables ISO (PMID:16260628)
(PMID:15329343)		 UniProt
AgBase		 PMID:15329343 PMID:16260628 NCBI chrNW_004624734:3,846,753...3,875,294
Ensembl chrNW_004624734:3,846,765...3,875,294 		JBrowse link
G Yy2 YY2 transcription factor enables ISO (PMID:16260628)
(MGI:3607410|PMID:16260628)		 UniProt PMID:16260628 MGI:3607410 NCBI chrNW_004624829:6,811,644...6,815,253 JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B enables ISO (PMID:8702912) MGI PMID:8702912 NCBI chrNW_004624885:2,474,427...2,489,024
Ensembl chrNW_004624885:2,475,727...2,489,030 		JBrowse link
G Znf322 zinc finger protein 322 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624756:248,724...265,583 JBrowse link
G Znf395 zinc finger protein 395 enables ISO (PMID:11853404)
(PMID:17693064)		 ARUK-UCL
MGI		 PMID:11853404 PMID:17693064 NCBI chrNW_004624758:23,029,522...23,077,390
Ensembl chrNW_004624758:23,029,342...23,079,701 		JBrowse link
G Znf516 zinc finger protein 516 enables ISO (MGI:5616937|PMID:25578880)
(PMID:25578880)		 UniProt PMID:25578880 MGI:5616937 NCBI chrNW_004624806:4,103,811...4,223,294
Ensembl chrNW_004624806:4,153,663...4,213,110 		JBrowse link
G Znf704 zinc finger protein 704 enables ISO (PMID:17693064) MGI PMID:17693064 NCBI chrNW_004624744:10,552,836...10,758,556
Ensembl chrNW_004624744:10,552,851...10,746,603 		JBrowse link
core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 enables ISO (PMID:25336585) BHF-UCL PMID:25336585 NCBI chrNW_004624764:18,904,607...18,940,594
Ensembl chrNW_004624764:18,904,639...18,940,594 		JBrowse link
G Ago2 argonaute RISC catalytic component 2 enables ISO (PMID:25336585) BHF-UCL PMID:25336585 NCBI chrNW_004624735:15,785,831...15,853,854
Ensembl chrNW_004624735:15,785,114...15,842,435 		JBrowse link
G Drap1 DR1 associated protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:20,484,318...20,501,763
Ensembl chrNW_004624767:20,496,930...20,502,511 		JBrowse link
G Foxp1 forkhead box P1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624773:5,543,529...6,076,522
Ensembl chrNW_004624773:5,543,536...5,883,131 		JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (PMID:23629966) CAFA PMID:23629966 NCBI chrNW_004624764:15,510,655...15,552,020
Ensembl chrNW_004624764:15,510,866...15,552,025 		JBrowse link
G Isl1 ISL LIM homeobox 1 ISO RGD PMID:11043578 RGD:8554127 NCBI chrNW_004624759:7,996,177...8,006,281
Ensembl chrNW_004624759:7,994,242...8,006,311 		JBrowse link
G Jph2 junctophilin 2 enables ISO (MGI:6270069|PMID:30409805) UniProt PMID:30409805 MGI:6270069 NCBI chrNW_004624790:10,250,403...10,320,279
Ensembl chrNW_004624790:10,250,472...10,319,110 		JBrowse link
G Kcnip3 potassium voltage-gated channel interacting protein 3 enables ISO (MGI:5882899|PMID:15746104)
(PMID:15746104)		 CAFA PMID:15746104 MGI:5882899 NCBI chrNW_004624749:2,096,886...2,128,972
Ensembl chrNW_004624749:2,055,432...2,128,898 		JBrowse link
G Klf10 KLF transcription factor 10 enables ISO (MGI:4438787|PMID:20070857)
(PMID:20070857)		 UniProt PMID:20070857 MGI:4438787 NCBI chrNW_004624763:19,582,019...19,592,447
Ensembl chrNW_004624763:19,581,730...19,587,730 		JBrowse link
G Mmp12 matrix metallopeptidase 12 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO (PMID:30873824) ARUK-UCL PMID:30873824 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806 		JBrowse link
G Nkx2-1 NK2 homeobox 1 enables ISO PMID:9425125 CAFA PMID:9425125 RGD:12792996 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517 		JBrowse link
G Npm1 nucleophosmin 1 enables ISO (PMID:19160485) CAFA PMID:19160485 NCBI chrNW_004624733:18,645,269...18,655,073 JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632 		JBrowse link
G Polr2a RNA polymerase II subunit A enables ISO (MGI:5428344|PMID:22723415)
(PMID:22723415)		 BHF-UCL PMID:22723415 MGI:5428344 NCBI chrNW_004624786:10,098,133...10,122,783
Ensembl chrNW_004624786:10,097,294...10,122,893 		JBrowse link
G Snapc3 small nuclear RNA activating complex polypeptide 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:19,569,562...19,609,950
Ensembl chrNW_004624736:19,569,577...19,612,907 		JBrowse link
G Taf4 TATA-box binding protein associated factor 4 contributes_to ISO (PMID:15601843) GO_Central PMID:15601843 NCBI chrNW_004624741:27,881,850...27,948,543
Ensembl chrNW_004624741:27,883,183...27,909,304 		JBrowse link
G Tbp TATA-box binding protein enables ISO (PMID:9841876) CAFA PMID:9841876 NCBI chrNW_004624850:6,359,382...6,375,391
Ensembl chrNW_004624850:6,359,418...6,375,391 		JBrowse link
G Tp53 tumor protein p53 enables ISO (PMID:23629966) CAFA PMID:23629966 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218 		JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 enables ISO (PMID:19160485) CAFA PMID:19160485 NCBI chrNW_004624764:2,144,555...2,174,177
Ensembl chrNW_004624764:2,144,878...2,174,545 		JBrowse link
E-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor enables ISO (MGI:4820700|PMID:20106950)
(PMID:20106950)		 UniProt PMID:20106950 MGI:4820700 NCBI chrNW_004624739:12,939,183...12,987,574
Ensembl chrNW_004624739:12,942,165...12,987,973 		JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO (PMID:10903890), (PMID:11736660) UniProt PMID:10903890 PMID:11736660 NCBI chrNW_004624750:5,487,046...5,489,399
Ensembl chrNW_004624750:5,487,053...5,493,339 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO (PMID:14561729) UniProt PMID:14561729 NCBI chrNW_004624767:15,107,157...15,111,696
Ensembl chrNW_004624767:15,107,159...15,109,191 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:21,517,650...21,519,543
Ensembl chrNW_004624757:21,517,809...21,518,864 		JBrowse link
G Atoh7 atonal bHLH transcription factor 7 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:2,606,689...2,610,231
Ensembl chrNW_004624754:2,605,173...2,650,354 		JBrowse link
G Atoh8 atonal bHLH transcription factor 8 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:17,397,332...17,428,980
Ensembl chrNW_004624749:17,399,111...17,428,893 		JBrowse link
G Bhlha15 basic helix-loop-helix family member a15 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:31,671,820...31,676,045
Ensembl chrNW_004624740:31,672,397...31,674,205 		JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 enables ISO (PMID:12397359), (PMID:12624110), (PMID:14672706), (PMID:15193144), (PMID:15560782), (PMID:18411297), (PMID:28797635)
(PMID:12397359), (PMID:15147242), (PMID:17487425), (PMID:30012868)
(MGI:2388855|PMID:12397359), (MGI:5297789|PMID:15147242), (MGI:5306297|PMID:17487425), (MGI:6282958|PMID:30012868)		 UniProt PMID:12397359 PMID:12624110 PMID:14672706 PMID:15147242 PMID:15193144 More... MGI:2388855 MGI:5297789 MGI:5306297 MGI:6282958 NCBI chrNW_004624773:15,413,400...15,418,220
Ensembl chrNW_004624773:15,413,365...15,420,123 		JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 enables ISO (MGI:2388855|PMID:12397359), (MGI:5297789|PMID:15147242), (MGI:5297791|PMID:12657651), (MGI:5306297|PMID:17487425)
(PMID:14672706), (PMID:15193144)		 BHF-UCL PMID:12397359 PMID:12657651 PMID:14672706 PMID:15147242 PMID:15193144 More... MGI:2388855 MGI:5297789 MGI:5297791 MGI:5306297 NCBI chrNW_004624752:13,000,238...13,004,777
Ensembl chrNW_004624752:13,000,525...13,003,079 		JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:5,295,120...5,391,645
Ensembl chrNW_004624766:5,317,635...5,391,645 		JBrowse link
G Ciart circadian associated repressor of transcription enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:18,036,407...18,040,571
Ensembl chrNW_004624772:18,037,066...18,040,692 		JBrowse link
G Clock clock circadian regulator enables ISO (MGI:4410413|PMID:19605937), (MGI:4820700|PMID:20106950), (MGI:4837055|PMID:20430893), (MGI:5553247|PMID:12738229), (MGI:6282958|PMID:30012868)
(PMID:12738229), (PMID:19605937), (PMID:20106950), (PMID:20430893), (PMID:30012868)
(PMID:18411297), (PMID:23785138)		 UniProt
BHF-UCL		 PMID:12738229 PMID:18411297 PMID:19605937 PMID:20106950 PMID:20430893 More... MGI:4410413 MGI:4820700 MGI:4837055 MGI:5553247 MGI:6282958 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 enables ISO (MGI:5009503|PMID:19129230), (MGI:5292598|PMID:21768648), (MGI:5464222|PMID:23133559), (MGI:5545849|PMID:24385426)
(PMID:19129230), (PMID:21768648), (PMID:23133559), (PMID:24385426)		 UniProt PMID:19129230 PMID:21768648 PMID:23133559 PMID:24385426 MGI:5009503 MGI:5292598 MGI:5464222 MGI:5545849 NCBI chrNW_004624750:2,465,999...2,529,251 JBrowse link
G Figla folliculogenesis specific bHLH transcription factor contributes_to ISO (PMID:15044608) UniProt PMID:15044608 NCBI chrNW_004624762:2,599,627...2,612,921 JBrowse link
G Gata3 GATA binding protein 3 enables ISO (PMID:20855495) BHF-UCL PMID:20855495 NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 enables
contributes_to		 ISO (PMID:15486975)
(PMID:11812799)
(PMID:20144608)
(MGI:4362015|PMID:11812799)		 UniProt
BHF-UCL
MGI		 PMID:11812799 PMID:15486975 PMID:20144608 MGI:4362015 NCBI chrNW_004624769:5,035,669...5,038,333
Ensembl chrNW_004624769:5,033,932...5,038,343 		JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (MGI:5568140|PMID:24736997)
(PMID:24736997)		 UniProt PMID:24736997 MGI:5568140 NCBI chrNW_004624764:15,510,655...15,552,020
Ensembl chrNW_004624764:15,510,866...15,552,025 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 enables ISO
IEA		 RGD
TreeGrafter		 PMID:19670267 GO_REF:0000118 RGD:9685170 NCBI chrNW_004624730:63,563,848...63,566,303
Ensembl chrNW_004624730:63,563,754...63,566,781 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha enables ISO (MGI:5528778|PMID:24011070)
(PMID:24011070)		 BHF-UCL PMID:24011070 MGI:5528778 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705 		JBrowse link
G Max MYC associated factor X enables ISO (PMID:16171389) CAFA PMID:16171389 NCBI chrNW_004624734:35,925,827...35,952,375 JBrowse link
G Mitf melanocyte inducing transcription factor enables ISO (PMID:27889061)
(PMID:23207919)
(MGI:5461240|PMID:23207919)		 UniProt PMID:23207919 PMID:27889061 MGI:5461240 NCBI chrNW_004624773:4,346,072...4,561,218
Ensembl chrNW_004624773:4,346,007...4,562,969 		JBrowse link
G Mybbp1a MYB binding protein 1a enables ISO (MGI:5009503|PMID:19129230)
(PMID:19129230)		 UniProt PMID:19129230 MGI:5009503 NCBI chrNW_004624786:7,103,811...7,118,569 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor enables ISO (PMID:19545562)
(PMID:18818310), (PMID:27791094)		 UniProt
ARUK-UCL		 PMID:18818310 PMID:19545562 PMID:27791094 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806 		JBrowse link
G Myod1 myogenic differentiation 1 enables ISO (PMID:10652346), (PMID:15706034)
(MGI:1934945|PMID:10652346), (MGI:5508271|PMID:15706034)		 RGD
UniProt		 PMID:10652346 PMID:11600477 PMID:15706034 MGI:1934945 MGI:5508271 RGD:9686083 NCBI chrNW_004624766:9,345,390...9,347,985
Ensembl chrNW_004624766:9,345,613...9,347,326 		JBrowse link
G Myog myogenin enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624807:7,742,926...7,753,149
Ensembl chrNW_004624807:7,749,852...7,753,336 		JBrowse link
G Neurod1 neuronal differentiation 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624844:3,493,819...3,497,814
Ensembl chrNW_004624844:3,494,677...3,497,759 		JBrowse link
G Neurod2 neuronal differentiation 2 enables ISO (MGI:2686763|PMID:14697366), (MGI:3789797|PMID:18214987)
(PMID:14697366), (PMID:18214987)		 UniProt PMID:14697366 PMID:18214987 MGI:2686763 MGI:3789797 NCBI chrNW_004624795:3,453,525...3,457,618
Ensembl chrNW_004624795:3,453,591...3,457,625 		JBrowse link
G Neurod4 neuronal differentiation 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624983:79,564...89,114
Ensembl chrNW_004624983:85,494...86,486 		JBrowse link
G Neurod6 neuronal differentiation 6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624783:533,727...537,180
Ensembl chrNW_004624783:534,295...537,166 		JBrowse link
G Neurog1 neurogenin 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624733:11,497,872...11,499,957
Ensembl chrNW_004624733:11,498,249...11,498,974 		JBrowse link
G Neurog2 neurogenin 2 enables ISO (MGI:2686763|PMID:14697366)
(PMID:14697366)		 UniProt PMID:14697366 MGI:2686763 NCBI chrNW_004624838:6,324,036...6,325,511 JBrowse link
G Neurog3 neurogenin 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:3,817,400...3,818,047 JBrowse link
G Npas2 neuronal PAS domain protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624749:5,636,878...5,790,670
Ensembl chrNW_004624749:5,636,782...5,790,779 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497 		JBrowse link
G Per1 period circadian regulator 1 enables ISO (PMID:18411297) BHF-UCL PMID:18411297 NCBI chrNW_004624786:10,706,495...10,722,110
Ensembl chrNW_004624786:10,707,075...10,719,859 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma enables ISO (MGI:3830801|PMID:19041764)
(PMID:19041764)		 UniProt PMID:19041764 MGI:3830801 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 enables ISO (MGI:5464222|PMID:23133559) UniProt PMID:23133559 MGI:5464222 NCBI chrNW_004624820:9,599,867...9,608,578
Ensembl chrNW_004624820:9,599,734...9,608,703 		JBrowse link
G Ptf1a pancreas associated transcription factor 1a enables ISO (PMID:22232429) MGI PMID:22232429 NCBI chrNW_004624796:5,548,982...5,550,563
Ensembl chrNW_004624796:5,549,184...5,550,439 		JBrowse link
G Scx scleraxis bHLH transcription factor contributes_to
enables		 ISO (PMID:10775504)
(PMID:19828133)
(PMID:20059955), (PMID:7743923)
(MGI:4418577|PMID:20059955), (MGI:72077|PMID:7743923)
(MGI:5294531|PMID:19828133)		 UniProtKB
UniProt		 PMID:7743923 PMID:10775504 PMID:19828133 PMID:20059955 MGI:4418577 MGI:5294531 MGI:72077 NCBI chrNW_004624735:12,579,963...12,583,128
Ensembl chrNW_004624735:12,579,956...12,581,736 		JBrowse link
G Snai1 snail family transcriptional repressor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:5,509,541...5,515,240
Ensembl chrNW_004624790:5,509,311...5,515,266 		JBrowse link
G Snai2 snail family transcriptional repressor 2 enables ISO (PMID:11912130), (PMID:15737616), (PMID:16707493) ARUK-UCL PMID:11912130 PMID:15737616 PMID:16707493 NCBI chrNW_004624735:6,594,564...6,598,288
Ensembl chrNW_004624735:6,594,695...6,598,757 		JBrowse link
G Spz1 spermatogenic leucine zipper 1 enables ISO (PMID:30541061) MGI PMID:30541061 NCBI chrNW_004624743:1,321,398...1,322,780 JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 enables ISO (PMID:15358760) BHF-UCL PMID:15358760 NCBI chrNW_004624752:6,815,075...6,871,674
Ensembl chrNW_004624752:6,816,468...6,871,567 		JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor enables ISO (PMID:20855495)
(PMID:18550854)		 BHF-UCL
MGI		 PMID:18550854 PMID:20855495 NCBI chrNW_004624859:5,586,489...5,601,225
Ensembl chrNW_004624859:5,586,977...5,601,460 		JBrowse link
G Tcf12 transcription factor 12 enables ISO (MGI:3789797|PMID:18214987) UniProt PMID:18214987 MGI:3789797 NCBI chrNW_004624781:14,433,557...14,847,634 JBrowse link
G Tcf15 transcription factor 15 enables ISO (MGI:6508495|PMID:15226298) UniProt PMID:15226298 MGI:6508495 NCBI chrNW_004624741:1,689,397...1,694,934
Ensembl chrNW_004624741:1,689,431...1,694,815 		JBrowse link
G Tcf21 transcription factor 21 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624942:890,465...893,679
Ensembl chrNW_004624942:890,365...893,811 		JBrowse link
G Tcf3 transcription factor 3 contributes_to
enables		 ISO PMID:19828133
(PMID:11812799)
(PMID:15226298), (PMID:18214987), (PMID:30541061)
(MGI:3789797|PMID:18214987), (MGI:6508495|PMID:15226298), (PMID:30541061)
(MGI:1203942|PMID:9545521)
(PMID:15044608)
(PMID:10775504)
(PMID:10652346), (PMID:7933101)
(MGI:4362015|PMID:11812799)		 UniProt
BHF-UCL
UniProtKB
ARUK-UCL		 PMID:7933101 PMID:9545521 PMID:10652346 PMID:10775504 PMID:11812799 More... MGI:1203942 MGI:3789797 MGI:4362015 MGI:6508495 RGD:8553796 NCBI chrNW_004624828:7,090,562...7,119,970
Ensembl chrNW_004624828:7,090,605...7,121,428 		JBrowse link
G Tcf4 transcription factor 4 enables ISO (MGI:3789797|PMID:18214987), (MGI:85411|PMID:8978694)
(PMID:18214987), (PMID:8978694)		 BHF-UCL
UniProt		 PMID:8978694 PMID:18214987 MGI:3789797 MGI:85411 NCBI chrNW_004624792:686,360...1,030,199
Ensembl chrNW_004624792:686,774...1,027,397 		JBrowse link
G Tfap4 transcription factor AP-4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:2,044,322...2,105,571
Ensembl chrNW_004624824:2,044,235...2,058,662 		JBrowse link
G Tfe3 transcription factor binding to IGHM enhancer 3 enables ISO (MGI:7510300|PMID:20713358) UniProt PMID:20713358 MGI:7510300 NCBI chrNW_004624893:803,717...817,700
Ensembl chrNW_004624893:803,717...817,705 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 enables ISO (MGI:3623529|PMID:16502419), (MGI:4838344|PMID:20804746)
(PMID:24011070)
(MGI:5528778|PMID:24011070)
(PMID:17332325), (PMID:20804746)		 BHF-UCL PMID:16502419 PMID:17332325 PMID:20804746 PMID:24011070 MGI:3623529 MGI:4838344 MGI:5528778 NCBI chrNW_004624739:11,352,040...11,354,019
Ensembl chrNW_004624739:11,352,141...11,352,809 		JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 enables ISO (MGI:4830798|PMID:20346398), (MGI:7510300|PMID:20713358)
(PMID:20346398), (PMID:20713358)		 UniProt PMID:20346398 PMID:20713358 MGI:4830798 MGI:7510300 NCBI chrNW_004624805:3,964,448...4,044,546
Ensembl chrNW_004624805:3,964,450...4,042,527 		JBrowse link
estrogen response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624891:3,135,824...3,330,487
Ensembl chrNW_004624891:3,138,848...3,329,459 		JBrowse link
G Esr1 estrogen receptor 1 enables ISO (PMID:15345745), (PMID:15831516), (PMID:17975005), (PMID:9841876) BHF-UCL PMID:9841876 PMID:15345745 PMID:15831516 PMID:17975005 NCBI chrNW_004624785:6,164,507...6,601,302
Ensembl chrNW_004624785:6,164,379...6,601,326 		JBrowse link
G Esr2 estrogen receptor 2 enables ISO
IEA		 RGD
TreeGrafter		 PMID:9600083 GO_REF:0000118 RGD:728646 NCBI chrNW_004624734:36,742,913...36,862,993
Ensembl chrNW_004624734:36,759,104...36,825,295 		JBrowse link
G Esrra estrogen related receptor alpha enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:21,999,932...22,007,582
Ensembl chrNW_004624767:21,999,932...22,009,485 		JBrowse link
G Esrrb estrogen related receptor beta enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:25,261,493...25,369,092
Ensembl chrNW_004624734:25,261,493...25,430,045 		JBrowse link
G Esrrg estrogen related receptor gamma enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624835:815,230...1,326,376
Ensembl chrNW_004624835:812,742...1,015,767 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624774:2,496,276...2,603,894
Ensembl chrNW_004624774:2,495,304...2,602,632 		JBrowse link
G Trim24 tripartite motif containing 24 enables ISO (PMID:21164480) UniProt PMID:21164480 NCBI chrNW_004624765:18,966,663...19,079,857 JBrowse link
intronic transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 BCL6 transcription repressor enables ISO (PMID:24863065) MGI PMID:24863065 NCBI chrNW_004624730:69,145,035...69,167,583
Ensembl chrNW_004624730:69,154,080...69,167,689 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 enables ISO (MGI:4867118|PMID:20978075) UniProt PMID:20978075 MGI:4867118 NCBI chrNW_004624763:18,784,815...18,916,358
Ensembl chrNW_004624763:18,784,187...18,916,358 		JBrowse link
G Nkx2-1 NK2 homeobox 1 enables ISO (MGI:5613464|PMID:22955271)
(PMID:22955271)
(PMID:23143308)		 UniProt
MGI		 PMID:22955271 PMID:23143308 MGI:5613464 NCBI chrNW_004624838:300,902...304,944
Ensembl chrNW_004624838:300,458...305,517 		JBrowse link
G Thra thyroid hormone receptor alpha ISO RGD PMID:20368265 RGD:2324624 NCBI chrNW_004624795:3,109,663...3,132,494
Ensembl chrNW_004624795:3,108,854...3,132,464 		JBrowse link
mitochondrial promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp1 lon peptidase 1, mitochondrial NOT|enables ISO (PMID:9485316)
(PMID:12657466)		 UniProt
MGI		 PMID:9485316 PMID:12657466 NCBI chrNW_004624828:4,494,786...4,516,772
Ensembl chrNW_004624828:4,494,813...4,516,510 		JBrowse link
G Polrmt RNA polymerase mitochondrial enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:7,876,682...7,888,990
Ensembl chrNW_004624828:7,876,739...7,888,923 		JBrowse link
G Tfam transcription factor A, mitochondrial enables ISO (PMID:19304746)
(PMID:2628167)		 UniProt
MGI		 PMID:2628167 PMID:19304746 NCBI chrNW_004624791:5,183,276...5,198,986
Ensembl chrNW_004624791:5,179,195...5,198,611 		JBrowse link
N-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 enables ISO
IEA		 RGD
TreeGrafter		 PMID:22302822 GO_REF:0000118 RGD:9685391 NCBI chrNW_004624730:63,563,848...63,566,303
Ensembl chrNW_004624730:63,563,754...63,566,781 		JBrowse link
purine-rich negative regulatory element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elk3 ETS transcription factor ELK3 enables ISO (PMID:12933792) HGNC-UCL PMID:12933792 NCBI chrNW_004624750:11,059,604...11,114,878
Ensembl chrNW_004624750:11,059,226...11,114,923 		JBrowse link
G Pura purine rich element binding protein A enables ISO (MGI:3688338|PMID:12933792) HGNC-UCL PMID:12933792 MGI:3688338 NCBI chrNW_004624743:32,878,677...32,888,650
Ensembl chrNW_004624743:32,884,552...32,885,517 		JBrowse link
G Purb purine rich element binding protein B enables ISO PMID:12933792 HGNC-UCL PMID:12933792 RGD:1581942 NCBI chrNW_004624740:7,398,481...7,406,923
Ensembl chrNW_004624740:7,398,481...7,399,434 		JBrowse link
G Purg purine rich element binding protein G enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624780:13,051,994...13,085,431
Ensembl chrNW_004624780:13,052,024...13,085,529 		JBrowse link
retinoic acid-responsive element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myt1l myelin transcription factor 1 like enables ISO PMID:10606515 RGD
CAFA		 PMID:8631881 PMID:10606515 RGD:12793025 RGD:633486 NCBI chrNW_004624846:5,859,485...6,246,771
Ensembl chrNW_004624846:6,123,216...6,244,031 		JBrowse link
G Nr2f1 nuclear receptor subfamily 2 group F member 1 ISO RGD PMID:7797489 RGD:633499 NCBI chrNW_004624743:12,479,427...12,488,178
Ensembl chrNW_004624743:12,478,832...12,488,458 		JBrowse link
G Rara retinoic acid receptor alpha enables ISO (PMID:19917671) UniProt PMID:19917671 NCBI chrNW_004624795:2,935,432...2,975,226
Ensembl chrNW_004624795:2,934,731...2,967,232 		JBrowse link
G Rxra retinoid X receptor alpha enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:2,379,809...2,455,749
Ensembl chrNW_004624760:2,380,708...2,456,928 		JBrowse link
G Rxrb retinoid X receptor beta enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:23,607,046...23,613,399
Ensembl chrNW_004624754:23,606,955...23,613,508 		JBrowse link
G Rxrg retinoid X receptor gamma enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624826:3,723,056...3,969,597
Ensembl chrNW_004624826:3,736,290...3,780,338 		JBrowse link
G Znf536 zinc finger protein 536 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624794:5,305,029...5,744,694
Ensembl chrNW_004624794:5,359,695...5,602,220 		JBrowse link
RNA polymerase I cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pih1d1 PIH1 domain containing 1 NOT|enables ISO (PMID:22368283) UniProt PMID:22368283 NCBI chrNW_004624832:4,757,367...4,761,974
Ensembl chrNW_004624832:4,757,344...4,762,181 		JBrowse link
G Ubtf upstream binding transcription factor enables ISO (PMID:22368283) UniProt PMID:22368283 NCBI chrNW_004624795:768,627...779,174
Ensembl chrNW_004624795:768,697...780,639 		JBrowse link
RNA polymerase I core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz2a bromodomain adjacent to zinc finger domain 2A contributes_to ISO (PMID:22368283) GO_Central PMID:22368283 NCBI chrNW_004624802:11,410,424...11,448,810 JBrowse link
G Rrn3 RRN3 homolog, RNA polymerase I transcription factor enables ISO (PMID:22368283) UniProt PMID:22368283 NCBI chrNW_004624824:8,582,754...8,615,073
Ensembl chrNW_004624824:8,582,803...8,614,313 		JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 contributes_to ISO (PMID:22368283) GO_Central PMID:22368283 NCBI chrNW_004624828:2,893,075...2,985,968
Ensembl chrNW_004624828:2,893,096...2,985,968 		JBrowse link
G Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 contributes_to
enables		 ISO
IEA		 (PMID:22368283) GO_Central
Ensembl		 PMID:22368283 GO_REF:0000107 NCBI chrNW_004624747:10,362,149...10,396,580
Ensembl chrNW_004624747:10,361,260...10,396,719 		JBrowse link
G Taf1b TATA-box binding protein associated factor, RNA polymerase I subunit B enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624865:5,089,425...5,128,228
Ensembl chrNW_004624865:5,088,926...5,128,289 		JBrowse link
G Taf1c TATA-box binding protein associated factor, RNA polymerase I subunit C enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:3,403,122...3,412,709
Ensembl chrNW_004624746:3,406,644...3,412,188 		JBrowse link
G Tbp TATA-box binding protein enables ISO (PMID:11250903) UniProt PMID:11250903 NCBI chrNW_004624850:6,359,382...6,375,391
Ensembl chrNW_004624850:6,359,418...6,375,391 		JBrowse link
G Ubtf upstream binding transcription factor enables ISO (PMID:22368283) UniProt PMID:22368283 NCBI chrNW_004624795:768,627...779,174
Ensembl chrNW_004624795:768,697...780,639 		JBrowse link
RNA polymerase I transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpa CCAAT enhancer binding protein alpha enables ISO (PMID:20075868) UniProt PMID:20075868 NCBI chrNW_004624794:9,809,007...9,813,418 JBrowse link
RNA polymerase II cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 enables ISO (PMID:22053081) MGI PMID:22053081 NCBI chrNW_004624764:18,904,607...18,940,594
Ensembl chrNW_004624764:18,904,639...18,940,594 		JBrowse link
G App amyloid beta precursor protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Ar androgen receptor enables ISO (PMID:16728402), (PMID:25802280) NTNU_SB PMID:16728402 PMID:25802280 NCBI chrNW_004624891:3,135,824...3,330,487
Ensembl chrNW_004624891:3,138,848...3,329,459 		JBrowse link
G Arid3c AT-rich interaction domain 3C enables ISO (MGI:5295129|PMID:21955986) NTNU_SB PMID:21955986 MGI:5295129 NCBI chrNW_004624736:39,016,483...39,023,701
Ensembl chrNW_004624736:39,016,483...39,023,668 		JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624772:18,949,221...19,016,672
Ensembl chrNW_004624772:18,949,108...19,015,504 		JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:21,166,554...21,319,462
Ensembl chrNW_004624768:21,166,554...21,319,594 		JBrowse link
G Arx aristaless related homeobox enables ISO (MGI:3579957|PMID:15930104)
(PMID:22194193), (PMID:31691806)		 NTNU_SB
UniProt		 PMID:15930104 PMID:22194193 PMID:31691806 MGI:3579957 NCBI chrNW_004624897:1,279,138...1,303,210 JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO (PMID:11736660) NTNU_SB PMID:11736660 NCBI chrNW_004624750:5,487,046...5,489,399
Ensembl chrNW_004624750:5,487,053...5,493,339 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO (PMID:14561729) NTNU_SB PMID:14561729 NCBI chrNW_004624767:15,107,157...15,111,696
Ensembl chrNW_004624767:15,107,159...15,109,191 		JBrowse link
G Ascl5 achaete-scute family bHLH transcription factor 5 enables ISO (MGI:6359291|PMID:30426815)
(PMID:30426815)		 UniProt PMID:30426815 MGI:6359291 NCBI chrNW_004624807:9,558,031...9,559,263
Ensembl chrNW_004624807:9,558,031...9,558,624 		JBrowse link
G Atf1 activating transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624816:1,529,082...1,592,932
Ensembl chrNW_004624816:1,527,620...1,596,066 		JBrowse link
G Atf2 activating transcription factor 2 enables ISO (PMID:19861239)
(PMID:16405968)		 BHF-UCL
MGI		 PMID:16405968 PMID:19861239 NCBI chrNW_004624787:12,241,838...12,338,089 JBrowse link
G Atf3 activating transcription factor 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624771:18,009,111...18,060,796
Ensembl chrNW_004624771:18,050,039...18,060,802 		JBrowse link
G Atf4 activating transcription factor 4 enables
contributes_to		 IEA
ISO		 (PMID:27812542) Ensembl
MGI		 PMID:27812542 GO_REF:0000107 NCBI chrNW_004624752:8,822,955...8,825,019
Ensembl chrNW_004624752:8,822,740...8,825,032 		JBrowse link
G Atf6 activating transcription factor 6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624826:189,899...412,540
Ensembl chrNW_004624826:190,131...412,197 		JBrowse link
G Atf6b activating transcription factor 6 beta contributes_to
enables		 ISO
IEA		 (PMID:11256944) NTNU_SB
TreeGrafter		 PMID:11256944 GO_REF:0000118 NCBI chrNW_004624754:24,185,203...24,194,351
Ensembl chrNW_004624754:24,184,261...24,194,904 		JBrowse link
G Atf7 activating transcription factor 7 enables ISO (PMID:8288576) NTNU_SB PMID:8288576 NCBI chrNW_004624904:1,604,083...1,705,739
Ensembl chrNW_004624904:1,613,487...1,706,549 		JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables ISO (MGI:5574303|PMID:17826772)
(PMID:17826772)		 NTNU_SB PMID:17826772 MGI:5574303 NCBI chrNW_004624757:21,517,650...21,519,543
Ensembl chrNW_004624757:21,517,809...21,518,864 		JBrowse link
G Bach1 BTB domain and CNC homolog 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624745:17,321,379...17,343,911
Ensembl chrNW_004624745:17,321,460...17,340,463 		JBrowse link
G Bach2 BTB domain and CNC homolog 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624799:3,893,548...4,262,344
Ensembl chrNW_004624799:3,984,546...4,256,898 		JBrowse link
G Batf basic leucine zipper ATF-like transcription factor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624734:26,118,840...26,139,328
Ensembl chrNW_004624734:26,118,754...26,139,468 		JBrowse link
G Batf2 basic leucine zipper ATF-like transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:21,388,459...21,395,347
Ensembl chrNW_004624767:21,388,119...21,395,481 		JBrowse link
G Batf3 basic leucine zipper ATF-like transcription factor 3 enables ISO (PMID:15467742) NTNU_SB PMID:15467742 NCBI chrNW_004624771:18,102,722...18,112,640 JBrowse link
G Bcl11a BCL11 transcription factor A enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624833:1,367,878...1,468,257
Ensembl chrNW_004624833:1,367,781...1,468,400 		JBrowse link
G Bcl11b BCL11 transcription factor B enables ISO (PMID:16809611) MGI PMID:16809611 NCBI chrNW_004624734:4,560,362...4,649,219
Ensembl chrNW_004624734:4,560,699...4,647,858 		JBrowse link
G Bcl6 BCL6 transcription repressor enables ISO (PMID:10490661), (PMID:15611242), (PMID:9110977) MGI PMID:9110977 PMID:10490661 PMID:15611242 NCBI chrNW_004624730:69,145,035...69,167,583
Ensembl chrNW_004624730:69,154,080...69,167,689 		JBrowse link
G Bhlhe40 basic helix-loop-helix family member e40 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:15,413,400...15,418,220
Ensembl chrNW_004624773:15,413,365...15,420,123 		JBrowse link
G Bhlhe41 basic helix-loop-helix family member e41 enables ISO (MGI:5297789|PMID:15147242), (MGI:5297791|PMID:12657651) BHF-UCL PMID:12657651 PMID:15147242 MGI:5297789 MGI:5297791 NCBI chrNW_004624752:13,000,238...13,004,777
Ensembl chrNW_004624752:13,000,525...13,003,079 		JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:5,295,120...5,391,645
Ensembl chrNW_004624766:5,317,635...5,391,645 		JBrowse link
G Bptf bromodomain PHD finger transcription factor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624870:489,359...626,677
Ensembl chrNW_004624870:487,955...626,683 		JBrowse link
G Bsx brain specific homeobox enables ISO (MGI:3713592|PMID:17353277)
(PMID:17353277)		 NTNU_SB PMID:17353277 MGI:3713592 NCBI chrNW_004624880:2,128,744...2,137,465
Ensembl chrNW_004624880:2,131,722...2,135,685 		JBrowse link
G Calcoco1 calcium binding and coiled-coil domain 1 enables ISO (PMID:24245781) UniProt PMID:24245781 NCBI chrNW_004624904:1,792,861...1,809,265
Ensembl chrNW_004624904:1,790,587...1,809,277 		JBrowse link
G Carf calcium responsive transcription factor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:13,370,578...13,504,485
Ensembl chrNW_004624765:13,431,825...13,466,969 		JBrowse link
G Cc2d1a coiled-coil and C2 domain containing 1A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624901:1,188,687...1,204,627
Ensembl chrNW_004624901:1,188,986...1,205,511 		JBrowse link
G Cc2d1b coiled-coil and C2 domain containing 1B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624859:865,270...900,288
Ensembl chrNW_004624859:866,824...877,264 		JBrowse link
G Ccar1 cell division cycle and apoptosis regulator 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624754:2,981,845...3,035,304
Ensembl chrNW_004624754:2,981,661...3,033,411 		JBrowse link
G Cdk9 cyclin dependent kinase 9 enables ISO (PMID:21245044) MGI PMID:21245044 NCBI chrNW_004624760:7,760,474...7,765,711 JBrowse link
G Cdx1 caudal type homeobox 1 enables ISO (PMID:15774940) NTNU_SB PMID:15774940 NCBI chrNW_004624774:9,479,173...9,494,962
Ensembl chrNW_004624774:9,479,255...9,494,061 		JBrowse link
G Cdx2 caudal type homeobox 2 enables ISO (PMID:15677472)
(PMID:9512360), (PMID:9933478)
(MGI:6695858|PMID:9933478), (MGI:6695963|PMID:9512360)		 NTNU_SB
UniProt		 PMID:9512360 PMID:9933478 PMID:15677472 MGI:6695858 MGI:6695963 NCBI chrNW_004624776:10,551,503...10,556,987
Ensembl chrNW_004624776:10,551,503...10,556,845 		JBrowse link
G Cebpa CCAAT enhancer binding protein alpha enables ISO (MGI:5572903|PMID:10233885)
PMID:8572170		 NTNU_SB PMID:8572170 PMID:10233885 MGI:5572903 RGD:8661634 NCBI chrNW_004624794:9,809,007...9,813,418 JBrowse link
G Cebpb CCAAT enhancer binding protein beta enables
contributes_to		 ISO PMID:8572170
(PMID:27812542)		 NTNU_SB
MGI		 PMID:8572170 PMID:27812542 RGD:8661634 NCBI chrNW_004624790:5,367,808...5,369,686
Ensembl chrNW_004624790:5,368,349...5,369,377 		JBrowse link
G Cebpd CCAAT enhancer binding protein delta enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:7,721,564...7,722,823
Ensembl chrNW_004624735:7,721,633...7,722,445 		JBrowse link
G Cebpe CCAAT enhancer binding protein epsilon enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624820:9,423,725...9,425,338
Ensembl chrNW_004624820:9,423,725...9,425,338 		JBrowse link
G Cebpg CCAAT enhancer binding protein gamma enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:9,727,616...9,736,729
Ensembl chrNW_004624794:9,729,876...9,736,516 		JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 enables ISO (MGI:5532896|PMID:22569126)
(PMID:22569126)		 UniProt PMID:22569126 MGI:5532896 NCBI chrNW_004624768:10,786,139...10,922,558
Ensembl chrNW_004624768:10,785,815...10,922,790 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 enables ISO (PMID:23319608) MGI PMID:23319608 NCBI chrNW_004624744:31,103,053...31,302,314
Ensembl chrNW_004624744:31,103,059...31,235,623 		JBrowse link
G Ciart circadian associated repressor of transcription enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:18,036,407...18,040,571
Ensembl chrNW_004624772:18,037,066...18,040,692 		JBrowse link
G Clock clock circadian regulator enables ISO (MGI:3843127|PMID:19299583), (MGI:5292598|PMID:21768648), (MGI:5297789|PMID:15147242), (MGI:5511073|PMID:24043798), (MGI:5545849|PMID:24385426), (MGI:5574290|PMID:22894897), (MGI:5582861|PMID:24089055), (MGI:5607228|PMID:21113167), (MGI:5613453|PMID:24051492)
(PMID:15147242), (PMID:19299583), (PMID:21113167), (PMID:21768648), (PMID:22894897), (PMID:24043798), (PMID:24051492), (PMID:24089055), (PMID:24385426)
(PMID:18411297)		 UniProt
BHF-UCL		 PMID:15147242 PMID:18411297 PMID:19299583 PMID:21113167 PMID:21768648 More... MGI:3843127 MGI:5292598 MGI:5297789 MGI:5511073 MGI:5545849 MGI:5574290 MGI:5582861 MGI:5607228 MGI:5613453 NCBI chrNW_004624761:13,915,277...14,038,596
Ensembl chrNW_004624761:13,916,653...14,036,164 		JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables ISO (PMID:19861239), (PMID:9065434) NTNU_SB PMID:9065434 PMID:19861239 NCBI chrNW_004624765:8,374,160...8,436,969 JBrowse link
G Creb3 cAMP responsive element binding protein 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624868:5,056,415...5,061,234
Ensembl chrNW_004624868:5,056,691...5,060,669 		JBrowse link
G Creb3l2 cAMP responsive element binding protein 3 like 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624765:18,152,099...18,275,614
Ensembl chrNW_004624765:18,157,132...18,276,029 		JBrowse link
G Creb3l3 cAMP responsive element binding protein 3 like 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:5,450,265...5,468,079 JBrowse link
G Creb3l4 cAMP responsive element binding protein 3 like 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:3,249,747...3,255,210
Ensembl chrNW_004624885:3,250,116...3,254,634 		JBrowse link
G Crem cAMP responsive element modulator enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624805:6,890,484...6,992,469
Ensembl chrNW_004624805:6,923,557...6,992,450 		JBrowse link
G Crx cone-rod homeobox enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:6,103,530...6,108,129
Ensembl chrNW_004624832:6,104,229...6,108,146 		JBrowse link
G Ctcf CCCTC-binding factor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624746:18,705,017...18,760,345
Ensembl chrNW_004624746:18,706,663...18,760,203 		JBrowse link
G Ctcfl CCCTC-binding factor like enables ISO (PMID:16140944) NTNU_SB PMID:16140944 NCBI chrNW_004624741:23,924,124...23,948,849
Ensembl chrNW_004624741:23,925,326...23,948,819 		JBrowse link
G Cux1 cut like homeobox 1 enables ISO (PMID:18836447) MGI PMID:18836447 NCBI chrNW_004624740:15,289,616...15,664,090
Ensembl chrNW_004624740:15,287,421...15,664,077 		JBrowse link
G Cux2 cut like homeobox 2 enables ISO (MGI:3531237|PMID:15656993)
(PMID:15656993)		 NTNU_SB PMID:15656993 MGI:3531237 NCBI chrNW_004624747:20,784,323...21,021,090 JBrowse link
G Dach1 dachshund family transcription factor 1 enables ISO (PMID:20956529) BHF-UCL PMID:20956529 NCBI chrNW_004624751:28,702,797...29,080,751
Ensembl chrNW_004624751:28,703,108...29,080,750 		JBrowse link
G Ddit3 DNA damage inducible transcript 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:10,437,998...10,443,278 JBrowse link
G Ddn dendrin enables ISO PMID:21911934 MGI PMID:21911934 RGD:8554331 NCBI chrNW_004624816:3,188,765...3,192,905
Ensembl chrNW_004624816:3,188,702...3,191,309 		JBrowse link
G Dhx36 DEAH-box helicase 36 enables ISO (PMID:21586581), (PMID:21993297)
(PMID:25611385)
(MGI:6201778|PMID:25611385)		 UniProt PMID:21586581 PMID:21993297 PMID:25611385 MGI:6201778 NCBI chrNW_004624730:31,857,157...31,913,985
Ensembl chrNW_004624730:31,855,992...31,914,253 		JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO (PMID:11038348) UniProt PMID:11038348 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075 		JBrowse link
G Dlx1 distal-less homeobox 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624787:9,514,170...9,519,309
Ensembl chrNW_004624787:9,514,573...9,519,724 		JBrowse link
G Dlx3 distal-less homeobox 3 enables ISO (PMID:18684741) MGI PMID:18684741 NCBI chrNW_004624795:6,014,044...6,018,819
Ensembl chrNW_004624795:6,015,523...6,018,684 		JBrowse link
G Dlx4 distal-less homeobox 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:5,995,364...6,000,472
Ensembl chrNW_004624795:5,995,085...6,000,566 		JBrowse link
G Dlx5 distal-less homeobox 5 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624813:3,760,890...3,765,309
Ensembl chrNW_004624813:3,760,661...3,765,517 		JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:5,525,417...5,641,612
Ensembl chrNW_004624736:5,525,408...5,645,636 		JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:5,721,984...5,730,558
Ensembl chrNW_004624736:5,722,404...5,730,633 		JBrowse link
G Dmrta1 DMRT like family A1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:26,309,929...26,318,249
Ensembl chrNW_004624736:26,309,744...26,318,326 		JBrowse link
G Dmrtc2 DMRT like family C2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:825,010...830,770
Ensembl chrNW_004624907:825,041...830,705 		JBrowse link
G Dmtf1 cyclin D binding myb like transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:34,594,204...34,635,809
Ensembl chrNW_004624739:34,596,960...34,635,809 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha enables ISO (PMID:19786833), (PMID:23042785) BHF-UCL PMID:19786833 PMID:23042785 NCBI chrNW_004624738:7,481,084...7,581,332
Ensembl chrNW_004624738:7,485,842...7,581,056 		JBrowse link
G E2f1 E2F transcription factor 1 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624842:5,602,432...5,612,951
Ensembl chrNW_004624842:5,602,432...5,612,951 		JBrowse link
G E2f2 E2F transcription factor 2 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624764:8,132,283...8,158,190
Ensembl chrNW_004624764:8,135,470...8,157,731 		JBrowse link
G E2f3 E2F transcription factor 3 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624756:6,182,087...6,266,097
Ensembl chrNW_004624756:6,185,366...6,266,000 		JBrowse link
G E2f4 E2F transcription factor 4 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624746:19,117,582...19,124,261
Ensembl chrNW_004624746:19,118,393...19,124,196 		JBrowse link
G E2f7 E2F transcription factor 7 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624750:21,010,347...21,063,655
Ensembl chrNW_004624750:21,010,339...21,063,757 		JBrowse link
G E2f8 E2F transcription factor 8 enables IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624766:10,652,749...10,670,886
Ensembl chrNW_004624766:10,652,745...10,669,909 		JBrowse link
G Ebf1 EBF transcription factor 1 enables ISO (MGI:5572892|PMID:12446773), (PMID:22194471) MGI PMID:12446773 PMID:22194471 MGI:5572892 NCBI chrNW_004624733:30,327,541...30,735,432
Ensembl chrNW_004624733:30,333,504...30,733,267 		JBrowse link
G Ebf2 EBF transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:20,791,824...20,989,836
Ensembl chrNW_004624758:20,794,698...20,989,306 		JBrowse link
G Ebf3 EBF transcription factor 3 enables ISO (MGI:2384470|PMID:12139918)
(PMID:12139918)		 NTNU_SB PMID:12139918 MGI:2384470 NCBI chrNW_004624737:17,069,676...17,201,481
Ensembl chrNW_004624737:17,078,683...17,201,536 		JBrowse link
G Ebf4 EBF family member 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:3,834,175...3,892,347
Ensembl chrNW_004624741:3,834,151...3,892,353 		JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta enables ISO (PMID:21597468) UniProt PMID:21597468 NCBI chrNW_004624735:13,148,640...13,165,259
Ensembl chrNW_004624735:13,154,327...13,173,477 		JBrowse link
G Egr1 early growth response 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:31,247,855...31,251,675
Ensembl chrNW_004624743:31,247,516...31,252,205 		JBrowse link
G Egr2 early growth response 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624791:953,009...959,656
Ensembl chrNW_004624791:955,161...959,791 		JBrowse link
G Egr3 early growth response 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:18,180,787...18,186,148
Ensembl chrNW_004624758:18,180,123...18,186,196 		JBrowse link
G Ehf ETS homologous factor enables ISO (PMID:17027647) NTNU_SB PMID:17027647 NCBI chrNW_004624767:12,484,558...12,538,175
Ensembl chrNW_004624767:12,484,313...12,538,162 		JBrowse link
G Elf1 E74 like ETS transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624748:13,987,001...14,090,451
Ensembl chrNW_004624748:14,017,621...14,091,619 		JBrowse link
G Elf3 E74 like ETS transcription factor 3 enables ISO (MGI:2179629|PMID:11893733)
(PMID:11893733)		 NTNU_SB PMID:11893733 MGI:2179629 NCBI chrNW_004624807:8,719,835...8,725,911 JBrowse link
G Elf4 E74 like ETS transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624797:9,285,586...9,330,291
Ensembl chrNW_004624797:9,286,173...9,330,381 		JBrowse link
G Elk1 ETS transcription factor ELK1 enables ISO (PMID:12750007) NTNU_SB
RGD		 PMID:11557580 PMID:12750007 RGD:628487 NCBI chrNW_004624978:194,985...208,105
Ensembl chrNW_004624978:194,992...208,103 		JBrowse link
G Elk3 ETS transcription factor ELK3 enables ISO (PMID:12788937) NTNU_SB PMID:12788937 NCBI chrNW_004624750:11,059,604...11,114,878
Ensembl chrNW_004624750:11,059,226...11,114,923 		JBrowse link
G Elk4 ETS transcription factor ELK4 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624807:5,603,815...5,620,856
Ensembl chrNW_004624807:5,604,183...5,617,319 		JBrowse link
G Emx1 empty spiracles homeobox 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624762:685,331...702,040
Ensembl chrNW_004624762:681,308...701,998 		JBrowse link
G En1 engrailed homeobox 1 enables ISO (PMID:21672318) NTNU_SB PMID:21672318 NCBI chrNW_004624732:26,333,642...26,338,450
Ensembl chrNW_004624732:26,333,653...26,337,904 		JBrowse link
G Eomes eomesodermin enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624788:5,550,569...5,557,342
Ensembl chrNW_004624788:5,550,445...5,557,321 		JBrowse link
G Epas1 endothelial PAS domain protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:27,747,770...27,831,213
Ensembl chrNW_004624738:27,747,696...27,834,054 		JBrowse link
G Erg ETS transcription factor ERG enables ISO (PMID:23093599) NTNU_SB PMID:23093599 NCBI chrNW_004624745:25,239,356...25,457,533
Ensembl chrNW_004624745:25,294,832...25,459,683 		JBrowse link
G Esr1 estrogen receptor 1 enables ISO (PMID:12047722), (PMID:15345745) UniProt PMID:12047722 PMID:15345745 NCBI chrNW_004624785:6,164,507...6,601,302
Ensembl chrNW_004624785:6,164,379...6,601,326 		JBrowse link
G Esr2 estrogen receptor 2 enables ISO (PMID:15345745)
PMID:12047722		 UniProt
NTNU_SB		 PMID:12047722 PMID:15345745 RGD:8661629 NCBI chrNW_004624734:36,742,913...36,862,993
Ensembl chrNW_004624734:36,759,104...36,825,295 		JBrowse link
G Esrra estrogen related receptor alpha enables ISO (PMID:18234909) MGI PMID:18234909 NCBI chrNW_004624767:21,999,932...22,007,582
Ensembl chrNW_004624767:21,999,932...22,009,485 		JBrowse link
G Esrrb estrogen related receptor beta enables ISO (MGI:3813404|PMID:18662995)
(PMID:18662995)
(PMID:27723719)
(MGI:5823092|PMID:27723719)		 BHF-UCL
UniProt		 PMID:18662995 PMID:27723719 MGI:3813404 MGI:5823092 NCBI chrNW_004624734:25,261,493...25,369,092
Ensembl chrNW_004624734:25,261,493...25,430,045 		JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor enables ISO (PMID:12119294) NTNU_SB PMID:12119294 NCBI chrNW_004624812:2,795,961...2,920,263
Ensembl chrNW_004624812:2,795,686...2,920,274 		JBrowse link
G Ets2 ETS proto-oncogene 2, transcription factor enables ISO (PMID:12637547) NTNU_SB PMID:12637547 NCBI chrNW_004624745:25,096,587...25,113,953
Ensembl chrNW_004624745:25,096,337...25,110,123 		JBrowse link
G Etv1 ETS variant transcription factor 1 enables ISO (PMID:12750007) NTNU_SB PMID:12750007 NCBI chrNW_004624739:15,943,534...16,031,704
Ensembl chrNW_004624739:15,943,495...16,029,785 		JBrowse link
G Etv2 ETS variant transcription factor 2 enables ISO (MGI:5572895|PMID:12087183)
(PMID:12087183)		 NTNU_SB PMID:12087183 MGI:5572895 NCBI chrNW_004624794:7,985,662...7,989,063
Ensembl chrNW_004624794:7,984,884...7,988,296 		JBrowse link
G Etv4 ETS variant transcription factor 4 enables ISO (PMID:14625302) NTNU_SB PMID:14625302 NCBI chrNW_004624795:1,079,024...1,090,364
Ensembl chrNW_004624795:1,079,537...1,089,964 		JBrowse link
G Etv6 ETS variant transcription factor 6 enables ISO (MGI:3721210|PMID:17606295)
(PMID:17606295)		 NTNU_SB PMID:17606295 MGI:3721210 NCBI chrNW_004624752:25,916,942...26,131,380
Ensembl chrNW_004624752:25,913,456...26,131,164 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO (PMID:24137001) MGI PMID:24137001 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196 		JBrowse link
G Fev FEV transcription factor, ETS family member enables ISO PMID:9468386 NTNU_SB PMID:9468386 RGD:633697 NCBI chrNW_004624823:6,032,188...6,036,211
Ensembl chrNW_004624823:6,032,352...6,036,211 		JBrowse link
G Fezf1 FEZ family zinc finger 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624783:13,715,987...13,719,287
Ensembl chrNW_004624783:13,713,422...13,718,604 		JBrowse link
G Fezf2 FEZ family zinc finger 2 enables ISO (PMID:20431123) MGI PMID:20431123 NCBI chrNW_004624888:3,462,132...3,467,701
Ensembl chrNW_004624888:3,462,233...3,468,293 		JBrowse link
G Figla folliculogenesis specific bHLH transcription factor enables ISO (MGI:1326792|PMID:9362457) NTNU_SB PMID:9362457 MGI:1326792 NCBI chrNW_004624762:2,599,627...2,612,921 JBrowse link
G Fli1 Fli-1 proto-oncogene, ETS transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624812:3,004,631...3,138,901
Ensembl chrNW_004624812:3,004,628...3,139,101 		JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624734:26,424,053...26,427,431
Ensembl chrNW_004624734:26,423,079...26,427,732 		JBrowse link
G Fosb FosB proto-oncogene, AP-1 transcription factor subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:2,332,746...2,338,825
Ensembl chrNW_004624907:2,328,691...2,339,099 		JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624767:20,519,054...20,525,311
Ensembl chrNW_004624767:20,519,313...20,524,554 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623 		JBrowse link
G Foxa1 forkhead box A1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624955:234,289...239,541
Ensembl chrNW_004624955:231,506...239,508 		JBrowse link
G Foxa2 forkhead box A2 enables ISO PMID:20735474
(PMID:12488434), (PMID:15485926), (PMID:15987774), (PMID:16912278)
(PMID:12642491)		 BHF-UCL
MGI		 PMID:12488434 PMID:12642491 PMID:15485926 PMID:15987774 PMID:16912278 More... RGD:8553707 NCBI chrNW_004624741:22,645,580...22,649,722
Ensembl chrNW_004624741:22,645,519...22,649,854 		JBrowse link
G Foxa3 forkhead box A3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:7,339,612...7,350,651
Ensembl chrNW_004624832:7,338,478...7,350,658 		JBrowse link
G Foxb1 forkhead box B1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:12,182,728...12,185,228
Ensembl chrNW_004624781:12,183,444...12,185,185 		JBrowse link
G Foxc1 forkhead box C1 enables ISO (MGI:5641778|PMID:25808752)
(PMID:25808752)		 GO_Central PMID:25808752 MGI:5641778 NCBI chrNW_004624756:23,060,065...23,062,407
Ensembl chrNW_004624756:23,060,751...23,062,343 		JBrowse link
G Foxc2 forkhead box C2 enables ISO (PMID:20956529) BHF-UCL PMID:20956529 NCBI chrNW_004624746:2,632,547...2,634,867
Ensembl chrNW_004624746:2,632,619...2,634,085 		JBrowse link
G Foxd1 forkhead box D1 enables ISO (MGI:2675756|PMID:13678594) NTNU_SB PMID:13678594 MGI:2675756 NCBI chrNW_004624905:2,487,981...2,490,068 JBrowse link
G Foxf1 forkhead box F1 enables ISO (PMID:15987774) MGI PMID:15987774 NCBI chrNW_004624746:2,599,211...2,603,031
Ensembl chrNW_004624746:2,599,106...2,603,336 		JBrowse link
G Foxi1 forkhead box I1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624733:19,860,586...19,864,522
Ensembl chrNW_004624733:19,859,972...19,864,359 		JBrowse link
G Foxi2 forkhead box I2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:19,269,071...19,270,718
Ensembl chrNW_004624737:19,269,115...19,270,718 		JBrowse link
G Foxj1 forkhead box J1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624801:6,025,756...6,030,487
Ensembl chrNW_004624801:6,025,793...6,030,486 		JBrowse link
G Foxj2 forkhead box J2 enables ISO (PMID:10777590) NTNU_SB PMID:10777590 NCBI chrNW_004624860:5,176,301...5,195,715
Ensembl chrNW_004624860:5,176,257...5,195,682 		JBrowse link
G Foxj3 forkhead box J3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624892:1,523,554...1,641,330
Ensembl chrNW_004624892:1,523,475...1,641,322 		JBrowse link
G Foxk2 forkhead box K2 enables ISO (PMID:9065434) NTNU_SB PMID:9065434 NCBI chrNW_004624801:11,260,838...11,303,656
Ensembl chrNW_004624801:11,260,836...11,304,773 		JBrowse link
G Foxl2 forkhead box L2 enables ISO (MGI:2675699|PMID:12943993)
(PMID:12943993)		 NTNU_SB PMID:12943993 MGI:2675699 NCBI chrNW_004624730:15,489,261...15,492,645
Ensembl chrNW_004624730:15,490,664...15,491,800 		JBrowse link
G Foxo1 forkhead box O1 enables ISO (MGI:3697295|PMID:17090532) GO_Central PMID:17090532 MGI:3697295 NCBI chrNW_004624748:1,413,754...1,529,646
Ensembl chrNW_004624748:1,413,983...1,529,992 		JBrowse link
G Foxo3 forkhead box O3 enables ISO (MGI:5572869|PMID:17521387)
(PMID:17521387)		 UniProt PMID:17521387 MGI:5572869 NCBI chrNW_004624780:13,621,733...13,740,399
Ensembl chrNW_004624780:13,622,948...13,740,374 		JBrowse link
G Foxo4 forkhead box O4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624903:1,390,899...1,399,745
Ensembl chrNW_004624903:1,391,910...1,399,949 		JBrowse link
G Foxo6 forkhead box O6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624892:621,308...766,187
Ensembl chrNW_004624892:745,410...766,247 		JBrowse link
G Foxp1 forkhead box P1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624773:5,543,529...6,076,522
Ensembl chrNW_004624773:5,543,536...5,883,131 		JBrowse link
G Foxp2 forkhead box P2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624827:4,813,203...5,086,326
Ensembl chrNW_004624827:4,817,092...5,086,488 		JBrowse link
G Foxp3 forkhead box P3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624893:995,145...1,008,492
Ensembl chrNW_004624893:995,182...1,008,679 		JBrowse link
G Foxp4 forkhead box P4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:17,402,788...17,445,469
Ensembl chrNW_004624754:17,404,125...17,428,736 		JBrowse link
G Foxq1 forkhead box Q1 enables ISO (MGI:1891579|PMID:10896677)
(PMID:10896677)		 NTNU_SB PMID:10896677 MGI:1891579 NCBI chrNW_004624756:23,265,721...23,271,954
Ensembl chrNW_004624756:23,269,235...23,271,802 		JBrowse link
G Foxs1 forkhead box S1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:667,610...672,358
Ensembl chrNW_004624741:671,118...672,113 		JBrowse link
G Fubp1 far upstream element binding protein 1 enables ISO (PMID:18836447) MGI PMID:18836447 NCBI chrNW_004624742:19,279,544...19,313,139 JBrowse link
G Gabpa GA binding protein transcription factor subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:13,787,352...13,820,781
Ensembl chrNW_004624745:13,788,288...13,821,599 		JBrowse link
G Gata1 GATA binding protein 1 enables ISO (PMID:15920471), (PMID:24245781)
(PMID:7896801)
(PMID:20133935)		 UniProt
MGI		 PMID:7896801 PMID:15920471 PMID:20133935 PMID:24245781 NCBI chrNW_004624893:595,948...602,980
Ensembl chrNW_004624893:595,967...602,979 		JBrowse link
G Gata2 GATA binding protein 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624961:147,685...155,614
Ensembl chrNW_004624961:143,358...154,003 		JBrowse link
G Gata3 GATA binding protein 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624775:2,985,077...3,014,567
Ensembl chrNW_004624775:2,994,164...3,015,392 		JBrowse link
G Gata4 GATA binding protein 4 enables ISO (PMID:21220346)
(PMID:15539431), (PMID:21029371)
(MGI:5487528|PMID:21029371), (PMID:15539431)		 GO_Central
BHF-UCL		 PMID:15539431 PMID:21029371 PMID:21220346 MGI:5487528 NCBI chrNW_004624758:25,278,878...25,319,317
Ensembl chrNW_004624758:25,278,874...25,319,318 		JBrowse link
G Gata5 GATA binding protein 5 enables ISO (PMID:15987774) MGI PMID:15987774 NCBI chrNW_004624741:28,310,679...28,322,209
Ensembl chrNW_004624741:28,310,201...28,321,095 		JBrowse link
G Gata6 GATA binding protein 6 enables ISO (PMID:15987774), (PMID:16199866), (PMID:16621466), (PMID:21350014) MGI PMID:15987774 PMID:16199866 PMID:16621466 PMID:21350014 NCBI chrNW_004624770:9,772,818...9,799,837
Ensembl chrNW_004624770:9,772,818...9,798,259 		JBrowse link
G Gcm1 glial cells missing transcription factor 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624850:405,001...421,208
Ensembl chrNW_004624850:406,840...421,128 		JBrowse link
G Gcm2 glial cells missing transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:15,087,045...15,095,049
Ensembl chrNW_004624756:15,090,428...15,095,121 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:5,260,651...5,271,908
Ensembl chrNW_004624742:5,261,537...5,270,695 		JBrowse link
G Gli1 GLI family zinc finger 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:10,483,279...10,494,539
Ensembl chrNW_004624802:10,483,219...10,498,609 		JBrowse link
G Gli2 GLI family zinc finger 2 enables ISO (PMID:15614767), (PMID:16880529) MGI PMID:15614767 PMID:16880529 NCBI chrNW_004624732:24,159,407...24,381,495
Ensembl chrNW_004624732:24,159,312...24,328,452 		JBrowse link
G Gli3 GLI family zinc finger 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:18,961,395...19,238,760
Ensembl chrNW_004624740:18,975,596...19,235,900 		JBrowse link
G Gli4 GLI family zinc finger 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:13,459,082...13,469,288
Ensembl chrNW_004624735:13,455,746...13,464,627 		JBrowse link
G Glis1 GLIS family zinc finger 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624934:750,523...950,446
Ensembl chrNW_004624934:862,100...950,162 		JBrowse link
G Glis2 GLIS family zinc finger 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624824:2,106,261...2,127,740
Ensembl chrNW_004624824:2,098,384...2,127,733 		JBrowse link
G Glis3 GLIS family zinc finger 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:8,552,143...9,030,122
Ensembl chrNW_004624736:8,555,916...9,004,996 		JBrowse link
G Gmeb1 glucocorticoid modulatory element binding protein 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624764:12,473,696...12,515,592
Ensembl chrNW_004624764:12,474,054...12,517,848 		JBrowse link
G Gmeb2 glucocorticoid modulatory element binding protein 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:29,241,820...29,281,551
Ensembl chrNW_004624741:29,241,710...29,281,516 		JBrowse link
G Grhl1 grainyhead like transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624865:5,046,030...5,078,545
Ensembl chrNW_004624865:5,046,147...5,078,492 		JBrowse link
G Grhl2 grainyhead like transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624763:18,784,815...18,916,358
Ensembl chrNW_004624763:18,784,187...18,916,358 		JBrowse link
G Grhl3 grainyhead like transcription factor 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:8,753,343...8,783,891
Ensembl chrNW_004624764:8,753,567...8,783,162 		JBrowse link
G Gsc goosecoid homeobox enables ISO (MGI:1101650|PMID:9417125)
(PMID:9417125)		 NTNU_SB PMID:9417125 MGI:1101650 NCBI chrNW_004624734:7,367,030...7,369,081
Ensembl chrNW_004624734:7,367,277...7,368,817 		JBrowse link
G Gsx1 GS homeobox 1 enables ISO (MGI:2153930|PMID:11731616)
(PMID:11731616)		 NTNU_SB PMID:11731616 MGI:2153930 NCBI chrNW_004624776:10,704,726...10,707,108
Ensembl chrNW_004624776:10,705,843...10,707,093 		JBrowse link
G Gtf2ird1 GTF2I repeat domain containing 1 enables ISO (PMID:9774679) ARUK-UCL PMID:9774679 NCBI chrNW_004624740:13,581,752...13,653,148
Ensembl chrNW_004624740:13,579,292...13,652,402 		JBrowse link
G Gzf1 GDNF inducible zinc finger protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:23,035,592...23,044,071
Ensembl chrNW_004624741:23,035,577...23,046,188 		JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 enables ISO (PMID:11802795) NTNU_SB PMID:11802795 NCBI chrNW_004624733:34,731,671...34,733,759
Ensembl chrNW_004624733:34,731,671...34,733,759 		JBrowse link
G Hbp1 HMG-box transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:22,504,766...22,531,718
Ensembl chrNW_004624739:22,504,235...22,531,595 		JBrowse link
G Hcfc1 host cell factor C1 enables ISO (PMID:18836447) MGI PMID:18836447 NCBI chrNW_004624946:571,776...591,543
Ensembl chrNW_004624946:571,774...590,247 		JBrowse link
G Hdac1 histone deacetylase 1 enables ISO (PMID:18974119) UniProt PMID:18974119 NCBI chrNW_004624764:15,510,655...15,552,020
Ensembl chrNW_004624764:15,510,866...15,552,025 		JBrowse link
G Hdac2 histone deacetylase 2 enables ISO (MGI:5817507|PMID:28053041), (PMID:24137001)
(PMID:24137001), (PMID:28053041)		 MGI
UniProt		 PMID:24137001 PMID:28053041 MGI:5817507 NCBI chrNW_004624856:4,834,197...4,861,546
Ensembl chrNW_004624856:4,834,217...4,861,592 		JBrowse link
G Hdac4 histone deacetylase 4 enables ISO (PMID:24413532) UniProt PMID:24413532 NCBI chrNW_004624847:3,846,196...4,101,537
Ensembl chrNW_004624847:3,845,858...4,101,487 		JBrowse link
G Hdac5 histone deacetylase 5 enables ISO (PMID:24413532)
(PMID:20181743)
(MGI:4440396|PMID:20181743)		 UniProt PMID:20181743 PMID:24413532 MGI:4440396 NCBI chrNW_004624795:814,134...838,031
Ensembl chrNW_004624795:818,154...837,961 		JBrowse link
G Hdac6 histone deacetylase 6 enables ISO (PMID:24413532) UniProt PMID:24413532 NCBI chrNW_004624893:608,744...627,600
Ensembl chrNW_004624893:608,540...628,580 		JBrowse link
G Hdgf heparin binding growth factor enables ISO PMID:19162039 NTNU_SB PMID:19162039 RGD:8554761 NCBI chrNW_004624885:1,900,835...1,910,886 JBrowse link
G Helt helt bHLH transcription factor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624769:15,851,432...15,854,088
Ensembl chrNW_004624769:15,852,025...15,856,041 		JBrowse link
G Hes2 hes family bHLH transcription factor 2 enables ISO PMID:8354270 NTNU_SB PMID:8354270 RGD:61626 NCBI chrNW_004624818:5,045,170...5,047,998 JBrowse link
G Hes3 hes family bHLH transcription factor 3 enables ISO (MGI:1928504|PMID:10858455) NTNU_SB PMID:10858455 MGI:1928504 NCBI chrNW_004624818:5,156,428...5,160,858
Ensembl chrNW_004624818:5,153,717...5,161,026 		JBrowse link
G Hesx1 HESX homeobox 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624822:74,344...102,484
Ensembl chrNW_004624822:74,373...101,828 		JBrowse link
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624744:11,462,865...11,466,559
Ensembl chrNW_004624744:11,462,847...11,467,870 		JBrowse link
G Heyl hes related family bHLH transcription factor with YRPW motif like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:22,118,995...22,135,280
Ensembl chrNW_004624764:22,122,079...22,135,252 		JBrowse link
G Hhex hematopoietically expressed homeobox enables ISO (PMID:15016828) NTNU_SB PMID:15016828 NCBI chrNW_004624737:3,897,907...3,903,828
Ensembl chrNW_004624737:3,897,871...3,904,083 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha enables ISO (MGI:6430928|PMID:25587068)
(PMID:9113979)
(PMID:33108349)		 BHF-UCL
MGI		 PMID:9113979 PMID:25587068 PMID:33108349 MGI:6430928 NCBI chrNW_004624734:39,414,458...39,471,705
Ensembl chrNW_004624734:39,411,824...39,471,705 		JBrowse link
G Hif3a hypoxia inducible factor 3 subunit alpha enables ISO (PMID:31768607) ARUK-UCL PMID:31768607 NCBI chrNW_004624832:7,128,285...7,157,506
Ensembl chrNW_004624832:7,128,285...7,157,494 		JBrowse link
G Hinfp histone H4 transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:14,502,600...14,514,012
Ensembl chrNW_004624784:14,502,554...14,513,567 		JBrowse link
G Hivep1 HIVEP zinc finger 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:13,968,588...14,094,716
Ensembl chrNW_004624756:13,968,483...14,094,872 		JBrowse link
G Hivep2 HIVEP zinc finger 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:11,263,701...11,446,887
Ensembl chrNW_004624753:11,383,280...11,447,934 		JBrowse link
G Hivep3 HIVEP zinc finger 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624892:898,986...1,365,701
Ensembl chrNW_004624892:897,485...987,575 		JBrowse link
G Hlf HLF transcription factor, PAR bZIP family member enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:10,520,106...10,573,206
Ensembl chrNW_004624795:10,520,044...10,573,328 		JBrowse link
G Hmga1 high mobility group AT-hook 1 enables ISO (MGI:5644022|PMID:19389484), (PMID:22207709)
(PMID:19389484), (PMID:22207709)		 MGI
ARUK-UCL		 PMID:19389484 PMID:22207709 MGI:5644022 NCBI chrNW_004624754:22,888,052...22,900,685
Ensembl chrNW_004624754:22,892,226...22,898,807 		JBrowse link
G Hnf1a HNF1 homeobox A enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:12,717,713...12,746,040
Ensembl chrNW_004624747:12,717,707...12,746,724 		JBrowse link
G Hnf1b HNF1 homeobox B enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624871:4,662,104...4,713,125
Ensembl chrNW_004624871:4,661,669...4,712,960 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha enables IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624790:10,039,344...10,065,167
Ensembl chrNW_004624790:10,038,999...10,100,649 		JBrowse link
G Hnf4g hepatocyte nuclear factor 4 gamma enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624744:15,648,463...15,797,403
Ensembl chrNW_004624744:15,648,466...15,683,973 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U enables ISO (MGI:3794926|PMID:18332112)
(PMID:18332112)		 UniProt PMID:18332112 MGI:3794926 NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832 		JBrowse link
G Hoxa1 homeobox A1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:3,509,020...3,511,890
Ensembl chrNW_004624739:3,508,838...3,511,864 		JBrowse link
G Hoxa10 homeobox A10 enables ISO (PMID:21471217) NTNU_SB PMID:21471217 NCBI chrNW_004624739:3,425,468...3,435,218
Ensembl chrNW_004624739:3,425,468...3,433,967 		JBrowse link
G Hoxa13 homeobox A13 enables ISO (MGI:5572825|PMID:15342482)
(PMID:15342482)		 NTNU_SB PMID:15342482 MGI:5572825 NCBI chrNW_004624739:3,405,860...3,410,426
Ensembl chrNW_004624739:3,406,436...3,410,851 		JBrowse link
G Hoxa2 homeobox A2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:3,501,671...3,504,939
Ensembl chrNW_004624739:3,501,817...3,504,750 		JBrowse link
G Hoxa3 homeobox A3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:3,453,358...3,498,061
Ensembl chrNW_004624739:3,478,406...3,498,333 		JBrowse link
G Hoxa5 homeobox A5 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624739:3,461,779...3,464,543
Ensembl chrNW_004624739:3,461,800...3,464,785 		JBrowse link
G Hoxa6 homeobox A6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:3,455,513...3,460,130
Ensembl chrNW_004624739:3,455,606...3,460,102 		JBrowse link
G Hoxa7 homeobox A7 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:3,448,982...3,451,985
Ensembl chrNW_004624739:3,448,199...3,452,717 		JBrowse link
G Hoxa9 homeobox A9 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624739:3,440,328...3,443,362
Ensembl chrNW_004624739:3,439,217...3,443,449 		JBrowse link
G Hoxb1 homeobox B1 enables
contributes_to		 IEA
ISO		 (PMID:9242495) Ensembl
TreeGrafter
MGI		 PMID:9242495 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624795:5,032,495...5,033,789
Ensembl chrNW_004624795:5,032,495...5,033,789 		JBrowse link
G Hoxb13 homeobox B13 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:5,198,805...5,201,079
Ensembl chrNW_004624795:5,198,751...5,200,961 		JBrowse link
G Hoxb3 homeobox B3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:5,050,272...5,072,614
Ensembl chrNW_004624795:5,048,920...5,068,708 		JBrowse link
G Hoxb5 homeobox B5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:5,089,259...5,092,770
Ensembl chrNW_004624795:5,089,323...5,092,764 		JBrowse link
G Hoxb6 homeobox B6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:5,093,911...5,102,401
Ensembl chrNW_004624795:5,093,858...5,102,868 		JBrowse link
G Hoxb7 homeobox B7 enables ISO (PMID:8756643) NTNU_SB PMID:8756643 NCBI chrNW_004624795:5,105,032...5,109,379
Ensembl chrNW_004624795:5,105,622...5,108,367 		JBrowse link
G Hoxc10 homeobox C10 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624904:2,040,018...2,044,881
Ensembl chrNW_004624904:2,039,754...2,045,096 		JBrowse link
G Hoxc11 homeobox C11 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624904:2,027,792...2,030,148
Ensembl chrNW_004624904:2,027,993...2,030,148 		JBrowse link
G Hoxc4 homeobox C4 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624904:2,104,504...2,109,729
Ensembl chrNW_004624904:2,092,055...2,109,979 		JBrowse link
G Hoxc5 homeobox C5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624904:2,086,437...2,091,542
Ensembl chrNW_004624904:2,086,531...2,090,428 		JBrowse link
G Hoxc6 homeobox C6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624904:2,071,285...2,084,556
Ensembl chrNW_004624904:2,080,826...2,084,563 		JBrowse link
G Hoxc9 homeobox C9 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624904:2,054,768...2,058,556
Ensembl chrNW_004624904:2,054,386...2,058,539 		JBrowse link
G Hoxd10 homeobox D10 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624787:13,256,600...13,260,664
Ensembl chrNW_004624787:13,257,387...13,262,685 		JBrowse link
G Hoxd13 homeobox D13 enables ISO (MGI:3620476|PMID:16314414)
(PMID:16314414)		 NTNU_SB PMID:16314414 MGI:3620476 NCBI chrNW_004624787:13,233,932...13,237,210
Ensembl chrNW_004624787:13,233,932...13,238,503 		JBrowse link
G Hoxd3 homeobox D3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624787:13,308,406...13,312,770
Ensembl chrNW_004624787:13,292,936...13,314,622 		JBrowse link
G Hsf1 heat shock transcription factor 1 enables ISO (PMID:8926278), (PMID:8972228)
(PMID:18434628)		 NTNU_SB
MGI		 PMID:8926278 PMID:8972228 PMID:18434628 NCBI chrNW_004624735:12,536,818...12,562,643
Ensembl chrNW_004624735:12,537,128...12,562,644 		JBrowse link
G Hsf2 heat shock transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004624798:8,646,936...8,674,181
Ensembl chrNW_004624798:8,647,893...8,674,082 		JBrowse link
G Ikzf1 IKAROS family zinc finger 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:3,785,342...3,875,892
Ensembl chrNW_004624740:3,785,209...3,875,841 		JBrowse link
G Ikzf2 IKAROS family zinc finger 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624765:3,016,569...3,171,443
Ensembl chrNW_004624765:3,017,571...3,164,136 		JBrowse link
G Ikzf3 IKAROS family zinc finger 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:3,222,170...3,347,079
Ensembl chrNW_004624795:3,290,078...3,345,533 		JBrowse link
G Ikzf4 IKAROS family zinc finger 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:12,008,096...12,023,142
Ensembl chrNW_004624802:12,007,506...12,023,121 		JBrowse link
G Ikzf5 IKAROS family zinc finger 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624737:23,999,688...24,016,903 JBrowse link
G Insm1 INSM transcriptional repressor 1 enables ISO (PMID:11842116), (PMID:16569215), (PMID:18417529) UniProt PMID:11842116 PMID:16569215 PMID:18417529 NCBI chrNW_004624741:20,862,835...20,866,176
Ensembl chrNW_004624741:20,863,088...20,864,584 		JBrowse link
G Irf1 interferon regulatory factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:39,596,565...39,603,428
Ensembl chrNW_004624733:39,596,501...39,603,526 		JBrowse link
G Irf2 interferon regulatory factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624769:15,167,228...15,251,689
Ensembl chrNW_004624769:15,164,744...15,251,745 		JBrowse link
G Irf3 interferon regulatory factor 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Irf4 interferon regulatory factor 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:23,917,111...23,931,482
Ensembl chrNW_004624756:23,918,323...23,931,501 		JBrowse link
G Irf5 interferon regulatory factor 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624783:7,267,680...7,275,918
Ensembl chrNW_004624783:7,260,005...7,274,433 		JBrowse link
G Irf6 interferon regulatory factor 6 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:2,190,721...2,207,183
Ensembl chrNW_004624807:2,193,798...2,206,768 		JBrowse link
G Irf7 interferon regulatory factor 7 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
G Irf8 interferon regulatory factor 8 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:2,272,385...2,290,400
Ensembl chrNW_004624746:2,272,389...2,290,455 		JBrowse link
G Irf9 interferon regulatory factor 9 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624820:8,369,830...8,376,593
Ensembl chrNW_004624820:8,370,289...8,376,950 		JBrowse link
G Irx3 iroquois homeobox 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:2,543,968...2,547,452
Ensembl chrNW_004624757:2,543,992...2,547,464 		JBrowse link
G Irx4 iroquois homeobox 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:913,127...916,583
Ensembl chrNW_004624751:913,691...916,842