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ONTOLOGY REPORT - ANNOTATIONS


Term:transcription cis-regulatory region binding
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Accession:GO:0000976 term browser browse the term
Definition:Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
Comment:Note that this term is meant to also capture non-specific binding to regulatory regions. Also, to minimize ambiguity in the use of the word "promoter" in GO, we have chosen the phrase "transcription regulatory region" to refer to all of the regulatory regions. Regulatory regions in the DNA which control initiation may include the "core promoter" where the basal transcription machinery binds, the "core promoter proximal region" where regulatory factors other than the basal machinery bind. There are also additional regulatory regions, in both the DNA and the RNA transcript, which regulate elongation or termination of transcription.
Synonyms:exact_synonym: transcription regulatory region sequence-specific DNA binding
 narrow_synonym: bacterial-type RNA polymerase regulatory region DNA binding;   bacterial-type RNA polymerase transcription regulatory region sequence-specific DNA binding;   eubacterial-type RNA polymerase regulatory region DNA binding;   eubacterial-type RNA polymerase regulatory region sequence-specific DNA binding
 broad_synonym: regulatory region DNA binding
 related_synonym: transcription regulatory region DNA binding
 alt_id: GO:0000975;   GO:0000984;   GO:0001017;   GO:0044212



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transcription cis-regulatory region binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC catalytic subunit 1 enables IMP (MGI:5494393|PMID:22053081)
(PMID:22053081)
BHF-UCL PMID:22053081 MGI:5494393 NCBI chr 4:126,328,805...126,362,500
Ensembl chr 4:126,328,805...126,362,376
JBrowse link
G Ahr aryl-hydrocarbon receptor enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr12:35,547,978...35,584,988
Ensembl chr12:35,547,973...35,585,037
JBrowse link
G Ahrr aryl-hydrocarbon receptor repressor enables IBA GO_Central GO_REF:0000033 NCBI chr13:74,359,237...74,440,450
Ensembl chr13:74,359,237...74,440,450
JBrowse link
G Ankrd23 ankyrin repeat domain 23 enables IBA GO_Central GO_REF:0000033 NCBI chr 1:36,569,269...36,578,380
Ensembl chr 1:36,569,269...36,575,964
Ensembl chr 1:36,569,269...36,575,964
JBrowse link
G Ar androgen receptor enables ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821
JBrowse link
G Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 enables ISS UniProt GO_REF:0000024 NCBI chr 7:100,997,296...101,061,793
Ensembl chr 7:100,997,274...101,061,793
JBrowse link
G Arid4a AT-rich interaction domain 4A enables IBA GO_Central GO_REF:0000033 NCBI chr12:71,061,314...71,146,125
Ensembl chr12:71,062,764...71,145,366
JBrowse link
G Arid4b AT-rich interaction domain 4B enables IBA GO_Central GO_REF:0000033 NCBI chr13:14,238,334...14,374,188
Ensembl chr13:14,237,817...14,374,188
JBrowse link
G Arid5a AT-rich interaction domain 5A enables IBA GO_Central GO_REF:0000033 NCBI chr 1:36,346,814...36,363,117
Ensembl chr 1:36,346,814...36,363,110
JBrowse link
G Arid5b AT-rich interaction domain 5B enables ISO
ISS
IBA
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:67,928,353...68,114,596
Ensembl chr10:67,928,350...68,114,570
JBrowse link
G Ash2l ASH2 like histone lysine methyltransferase complex subunit enables ISO
IEA
IBA
MGI
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 8:26,306,028...26,337,722
Ensembl chr 8:26,306,024...26,337,722
JBrowse link
G Atf3 activating transcription factor 3 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:190,902,493...190,915,530
Ensembl chr 1:190,902,493...190,950,236
JBrowse link
G Atf4 activating transcription factor 4 contributes_to
enables
ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr15:80,139,385...80,141,746
Ensembl chr15:80,139,385...80,141,742
JBrowse link
G Atf5 activating transcription factor 5 enables ISO
IDA
(PMID:24216764)
(MGI:5688824|PMID:24216764)
MGI
GO_Central
UniProt
PMID:24216764 GO_REF:0000096 MGI:4417868 MGI:5688824 NCBI chr 7:44,461,680...44,466,082
Ensembl chr 7:44,461,680...44,466,082
JBrowse link
G Atf6 activating transcription factor 6 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:170,532,026...170,696,414
Ensembl chr 1:170,532,243...170,695,340
JBrowse link
G Atf6b activating transcription factor 6 beta enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr17:34,866,120...34,874,048
Ensembl chr17:34,866,120...34,874,048
JBrowse link
G Atf7 activating transcription factor 7 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr15:102,434,381...102,533,899
Ensembl chr15:102,434,381...102,533,899
JBrowse link
G Atmin ATM interactor enables IDA
IBA
(MGI:5431042|PMID:22167198)
(PMID:22167198)
UniProt
GO_Central
PMID:22167198 GO_REF:0000033 MGI:5431042 NCBI chr 8:117,670,132...117,687,184
Ensembl chr 8:117,670,132...117,687,184
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 enables IDA
ISO
(MGI:6727566|PMID:33712461)
(PMID:33712461)
UniProt
GO_Central
MGI
PMID:33712461 GO_REF:0000119 MGI:4834177 MGI:6727566 NCBI chr10:62,935,564...62,937,059
Ensembl chr10:62,935,430...62,937,058
JBrowse link
G AW822073 expressed sequence AW822073 enables ISO (PMID:17984056) UniProt PMID:17984056 NCBI chr10:58,058,225...58,060,873
Ensembl chr10:58,058,794...58,060,752
JBrowse link
G Bahd1 bromo adjacent homology domain containing 1 enables IBA GO_Central GO_REF:0000033 NCBI chr 2:118,730,817...118,755,009
Ensembl chr 2:118,730,858...118,755,009
JBrowse link
G Basp1 brain abundant, membrane attached signal protein 1 enables IDA
IBA
(MGI:4418604|PMID:19050011)
(PMID:19050011)
UniProt
GO_Central
PMID:19050011 GO_REF:0000033 MGI:4418604 NCBI chr15:25,363,363...25,413,850
Ensembl chr15:25,363,363...25,413,850
JBrowse link
G Bcor BCL6 interacting corepressor enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr  X:11,902,976...12,026,769
Ensembl chr  X:11,902,979...12,026,594
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables IDA (MGI:5014424|PMID:21680841)
(PMID:21680841)
UniProt PMID:21680841 MGI:5014424 NCBI chr 7:112,777,820...112,913,333
Ensembl chr 7:112,806,672...112,913,333
JBrowse link
G Brca1 breast cancer 1, early onset enables IDA
ISO
(MGI:5009779|PMID:20820192)
(PMID:20820192)
BHF-UCL
GO_Central
MGI
PMID:20820192 GO_REF:0000119 MGI:4834177 MGI:5009779 NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781
JBrowse link
G Brd4 bromodomain containing 4 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr17:32,415,246...32,503,717
Ensembl chr17:32,415,248...32,503,696
JBrowse link
G Brd7 bromodomain containing 7 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 8:89,056,522...89,089,249
Ensembl chr 8:89,057,667...89,088,822
JBrowse link
G Calcoco1 calcium binding and coiled coil domain 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr15:102,615,212...102,630,616
Ensembl chr15:102,615,212...102,630,613
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 enables IMP (MGI:4887324|PMID:18188184)
(PMID:18188184)
UniProt PMID:18188184 MGI:4887324 NCBI chr 9:21,458,163...21,500,763
Ensembl chr 9:21,458,190...21,503,919
JBrowse link
G Cbx3 chromobox 3 enables IDA (MGI:5569417|PMID:24413057)
(PMID:24413057)
UniProt PMID:24413057 MGI:5569417 NCBI chr 6:51,447,596...51,460,684
Ensembl chr 6:51,447,340...51,460,684
JBrowse link
G Cbx4 chromobox 4 enables IDA (PMID:20417598) MGI PMID:20417598 NCBI chr11:118,968,399...118,977,067
Ensembl chr11:118,968,399...118,977,047
JBrowse link
G Ccnt1 cyclin T1 enables IDA (MGI:4834059|PMID:20570862)
(PMID:20570862)
BHF-UCL PMID:20570862 MGI:4834059 NCBI chr15:98,436,570...98,468,340
Ensembl chr15:98,436,570...98,468,804
JBrowse link
G Cdk5rap2 CDK5 regulatory subunit associated protein 2 enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 4:70,135,092...70,328,672
Ensembl chr 4:70,135,093...70,328,680
JBrowse link
G Cdk9 cyclin dependent kinase 9 enables IDA (MGI:4834059|PMID:20570862)
(PMID:20570862)
BHF-UCL PMID:20570862 MGI:4834059 NCBI chr 2:32,595,794...32,608,098
Ensembl chr 2:32,595,796...32,603,088
JBrowse link
G Cdx1 caudal type homeobox 1 enables ISO
ISS
MGI
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr18:61,151,934...61,169,292
Ensembl chr18:61,151,934...61,169,271
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha enables ISO
IDA
(PMID:18632661) MGI
GO_Central
PMID:18632661 GO_REF:0000119 MGI:4834177 NCBI chr 7:34,818,718...34,821,353
Ensembl chr 7:34,818,718...34,821,353
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta enables IDA
ISO
(MGI:5688824|PMID:24216764) UniProt
MGI
PMID:24216764 GO_REF:0000119 MGI:4834177 MGI:5688824 NCBI chr 2:167,530,835...167,532,352
Ensembl chr 2:167,530,835...167,532,338
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta enables IDA (PMID:18632661) MGI PMID:18632661 NCBI chr16:15,705,150...15,707,409
Ensembl chr16:15,705,150...15,708,895
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:69,234,099...69,260,325
Ensembl chr11:69,234,099...69,260,232
JBrowse link
G Ciart circadian associated repressor of transcription enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 3:95,785,812...95,790,012
Ensembl chr 3:95,785,815...95,789,563
JBrowse link
G Ciita class II transactivator enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr16:10,297,877...10,348,928
Ensembl chr16:10,297,923...10,346,282
JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables ISO MGI
GO_Central
RGD
PMID:16382163 PMID:21367864 GO_REF:0000096 MGI:4417868 RGD:10059371 RGD:7247438 NCBI chr 1:64,571,963...64,643,707
Ensembl chr 1:64,571,804...64,643,707
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 enables IDA
ISO
(MGI:5616321|PMID:15665855)
(PMID:15665855)
ParkinsonsUK-UCL
MGI
PMID:15665855 GO_REF:0000096 MGI:4417868 MGI:5616321 NCBI chr 2:91,812,673...91,854,515
Ensembl chr 2:91,812,673...91,854,847
JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 enables IMP
ISO
(MGI:4438315|PMID:19767744)
(PMID:19767744)
UniProt
GO_Central
MGI
PMID:19767744 GO_REF:0000119 MGI:4438315 MGI:4834177 NCBI chr 6:37,307,956...37,419,083
Ensembl chr 6:37,304,190...37,419,081
JBrowse link
G Creb3l3 cAMP responsive element binding protein 3-like 3 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr10:80,920,163...80,934,706
Ensembl chr10:80,920,158...80,934,708
JBrowse link
G Crxos cone-rod homeobox, opposite strand enables IBA GO_Central GO_REF:0000033 NCBI chr 7:15,616,542...15,637,945
Ensembl chr 7:15,616,542...15,637,945
JBrowse link
G Cry2 cryptochrome circadian regulator 2 enables IDA (MGI:5014424|PMID:21680841) UniProt PMID:21680841 MGI:5014424 NCBI chr 2:92,233,991...92,264,426
Ensembl chr 2:92,233,991...92,264,388
JBrowse link
G Ctcf CCCTC-binding factor enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:106,351,135...106,409,554
Ensembl chr 8:106,363,200...106,409,554
JBrowse link
G Ctcfl CCCTC-binding factor like enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:172,935,402...172,961,318
Ensembl chr 2:172,935,402...172,961,318
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 enables IDA
ISO
(MGI:3525819|PMID:15601821)
(PMID:15601821)
ParkinsonsUK-UCL
GO_Central
MGI
PMID:15601821 GO_REF:0000119 MGI:3525819 MGI:4834177 NCBI chr10:127,126,662...127,132,160
Ensembl chr10:127,126,643...127,132,157
Ensembl chr10:127,126,643...127,132,157
JBrowse link
G Dhx36 DEAH-box helicase 36 enables IDA (MGI:5559667|PMID:21590736) UniProt PMID:21590736 MGI:5559667 NCBI chr 3:62,375,436...62,414,464
Ensembl chr 3:62,375,434...62,414,425
JBrowse link
G Dlx2 distal-less homeobox 2 enables IDA (MGI:6874923|PMID:23371388) UniProt PMID:23371388 MGI:6874923 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098
JBrowse link
G Dlx3 distal-less homeobox 3 enables IDA (MGI:6874923|PMID:23371388)
(PMID:23371388)
UniProt PMID:23371388 MGI:6874923 NCBI chr11:95,010,943...95,016,122
Ensembl chr11:95,010,945...95,016,122
JBrowse link
G Dlx5 distal-less homeobox 5 enables IDA
ISO
(MGI:3522068|PMID:15383550)
(PMID:15383550)
UniProt
GO_Central
MGI
PMID:15383550 GO_REF:0000119 MGI:3522068 MGI:4834177 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Duxbl1 double homeobox B-like 1 enables ISO (PMID:17984056) UniProt PMID:17984056 NCBI chr14:25,979,011...25,990,590
Ensembl chr14:25,979,001...25,990,512
JBrowse link
G E2f1 E2F transcription factor 1 enables IDA (PMID:24014029) MGI PMID:24014029 NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812
JBrowse link
G Egr1 early growth response 1 enables IDA
ISO
(MGI:4834991|PMID:18281035)
(PMID:18281035)
BHF-UCL
GO_Central
MGI
PMID:18281035 GO_REF:0000119 MGI:4834177 MGI:4834991 NCBI chr18:34,994,260...34,998,009
Ensembl chr18:34,992,876...34,998,037
JBrowse link
G Egr2 early growth response 2 enables IDA (MGI:3768327|PMID:17938205)
(PMID:17938205)
UniProt PMID:17938205 MGI:3768327 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018
JBrowse link
G Elk1 ELK1, member of ETS oncogene family enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr  X:20,799,634...20,816,847
Ensembl chr  X:20,799,634...20,816,847
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:68,071,063...69,147,756
Ensembl chr 1:68,071,345...69,147,218
JBrowse link
G Ets1 E26 avian leukemia oncogene 1, 5' domain enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:32,547,501...32,669,116
Ensembl chr 9:32,547,517...32,669,116
JBrowse link
G Etv5 ets variant 5 enables ISO
ISS
MGI
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr16:22,200,063...22,258,320
Ensembl chr16:22,200,059...22,258,469
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables ISO MGI
RGD
PMID:22821416 GO_REF:0000096 MGI:4417868 RGD:7242953 NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275
JBrowse link
G Fezf1 Fez family zinc finger 1 enables IDA (MGI:5908758|PMID:28245922)
(PMID:28245922)
UniProt PMID:28245922 MGI:5908758 NCBI chr 6:23,245,043...23,250,942
Ensembl chr 6:23,245,043...23,248,361
JBrowse link
G Fezf2 Fez family zinc finger 2 enables IDA (MGI:5908758|PMID:28245922)
(PMID:28245922)
UniProt PMID:28245922 MGI:5908758 NCBI chr14:10,121,561...10,130,771
Ensembl chr14:10,121,574...10,127,669
JBrowse link
G Fli1 Friend leukemia integration 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 9:32,333,500...32,454,292
Ensembl chr 9:32,333,500...32,454,157
JBrowse link
G Fos FBJ osteosarcoma oncogene enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr12:85,520,664...85,524,048
Ensembl chr12:85,520,664...85,524,047
JBrowse link
G Fosl2 fos-like antigen 2 enables ISO
IDA
(PMID:22326952), (PMID:22990073) MGI
GO_Central
RGD
PMID:21367864 PMID:22326952 PMID:22990073 GO_REF:0000096 MGI:4417868 RGD:7247438 NCBI chr 5:32,292,599...32,315,184
Ensembl chr 5:32,293,145...32,315,186
JBrowse link
G Foxa1 forkhead box A1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr12:57,585,750...57,594,815
Ensembl chr12:57,587,414...57,593,702
JBrowse link
G Foxa2 forkhead box A2 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:147,884,797...147,888,889
Ensembl chr 2:147,884,797...147,888,889
JBrowse link
G Foxa3 forkhead box A3 enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 7:18,747,208...18,757,464
Ensembl chr 7:18,747,209...18,757,463
JBrowse link
G Foxc1 forkhead box C1 enables IDA
ISO
(MGI:3813419|PMID:18579532)
(PMID:18579532)
BHF-UCL
GO_Central
MGI
PMID:18579532 GO_REF:0000119 MGI:3813419 MGI:4834177 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459
JBrowse link
G Foxc2 forkhead box C2 enables IDA (MGI:3813419|PMID:18579532) BHF-UCL PMID:18579532 MGI:3813419 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634
JBrowse link
G Foxd3 forkhead box D3 enables IDA (PMID:7958446) MGI PMID:7958446 NCBI chr 4:99,544,536...99,546,908
Ensembl chr 4:99,544,536...99,546,859
JBrowse link
G Foxf1 forkhead box F1 enables IDA (PMID:17261592), (PMID:7958446) MGI PMID:7958446 PMID:17261592 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883
JBrowse link
G Foxh1 forkhead box H1 enables IDA
IBA
(MGI:1321467|PMID:9858566)
(PMID:9858566)
BHF-UCL
GO_Central
PMID:9858566 GO_REF:0000033 MGI:1321467 NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148
JBrowse link
G Foxi1 forkhead box I1 enables IDA (PMID:7958446) MGI PMID:7958446 NCBI chr11:34,154,341...34,158,089
Ensembl chr11:34,154,338...34,158,089
JBrowse link
G Foxj1 forkhead box J1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:116,221,530...116,226,331
Ensembl chr11:116,221,530...116,226,225
JBrowse link
G Foxk1 forkhead box K1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 5:142,387,252...142,447,770
Ensembl chr 5:142,387,252...142,447,766
JBrowse link
G Foxk2 forkhead box K2 enables ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr11:121,150,805...121,200,726
Ensembl chr11:121,150,816...121,200,722
JBrowse link
G Foxm1 forkhead box M1 enables IDA (PMID:17261592) MGI PMID:17261592 NCBI chr 6:128,339,957...128,352,849
Ensembl chr 6:128,339,930...128,353,109
JBrowse link
G Foxn1 forkhead box N1 enables IBA GO_Central GO_REF:0000033 NCBI chr11:78,248,403...78,277,597
Ensembl chr11:78,248,403...78,277,384
JBrowse link
G Foxo3 forkhead box O3 enables IDA (MGI:4881905|PMID:19933931)
(PMID:19933931)
BHF-UCL PMID:19933931 MGI:4881905 NCBI chr10:42,057,841...42,152,691
Ensembl chr10:42,057,837...42,152,751
JBrowse link
G Foxp1 forkhead box P1 enables ISO MGI
RGD
PMID:21606195 GO_REF:0000096 MGI:4417868 RGD:11561924 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682
JBrowse link
G Gabpa GA repeat binding protein, alpha enables ISO (PMID:9857059) MGI PMID:9857059 NCBI chr16:84,631,795...84,660,671
Ensembl chr16:84,631,813...84,660,667
JBrowse link
G Gabpb1 GA repeat binding protein, beta 1 enables IBA
ISO
(PMID:9857059) GO_Central
MGI
PMID:9857059 GO_REF:0000033 NCBI chr 2:126,470,832...126,527,184
Ensembl chr 2:126,469,362...126,518,257
JBrowse link
G Gabpb2 GA repeat binding protein, beta 2 enables ISO
IBA
(PMID:9857059) MGI
GO_Central
PMID:9857059 GO_REF:0000033 NCBI chr 3:95,089,077...95,125,291
Ensembl chr 3:95,089,077...95,125,227
JBrowse link
G Gata1 GATA binding protein 1 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:7,825,504...7,842,844
Ensembl chr  X:7,825,499...7,844,310
JBrowse link
G Gata3 GATA binding protein 3 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
JBrowse link
G Gata4 GATA binding protein 4 enables ISO (PMID:9566909) MGI
GO_Central
PMID:9566909 GO_REF:0000096 MGI:4417868 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141
JBrowse link
G Gata5 GATA binding protein 5 enables ISO
IDA
(PMID:9566909)
(PMID:9119112)
MGI PMID:9119112 PMID:9566909 NCBI chr 2:179,966,881...179,977,296
Ensembl chr 2:179,966,926...179,976,492
JBrowse link
G Gata6 GATA binding protein 6 enables ISO (PMID:9566909) MGI PMID:9566909 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635
JBrowse link
G Gfi1 growth factor independent 1 transcription repressor enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:107,864,521...107,873,671
Ensembl chr 5:107,864,523...107,873,902
JBrowse link
G Gli1 GLI-Kruppel family member GLI1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr10:127,165,751...127,177,448
Ensembl chr10:127,165,751...127,177,843
JBrowse link
G Gli2 GLI-Kruppel family member GLI2 enables IDA (PMID:19124651) MGI PMID:19124651 NCBI chr 1:118,761,791...118,987,578
Ensembl chr 1:118,761,862...118,981,349
JBrowse link
G Glis2 GLIS family zinc finger 2 enables IDA (MGI:4936785|PMID:21127075)
(PMID:21127075)
BHF-UCL PMID:21127075 MGI:4936785 NCBI chr16:4,412,217...4,443,076
Ensembl chr16:4,412,577...4,442,788
JBrowse link
G Gmnn geminin NOT|enables IDA (MGI:3663964|PMID:16924111)
(PMID:16924111)
UniProt PMID:16924111 MGI:3663964 NCBI chr13:24,935,828...24,954,222
Ensembl chr13:24,935,828...24,945,906
JBrowse link
G Grhl1 grainyhead like transcription factor 1 enables IDA
ISO
(MGI:3778256|PMID:18288204)
(PMID:18288204)
UniProt
GO_Central
MGI
PMID:18288204 GO_REF:0000119 MGI:3778256 MGI:4834177 NCBI chr12:24,622,234...24,667,390
Ensembl chr12:24,622,282...24,667,390
JBrowse link
G Hand1 heart and neural crest derivatives expressed 1 contributes_to ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:57,719,539...57,722,973
Ensembl chr11:57,719,531...57,723,644
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 contributes_to IDA (MGI:4362015|PMID:11812799) BHF-UCL PMID:11812799 MGI:4362015 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668
JBrowse link
G Hdac1 histone deacetylase 1 enables IDA (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506
JBrowse link
G Hdac4 histone deacetylase 4 contributes_to ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 1:91,856,501...92,123,424
Ensembl chr 1:91,856,501...92,123,421
JBrowse link
G Hdac5 histone deacetylase 5 contributes_to ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:102,085,244...102,120,968
Ensembl chr11:102,085,258...102,120,992
JBrowse link
G Hhex hematopoietically expressed homeobox enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr19:37,423,289...37,429,179
Ensembl chr19:37,423,258...37,429,179
JBrowse link
G Hinfp histone H4 transcription factor enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:44,201,509...44,217,003
Ensembl chr 9:44,203,737...44,216,968
JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374
JBrowse link
G Hmgb1 high mobility group box 1 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:148,983,512...148,989,867
Ensembl chr 5:148,983,512...149,121,299
JBrowse link
G Hmgb2 high mobility group box 2 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 8:57,964,877...57,969,033
Ensembl chr 8:57,964,941...57,969,033
JBrowse link
G Hnf1a HNF1 homeobox A enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 5:115,087,039...115,109,121
Ensembl chr 5:115,087,039...115,109,153
JBrowse link
G Hnf1b HNF1 homeobox B enables IDA (PMID:20040500) MGI PMID:20040500 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645
JBrowse link
G Hnf4a hepatic nuclear factor 4, alpha enables IDA
ISO
(MGI:3575336|PMID:15761495)
(PMID:15761495)
BHF-UCL
GO_Central
MGI
PMID:15761495 GO_REF:0000119 MGI:3575336 MGI:4834177 NCBI chr 2:163,348,731...163,414,827
Ensembl chr 2:163,348,728...163,414,830
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 7:28,507,971...28,521,693
Ensembl chr 7:28,507,966...28,521,691
JBrowse link
G Hoxa13 homeobox A13 enables IDA (PMID:18483557) MGI PMID:18483557 NCBI chr 6:52,235,833...52,237,865
Ensembl chr 6:52,234,674...52,237,788
JBrowse link
G Hoxc13 homeobox C13 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr15:102,829,566...102,837,249
Ensembl chr15:102,829,538...102,837,249
JBrowse link
G Hsf1 heat shock factor 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr15:76,361,562...76,385,355
Ensembl chr15:76,361,622...76,386,113
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 enables IDA (MGI:3822269|PMID:18804520), (PMID:7969165) UniProt PMID:7969165 PMID:18804520 MGI:3822269 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926
JBrowse link
G Irf1 interferon regulatory factor 1 enables ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr11:53,660,841...53,669,200
Ensembl chr11:53,660,841...53,669,200
JBrowse link
G Irf2 interferon regulatory factor 2 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 8:47,192,751...47,300,493
Ensembl chr 8:47,192,767...47,300,493
JBrowse link
G Irf4 interferon regulatory factor 4 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:30,933,191...30,950,965
Ensembl chr13:30,933,209...30,950,959
JBrowse link
G Irf5 interferon regulatory factor 5 enables IEA UniProt
InterPro
GO_REF:0000002 MGI:2152098 NCBI chr 6:29,526,129...29,541,874
Ensembl chr 6:29,526,624...29,541,870
JBrowse link
G Irf6 interferon regulatory factor 6 enables IEA UniProt
InterPro
GO_REF:0000002 MGI:2152098 NCBI chr 1:192,835,420...192,854,344
Ensembl chr 1:192,835,419...192,854,331
JBrowse link
G Irf7 interferon regulatory factor 7 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 7:140,843,096...140,846,412
Ensembl chr 7:140,842,619...140,846,394
JBrowse link
G Irf8 interferon regulatory factor 8 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 8:121,463,097...121,483,433
Ensembl chr 8:121,463,097...121,483,433
JBrowse link
G Irf9 interferon regulatory factor 9 enables IEA UniProt
InterPro
GO_REF:0000002 MGI:2152098 NCBI chr14:55,841,442...55,847,487
Ensembl chr14:55,841,028...55,847,487
JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain enables IDA (MGI:7339313|PMID:18539116)
(PMID:18539116)
UniProt PMID:18539116 MGI:7339313 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225
JBrowse link
G Jun jun proto-oncogene enables ISS
ISO
IDA
(MGI:6294187|PMID:22083952)
(PMID:22083952)
(PMID:19303854)
UniProt
GO_Central
MGI
PMID:19303854 PMID:22083952 GO_REF:0000024 GO_REF:0000119 MGI:4834177 MGI:6294187 NCBI chr 4:94,937,273...94,940,459
Ensembl chr 4:94,937,271...94,940,459
JBrowse link
G Jund jun D proto-oncogene enables ISO
IDA
(PMID:22990073) MGI
GO_Central
PMID:22990073 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr 8:71,150,389...71,153,265
Ensembl chr 8:71,151,599...71,153,265
JBrowse link
G Kcnh2 potassium voltage-gated channel, subfamily H (eag-related), member 2 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 5:24,524,583...24,556,671
Ensembl chr 5:24,524,587...24,556,602
JBrowse link
G Kdm5a lysine demethylase 5A enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 6:120,341,060...120,421,535
Ensembl chr 6:120,341,085...120,421,535
JBrowse link
G Klf1 Kruppel-like transcription factor 1 (erythroid) enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 8:85,628,611...85,631,920
Ensembl chr 8:85,628,557...85,631,924
JBrowse link
G Klf11 Kruppel-like transcription factor 11 enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr12:24,701,370...24,712,781
Ensembl chr12:24,701,273...24,712,788
JBrowse link
G Klf15 Kruppel-like transcription factor 15 enables IDA (MGI:5312158|PMID:22367544)
(PMID:22367544)
UniProt PMID:22367544 MGI:5312158 NCBI chr 6:90,437,785...90,468,785
Ensembl chr 6:90,439,558...90,452,220
JBrowse link
G Klf17 Kruppel-like transcription factor 17 enables IDA (MGI:4410400|PMID:19801974)
(PMID:19801974)
UniProt PMID:19801974 MGI:4410400 NCBI chr 4:117,613,856...117,622,863
Ensembl chr 4:117,615,033...117,622,845
JBrowse link
G Klf4 Kruppel-like transcription factor 4 (gut) enables ISO
IDA
(PMID:16954384), (PMID:24161396)
(MGI:4887334|PMID:16954384), (PMID:24161396)
MGI
UniProt
GO_Central
PMID:16954384 PMID:24161396 GO_REF:0000096 MGI:4417868 MGI:4887334 NCBI chr 4:55,527,137...55,536,984
Ensembl chr 4:55,527,143...55,532,466
JBrowse link
G Kmt2d lysine (K)-specific methyltransferase 2D enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr15:98,729,550...98,771,958
Ensembl chr15:98,729,550...98,769,085
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables IDA (PMID:12551949), (PMID:19056892), (PMID:7537238) MGI PMID:7537238 PMID:12551949 PMID:19056892 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005
JBrowse link
G Lhx3 LIM homeobox protein 3 enables IDA (MGI:7339313|PMID:18539116)
(PMID:18539116)
UniProt PMID:18539116 MGI:7339313 NCBI chr 2:26,090,224...26,098,261
Ensembl chr 2:26,090,224...26,098,301
JBrowse link
G Macroh2a1 macroH2A.1 histone enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:56,221,435...56,283,439
Ensembl chr13:56,221,432...56,284,174
JBrowse link
G Macroh2a2 macroH2A.2 histone enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr10:61,574,419...61,620,383
Ensembl chr10:61,574,444...61,619,926
JBrowse link
G Mafk v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) enables IDA (MGI:894855|PMID:9240432)
(PMID:9240432)
UniProt PMID:9240432 MGI:894855 NCBI chr 5:139,777,291...139,788,409
Ensembl chr 5:139,777,268...139,788,408
JBrowse link
G Mef2c myocyte enhancer factor 2C enables IDA (MGI:4940010|PMID:8035824)
(PMID:8035824)
BHF-UCL PMID:8035824 MGI:4940010 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199
JBrowse link
G Men1 multiple endocrine neoplasia 1 enables IDA
IBA
ISO
(MGI:3035842|PMID:14992727)
(PMID:14992727)
UniProt
GO_Central
MGI
PMID:14992727 GO_REF:0000033 GO_REF:0000119 MGI:3035842 MGI:4834177 NCBI chr19:6,385,009...6,390,924
Ensembl chr19:6,385,009...6,390,921
JBrowse link
G Mesp1 mesoderm posterior 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536
JBrowse link
G Mrtfa myocardin related transcription factor A enables IDA (PMID:17991879) MGI PMID:17991879 NCBI chr15:80,896,482...81,074,937
Ensembl chr15:80,896,482...81,074,958
JBrowse link
G Msx1 msh homeobox 1 contributes_to
enables
IDA (MGI:6874923|PMID:23371388)
(PMID:16600910)
(PMID:23371388)
(MGI:3620509|PMID:16600910)
UniProt PMID:16600910 PMID:23371388 MGI:3620509 MGI:6874923 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927
JBrowse link
G Msx2 msh homeobox 2 enables IDA (MGI:3522068|PMID:15383550) UniProt PMID:15383550 MGI:3522068 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110
JBrowse link
G Mterf3 mitochondrial transcription termination factor 3 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr13:67,053,520...67,081,148
Ensembl chr13:67,055,032...67,081,152
JBrowse link
G Mzf1 myeloid zinc finger 1 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:12,777,074...12,792,244
Ensembl chr 7:12,776,230...12,788,691
JBrowse link
G Nanog Nanog homeobox enables ISO
IDA
(PMID:20123909) MGI
GO_Central
PMID:20123909 GO_REF:0000119 MGI:4834177 NCBI chr 6:122,684,448...122,691,592
Ensembl chr 6:122,684,448...122,691,592
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 enables IDA (MGI:3604169|PMID:16127449)
(PMID:16127449)
BHF-UCL PMID:16127449 MGI:3604169 NCBI chr11:62,207,132...62,348,200
Ensembl chr11:62,207,252...62,349,367
JBrowse link
G Nfatc2 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 enables IDA (MGI:4411947|PMID:19752193), (MGI:5562625|PMID:24161931)
(PMID:19752193), (PMID:24161931)
BHF-UCL
UniProt
PMID:19752193 PMID:24161931 MGI:4411947 MGI:5562625 NCBI chr 2:168,318,330...168,443,900
Ensembl chr 2:168,318,330...168,443,577
JBrowse link
G Nfatc3 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 enables IDA
ISO
(MGI:5285124|PMID:21514407), (MGI:6871969|PMID:24970700), (MGI:7565895|PMID:19538478) UniProt
MGI
PMID:19538478 PMID:21514407 PMID:24970700 GO_REF:0000096 MGI:4417868 MGI:5285124 MGI:6871969 MGI:7565895 NCBI chr 8:106,785,450...106,857,169
Ensembl chr 8:106,785,472...106,857,169
JBrowse link
G Nfatc4 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4 enables IDA (MGI:7565895|PMID:19538478) UniProt PMID:19538478 MGI:7565895 NCBI chr14:56,062,252...56,071,400
Ensembl chr14:56,060,601...56,071,400
JBrowse link
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 enables ISO
IDA
(PMID:9240432)
(MGI:894855|PMID:9240432)
MGI
UniProt
GO_Central
PMID:9240432 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:894855 NCBI chr 2:75,505,860...75,535,007
Ensembl chr 2:75,505,857...75,534,985
JBrowse link
G Nfkb1 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 enables ISO
ISS
MGI
GO_Central
UniProt
RGD
PMID:14576180 GO_REF:0000024 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:1358515 NCBI chr 3:135,290,416...135,397,422
Ensembl chr 3:135,290,416...135,397,308
JBrowse link
G Nfya nuclear transcription factor-Y alpha contributes_to ISO
IDA
(PMID:15516209) MGI
GO_Central
PMID:15516209 GO_REF:0000119 MGI:4834177 NCBI chr17:48,693,917...48,716,782
Ensembl chr17:48,693,913...48,716,934
JBrowse link
G Nfyb nuclear transcription factor-Y beta contributes_to ISO
IDA
(PMID:15516209) MGI
GO_Central
PMID:15516209 GO_REF:0000119 MGI:4834177 NCBI chr10:82,584,534...82,599,985
Ensembl chr10:82,584,535...82,599,978
JBrowse link
G Nfyc nuclear transcription factor-Y gamma contributes_to ISO
IDA
(PMID:15516209) MGI
GO_Central
PMID:15516209 GO_REF:0000119 MGI:4834177 NCBI chr 4:120,614,632...120,688,776
Ensembl chr 4:120,614,635...120,688,769
JBrowse link
G Nkx2-1 NK2 homeobox 1 enables ISO
IDA
(PMID:18632661) MGI PMID:18632661 GO_REF:0000119 MGI:4834177 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693
JBrowse link
G Nkx2-5 NK2 homeobox 5 enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983
JBrowse link
G Nkx3-1 NK3 homeobox 1 enables ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr14:69,428,141...69,432,107
Ensembl chr14:69,428,087...69,432,111
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 enables ISO MGI
GO_Central
RGD
PMID:8015547 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:10448983 NCBI chr11:98,658,758...98,666,233
Ensembl chr11:98,658,758...98,666,159
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 contributes_to
enables
IDA
ISO
(MGI:4399016|PMID:17107947) BHF-UCL
GO_Central
MGI
PMID:17107947 GO_REF:0000119 MGI:4399016 MGI:4834177 NCBI chr 2:91,014,406...91,033,189
Ensembl chr 2:91,014,406...91,033,179
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:89,290,096...89,369,484
Ensembl chr10:89,290,096...89,369,447
JBrowse link
G Nr5a2 nuclear receptor subfamily 5, group A, member 2 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 1:136,770,300...136,888,186
Ensembl chr 1:136,770,309...136,888,186
JBrowse link
G Ovol2 ovo like zinc finger 2 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:144,147,095...144,174,000
Ensembl chr 2:144,147,095...144,174,066
JBrowse link
G Pax2 paired box 2 enables IDA
ISO
(MGI:3697544|PMID:17047028)
(PMID:17047028)
UniProt
GO_Central
MGI
PMID:17047028 GO_REF:0000119 MGI:3697544 MGI:4834177 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,735,057...44,826,310
JBrowse link
G Pax6 paired box 6 enables IDA (MGI:6478056|PMID:23990468), (PMID:19521500)
(PMID:19521500), (PMID:23990468)
UniProt PMID:19521500 PMID:23990468 MGI:6478056 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709
JBrowse link
G Pax8 paired box 8 enables IDA
ISO
(MGI:3697544|PMID:17047028)
(PMID:17047028)
UniProt
MGI
PMID:17047028 GO_REF:0000119 MGI:3697544 MGI:4834177 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611
JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839
JBrowse link
G Per1 period circadian clock 1 enables IDA
IBA
(MGI:5569417|PMID:24413057) UniProt
GO_Central
PMID:24413057 GO_REF:0000033 MGI:5569417 NCBI chr11:68,985,934...69,000,791
Ensembl chr11:68,986,043...69,000,786
JBrowse link
G Per2 period circadian clock 2 enables IDA
IBA
(MGI:5014424|PMID:21680841), (MGI:5569417|PMID:24413057)
(PMID:21680841), (PMID:24413057)
UniProt
GO_Central
PMID:21680841 PMID:24413057 GO_REF:0000033 MGI:5014424 MGI:5569417 NCBI chr 1:91,343,699...91,387,028
Ensembl chr 1:91,343,704...91,387,046
JBrowse link
G Per3 period circadian clock 3 enables IBA GO_Central GO_REF:0000033 NCBI chr 4:151,081,475...151,129,167
Ensembl chr 4:151,088,109...151,129,122
JBrowse link
G Pias1 protein inhibitor of activated STAT 1 enables IDA (MGI:3620509|PMID:16600910)
(PMID:16600910)
UniProt PMID:16600910 MGI:3620509 NCBI chr 9:62,785,648...62,888,161
Ensembl chr 9:62,785,650...62,895,206
JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240
JBrowse link
G Pou2f1 POU domain, class 2, transcription factor 1 enables ISO MGI
GO_Central
RGD
PMID:8632766 PMID:12818430 GO_REF:0000096 MGI:4417868 RGD:731231 RGD:9727455 NCBI chr 1:165,692,719...165,830,318
Ensembl chr 1:165,692,723...165,830,247
JBrowse link
G Pou2f2 POU domain, class 2, transcription factor 2 enables IDA (MGI:5450752|PMID:23045607)
(PMID:23045607)
UniProt PMID:23045607 MGI:5450752 NCBI chr 7:24,790,111...24,879,292
Ensembl chr 7:24,786,769...24,879,151
JBrowse link
G Pou5f1 POU domain, class 5, transcription factor 1 enables ISO
IDA
(PMID:17541407), (PMID:25901318)
(MGI:4399014|PMID:17541407), (PMID:25901318)
MGI
GO_Central
UniProt
PMID:17541407 PMID:25901318 GO_REF:0000119 MGI:4399014 MGI:4834177 NCBI chr17:35,816,929...35,821,674
Ensembl chr17:35,816,915...35,821,669
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma enables ISO
IDA
(PMID:16127449), (PMID:21035761)
(MGI:3604169|PMID:16127449), (MGI:4881351|PMID:21035761)
MGI
GO_Central
BHF-UCL
UniProt
PMID:16127449 PMID:21035761 GO_REF:0000096 GO_REF:0000119 MGI:3604169 MGI:4417868 MGI:4834177 MGI:4881351 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain enables IDA (MGI:6512093|PMID:32741026)
(PMID:32741026)
UniProt PMID:32741026 MGI:6512093 NCBI chr10:44,313,170...44,404,579
Ensembl chr10:44,313,173...44,404,497
JBrowse link
G Prdm16 PR domain containing 16 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 4:154,400,579...154,721,851
Ensembl chr 4:154,400,582...154,721,330
JBrowse link
G Prdm5 PR domain containing 5 enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 6:65,754,640...65,914,606
Ensembl chr 6:65,755,972...65,913,994
JBrowse link
G Prdm9 PR domain containing 9 enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr17:15,763,334...15,784,636
Ensembl chr17:15,763,341...15,784,616
JBrowse link
G Prox1 prospero homeobox 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 1:189,850,232...189,903,024
Ensembl chr 1:189,850,232...189,902,911
JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein enables IDA (PMID:25901318) MGI PMID:25901318 NCBI chr 4:55,350,042...55,392,237
Ensembl chr 4:55,350,043...55,392,237
JBrowse link
G Rara retinoic acid receptor, alpha enables IMP
IDA
(MGI:4411947|PMID:19752193)
(PMID:19752193)
(PMID:25209250)
UniProt
MGI
PMID:19752193 PMID:25209250 MGI:4411947 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768
JBrowse link
G Rbbp5 retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:132,405,087...132,436,382
Ensembl chr 1:132,405,103...132,433,397
JBrowse link
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:5,686,993...5,698,162
Ensembl chr19:5,687,511...5,698,158
JBrowse link
G Rest RE1-silencing transcription factor enables IDA
ISO
IBA
(MGI:3580760|PMID:15907476)
(PMID:15907476)
UniProt
GO_Central
MGI
PMID:15907476 GO_REF:0000033 GO_REF:0000119 MGI:3580760 MGI:4834177 NCBI chr 5:77,413,273...77,434,279
Ensembl chr 5:77,413,338...77,434,279
JBrowse link
G Rfx3 regulatory factor X, 3 (influences HLA class II expression) enables IDA
ISO
(MGI:4361058|PMID:19671664)
(PMID:19671664)
UniProt
GO_Central
MGI
PMID:19671664 GO_REF:0000119 MGI:4361058 MGI:4834177 NCBI chr19:27,739,121...27,995,287
Ensembl chr19:27,739,121...27,988,566
JBrowse link
G Rfx6 regulatory factor X, 6 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr10:51,553,856...51,606,525
Ensembl chr10:51,553,852...51,606,528
JBrowse link
G Rnf10 ring finger protein 10 enables ISO
ISS
IBA
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr 5:115,379,829...115,410,951
Ensembl chr 5:115,379,471...115,410,957
JBrowse link
G Runx1 runt related transcription factor 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr16:92,398,354...92,622,962
Ensembl chr16:92,398,354...92,623,037
JBrowse link
G Runx2 runt related transcription factor 2 enables IDA (MGI:3822269|PMID:18804520), (PMID:12551949)
(PMID:12551949), (PMID:18804520)
MGI
UniProt
PMID:12551949 PMID:18804520 MGI:3822269 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684
JBrowse link
G Rxra retinoid X receptor alpha contributes_to
enables
IDA
ISO
(MGI:4399016|PMID:17107947)
(PMID:17107947)
BHF-UCL
GO_Central
MGI
PMID:17107947 GO_REF:0000119 MGI:4399016 MGI:4834177 NCBI chr 2:27,566,457...27,653,331
Ensembl chr 2:27,566,452...27,652,969
JBrowse link
G Rxrb retinoid X receptor beta enables IDA (MGI:4820711|PMID:18922886)
(PMID:18922886)
UniProt PMID:18922886 MGI:4820711 NCBI chr17:34,250,786...34,257,377
Ensembl chr17:34,250,786...34,257,373
JBrowse link
G Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) enables IDA (MGI:5014424|PMID:21680841)
(PMID:21680841)
UniProt PMID:21680841 MGI:5014424 NCBI chr 4:126,914,504...126,944,894
Ensembl chr 4:126,915,117...126,930,806
JBrowse link
G Six1 sine oculis-related homeobox 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Smad3 SMAD family member 3 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 9:63,554,048...63,665,276
Ensembl chr 9:63,554,049...63,665,276
JBrowse link
G Smad4 SMAD family member 4 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851
JBrowse link
G Smad6 SMAD family member 6 enables ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 9:63,860,358...63,929,374
Ensembl chr 9:63,860,358...63,929,341
JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr19:26,582,578...26,755,721
Ensembl chr19:26,582,450...26,755,722
JBrowse link
G Sox10 SRY (sex determining region Y)-box 10 enables ISO
IDA
(PMID:17084361) MGI PMID:17084361 GO_REF:0000096 MGI:4417868 NCBI chr15:79,039,113...79,048,690
Ensembl chr15:79,039,108...79,049,440
JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 enables ISO
IDA
(PMID:18505825)
(MGI:3803393|PMID:18505825)
MGI
UniProt
PMID:18505825 GO_REF:0000096 MGI:3803393 MGI:4417868 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573
JBrowse link
G Sox12 SRY (sex determining region Y)-box 12 enables IDA (MGI:3803393|PMID:18505825) UniProt PMID:18505825 MGI:3803393 NCBI chr 2:152,235,531...152,239,966
Ensembl chr 2:152,235,531...152,239,983
JBrowse link
G Sox13 SRY (sex determining region Y)-box 13 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 1:133,310,038...133,352,159
Ensembl chr 1:133,310,041...133,352,115
JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 enables IDA (MGI:4887291|PMID:20802155), (MGI:4887547|PMID:19328208), (PMID:19515696), (PMID:20123909), (PMID:25209250), (PMID:8636240)
(PMID:19328208), (PMID:19515696), (PMID:20123909), (PMID:20802155), (PMID:25209250), (PMID:8636240)
MGI
BHF-UCL
PMID:8636240 PMID:19328208 PMID:19515696 PMID:20123909 PMID:20802155 More... MGI:4887291 MGI:4887547 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577
JBrowse link
G Sox18 SRY (sex determining region Y)-box 18 enables ISO
IDA
(PMID:14634005), (PMID:18931657) MGI
GO_Central
PMID:14634005 PMID:18931657 GO_REF:0000119 MGI:4834177 NCBI chr 2:181,311,630...181,313,433
Ensembl chr 2:181,311,629...181,313,433
JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 enables ISO
IDA
IEA
(PMID:19328208), (PMID:20123909), (PMID:25901318)
(MGI:4887547|PMID:19328208), (PMID:20123909), (PMID:25901318)
MGI
Ensembl
GO_Central
PMID:19328208 PMID:20123909 PMID:25901318 GO_REF:0000096 GO_REF:0000107 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:4887547 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610
JBrowse link
G Sox4 SRY (sex determining region Y)-box 4 enables IDA (MGI:3803393|PMID:18505825) UniProt PMID:18505825 MGI:3803393 NCBI chr13:29,132,902...29,137,682
Ensembl chr13:29,132,902...29,137,696
JBrowse link
G Sox5 SRY (sex determining region Y)-box 5 enables ISO
IDA
(PMID:17084361) MGI
GO_Central
PMID:17084361 GO_REF:0000119 MGI:4834177 NCBI chr 6:143,774,151...144,728,008
Ensembl chr 6:143,774,151...144,727,703
JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 enables ISO
IDA
(PMID:17084361) MGI
GO_Central
PMID:17084361 GO_REF:0000119 MGI:4834177 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031
JBrowse link
G Sox7 SRY (sex determining region Y)-box 7 enables IDA (MGI:4887547|PMID:19328208), (PMID:19515696)
(PMID:19328208), (PMID:19515696)
MGI
BHF-UCL
PMID:19328208 PMID:19515696 MGI:4887547 NCBI chr14:64,181,155...64,188,181
Ensembl chr14:64,181,122...64,188,181
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 enables IDA (MGI:86312|PMID:9119111), (PMID:17084361) UniProt PMID:9119111 PMID:17084361 MGI:86312 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Sp1 trans-acting transcription factor 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr15:102,314,751...102,344,839
Ensembl chr15:102,314,578...102,344,839
JBrowse link
G Spi1 Spi-1 proto-oncogene enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:90,912,750...90,946,104
Ensembl chr 2:90,912,735...90,946,101
JBrowse link
G Srebf2 sterol regulatory element binding factor 2 enables IDA (PMID:11739104) MGI PMID:11739104 NCBI chr15:82,031,455...82,089,580
Ensembl chr15:82,031,382...82,089,580
JBrowse link
G Stat3 signal transducer and activator of transcription 3 enables IDA
ISO
(MGI:7565895|PMID:19538478) UniProt
GO_Central
MGI
PMID:19538478 GO_REF:0000119 MGI:4834177 MGI:7565895 NCBI chr11:100,777,632...100,830,447
Ensembl chr11:100,775,924...100,830,366
JBrowse link
G Suv39h1 suppressor of variegation 3-9 1 enables IDA (MGI:5569417|PMID:24413057)
(PMID:24413057)
UniProt PMID:24413057 MGI:5569417 NCBI chr  X:7,927,401...7,940,994
Ensembl chr  X:7,927,410...7,940,999
JBrowse link
G Suv39h2 suppressor of variegation 3-9 2 enables IDA (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chr 2:3,456,852...3,476,085
Ensembl chr 2:3,456,852...3,476,068
JBrowse link
G Taf2 TATA-box binding protein associated factor 2 enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:54,878,525...54,935,580
Ensembl chr15:54,878,527...54,935,548
JBrowse link
G Taf7 TATA-box binding protein associated factor 7 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr18:37,773,544...37,777,257
Ensembl chr18:37,773,544...37,777,257
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr13:100,787,851...100,792,568
Ensembl chr13:100,788,087...100,792,568
Ensembl chr13:100,788,087...100,792,568
JBrowse link
G Tal1 T cell acute lymphocytic leukemia 1 enables IDA (MGI:3849640|PMID:19497860), (PMID:9111058)
(PMID:19497860), (PMID:9111058)
MGI PMID:9111058 PMID:19497860 MGI:3849640 NCBI chr 4:114,913,623...114,928,952
Ensembl chr 4:114,913,623...114,928,952
JBrowse link
G Tbl1x transducin (beta)-like 1 X-linked enables IDA
ISO
(MGI:3604169|PMID:16127449)
(PMID:16127449)
BHF-UCL
GO_Central
MGI
PMID:16127449 GO_REF:0000119 MGI:3604169 MGI:4834177 NCBI chr  X:76,553,053...76,706,591
Ensembl chr  X:76,554,619...76,706,589
JBrowse link
G Tbl1xr1 transducin (beta)-like 1X-linked receptor 1 enables IDA
ISO
(MGI:3604169|PMID:16127449)
(PMID:16127449)
BHF-UCL
MGI
PMID:16127449 GO_REF:0000119 MGI:3604169 MGI:4834177 NCBI chr 3:22,130,756...22,270,758
Ensembl chr 3:22,130,816...22,270,758
JBrowse link
G Tbp TATA box binding protein enables ISO MGI GO_REF:0000008 GO_REF:0000119 NCBI chr17:15,720,150...15,737,689
Ensembl chr17:15,720,150...15,748,641
JBrowse link
G Tbx21 T-box 21 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157
JBrowse link
G Tcf12 transcription factor 12 contributes_to ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 9:71,751,534...72,019,611
Ensembl chr 9:71,749,970...72,019,153
JBrowse link
G Tcf20 transcription factor 20 enables IDA (PMID:7760812) MGI PMID:7760812 NCBI chr15:82,692,648...82,872,304
Ensembl chr15:82,692,637...82,872,073
JBrowse link
G Tcf3 transcription factor 3 contributes_to ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:80,245,375...80,269,814
Ensembl chr10:80,245,348...80,269,481
JBrowse link
G Tcf7 transcription factor 7, T cell specific enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:52,137,347...52,174,211
Ensembl chr11:52,143,198...52,174,158
JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box enables ISO
IDA
(PMID:20044351) MGI
GO_Central
PMID:20044351 GO_REF:0000119 MGI:4834177 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086
JBrowse link
G Tfam transcription factor A, mitochondrial enables IBA GO_Central GO_REF:0000033 NCBI chr10:71,061,298...71,074,157
Ensembl chr10:71,061,294...71,074,110
JBrowse link
G Tfap2a transcription factor AP-2, alpha enables ISO
ISS
MGI
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852
JBrowse link
G Tfap4 transcription factor AP4 enables IDA
ISO
(MGI:3663964|PMID:16924111) UniProt
GO_Central
MGI
PMID:16924111 GO_REF:0000119 MGI:3663964 MGI:4834177 NCBI chr16:4,362,525...4,378,625
Ensembl chr16:4,362,525...4,377,718
JBrowse link
G Tfe3 transcription factor E3 enables IDA (MGI:3662947|PMID:16936731)
(PMID:16936731)
UniProt PMID:16936731 MGI:3662947 NCBI chr  X:7,628,769...7,641,441
Ensembl chr  X:7,628,799...7,641,441
JBrowse link
G Tfeb transcription factor EB enables IDA
ISO
(MGI:3662947|PMID:16936731)
(PMID:16936731)
UniProt
GO_Central
MGI
PMID:16936731 GO_REF:0000119 MGI:3662947 MGI:4834177 NCBI chr17:48,047,962...48,103,341
Ensembl chr17:48,047,955...48,103,344
JBrowse link
G Thra thyroid hormone receptor alpha enables IDA
ISO
(MGI:5700300|PMID:19001373) ParkinsonsUK-UCL
GO_Central
MGI
PMID:19001373 GO_REF:0000119 MGI:4834177 MGI:5700300 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832
JBrowse link
G Tnf tumor necrosis factor enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
G Trp53 transformation related protein 53 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
G Trp63 transformation related protein 63 enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr16:25,502,513...25,710,842
Ensembl chr16:25,502,513...25,710,852
JBrowse link
G Trp73 transformation related protein 73 enables ISO
IEA
MGI
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000119 MGI:4834177 NCBI chr 4:154,140,706...154,224,332
Ensembl chr 4:154,140,706...154,224,665
JBrowse link
G Ttc39aos1 Ttc39a opposite strand RNA 1 enables IDA (PMID:27315481) MGI PMID:27315481 NCBI chr 4:109,259,476...109,263,454
Ensembl chr 4:109,259,476...109,263,430
JBrowse link
G Vsx1 visual system homeobox 1 enables IBA GO_Central GO_REF:0000033 NCBI chr 2:150,522,622...150,531,057
Ensembl chr 2:150,522,622...150,531,280
JBrowse link
G Wt1 WT1 transcription factor enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961
JBrowse link
G Xbp1 X-box binding protein 1 enables IDA
ISO
(MGI:3798313|PMID:18556558)
(PMID:18556558)
UniProt
GO_Central
MGI
PMID:18556558 GO_REF:0000119 MGI:3798313 MGI:4834177 NCBI chr11:5,470,641...5,475,993
Ensembl chr11:5,470,659...5,475,893
JBrowse link
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 enables ISO
IEA
MGI
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 1:72,346,576...72,434,112
Ensembl chr 1:72,346,586...72,434,111
JBrowse link
G Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:81,868,805...81,924,286
Ensembl chr15:81,872,036...81,924,286
JBrowse link
G Yap1 yes-associated protein 1 enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 9:7,932,000...8,004,890
Ensembl chr 9:7,932,000...8,004,597
JBrowse link
G Yy1 YY1 transcription factor enables ISO (PMID:9857059) MGI PMID:9857059 NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074
JBrowse link
G Zbed4 zinc finger, BED type containing 4 enables IDA (MGI:6234760|PMID:22693546)
(PMID:22693546)
UniProt PMID:22693546 MGI:6234760 NCBI chr15:88,635,856...88,668,719
Ensembl chr15:88,635,863...88,668,719
JBrowse link
G Zbed6 zinc finger, BED type containing 6 enables IDA (MGI:4421252|PMID:20016685), (MGI:6120647|PMID:29440408) ARUK-UCL PMID:20016685 PMID:29440408 MGI:4421252 MGI:6120647 NCBI chr 1:133,547,606...133,589,112
Ensembl chr 1:133,547,678...133,589,056
JBrowse link
G Zbtb14 zinc finger and BTB domain containing 14 enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr17:69,690,170...69,697,747
Ensembl chr17:69,690,045...69,698,194
JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 enables IDA (MGI:5913553|PMID:28327662) UniProt PMID:28327662 MGI:5913553 NCBI chr16:42,728,008...43,462,981
Ensembl chr16:42,696,244...43,462,965
JBrowse link
G Zbtb46 zinc finger and BTB domain containing 46 enables IDA (MGI:5461437|PMID:22851594)
(PMID:22851594)
ARUK-UCL PMID:22851594 MGI:5461437 NCBI chr 2:181,012,105...181,134,776
Ensembl chr 2:181,029,555...181,101,219
JBrowse link
G Zbtb48 zinc finger and BTB domain containing 48 enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 4:152,104,230...152,112,132
Ensembl chr 4:152,104,231...152,112,128
JBrowse link
G Zbtb8a zinc finger and BTB domain containing 8a enables ISO
IEA
MGI
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 4:129,247,425...129,271,821
Ensembl chr 4:129,247,421...129,271,909
JBrowse link
G Zfhx3 zinc finger homeobox 3 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 8:109,005,975...109,688,272
Ensembl chr 8:108,669,276...109,688,262
JBrowse link
G Zfp148 zinc finger protein 148 enables ISO MGI
GO_Central
RGD
PMID:8943318 GO_REF:0000096 MGI:4417868 RGD:61784 NCBI chr16:33,201,145...33,324,273
Ensembl chr16:33,201,206...33,324,733
JBrowse link
G Zfp174 zinc finger protein 174 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr16:3,665,105...3,691,751
Ensembl chr16:3,665,132...3,676,744
JBrowse link
G Zfp217 zinc finger protein 217 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:169,950,563...169,993,598
Ensembl chr 2:169,950,563...169,990,023
JBrowse link
G Zfp263 zinc finger protein 263 enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr16:3,561,883...3,568,654
Ensembl chr16:3,561,957...3,568,654
JBrowse link
G Zfp281 zinc finger protein 281 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 1:136,552,639...136,558,129
Ensembl chr 1:136,552,639...136,557,791
JBrowse link
G Zfp335 zinc finger protein 335 enables IDA (MGI:5468205|PMID:23178126) UniProt PMID:23178126 MGI:5468205 NCBI chr 2:164,733,802...164,756,034
Ensembl chr 2:164,733,802...164,753,677
JBrowse link
G Zfp513 zinc finger protein 513 enables IDA
ISO
(MGI:4887292|PMID:20797688) UniProt
GO_Central
MGI
PMID:20797688 GO_REF:0000119 MGI:4834177 MGI:4887292 NCBI chr 5:31,356,325...31,360,007
Ensembl chr 5:31,356,325...31,359,647
JBrowse link
G Zfp568 zinc finger protein 568 enables IMP (MGI:5908476|PMID:28522536) UniProt PMID:28522536 MGI:5908476 NCBI chr 7:29,683,380...29,727,707
Ensembl chr 7:29,683,380...29,727,707
JBrowse link
G Zfp579 zinc finger protein 579 enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 7:4,995,851...4,999,100
Ensembl chr 7:4,986,482...4,999,157
JBrowse link
G Zfp616 zinc finger protein 616 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:73,951,723...73,978,127
Ensembl chr11:73,960,781...73,978,118
JBrowse link
G Zfp639 zinc finger protein 639 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 3:32,564,355...32,574,982
Ensembl chr 3:32,564,408...32,574,982
JBrowse link
G Zfp658 zinc finger protein 658 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 Ensembl chr 1:117,893,669...117,914,614 JBrowse link
G Zfp735 zinc finger protein 735 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:73,579,604...73,604,634
Ensembl chr11:73,579,604...73,604,624
JBrowse link
G Zfp746 zinc finger protein 746 enables ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 6:48,039,325...48,064,275
Ensembl chr 6:48,039,329...48,063,527
JBrowse link
cAMP response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 enables ISO
IBA
IDA
(PMID:11231009) MGI
GO_Central
RGD
PMID:11231009 PMID:12196528 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:727574 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983
JBrowse link
G Atf7 activating transcription factor 7 enables IBA GO_Central GO_REF:0000033 NCBI chr15:102,434,381...102,533,899
Ensembl chr15:102,434,381...102,533,899
JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables IDA
IBA
ISO
(MGI:6414696|PMID:23729669)
(PMID:23729669)
ARUK-UCL
GO_Central
MGI
PMID:23729669 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6414696 NCBI chr 1:64,571,963...64,643,707
Ensembl chr 1:64,571,804...64,643,707
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 enables IDA
IBA
(MGI:4438316|PMID:19767743) UniProt
GO_Central
PMID:19767743 GO_REF:0000033 MGI:4438316 NCBI chr 2:91,812,673...91,854,515
Ensembl chr 2:91,812,673...91,854,847
JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 enables IMP
IBA
ISO
(MGI:4438315|PMID:19767744)
(PMID:19767744)
UniProt
GO_Central
MGI
PMID:19767744 GO_REF:0000033 GO_REF:0000119 MGI:4438315 MGI:4834177 NCBI chr 6:37,307,956...37,419,083
Ensembl chr 6:37,304,190...37,419,081
JBrowse link
G Creb5 cAMP responsive element binding protein 5 enables IBA GO_Central GO_REF:0000033 NCBI chr 6:53,264,154...53,677,349
Ensembl chr 6:53,264,255...53,677,361
JBrowse link
G E4f1 E4F transcription factor 1 enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr17:24,662,752...24,674,366
Ensembl chr17:24,662,752...24,689,287
JBrowse link
G Hmga2 high mobility group AT-hook 2 enables ISO
ISS
MGI
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374
JBrowse link
G Jdp2 Jun dimerization protein 2 enables IDA (PMID:11231009) MGI PMID:11231009 NCBI chr12:85,645,190...85,686,652
Ensembl chr12:85,645,801...85,686,652
JBrowse link
G Jun jun proto-oncogene enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:94,937,273...94,940,459
Ensembl chr 4:94,937,271...94,940,459
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 enables IDA (MGI:5543879|PMID:23897430)
(PMID:23897430)
UniProt PMID:23897430 MGI:5543879 NCBI chr 4:48,045,098...48,086,446
Ensembl chr 4:48,045,153...48,086,447
JBrowse link
G Tcf12 transcription factor 12 enables ISO
IEA
MGI
Ensembl
RGD
PMID:7683670 GO_REF:0000096 GO_REF:0000107 MGI:4417868 RGD:729997 NCBI chr 9:71,751,534...72,019,611
Ensembl chr 9:71,749,970...72,019,153
JBrowse link
carbohydrate response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlxipl MLX interacting protein-like enables TAS (MGI:4457241|PMID:18591247)
(PMID:18591247)
BHF-UCL PMID:18591247 MGI:4457241 NCBI chr 5:135,118,744...135,168,622
Ensembl chr 5:135,118,744...135,167,236
JBrowse link
cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl-hydrocarbon receptor enables ISO (PMID:23275542) MGI PMID:23275542 NCBI chr12:35,547,978...35,584,988
Ensembl chr12:35,547,973...35,585,037
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables ISO (PMID:23275542) MGI PMID:23275542 NCBI chr 3:95,341,674...95,404,551
Ensembl chr 3:95,341,699...95,404,551
JBrowse link
G Atf2 activating transcription factor 2 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983
JBrowse link
G Ctcf CCCTC-binding factor enables IDA (PMID:28636939) MGI PMID:28636939 NCBI chr 8:106,351,135...106,409,554
Ensembl chr 8:106,363,200...106,409,554
JBrowse link
G Cxxc1 CXXC finger protein 1 enables ISO MGI
GO_Central
RGD
PMID:21814290 GO_REF:0000096 MGI:4417868 RGD:9587757 NCBI chr18:74,349,283...74,354,564
Ensembl chr18:74,349,195...74,354,567
JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables IDA (MGI:4818833|PMID:20616082), (MGI:4839662|PMID:20951351)
(PMID:20616082), (PMID:20951351)
UniProt PMID:20616082 PMID:20951351 MGI:4818833 MGI:4839662 NCBI chr19:25,483,070...25,581,692
Ensembl chr19:25,482,982...25,581,693
JBrowse link
G E2f1 E2F transcription factor 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812
JBrowse link
G E2f2 E2F transcription factor 2 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 4:135,899,585...135,923,368
Ensembl chr 4:135,899,705...135,923,368
JBrowse link
G E2f3 E2F transcription factor 3 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:30,090,558...30,171,172
Ensembl chr13:30,090,558...30,170,046
JBrowse link
G E2f7 E2F transcription factor 7 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:110,580,799...110,623,245
Ensembl chr10:110,581,300...110,623,245
JBrowse link
G E2f8 E2F transcription factor 8 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 7:48,516,177...48,531,821
Ensembl chr 7:48,516,177...48,531,344
JBrowse link
G Ell elongation factor RNA polymerase II enables IBA GO_Central GO_REF:0000033 NCBI chr 8:70,992,345...71,045,508
Ensembl chr 8:70,992,107...71,045,508
JBrowse link
G Ell2 elongation factor for RNA polymerase II 2 enables IBA GO_Central GO_REF:0000033 NCBI chr13:75,855,603...75,920,480
Ensembl chr13:75,854,876...75,920,483
JBrowse link
G Ell3 elongation factor RNA polymerase II-like 3 enables IBA
IDA
(PMID:23273992) GO_Central
UniProt
PMID:23273992 GO_REF:0000033 NCBI chr 2:121,269,508...121,273,082
Ensembl chr 2:121,269,491...121,274,759
JBrowse link
G Ep300 E1A binding protein p300 enables ISO RGD
GO_Central
MGI
PMID:19057620 GO_REF:0000096 MGI:4417868 RGD:2311715 NCBI chr15:81,470,329...81,536,273
Ensembl chr15:81,469,552...81,536,278
JBrowse link
G Epas1 endothelial PAS domain protein 1 enables IDA (PMID:12464608) MGI PMID:12464608 NCBI chr17:87,061,292...87,140,838
Ensembl chr17:87,061,128...87,140,838
JBrowse link
G Esrrb estrogen related receptor, beta enables IDA (MGI:5529430|PMID:23508100), (MGI:5887187|PMID:26206133)
(PMID:23508100), (PMID:26206133)
UniProt PMID:23508100 PMID:26206133 MGI:5529430 MGI:5887187 NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402
JBrowse link
G Foxn2 forkhead box N2 enables IBA GO_Central GO_REF:0000033 NCBI chr17:88,746,430...88,797,961
Ensembl chr17:88,748,139...88,797,961
JBrowse link
G Foxn3 forkhead box N3 enables IBA GO_Central GO_REF:0000033 NCBI chr12:99,156,340...99,529,926
Ensembl chr12:99,156,337...99,529,841
JBrowse link
G Foxn4 forkhead box N4 enables IDA
ISO
IBA
(MGI:5314555|PMID:22323600)
(PMID:22323600)
UniProt
GO_Central
MGI
PMID:22323600 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5314555 NCBI chr 5:114,392,225...114,412,486
Ensembl chr 5:114,392,225...114,411,868
JBrowse link
G Gata1 GATA binding protein 1 enables IDA (MGI:5009777|PMID:20855530) UniProt PMID:20855530 MGI:5009777 NCBI chr  X:7,825,504...7,842,844
Ensembl chr  X:7,825,499...7,844,310
JBrowse link
G Gata3 GATA binding protein 3 enables ISO
IDA
(PMID:19666510), (PMID:20855530)
(MGI:5009777|PMID:20855530), (PMID:19666510)
MGI
GO_Central
PMID:19666510 PMID:20855530 GO_REF:0000119 MGI:4834177 MGI:5009777 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
JBrowse link
G Gata4 GATA binding protein 4 enables ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141
JBrowse link
G Gata5 GATA binding protein 5 enables IDA (MGI:5009777|PMID:20855530)
(PMID:20855530)
UniProt PMID:20855530 MGI:5009777 NCBI chr 2:179,966,881...179,977,296
Ensembl chr 2:179,966,926...179,976,492
JBrowse link
G Gata6 GATA binding protein 6 enables ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635
JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:8,728,419...8,732,098
Ensembl chr 3:8,728,419...8,732,316
JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 enables IDA (MGI:5284767|PMID:18239137)
(PMID:18239137)
BHF-UCL PMID:18239137 MGI:5284767 NCBI chr10:30,708,355...30,718,779
Ensembl chr10:30,708,355...30,718,797
JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304
JBrowse link
G Hmga1 high mobility group AT-hook 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr17:27,774,798...27,782,649
Ensembl chr17:27,775,471...27,782,648
JBrowse link
G Hmga1b high mobility group AT-hook 1B enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:120,653,620...120,655,218
Ensembl chr11:120,653,620...120,655,245
JBrowse link
G Hmgb2 high mobility group box 2 enables IDA (MGI:5490149|PMID:23495099)
(PMID:23495099)
AgBase PMID:23495099 MGI:5490149 NCBI chr 8:57,964,877...57,969,033
Ensembl chr 8:57,964,941...57,969,033
JBrowse link
G Hnf1b HNF1 homeobox B enables ISO
IDA
(PMID:14570708), (PMID:15067314), (PMID:16274963), (PMID:1685988) MGI
RGD
PMID:1673926 PMID:1685988 PMID:14570708 PMID:15067314 PMID:16274963 GO_REF:0000096 MGI:4417868 RGD:729944 NCBI chr11:83,741,035...83,796,743
Ensembl chr11:83,740,889...83,796,645
JBrowse link
G Hnf4a hepatic nuclear factor 4, alpha enables ISO MGI
RGD
PMID:16640558 GO_REF:0000096 MGI:4417868 RGD:12904755 NCBI chr 2:163,348,731...163,414,827
Ensembl chr 2:163,348,728...163,414,830
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K enables ISO MGI
GO_Central
RGD
PMID:15361071 GO_REF:0000096 MGI:4417868 RGD:10002777 NCBI chr13:58,538,946...58,551,157
Ensembl chr13:58,538,956...58,551,157
JBrowse link
G Hoxa13 homeobox A13 enables IDA (PMID:27706137) MGI PMID:27706137 NCBI chr 6:52,235,833...52,237,865
Ensembl chr 6:52,234,674...52,237,788
JBrowse link
G Hoxd13 homeobox D13 enables IDA (PMID:27706137) MGI PMID:27706137 NCBI chr 2:74,498,569...74,501,947
Ensembl chr 2:74,498,654...74,501,943
JBrowse link
G Irf4 interferon regulatory factor 4 enables IMP (MGI:6269211|PMID:30413670)
(PMID:30413670)
ARUK-UCL PMID:30413670 MGI:6269211 NCBI chr13:30,933,191...30,950,965
Ensembl chr13:30,933,209...30,950,959
JBrowse link
G Irf7 interferon regulatory factor 7 enables IDA (MGI:5792628|PMID:27129230)
(PMID:27129230)
UniProt PMID:27129230 MGI:5792628 NCBI chr 7:140,843,096...140,846,412
Ensembl chr 7:140,842,619...140,846,394
JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain enables IBA GO_Central GO_REF:0000033 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225
JBrowse link
G Isl2 insulin related protein 2 (islet 2) enables IBA GO_Central GO_REF:0000033 NCBI chr 9:55,445,961...55,454,951
Ensembl chr 9:55,445,956...55,453,464
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 enables IDA (PMID:15545629) MGI PMID:15545629 NCBI chr 3:130,903,972...131,018,006
Ensembl chr 3:130,904,120...131,018,005
JBrowse link
G Lhx1 LIM homeobox protein 1 enables IDA (PMID:26494787) MGI PMID:26494787 NCBI chr11:84,408,801...84,416,360
Ensembl chr11:84,409,110...84,416,361
JBrowse link
G Mef2c myocyte enhancer factor 2C enables IDA (PMID:16140986), (PMID:20399744) MGI PMID:16140986 PMID:20399744 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199
JBrowse link
G Mesp1 mesoderm posterior 1 enables IDA (MGI:4441249|PMID:18593560)
(PMID:18593560)
BHF-UCL PMID:18593560 MGI:4441249 NCBI chr 7:79,441,989...79,443,338
Ensembl chr 7:79,441,989...79,443,536
JBrowse link
G Mixl1 Mix paired-like homeobox enables IDA (MGI:5448504|PMID:22265737) BHF-UCL PMID:22265737 MGI:5448504 NCBI chr 1:180,520,608...180,524,599
Ensembl chr 1:180,520,608...180,524,599
JBrowse link
G Msx1 msh homeobox 1 enables IDA (PMID:27741242) MGI PMID:27741242 NCBI chr 5:37,977,835...37,981,929
Ensembl chr 5:37,977,829...37,981,927
JBrowse link
G Mtf1 metal response element binding transcription factor 1 enables ISO
IDA
(PMID:10931824), (PMID:10952993), (PMID:16886906), (PMID:9582278) MGI
GO_Central
PMID:9582278 PMID:10931824 PMID:10952993 PMID:16886906 GO_REF:0000119 MGI:4834177 NCBI chr 4:124,696,342...124,743,593
Ensembl chr 4:124,695,897...124,743,593
JBrowse link
G Myc myelocytomatosis oncogene enables IDA (PMID:15511642) MGI PMID:15511642 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223
JBrowse link
G Myod1 myogenic differentiation 1 enables IDA (PMID:12486129), (PMID:19121967) MGI PMID:12486129 PMID:19121967 NCBI chr 7:46,025,898...46,028,516
Ensembl chr 7:46,025,898...46,028,523
JBrowse link
G Myog myogenin enables IDA (PMID:20399744) MGI PMID:20399744 NCBI chr 1:134,217,742...134,220,286
Ensembl chr 1:134,217,727...134,220,286
JBrowse link
G Myt1 myelin transcription factor 1 enables IDA (PMID:17442045) MGI PMID:17442045 NCBI chr 2:181,405,099...181,469,579
Ensembl chr 2:181,405,125...181,469,590
JBrowse link
G Nfe2 nuclear factor, erythroid derived 2 contributes_to ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:103,156,640...103,166,809
Ensembl chr15:103,156,639...103,166,830
JBrowse link
G Nfic nuclear factor I/C enables ISO MGI
RGD
PMID:10521600 GO_REF:0000096 MGI:4417868 RGD:633408 NCBI chr10:81,232,025...81,267,753
Ensembl chr10:81,232,020...81,291,469
JBrowse link
G Nkx2-2 NK2 homeobox 2 enables IDA (MGI:4420345|PMID:19759004) UniProt PMID:19759004 MGI:4420345 NCBI chr 2:146,967,909...147,037,270
Ensembl chr 2:147,019,466...147,036,163
JBrowse link
G Notch1 notch 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675
JBrowse link
G Notch2 notch 2 enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677
JBrowse link
G Notch4 notch 4 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr17:34,783,257...34,807,517
Ensembl chr17:34,783,242...34,807,477
JBrowse link
G Nr1d2 nuclear receptor subfamily 1, group D, member 2 enables IDA (MGI:5526909|PMID:23221024), (MGI:5526936|PMID:19682428)
(PMID:19682428), (PMID:23221024)
UniProt PMID:19682428 PMID:23221024 MGI:5526909 MGI:5526936 NCBI chr14:4,230,549...4,265,639
Ensembl chr14:4,230,569...4,265,642
JBrowse link
G Otx2 orthodenticle homeobox 2 enables TAS (PMID:26494787) MGI PMID:26494787 NCBI chr14:48,894,238...48,905,101
Ensembl chr14:48,895,134...48,911,276
JBrowse link
G Pax2 paired box 2 enables IDA
ISO
(MGI:3768605|PMID:17785448)
(PMID:17785448)
UniProt
GO_Central
MGI
PMID:17785448 GO_REF:0000119 MGI:3768605 MGI:4834177 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,735,057...44,826,310
JBrowse link
G Pou5f1 POU domain, class 5, transcription factor 1 enables IDA (MGI:5490149|PMID:23495099)
(PMID:23495099)
AgBase PMID:23495099 MGI:5490149 NCBI chr17:35,816,929...35,821,674
Ensembl chr17:35,816,915...35,821,669
JBrowse link
G Rsl1 regulator of sex limited protein 1 enables IDA (PMID:22801370) MGI PMID:22801370 NCBI chr13:67,321,238...67,332,108
Ensembl chr13:67,321,195...67,332,108
JBrowse link
G Runx2 runt related transcription factor 2 enables IMP (MGI:6453224|PMID:31545469) ARUK-UCL PMID:31545469 MGI:6453224 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684
JBrowse link
G Sall1 spalt like transcription factor 1 enables IDA (MGI:4946171|PMID:21062744) BHF-UCL PMID:21062744 MGI:4946171 NCBI chr 8:89,753,867...89,770,790
Ensembl chr 8:89,753,863...89,770,790
JBrowse link
G Scx scleraxis scleraxis bHLH transcription factor enables IDA (PMID:17430895) MGI PMID:17430895 NCBI chr15:76,341,594...76,343,668
Ensembl chr15:76,341,652...76,343,658
JBrowse link
G Serinc4 serine incorporator 4 enables IDA
IBA
(MGI:5448843|PMID:23273992)
(PMID:23273992)
UniProt
GO_Central
PMID:23273992 GO_REF:0000033 MGI:5448843 NCBI chr 2:121,281,658...121,287,245
Ensembl chr 2:121,269,540...121,287,262
JBrowse link
G Smad3 SMAD family member 3 enables ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 9:63,554,048...63,665,276
Ensembl chr 9:63,554,049...63,665,276
JBrowse link
G Smc3 structural maintenance of chromosomes 3 enables IDA (PMID:28636939) MGI PMID:28636939 NCBI chr19:53,588,827...53,634,262
Ensembl chr19:53,588,829...53,634,264
JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 enables IDA (MGI:5285123|PMID:21527504), (MGI:5285167|PMID:19808959)
(PMID:19808959), (PMID:21527504)
UniProt PMID:19808959 PMID:21527504 MGI:5285123 MGI:5285167 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573
JBrowse link
G Sox5 SRY (sex determining region Y)-box 5 enables ISO MGI
GO_Central
GO_REF:0000096 MGI:4417868 NCBI chr 6:143,774,151...144,728,008
Ensembl chr 6:143,774,151...144,727,703
JBrowse link
G Sox6 SRY (sex determining region Y)-box 6 enables ISO MGI
GO_Central
GO_REF:0000096 MGI:4417868 NCBI chr 7:115,070,107...115,639,186
Ensembl chr 7:115,070,107...115,638,031
JBrowse link
G Sox8 SRY (sex determining region Y)-box 8 enables IDA (PMID:12732652), (PMID:15102707) MGI PMID:12732652 PMID:15102707 NCBI chr17:25,784,865...25,789,666
Ensembl chr17:25,784,634...25,789,726
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 enables ISO
IDA
(PMID:10805756), (PMID:17525254), (PMID:22500632)
(MGI:5142387|PMID:10805756), (MGI:5284779|PMID:17525254), (PMID:22500632)
MGI
UniProt
GO_Central
PMID:10805756 PMID:17525254 PMID:22500632 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:5142387 MGI:5284779 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Sp1 trans-acting transcription factor 1 enables IDA (PMID:15511642), (PMID:19943855), (PMID:9705320) MGI PMID:9705320 PMID:15511642 PMID:19943855 NCBI chr15:102,314,751...102,344,839
Ensembl chr15:102,314,578...102,344,839
JBrowse link
G Sp3 trans-acting transcription factor 3 enables IDA (PMID:15511642), (PMID:19943855) MGI PMID:15511642 PMID:19943855 NCBI chr 2:72,766,774...72,810,790
Ensembl chr 2:72,766,771...72,810,790
JBrowse link
G Spi1 Spi-1 proto-oncogene enables IMP
ISO
IDA
(MGI:6269211|PMID:30413670), (MGI:6508514|PMID:30171019)
(PMID:30171019), (PMID:30413670)
(MGI:5922877|PMID:28338898), (MGI:6453080|PMID:31314592), (MGI:6459415|PMID:30718772), (MGI:6508515|PMID:30355733)
ARUK-UCL
GO_Central
MGI
PMID:28338898 PMID:30171019 PMID:30355733 PMID:30413670 PMID:30718772 More... GO_REF:0000119 MGI:4834177 MGI:5922877 MGI:6269211 MGI:6453080 MGI:6459415 MGI:6508514 MGI:6508515 NCBI chr 2:90,912,750...90,946,104
Ensembl chr 2:90,912,735...90,946,101
JBrowse link
G Srf serum response factor enables IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101
JBrowse link
G Tbx19 T-box 19 enables IDA (PMID:23070814) MGI PMID:23070814 NCBI chr 1:164,965,403...164,988,342
Ensembl chr 1:164,965,424...164,988,342
JBrowse link
G Tcf3 transcription factor 3 enables IDA (PMID:16140986) MGI PMID:16140986 NCBI chr10:80,245,375...80,269,814
Ensembl chr10:80,245,348...80,269,481
JBrowse link
G Tfap2a transcription factor AP-2, alpha enables IDA (PMID:19943855) MGI PMID:19943855 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852
JBrowse link
G Tfap2b transcription factor AP-2 beta enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 1:19,279,132...19,309,071
Ensembl chr 1:19,279,138...19,308,800
JBrowse link
G Tfcp2 transcription factor CP2 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr15:100,395,083...100,449,896
Ensembl chr15:100,395,893...100,449,889
JBrowse link
G Tfdp1 transcription factor Dp 1 enables IDA (PMID:15448153) MGI PMID:15448153 NCBI chr 8:13,388,273...13,428,448
Ensembl chr 8:13,388,751...13,428,448
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase enables ISO (PMID:23275542) MGI PMID:23275542 NCBI chr 3:65,435,868...65,462,939
Ensembl chr 3:65,435,831...65,462,939
JBrowse link
G Trp53 transformation related protein 53 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
G Tug1 taurine upregulated gene 1 enables IDA (PMID:27760051) MGI PMID:27760051 NCBI chr11:3,589,313...3,599,021
Ensembl chr11:3,589,785...3,599,673
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828
JBrowse link
G Uhrf1 ubiquitin-like, containing PHD and RING finger domains, 1 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:56,610,405...56,630,486
Ensembl chr17:56,610,321...56,630,486
JBrowse link
G Xbp1 X-box binding protein 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:5,470,641...5,475,993
Ensembl chr11:5,470,659...5,475,893
JBrowse link
G Yy1 YY1 transcription factor enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074
JBrowse link
G Yy2 Yy2 transcription factor enables IDA
ISO
(MGI:3607410|PMID:16260628)
(PMID:16260628)
UniProt
GO_Central
MGI
PMID:16260628 GO_REF:0000119 MGI:3607410 MGI:4834177 NCBI chr  X:156,349,115...156,351,981
Ensembl chr  X:156,349,115...156,351,981
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B enables IDA (PMID:8702912) MGI PMID:8702912 NCBI chr 3:89,284,953...89,300,976
Ensembl chr 3:89,284,951...89,302,083
JBrowse link
G Zfp322a zinc finger protein 322A enables IDA (MGI:6114965|PMID:24550733)
(PMID:24550733)
UniProt PMID:24550733 MGI:6114965 NCBI chr13:23,537,273...23,553,378
Ensembl chr13:23,537,273...23,553,378
JBrowse link
G Zfp395 zinc finger protein 395 enables ISO
IDA
(PMID:17693064) MGI
GO_Central
PMID:17693064 GO_REF:0000119 MGI:4834177 NCBI chr14:65,595,796...65,636,379
Ensembl chr14:65,595,838...65,636,379
JBrowse link
G Zfp516 zinc finger protein 516 enables IDA (MGI:5616937|PMID:25578880)
(PMID:25578880)
UniProt PMID:25578880 MGI:5616937 NCBI chr18:82,925,324...83,023,439
Ensembl chr18:82,928,788...83,023,439
JBrowse link
G Zfp704 zinc finger protein 704 enables IDA (PMID:17693064) MGI PMID:17693064 NCBI chr 3:9,492,070...9,675,145
Ensembl chr 3:9,492,080...9,675,145
Ensembl chr 3:9,492,080...9,675,145
JBrowse link
core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC catalytic subunit 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 4:126,328,805...126,362,500
Ensembl chr 4:126,328,805...126,362,376
JBrowse link
G Ago2 argonaute RISC catalytic subunit 2 enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr15:72,967,693...73,056,777
Ensembl chr15:72,967,693...73,056,784
JBrowse link
G Bmyc brain expressed myelocytomatosis oncogene enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:25,596,891...25,597,733
Ensembl chr 2:25,596,751...25,597,733
JBrowse link
G Drap1 DR1 associated protein 1 enables IBA GO_Central GO_REF:0000033 NCBI chr19:5,472,832...5,475,007
Ensembl chr19:5,472,833...5,475,007
JBrowse link
G Fendrr Foxf1 adjacent non-coding developmental regulatory RNA enables IDA (PMID:23369715) MGI PMID:23369715 NCBI chr 8:121,781,621...121,809,849
Ensembl chr 8:121,781,621...121,809,849
JBrowse link
G Foxp1 forkhead box P1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682
JBrowse link
G Hdac1 histone deacetylase 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506
JBrowse link
G Isl1 ISL1 transcription factor, LIM/homeodomain enables ISO RGD
GO_Central
MGI
PMID:11043578 GO_REF:0000096 MGI:4417868 RGD:8554127 NCBI chr13:116,434,806...116,446,224
Ensembl chr13:116,434,817...116,446,225
JBrowse link
G Jph2 junctophilin 2 enables IDA (MGI:6270069|PMID:30409805) UniProt PMID:30409805 MGI:6270069 NCBI chr 2:163,178,162...163,239,969
Ensembl chr 2:163,178,162...163,239,913
JBrowse link
G Kcnip3 Kv channel interacting protein 3, calsenilin enables IMP (MGI:5882899|PMID:15746104)
(PMID:15746104)
CAFA PMID:15746104 MGI:5882899 NCBI chr 2:127,298,418...127,364,014
Ensembl chr 2:127,298,418...127,364,014
JBrowse link
G Klf10 Kruppel-like transcription factor 10 enables IDA (MGI:4438787|PMID:20070857)
(PMID:20070857)
UniProt PMID:20070857 MGI:4438787 NCBI chr15:38,291,702...38,300,950
Ensembl chr15:38,291,707...38,300,950
JBrowse link
G Mmp12 matrix metallopeptidase 12 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 9:7,344,397...7,360,461
Ensembl chr 9:7,344,381...7,369,499
JBrowse link
G Myc myelocytomatosis oncogene enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223
JBrowse link
G Nkx2-1 NK2 homeobox 1 enables ISO MGI
GO_Central
GO_REF:0000096 MGI:4417868 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693
JBrowse link
G Npm1 nucleophosmin 1 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:33,102,498...33,114,143
Ensembl chr11:33,102,287...33,113,206
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 enables ISO
IEA
MGI
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr18:39,543,598...39,652,485
Ensembl chr18:39,543,598...39,652,474
JBrowse link
G Polr2a polymerase (RNA) II (DNA directed) polypeptide A enables IDA (MGI:5428344|PMID:22723415)
(PMID:22723415)
BHF-UCL PMID:22723415 MGI:5428344 NCBI chr11:69,624,823...69,649,459
Ensembl chr11:69,624,823...69,649,463
JBrowse link
G Snapc3 small nuclear RNA activating complex, polypeptide 3 contributes_to IBA GO_Central GO_REF:0000033 NCBI chr 4:83,333,948...83,391,256
Ensembl chr 4:83,335,961...83,385,913
JBrowse link
G Taf4 TATA-box binding protein associated factor 4 contributes_to ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:179,553,945...179,618,519
Ensembl chr 2:179,553,945...179,618,439
JBrowse link
G Tbp TATA box binding protein enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:15,720,150...15,737,689
Ensembl chr17:15,720,150...15,748,641
JBrowse link
G Trp53 transformation related protein 53 enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 4:141,171,984...141,195,248
Ensembl chr 4:141,171,965...141,195,241
JBrowse link
E-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl-hydrocarbon receptor enables IDA (MGI:4820700|PMID:20106950)
(PMID:20106950)
UniProt PMID:20106950 MGI:4820700 NCBI chr12:35,547,978...35,584,988
Ensembl chr12:35,547,973...35,585,037
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO
IEA
MGI
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 7:142,520,559...142,523,001
Ensembl chr 7:142,520,566...142,523,001
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables IBA GO_Central GO_REF:0000033 NCBI chr 6:64,706,109...64,708,229
Ensembl chr 6:64,706,109...64,708,229
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 enables IBA GO_Central GO_REF:0000033 NCBI chr10:62,935,564...62,937,059
Ensembl chr10:62,935,430...62,937,058
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:72,183,158...72,212,765
Ensembl chr 6:72,183,161...72,212,561
JBrowse link
G Bhlha15 basic helix-loop-helix family, member a15 enables IBA GO_Central GO_REF:0000033 NCBI chr 5:144,127,104...144,131,259
Ensembl chr 5:144,127,104...144,131,259
JBrowse link
G Bhlhe22 basic helix-loop-helix family, member e22 enables IBA GO_Central GO_REF:0000033 NCBI chr 3:18,108,489...18,111,678
Ensembl chr 3:18,108,338...18,111,681
JBrowse link
G Bhlhe23 basic helix-loop-helix family, member e23 enables IBA GO_Central GO_REF:0000033 NCBI chr 2:180,416,174...180,418,693
Ensembl chr 2:180,416,174...180,418,693
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 enables IDA
ISO
(MGI:2388855|PMID:12397359), (MGI:5297789|PMID:15147242), (MGI:5306297|PMID:17487425), (MGI:6282958|PMID:30012868)
(PMID:12397359), (PMID:15147242), (PMID:17487425), (PMID:30012868)
UniProt
MGI
PMID:12397359 PMID:15147242 PMID:17487425 PMID:30012868 GO_REF:0000119 MGI:2388855 MGI:4834177 MGI:5297789 MGI:5306297 MGI:6282958 NCBI chr 6:108,637,590...108,643,886
Ensembl chr 6:108,637,590...108,643,886
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 enables IDA
ISO
(MGI:2388855|PMID:12397359), (MGI:5297789|PMID:15147242), (MGI:5297791|PMID:12657651), (MGI:5306297|PMID:17487425) BHF-UCL
MGI
PMID:12397359 PMID:12657651 PMID:15147242 PMID:17487425 GO_REF:0000119 MGI:2388855 MGI:4834177 MGI:5297789 MGI:5297791 MGI:5306297 NCBI chr 6:145,803,969...145,811,146
Ensembl chr 6:145,803,969...145,811,284
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables IDA
ISO
(MGI:4410413|PMID:19605937), (MGI:4820700|PMID:20106950), (MGI:5568140|PMID:24736997)
(PMID:19605937), (PMID:20106950), (PMID:24736997)
UniProt
MGI
GO_Central
PMID:19605937 PMID:20106950 PMID:24736997 GO_REF:0000119 MGI:4410413 MGI:4820700 MGI:4834177 MGI:5568140 NCBI chr 7:112,777,820...112,913,333
Ensembl chr 7:112,806,672...112,913,333
JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 enables IDA
ISO
(MGI:4410413|PMID:19605937)
(PMID:19605937)
UniProt
GO_Central
MGI
PMID:19605937 GO_REF:0000119 MGI:4410413 MGI:4834177 NCBI chr 6:146,696,230...146,735,027
Ensembl chr 6:146,697,553...146,735,027
JBrowse link
G Bmyc brain expressed myelocytomatosis oncogene enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:25,596,891...25,597,733
Ensembl chr 2:25,596,751...25,597,733
JBrowse link
G Ciart circadian associated repressor of transcription enables IDA (MGI:5568140|PMID:24736997)
(PMID:24736997)
UniProt PMID:24736997 MGI:5568140 NCBI chr 3:95,785,812...95,790,012
Ensembl chr 3:95,785,815...95,789,563
JBrowse link
G Clock clock circadian regulator enables IDA
IBA
ISO
(MGI:4410413|PMID:19605937), (MGI:4820700|PMID:20106950), (MGI:4837055|PMID:20430893), (MGI:5553247|PMID:12738229), (MGI:6282958|PMID:30012868)
(PMID:12738229), (PMID:19605937), (PMID:20106950), (PMID:20430893), (PMID:30012868)
UniProt
GO_Central
MGI
PMID:12738229 PMID:19605937 PMID:20106950 PMID:20430893 PMID:30012868 GO_REF:0000033 GO_REF:0000119 MGI:4410413 MGI:4820700 MGI:4834177 MGI:4837055 MGI:5553247 MGI:6282958 NCBI chr 5:76,357,715...76,452,675
Ensembl chr 5:76,357,715...76,452,639
JBrowse link
G Cry1 cryptochrome circadian regulator 1 enables IDA (MGI:5009503|PMID:19129230), (MGI:5292598|PMID:21768648), (MGI:5464222|PMID:23133559), (MGI:5545849|PMID:24385426)
(PMID:19129230), (PMID:21768648), (PMID:23133559), (PMID:24385426)
UniProt PMID:19129230 PMID:21768648 PMID:23133559 PMID:24385426 MGI:5009503 MGI:5292598 MGI:5464222 MGI:5545849 NCBI chr10:84,967,564...85,020,918
Ensembl chr10:84,967,564...85,020,928
JBrowse link
G Figla folliculogenesis specific basic helix-loop-helix contributes_to
enables
ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 6:85,993,476...85,997,978
Ensembl chr 6:85,993,153...85,997,978
JBrowse link
G Gata3 GATA binding protein 3 enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 contributes_to
enables
IDA
ISO
(MGI:4362015|PMID:11812799)
(PMID:11812799)
(PMID:20144608)
BHF-UCL
GO_Central
MGI
PMID:11812799 PMID:20144608 GO_REF:0000119 MGI:4362015 MGI:4834177 NCBI chr 8:57,774,018...57,777,552
Ensembl chr 8:57,774,018...57,777,668
JBrowse link
G Hdac1 histone deacetylase 1 enables IDA (MGI:5568140|PMID:24736997)
(PMID:24736997)
UniProt PMID:24736997 MGI:5568140 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506
JBrowse link
G Hes1 hes family bHLH transcription factor 1 enables ISO
IBA
IDA
(MGI:1859234|PMID:10851137) MGI
GO_Central
RGD
ARUK-UCL
PMID:10851137 PMID:19670267 GO_REF:0000033 GO_REF:0000096 MGI:1859234 MGI:4417868 RGD:9685170 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614
JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit enables IMP (MGI:5528778|PMID:24011070)
(PMID:24011070)
BHF-UCL PMID:24011070 MGI:5528778 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304
JBrowse link
G Max Max protein enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr12:76,984,045...77,009,123
Ensembl chr12:76,984,043...77,008,975
JBrowse link
G Mitf melanogenesis associated transcription factor enables IDA
ISO
(MGI:5461240|PMID:23207919)
(PMID:23207919)
UniProt
MGI
PMID:23207919 GO_REF:0000119 MGI:4834177 MGI:5461240 NCBI chr 6:97,783,966...97,998,321
Ensembl chr 6:97,784,013...97,998,310
JBrowse link
G Mybbp1a MYB binding protein (P160) 1a enables IPI (MGI:5009503|PMID:19129230)
(PMID:19129230)
UniProt PMID:19129230 MGI:5009503 NCBI chr11:72,332,153...72,342,596
Ensembl chr11:72,332,181...72,342,594
JBrowse link
G Myc myelocytomatosis oncogene enables ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223
JBrowse link
G Myod1 myogenic differentiation 1 enables IDA
ISO
(MGI:1934945|PMID:10652346), (MGI:5508271|PMID:15706034)
(PMID:10652346), (PMID:15706034)
UniProt
GO_Central
RGD
MGI
PMID:10652346 PMID:11600477 PMID:15706034 GO_REF:0000096 MGI:1934945 MGI:4417868 MGI:5508271 RGD:9686083 NCBI chr 7:46,025,898...46,028,516
Ensembl chr 7:46,025,898...46,028,523
JBrowse link
G Myog myogenin enables IDA (MGI:5009475|PMID:19783823), (MGI:5508271|PMID:15706034), (MGI:5526919|PMID:22847234) UniProt PMID:15706034 PMID:19783823 PMID:22847234 MGI:5009475 MGI:5508271 MGI:5526919 NCBI chr 1:134,217,742...134,220,286
Ensembl chr 1:134,217,727...134,220,286
JBrowse link
G Neurod1 neurogenic differentiation 1 enables IDA
IBA
ISO
(MGI:2686763|PMID:14697366)
(PMID:14697366)
UniProt
GO_Central
MGI
PMID:14697366 GO_REF:0000033 GO_REF:0000119 MGI:2686763 MGI:4834177 NCBI chr 2:79,282,981...79,286,980
Ensembl chr 2:79,282,865...79,287,095
JBrowse link
G Neurod2 neurogenic differentiation 2 enables IDA
IBA
(MGI:2686763|PMID:14697366), (MGI:3789797|PMID:18214987)
(PMID:14697366), (PMID:18214987)
UniProt
GO_Central
PMID:14697366 PMID:18214987 GO_REF:0000033 MGI:2686763 MGI:3789797 NCBI chr11:98,216,241...98,220,471
Ensembl chr11:98,216,241...98,220,474
JBrowse link
G Neurod4 neurogenic differentiation 4 enables IBA GO_Central GO_REF:0000033 NCBI chr10:130,104,021...130,116,123
Ensembl chr10:130,104,021...130,116,109
JBrowse link
G Neurod6 neurogenic differentiation 6 enables IBA GO_Central GO_REF:0000033 NCBI chr 6:55,654,803...55,658,248
Ensembl chr 6:55,654,807...55,658,248
JBrowse link
G Neurog1 neurogenin 1 enables IDA
IBA
ISO
(MGI:2686763|PMID:14697366)
(PMID:14697366)
UniProt
GO_Central
MGI
PMID:14697366 GO_REF:0000033 GO_REF:0000119 MGI:2686763 MGI:4834177 NCBI chr13:56,398,291...56,399,993
Ensembl chr13:56,398,291...56,399,976
JBrowse link
G Neurog2 neurogenin 2 enables IDA
IBA
(MGI:2686763|PMID:14697366)
(PMID:14697366)
UniProt
GO_Central
PMID:14697366 GO_REF:0000033 MGI:2686763 NCBI chr 3:127,426,382...127,429,285
Ensembl chr 3:127,426,784...127,429,280
JBrowse link
G Neurog3 neurogenin 3 enables IBA GO_Central GO_REF:0000033 NCBI chr10:61,968,869...61,970,542
Ensembl chr10:61,968,869...61,970,542
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 enables IDA (MGI:3819720|PMID:18565334) UniProt PMID:18565334 MGI:3819720 NCBI chr11:98,658,758...98,666,233
Ensembl chr11:98,658,758...98,666,159
JBrowse link
G Olig1 oligodendrocyte transcription factor 1 enables IBA GO_Central GO_REF:0000033 NCBI chr16:91,066,657...91,068,827
Ensembl chr16:91,066,660...91,068,821
JBrowse link
G Olig2 oligodendrocyte transcription factor 2 enables IBA GO_Central GO_REF:0000033 NCBI chr16:91,016,745...91,025,567
Ensembl chr16:91,022,345...91,025,565
JBrowse link
G Olig3 oligodendrocyte transcription factor 3 enables IBA GO_Central GO_REF:0000033 NCBI chr10:19,232,287...19,234,352
Ensembl chr10:19,232,281...19,234,352
JBrowse link
G Per1 period circadian clock 1 enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr11:68,985,934...69,000,791
Ensembl chr11:68,986,043...69,000,786
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma enables IDA (MGI:3830801|PMID:19041764)
(PMID:19041764)
UniProt PMID:19041764 MGI:3830801 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Prmt5 protein arginine N-methyltransferase 5 enables IDA (MGI:5464222|PMID:23133559) UniProt PMID:23133559 MGI:5464222 NCBI chr14:54,744,639...54,754,927
Ensembl chr14:54,744,644...54,754,982
JBrowse link
G Ptf1a pancreas specific transcription factor, 1a enables IDA (PMID:22232429) MGI PMID:22232429 NCBI chr 2:19,450,474...19,452,312
Ensembl chr 2:19,450,474...19,452,312
JBrowse link
G Scx scleraxis scleraxis bHLH transcription factor contributes_to
enables
IDA
ISO
(MGI:5294531|PMID:19828133)
(PMID:20059955), (PMID:7743923)
(PMID:19828133)
(MGI:4418577|PMID:20059955), (MGI:72077|PMID:7743923)
UniProt
GO_Central
MGI
PMID:7743923 PMID:19828133 PMID:20059955 GO_REF:0000119 MGI:4418577 MGI:4834177 MGI:5294531 MGI:72077 NCBI chr15:76,341,594...76,343,668
Ensembl chr15:76,341,652...76,343,658
JBrowse link
G Snai1 snail family zinc finger 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:167,380,115...167,384,734
Ensembl chr 2:167,380,115...167,384,734
JBrowse link
G Snai2 snail family zinc finger 2 enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr16:14,523,716...14,527,259
Ensembl chr16:14,523,716...14,527,249
JBrowse link
G Spz1 spermatogenic leucine zipper 1 enables IDA (PMID:30541061) MGI PMID:30541061 NCBI chr13:92,711,139...92,712,740
Ensembl chr13:92,711,144...92,712,680
JBrowse link
G Srebf2 sterol regulatory element binding factor 2 enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr15:82,031,455...82,089,580
Ensembl chr15:82,031,382...82,089,580
JBrowse link
G Tal1 T cell acute lymphocytic leukemia 1 enables ISO
IDA
(PMID:18550854) MGI
GO_Central
PMID:18550854 GO_REF:0000119 MGI:4834177 NCBI chr 4:114,913,623...114,928,952
Ensembl chr 4:114,913,623...114,928,952
JBrowse link
G Tcf12 transcription factor 12 enables IDA (MGI:3789797|PMID:18214987) UniProt PMID:18214987 MGI:3789797 NCBI chr 9:71,751,534...72,019,611
Ensembl chr 9:71,749,970...72,019,153
JBrowse link
G Tcf15 transcription factor 15 enables IDA (MGI:6508495|PMID:15226298) UniProt PMID:15226298 MGI:6508495 NCBI chr 2:151,984,973...151,991,017
Ensembl chr 2:151,985,481...151,991,017
JBrowse link
G Tcf21 transcription factor 21 enables IDA
IPI
(MGI:3588448|PMID:15919722)
(PMID:15919722)
(MGI:1203942|PMID:9545521)
BHF-UCL
UniProt
PMID:9545521 PMID:15919722 MGI:1203942 MGI:3588448 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073
JBrowse link
G Tcf3 transcription factor 3 contributes_to
enables
IDA
ISO
IPI
(MGI:4362015|PMID:11812799)
(PMID:15226298), (PMID:18214987), (PMID:30541061)
(PMID:11812799)
(MGI:3789797|PMID:18214987), (MGI:6508495|PMID:15226298), (PMID:30541061)
(MGI:1203942|PMID:9545521)
BHF-UCL
UniProt
GO_Central
MGI
PMID:9545521 PMID:11812799 PMID:15226298 PMID:18214987 PMID:30541061 GO_REF:0000096 GO_REF:0000119 MGI:1203942 MGI:3789797 MGI:4362015 MGI:4417868 MGI:4834177 MGI:6508495 NCBI chr10:80,245,375...80,269,814
Ensembl chr10:80,245,348...80,269,481
JBrowse link
G Tcf4 transcription factor 4 enables IDA (MGI:3789797|PMID:18214987), (MGI:85411|PMID:8978694)
(PMID:18214987), (PMID:8978694)
BHF-UCL
UniProt
PMID:8978694 PMID:18214987 MGI:3789797 MGI:85411 NCBI chr18:69,476,500...69,821,038
Ensembl chr18:69,476,427...69,822,150
JBrowse link
G Tfap4 transcription factor AP4 enables IDA
ISO
IBA
(MGI:4456960|PMID:11171123) UniProt
GO_Central
MGI
PMID:11171123 GO_REF:0000033 GO_REF:0000119 MGI:4456960 MGI:4834177 NCBI chr16:4,362,525...4,378,625
Ensembl chr16:4,362,525...4,377,718
JBrowse link
G Tfe3 transcription factor E3 enables IDA (MGI:7510300|PMID:20713358) UniProt PMID:20713358 MGI:7510300 NCBI chr  X:7,628,769...7,641,441
Ensembl chr  X:7,628,799...7,641,441
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 enables TAS
IMP
ISO
IDA
(MGI:5306328|PMID:11001584)
(PMID:24011070)
(PMID:11001584)
(MGI:3623529|PMID:16502419), (MGI:4838344|PMID:20804746)
(MGI:5528778|PMID:24011070)
BHF-UCL
GO_Central
MGI
PMID:11001584 PMID:16502419 PMID:20804746 PMID:24011070 GO_REF:0000119 MGI:3623529 MGI:4834177 MGI:4838344 MGI:5306328 MGI:5528778 NCBI chr12:34,007,670...34,009,830
Ensembl chr12:34,007,670...34,009,828
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 enables IDA (MGI:4830798|PMID:20346398), (MGI:7510300|PMID:20713358)
(PMID:20346398), (PMID:20713358)
UniProt PMID:20346398 PMID:20713358 MGI:4830798 MGI:7510300 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467
JBrowse link
estrogen response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor enables IBA GO_Central GO_REF:0000033 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821
JBrowse link
G Esr1 estrogen receptor 1 (alpha) enables ISO
IBA
IEA
MGI
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614
JBrowse link
G Esr2 estrogen receptor 2 (beta) enables ISO
IBA
MGI
GO_Central
RGD
PMID:9600083 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:728646 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033
JBrowse link
G Esrra estrogen related receptor, alpha enables IBA GO_Central GO_REF:0000033 NCBI chr19:6,888,345...6,899,182
Ensembl chr19:6,888,345...6,899,208
JBrowse link
G Esrrb estrogen related receptor, beta enables IBA GO_Central GO_REF:0000033 NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402
JBrowse link
G Esrrg estrogen-related receptor gamma enables IDA
IBA
(MGI:1342114|PMID:10428842) UniProt
GO_Central
PMID:10428842 GO_REF:0000033 MGI:1342114 NCBI chr 1:187,340,707...187,947,082
Ensembl chr 1:187,340,988...187,947,082
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 enables IBA GO_Central GO_REF:0000033 NCBI chr18:39,543,598...39,652,485
Ensembl chr18:39,543,598...39,652,474
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 enables IBA GO_Central GO_REF:0000033 NCBI chr 8:77,626,422...77,971,641
Ensembl chr 8:77,626,070...77,971,641
JBrowse link
G Nr6a1 nuclear receptor subfamily 6, group A, member 1 enables IBA GO_Central GO_REF:0000033 NCBI chr 2:38,613,381...38,816,464
Ensembl chr 2:38,613,382...38,817,700
JBrowse link
G Pgr progesterone receptor enables IBA GO_Central GO_REF:0000033 NCBI chr 9:8,890,017...8,968,612
Ensembl chr 9:8,899,834...8,968,612
JBrowse link
G Trim24 tripartite motif-containing 24 enables ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 6:37,846,816...37,945,380
Ensembl chr 6:37,847,746...37,943,231
JBrowse link
intronic transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 B cell leukemia/lymphoma 6 enables IDA (PMID:24863065) MGI PMID:24863065 NCBI chr16:23,780,058...23,807,602
Ensembl chr16:23,783,802...23,807,602
JBrowse link
G Grhl2 grainyhead like transcription factor 2 enables IDA (MGI:4867118|PMID:20978075) UniProt PMID:20978075 MGI:4867118 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813
JBrowse link
G Nkx2-1 NK2 homeobox 1 enables IDA
ISO
(MGI:5613464|PMID:22955271)
(PMID:22955271)
(PMID:23143308)
UniProt
MGI
PMID:22955271 PMID:23143308 MGI:5613464 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693
JBrowse link
G Thra thyroid hormone receptor alpha enables ISO MGI
GO_Central
RGD
PMID:20368265 GO_REF:0000096 MGI:4417868 RGD:2324624 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832
JBrowse link
mitochondrial promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp1 lon peptidase 1, mitochondrial NOT|enables IDA (PMID:12657466) MGI PMID:12657466 NCBI chr17:56,921,297...56,933,903
Ensembl chr17:56,921,297...56,933,887
JBrowse link
G Polrmt polymerase (RNA) mitochondrial (DNA directed) enables IBA GO_Central GO_REF:0000033 NCBI chr10:79,571,951...79,582,436
Ensembl chr10:79,571,957...79,582,415
JBrowse link
G Tfam transcription factor A, mitochondrial enables ISO
ISS
IDA
(PMID:2628167) MGI
GO_Central
UniProt
PMID:2628167 GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr10:71,061,298...71,074,157
Ensembl chr10:71,061,294...71,074,110
JBrowse link
N-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hes1 hes family bHLH transcription factor 1 enables IDA
ISO
IBA
(MGI:1859234|PMID:10851137), (MGI:4821067|PMID:17681138) UniProt
MGI
RGD
GO_Central
PMID:10851137 PMID:17681138 PMID:22302822 GO_REF:0000033 GO_REF:0000096 MGI:1859234 MGI:4417868 MGI:4821067 RGD:9685391 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614
JBrowse link
purine-rich negative regulatory element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elk3 ELK3, member of ETS oncogene family enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr10:93,083,277...93,147,021
Ensembl chr10:93,083,276...93,146,997
JBrowse link
G Pura purine rich element binding protein A enables IDA
IBA
(MGI:3688338|PMID:12933792) HGNC-UCL
GO_Central
PMID:12933792 GO_REF:0000033 MGI:3688338 NCBI chr18:36,413,614...36,434,575
Ensembl chr18:36,414,150...36,425,588
JBrowse link
G Purb purine rich element binding protein B enables ISO
IBA
IEA
MGI
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr11:6,417,599...6,426,076
Ensembl chr11:6,417,599...6,425,917
JBrowse link
G Purg purine-rich element binding protein G enables IBA
IEA
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 NCBI chr 8:33,875,650...33,907,500
Ensembl chr 8:33,876,353...33,907,495
JBrowse link
retinoic acid-responsive element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myt1l myelin transcription factor 1-like enables ISO MGI
GO_Central
RGD
PMID:8631881 GO_REF:0000096 MGI:4417868 RGD:633486 NCBI chr12:29,578,375...29,973,215
Ensembl chr12:29,578,383...29,973,212
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 enables ISO RGD
MGI
PMID:7797489 GO_REF:0000096 MGI:4417868 RGD:633499 NCBI chr13:78,337,090...78,346,954
Ensembl chr13:78,337,092...78,347,876
JBrowse link
G Rara retinoic acid receptor, alpha enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768
JBrowse link
G Rxra retinoid X receptor alpha enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:27,566,457...27,653,331
Ensembl chr 2:27,566,452...27,652,969
JBrowse link
G Rxrb retinoid X receptor beta enables IBA GO_Central GO_REF:0000033 NCBI chr17:34,250,786...34,257,377
Ensembl chr17:34,250,786...34,257,373
JBrowse link
G Rxrg retinoid X receptor gamma enables IBA GO_Central GO_REF:0000033 NCBI chr 1:167,425,902...167,467,191
Ensembl chr 1:167,425,953...167,467,192
JBrowse link
G Zfp536 zinc finger protein 536 enables IDA (PMID:19398580) MGI PMID:19398580 NCBI chr 7:37,017,448...37,473,733
Ensembl chr 7:37,017,449...37,473,066
JBrowse link
RNA polymerase I cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pih1d1 PIH1 domain containing 1 NOT|enables ISO (PMID:22368283) UniProt PMID:22368283 NCBI chr 7:44,800,036...44,809,489
Ensembl chr 7:44,803,727...44,809,489
JBrowse link
G Ubtf upstream binding transcription factor, RNA polymerase I enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:102,195,393...102,214,738
Ensembl chr11:102,195,386...102,210,568
JBrowse link
RNA polymerase I core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz2a bromodomain adjacent to zinc finger domain, 2A contributes_to ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:127,927,453...127,965,172
Ensembl chr10:127,927,446...127,965,172
JBrowse link
G Rrn3 RRN3 RNA polymerase I transcription factor homolog (yeast) enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr16:13,598,563...13,632,705
Ensembl chr16:13,598,572...13,632,703
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 contributes_to ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 contributes_to ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:75,732,603...75,757,448
Ensembl chr10:75,732,603...75,757,451
JBrowse link
G Taf1b TATA-box binding protein associated factor, RNA polymerase I, B enables ISO
ISS
IBA
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr12:24,548,580...24,608,570
Ensembl chr12:24,548,358...24,608,538
JBrowse link
G Taf1c TATA-box binding protein associated factor, RNA polymerase I, C enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:120,324,713...120,331,945
Ensembl chr 8:120,324,610...120,331,961
JBrowse link
G Tbp TATA box binding protein enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:15,720,150...15,737,689
Ensembl chr17:15,720,150...15,748,641
JBrowse link
G Ubtf upstream binding transcription factor, RNA polymerase I enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:102,195,393...102,214,738
Ensembl chr11:102,195,386...102,210,568
JBrowse link
G Ubtfl1 upstream binding transcription factor, RNA polymerase I-like 1 enables IBA GO_Central GO_REF:0000033 NCBI chr 9:18,315,714...18,322,798
Ensembl chr 9:18,315,714...18,324,473
JBrowse link
RNA polymerase I transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpa CCAAT/enhancer binding protein alpha enables ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 7:34,818,718...34,821,353
Ensembl chr 7:34,818,718...34,821,353
JBrowse link
RNA polymerase II cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 2010315B03Rik RIKEN cDNA 2010315B03 gene enables IBA GO_Central GO_REF:0000033 NCBI chr 9:124,054,432...124,075,349
Ensembl chr 9:124,054,434...124,075,326
JBrowse link
G 2610021A01Rik RIKEN cDNA 2610021A01 gene enables IBA GO_Central GO_REF:0000033 Ensembl chr 7:41,248,654...41,277,957 JBrowse link
G 4930522L14Rik RIKEN cDNA 4930522L14 gene enables IBA GO_Central GO_REF:0000033 NCBI chr 5:109,845,026...109,899,559
Ensembl chr 5:109,883,856...109,899,752
Ensembl chr 5:109,883,856...109,899,752
JBrowse link
G 5730507C01Rik RIKEN cDNA 5730507C01 gene enables IBA GO_Central GO_REF:0000033 NCBI chr12:18,564,441...18,588,211
Ensembl chr12:18,564,511...18,585,255
JBrowse link
G Ago1 argonaute RISC catalytic subunit 1 enables IDA (PMID:22053081) MGI PMID:22053081 NCBI chr 4:126,328,805...126,362,500
Ensembl chr 4:126,328,805...126,362,376
JBrowse link
G AI854703 expressed sequence AI854703 enables IBA GO_Central GO_REF:0000033 NCBI chr 6:48,603,973...48,610,625
Ensembl chr 6:48,603,698...48,610,623
JBrowse link
G App amyloid beta precursor protein enables IDA (PMID:15944124) MGI PMID:15944124 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654
JBrowse link
G Ar androgen receptor enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821
JBrowse link
G Arid3c AT-rich interaction domain 3C enables IDA (MGI:5295129|PMID:21955986) NTNU_SB PMID:21955986 MGI:5295129 NCBI chr 4:41,723,830...41,731,226
Ensembl chr 4:41,723,836...41,731,142
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator enables IGI
IBA
(PMID:9113979)
(PMID:9000051)
MGI
GO_Central
PMID:9000051 PMID:9113979 GO_REF:0000033 NCBI chr 3:95,341,674...95,404,551
Ensembl chr 3:95,341,699...95,404,551
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 enables IDA
IBA
(MGI:79449|PMID:8657146), (PMID:14701734) MGI
GO_Central
PMID:8657146 PMID:14701734 GO_REF:0000033 MGI:79449 NCBI chr 7:83,895,486...84,059,201
Ensembl chr 7:83,895,486...84,059,384
JBrowse link
G Arx aristaless related homeobox enables IDA
ISO
(MGI:3579957|PMID:15930104) NTNU_SB
GO_Central
MGI
PMID:15930104 GO_REF:0000119 MGI:3579957 MGI:4834177 NCBI chr  X:92,330,113...92,341,963
Ensembl chr  X:92,330,051...92,341,963
JBrowse link
G Ascl1 achaete-scute family bHLH transcription factor 1 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:87,326,681...87,329,522
Ensembl chr10:87,326,681...87,329,522
JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 7:142,520,559...142,523,001
Ensembl chr 7:142,520,566...142,523,001
JBrowse link
G Ascl5 achaete-scute family bHLH transcription factor 5 enables IMP (MGI:6359291|PMID:30426815)
(PMID:30426815)
UniProt PMID:30426815 MGI:6359291 NCBI chr 1:135,978,321...135,979,810
Ensembl chr 1:135,978,542...135,979,108
JBrowse link
G Atf1 activating transcription factor 1 enables IBA GO_Central GO_REF:0000033 NCBI chr15:100,125,729...100,159,129
Ensembl chr15:100,125,700...100,159,125
JBrowse link
G Atf2 activating transcription factor 2 enables ISO
IDA
(PMID:16405968) MGI
GO_Central
PMID:16405968 GO_REF:0000119 MGI:4834177 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983
JBrowse link
G Atf3 activating transcription factor 3 enables IDA
ISO
IBA
(MGI:3624470|PMID:16644691)
(PMID:16644691)
NTNU_SB
GO_Central
MGI
PMID:16644691 GO_REF:0000033 GO_REF:0000096 MGI:3624470 MGI:4417868 NCBI chr 1:190,902,493...190,915,530
Ensembl chr 1:190,902,493...190,950,236
JBrowse link
G Atf4 activating transcription factor 4 enables
contributes_to
IMP
IDA
(MGI:5572880|PMID:15788408)
(PMID:12749859), (PMID:15724149), (PMID:21768648), (PMID:27812542)
(PMID:15788408)
(MGI:5292598|PMID:21768648), (PMID:12749859), (PMID:15724149), (PMID:27812542)
(PMID:27812542)
NTNU_SB
MGI
PMID:12749859 PMID:15724149 PMID:15788408 PMID:21768648 PMID:27812542 MGI:5292598 MGI:5572880 NCBI chr15:80,139,385...80,141,746
Ensembl chr15:80,139,385...80,141,742
JBrowse link
G Atf6 activating transcription factor 6 enables ISO
IEA
IBA
MGI
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 1:170,532,026...170,696,414
Ensembl chr 1:170,532,243...170,695,340
JBrowse link
G Atf6b activating transcription factor 6 beta contributes_to
enables
ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:34,866,120...34,874,048
Ensembl chr17:34,866,120...34,874,048
JBrowse link
G Atf7 activating transcription factor 7 enables ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:102,434,381...102,533,899
Ensembl chr15:102,434,381...102,533,899
JBrowse link
G Atoh1 atonal bHLH transcription factor 1 enables IDA (MGI:5574303|PMID:17826772)
(PMID:17826772)
NTNU_SB PMID:17826772 MGI:5574303 NCBI chr 6:64,706,109...64,708,229
Ensembl chr 6:64,706,109...64,708,229
JBrowse link
G B020011L13Rik RIKEN cDNA B020011L13 gene enables IBA GO_Central GO_REF:0000033 NCBI chr 1:117,708,865...117,731,089
Ensembl chr 1:117,708,863...117,731,089
JBrowse link
G Bach1 BTB and CNC homology 1, basic leucine zipper transcription factor 1 enables IDA
IBA
(MGI:894637|PMID:8887638)
(PMID:8887638)
NTNU_SB
GO_Central
PMID:8887638 GO_REF:0000033 MGI:894637 NCBI chr16:87,495,842...87,530,234
Ensembl chr16:87,495,833...87,530,234
JBrowse link
G Bach2 BTB and CNC homology, basic leucine zipper transcription factor 2 enables IDA
IBA
(MGI:894637|PMID:8887638)
(PMID:8887638)
NTNU_SB
GO_Central
PMID:8887638 GO_REF:0000033 MGI:894637 NCBI chr 4:32,238,413...32,586,109
Ensembl chr 4:32,238,804...32,586,108
JBrowse link
G Batf basic leucine zipper transcription factor, ATF-like enables IDA
IBA
(MGI:5448096|PMID:22983707)
(PMID:22983707)
NTNU_SB
GO_Central
PMID:22983707 GO_REF:0000033 MGI:5448096 NCBI chr12:85,733,494...85,755,861
Ensembl chr12:85,733,443...85,755,861
JBrowse link
G Batf2 basic leucine zipper transcription factor, ATF-like 2 enables IBA GO_Central GO_REF:0000033 NCBI chr19:6,214,424...6,222,506
Ensembl chr19:6,191,013...6,222,506
JBrowse link
G Batf3 basic leucine zipper transcription factor, ATF-like 3 enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:190,830,611...190,841,140
Ensembl chr 1:190,830,044...190,841,142
JBrowse link
G BC024063 cDNA sequence BC024063 enables IBA GO_Central GO_REF:0000033 NCBI chr10:81,919,154...81,948,967
Ensembl chr10:81,919,187...81,947,050
JBrowse link
G Bcl11a BCL11 transcription factor A enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:24,026,498...24,123,558
Ensembl chr11:24,028,056...24,124,123
JBrowse link
G Bcl11b B cell leukemia/lymphoma 11B enables IBA
IDA
(PMID:16809611) GO_Central
MGI
PMID:16809611 GO_REF:0000033 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861
JBrowse link
G Bcl6 B cell leukemia/lymphoma 6 enables IBA
IDA
(PMID:10490661), (PMID:15611242), (PMID:9110977) GO_Central
MGI
PMID:9110977 PMID:10490661 PMID:15611242 GO_REF:0000033 NCBI chr16:23,780,058...23,807,602
Ensembl chr16:23,783,802...23,807,602
JBrowse link
G Bcl6b B cell CLL/lymphoma 6, member B enables IBA GO_Central GO_REF:0000033 NCBI chr11:70,114,953...70,120,624
Ensembl chr11:70,114,954...70,120,624
JBrowse link
G Bhlhe40 basic helix-loop-helix family, member e40 enables IDA
IBA
(MGI:5297789|PMID:15147242)
(PMID:15147242)
BHF-UCL
GO_Central
PMID:15147242 GO_REF:0000033 MGI:5297789 NCBI chr 6:108,637,590...108,643,886
Ensembl chr 6:108,637,590...108,643,886
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 enables IDA
IBA
(MGI:5297789|PMID:15147242), (MGI:5297791|PMID:12657651) BHF-UCL
GO_Central
PMID:12657651 PMID:15147242 GO_REF:0000033 MGI:5297789 MGI:5297791 NCBI chr 6:145,803,969...145,811,146
Ensembl chr 6:145,803,969...145,811,284
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 enables IDA
IBA
(MGI:5292598|PMID:21768648), (MGI:5297789|PMID:15147242), (MGI:5511073|PMID:24043798), (MGI:5545849|PMID:24385426), (MGI:5574290|PMID:22894897), (MGI:5582861|PMID:24089055), (MGI:5607228|PMID:21113167), (MGI:5613453|PMID:24051492)
(PMID:15147242), (PMID:21113167), (PMID:21768648), (PMID:22894897), (PMID:24043798), (PMID:24051492), (PMID:24089055), (PMID:24385426)
UniProt
GO_Central
PMID:15147242 PMID:21113167 PMID:21768648 PMID:22894897 PMID:24043798 More... GO_REF:0000033 MGI:5292598 MGI:5297789 MGI:5511073 MGI:5545849 MGI:5574290 MGI:5582861 MGI:5607228 MGI:5613453 NCBI chr 7:112,777,820...112,913,333
Ensembl chr 7:112,806,672...112,913,333
JBrowse link
G Bmal2 basic helix-loop-helix ARNT like 2 enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:146,696,230...146,735,027
Ensembl chr 6:146,697,553...146,735,027
JBrowse link
G Bmyc brain expressed myelocytomatosis oncogene enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 2:25,596,891...25,597,733
Ensembl chr 2:25,596,751...25,597,733
JBrowse link
G Bptf bromodomain PHD finger transcription factor enables IBA GO_Central GO_REF:0000033 NCBI chr11:106,923,907...107,022,982
Ensembl chr11:106,923,907...107,022,953
JBrowse link
G Bsx brain specific homeobox enables IDA
IBA
(MGI:3713592|PMID:17353277)
(PMID:17353277)
NTNU_SB
GO_Central
PMID:17353277 GO_REF:0000033 MGI:3713592 NCBI chr 9:40,782,994...40,790,258
Ensembl chr 9:40,785,423...40,791,353
JBrowse link
G Calcoco1 calcium binding and coiled coil domain 1 enables ISO
ISS
MGI
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr15:102,615,212...102,630,616
Ensembl chr15:102,615,212...102,630,613
JBrowse link
G Carf calcium response factor enables IDA
IBA
(MGI:2179876|PMID:11832226)
(PMID:11832226)
NTNU_SB
GO_Central
PMID:11832226 GO_REF:0000033 MGI:2179876 NCBI chr 1:60,137,380...60,193,112
Ensembl chr 1:60,137,406...60,193,112
JBrowse link
G Cc2d1a coiled-coil and C2 domain containing 1A enables ISO
IBA
IDA
(PMID:21155902) MGI
GO_Central
PMID:21155902 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:84,859,457...84,874,546
Ensembl chr 8:84,859,457...84,874,565
JBrowse link
G Cc2d1b coiled-coil and C2 domain containing 1B enables IDA
IBA
(PMID:21155902) MGI
GO_Central
PMID:21155902 GO_REF:0000033 NCBI chr 4:108,477,105...108,495,801
Ensembl chr 4:108,477,137...108,491,320
JBrowse link
G Ccar1 cell division cycle and apoptosis regulator 1 enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr10:62,579,707...62,628,147
Ensembl chr10:62,579,707...62,628,065
JBrowse link
G Cdk9 cyclin dependent kinase 9 enables IDA (PMID:21245044) MGI PMID:21245044 NCBI chr 2:32,595,794...32,608,098
Ensembl chr 2:32,595,796...32,603,088
JBrowse link
G Cdx1 caudal type homeobox 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr18:61,151,934...61,169,292
Ensembl chr18:61,151,934...61,169,271
JBrowse link
G Cdx2 caudal type homeobox 2 enables IDA
ISO
(MGI:6695858|PMID:9933478), (MGI:6695963|PMID:9512360)
(PMID:9512360), (PMID:9933478)
UniProt
MGI
PMID:9512360 PMID:9933478 GO_REF:0000119 MGI:4834177 MGI:6695858 MGI:6695963 NCBI chr 5:147,237,710...147,244,059
Ensembl chr 5:147,237,615...147,244,080
JBrowse link
G Cdx4 caudal type homeobox 4 enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr  X:102,365,004...102,373,830
Ensembl chr  X:102,365,004...102,374,198
JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha enables ISO
IBA
IDA
(MGI:5572903|PMID:10233885) MGI
GO_Central
NTNU_SB
PMID:10233885 GO_REF:0000033 GO_REF:0000096 MGI:4417868 MGI:5572903 NCBI chr 7:34,818,718...34,821,353
Ensembl chr 7:34,818,718...34,821,353
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta enables
contributes_to
ISO
IDA
(PMID:27812542) MGI
GO_Central
PMID:27812542 GO_REF:0000096 MGI:4417868 NCBI chr 2:167,530,835...167,532,352
Ensembl chr 2:167,530,835...167,532,338
JBrowse link
G Cebpd CCAAT/enhancer binding protein delta enables IDA
IBA
ISO
(MGI:5572879|PMID:15833715) NTNU_SB
GO_Central
MGI
PMID:15833715 GO_REF:0000033 GO_REF:0000096 MGI:4417868 MGI:5572879 NCBI chr16:15,705,150...15,707,409
Ensembl chr16:15,705,150...15,708,895
JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr14:54,947,823...54,949,604
Ensembl chr14:54,947,817...54,949,631
JBrowse link
G Cebpg CCAAT/enhancer binding protein gamma enables IDA
IBA
(MGI:5572879|PMID:15833715)
(PMID:15833715)
NTNU_SB
GO_Central
PMID:15833715 GO_REF:0000033 MGI:5572879 NCBI chr 7:34,745,847...34,755,991
Ensembl chr 7:34,745,847...34,755,998
JBrowse link
G Chd2 chromodomain helicase DNA binding protein 2 enables IMP (MGI:5532896|PMID:22569126)
(PMID:22569126)
UniProt PMID:22569126 MGI:5532896 NCBI chr 7:73,076,400...73,191,494
Ensembl chr 7:73,076,386...73,191,578
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 enables IDA (PMID:23319608) MGI PMID:23319608 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Ciart circadian associated repressor of transcription enables IDA
IBA
(MGI:5545849|PMID:24385426)
(PMID:24385426)
UniProt
GO_Central
PMID:24385426 GO_REF:0000033 MGI:5545849 NCBI chr 3:95,785,812...95,790,012
Ensembl chr 3:95,785,815...95,789,563
JBrowse link
G Clock clock circadian regulator enables IDA
ISO
(MGI:3843127|PMID:19299583), (MGI:5292598|PMID:21768648), (MGI:5297789|PMID:15147242), (MGI:5511073|PMID:24043798), (MGI:5545849|PMID:24385426), (MGI:5574290|PMID:22894897), (MGI:5582861|PMID:24089055), (MGI:5607228|PMID:21113167), (MGI:5613453|PMID:24051492)
(PMID:15147242), (PMID:19299583), (PMID:21113167), (PMID:21768648), (PMID:22894897), (PMID:24043798), (PMID:24051492), (PMID:24089055), (PMID:24385426)
UniProt
GO_Central
MGI
PMID:15147242 PMID:19299583 PMID:21113167 PMID:21768648 PMID:22894897 More... GO_REF:0000119 MGI:3843127 MGI:4834177 MGI:5292598 MGI:5297789 MGI:5511073 MGI:5545849 MGI:5574290 MGI:5582861 MGI:5607228 MGI:5613453 NCBI chr 5:76,357,715...76,452,675
Ensembl chr 5:76,357,715...76,452,639
JBrowse link
G Cphx1 cytoplasmic polyadenylated homeobox 1 enables IBA GO_Central GO_REF:0000033 NCBI chr14:25,941,983...25,956,798
Ensembl chr14:25,938,728...25,956,780
JBrowse link
G Creb1 cAMP responsive element binding protein 1 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 1:64,571,963...64,643,707
Ensembl chr 1:64,571,804...64,643,707
JBrowse link
G Creb3 cAMP responsive element binding protein 3 enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:43,562,658...43,567,061
Ensembl chr 4:43,562,332...43,567,060
JBrowse link
G Creb3l2 cAMP responsive element binding protein 3-like 2 enables IDA (MGI:5572871|PMID:17178827)
(PMID:17178827)
NTNU_SB PMID:17178827 MGI:5572871 NCBI chr 6:37,307,956...37,419,083
Ensembl chr 6:37,304,190...37,419,081
JBrowse link
G Creb3l3 cAMP responsive element binding protein 3-like 3 enables IBA GO_Central GO_REF:0000033 NCBI chr10:80,920,163...80,934,706
Ensembl chr10:80,920,158...80,934,708
JBrowse link
G Creb3l4 cAMP responsive element binding protein 3-like 4 enables IBA GO_Central GO_REF:0000033 NCBI chr 3:90,144,805...90,161,387
Ensembl chr 3:90,144,807...90,150,819
JBrowse link
G Crem cAMP responsive element modulator enables IDA
IBA
(MGI:5494765|PMID:23443664)
(PMID:23443664)
UniProt
GO_Central
PMID:23443664 GO_REF:0000033 MGI:5494765 NCBI chr18:3,263,181...3,337,688
Ensembl chr18:3,266,048...3,337,748
JBrowse link
G Crx cone-rod homeobox enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:15,599,872...15,613,880
Ensembl chr 7:15,599,872...15,613,893
JBrowse link
G Ctcf CCCTC-binding factor enables ISO
IEA
IBA
MGI
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 8:106,351,135...106,409,554
Ensembl chr 8:106,363,200...106,409,554
JBrowse link
G Ctcfl CCCTC-binding factor like enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 2:172,935,402...172,961,318
Ensembl chr 2:172,935,402...172,961,318
JBrowse link
G Cux1 cut-like homeobox 1 enables IDA (PMID:18836447) MGI PMID:18836447 NCBI chr 5:136,276,989...136,596,429
Ensembl chr 5:136,276,989...136,596,344
JBrowse link
G Cux2 cut-like homeobox 2 enables IDA (MGI:3531237|PMID:15656993)
(PMID:15656993)
NTNU_SB PMID:15656993 MGI:3531237 NCBI chr 5:121,996,025...122,188,522
Ensembl chr 5:121,994,429...122,188,165
JBrowse link
G Dach1 dachshund family transcription factor 1 enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr14:98,024,294...98,407,208
Ensembl chr14:98,024,289...98,407,201
JBrowse link
G Dach2 dachshund family transcription factor 2 enables IBA GO_Central GO_REF:0000033 NCBI chr  X:112,207,177...112,746,083
Ensembl chr  X:112,207,207...112,746,083
JBrowse link
G Dbp D site albumin promoter binding protein enables IBA GO_Central GO_REF:0000033 NCBI chr 7:45,354,658...45,359,579
Ensembl chr 7:45,354,512...45,359,627
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 enables ISO
IEA
IBA
MGI
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr10:127,126,662...127,132,160
Ensembl chr10:127,126,643...127,132,157
Ensembl chr10:127,126,643...127,132,157
JBrowse link
G Ddn dendrin enables ISO MGI GO_REF:0000008 NCBI chr15:98,701,663...98,705,806
Ensembl chr15:98,701,658...98,707,371
JBrowse link
G Dhx36 DEAH-box helicase 36 enables IDA
ISS
ISO
(MGI:6201778|PMID:25611385)
(PMID:25611385)
UniProt
MGI
PMID:25611385 GO_REF:0000024 GO_REF:0000119 MGI:4834177 MGI:6201778 NCBI chr 3:62,375,436...62,414,464
Ensembl chr 3:62,375,434...62,414,425
JBrowse link
G Dhx9 DExH-box helicase 9 enables ISO
ISS
MGI
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000119 MGI:4834177 NCBI chr 1:153,331,506...153,363,464
Ensembl chr 1:153,331,504...153,363,406
JBrowse link
G Dlx1 distal-less homeobox 1 enables IBA GO_Central GO_REF:0000033 NCBI chr 2:71,358,457...71,364,325
Ensembl chr 2:71,358,457...71,364,325
JBrowse link
G Dlx2 distal-less homeobox 2 enables IBA GO_Central GO_REF:0000033 NCBI chr 2:71,373,752...71,377,095
Ensembl chr 2:71,373,752...71,377,098
JBrowse link
G Dlx3 distal-less homeobox 3 enables IDA
IBA
(PMID:18684741) MGI
GO_Central
PMID:18684741 GO_REF:0000033 NCBI chr11:95,010,943...95,016,122
Ensembl chr11:95,010,945...95,016,122
JBrowse link
G Dlx4 distal-less homeobox 4 enables ISO
IBA
IEA
MGI
GO_Central
Ensembl
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr11:95,031,273...95,037,116
Ensembl chr11:95,031,273...95,037,089
JBrowse link
G Dlx5 distal-less homeobox 5 enables IDA
IBA
(MGI:5487530|PMID:20843790)
(PMID:20843790)
BHF-UCL
GO_Central
PMID:20843790 GO_REF:0000033 MGI:5487530 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Dlx6 distal-less homeobox 6 enables IBA GO_Central GO_REF:0000033 NCBI chr 6:6,863,272...6,867,965
Ensembl chr 6:6,863,334...6,868,568
JBrowse link
G Dmrt1 doublesex and mab-3 related transcription factor 1 enables IBA GO_Central GO_REF:0000033 NCBI chr19:25,483,070...25,581,692
Ensembl chr19:25,482,982...25,581,693
JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 enables IBA GO_Central GO_REF:0000033 NCBI chr19:25,649,758...25,656,355
Ensembl chr19:25,649,775...25,656,355
JBrowse link
G Dmrt3 doublesex and mab-3 related transcription factor 3 enables IBA GO_Central GO_REF:0000033 NCBI chr19:25,587,609...25,601,285
Ensembl chr19:25,587,665...25,601,285
JBrowse link
G Dmrta1 doublesex and mab-3 related transcription factor like family A1 enables IBA GO_Central GO_REF:0000033 NCBI chr 4:89,576,435...89,583,003
Ensembl chr 4:89,567,673...89,583,009
JBrowse link
G Dmrta2 doublesex and mab-3 related transcription factor like family A2 enables IBA GO_Central GO_REF:0000033 NCBI chr 4:109,835,222...109,840,896
Ensembl chr 4:109,835,250...109,840,884
JBrowse link
G Dmrtb1 DMRT-like family B with proline-rich C-terminal, 1 enables IBA GO_Central GO_REF:0000033 NCBI chr 4:107,533,485...107,561,208
Ensembl chr 4:107,533,487...107,541,427
JBrowse link
G Dmrtc1a DMRT-like family C1a NOT|enables IBA GO_Central GO_REF:0000033 NCBI chr  X:101,946,822...101,953,753
Ensembl chr  X:101,946,822...101,952,293
JBrowse link
G Dmrtc1b DMRT-like family C1b NOT|enables IBA GO_Central GO_REF:0000033 NCBI chr  X:101,751,487...101,758,815
Ensembl chr  X:101,751,471...101,758,815
JBrowse link
G Dmrtc1c1 DMRT-like family C1c1 NOT|enables IBA GO_Central GO_REF:0000033 NCBI chr  X:101,841,486...101,853,556
Ensembl chr  X:101,846,569...101,853,548
JBrowse link
G Dmrtc2 doublesex and mab-3 related transcription factor like family C2 NOT|enables IBA GO_Central GO_REF:0000033 NCBI chr 7:24,569,242...24,577,080
Ensembl chr 7:24,569,482...24,577,076
JBrowse link
G Dmtf1 cyclin D binding myb like transcription factor 1 enables IDA
IBA
(MGI:5825425|PMID:19816943)
(PMID:19816943)
NTNU_SB
GO_Central
PMID:19816943 GO_REF:0000033 MGI:5825425 NCBI chr 5:9,168,868...9,211,782
Ensembl chr 5:9,168,801...9,211,776
JBrowse link
G Dmtf1l cyclin D binding myb like transcription factor 1 enables IBA GO_Central GO_REF:0000033 NCBI chr  X:125,720,085...125,741,627
Ensembl chr  X:125,720,085...125,723,491
JBrowse link
G Dnmt3a DNA methyltransferase 3A enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr12:3,851,559...3,964,442
Ensembl chr12:3,856,007...3,964,443
JBrowse link
G Duxbl1 double homeobox B-like 1 enables ISO (PMID:17984056) NTNU_SB PMID:17984056 NCBI chr14:25,979,011...25,990,590
Ensembl chr14:25,979,001...25,990,512
JBrowse link
G E2f1 E2F transcription factor 1 enables IBA
IEA
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 NCBI chr 2:154,401,320...154,411,812
Ensembl chr 2:154,401,327...154,411,812
JBrowse link
G E2f2 E2F transcription factor 2 enables IBA
IEA
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 NCBI chr 4:135,899,585...135,923,368
Ensembl chr 4:135,899,705...135,923,368
JBrowse link
G E2f3 E2F transcription factor 3 enables IBA
IEA
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 NCBI chr13:30,090,558...30,171,172
Ensembl chr13:30,090,558...30,170,046
JBrowse link
G E2f4 E2F transcription factor 4 enables ISO
IBA
IDA
(PMID:11004506) MGI
GO_Central
PMID:11004506 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:106,024,295...106,032,002
Ensembl chr 8:106,024,295...106,032,002
JBrowse link
G E2f5 E2F transcription factor 5 enables IBA GO_Central GO_REF:0000033 NCBI chr 3:14,638,370...14,671,369
Ensembl chr 3:14,643,701...14,671,369
JBrowse link
G E2f6 E2F transcription factor 6 enables IBA
IEA
GO_Central
InterPro
GO_REF:0000002 GO_REF:0000033 NCBI chr12:16,860,932...16,876,753
Ensembl chr12:16,860,964...16,889,743
JBrowse link
G E2f7 E2F transcription factor 7 enables IDA
IBA
(MGI:5448509|PMID:22180533)
(PMID:22180533)
UniProt
GO_Central
PMID:22180533 GO_REF:0000033 MGI:5448509 NCBI chr10:110,580,799...110,623,245
Ensembl chr10:110,581,300...110,623,245
JBrowse link
G E2f8 E2F transcription factor 8 enables ISO
IEA
IBA
MGI
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 7:48,516,177...48,531,821
Ensembl chr 7:48,516,177...48,531,344
JBrowse link
G E4f1 E4F transcription factor 1 enables IBA GO_Central GO_REF:0000033 NCBI chr17:24,662,752...24,674,366
Ensembl chr17:24,662,752...24,689,287
JBrowse link
G Ebf1 early B cell factor 1 enables IDA
IBA
(MGI:5572892|PMID:12446773), (PMID:22194471) MGI
GO_Central
PMID:12446773 PMID:22194471 GO_REF:0000033 MGI:5572892 NCBI chr11:44,502,738...44,898,923
Ensembl chr11:44,508,144...44,898,918
JBrowse link
G Ebf2 early B cell factor 2 enables IDA
IBA
(MGI:2384470|PMID:12139918) NTNU_SB
GO_Central
PMID:12139918 GO_REF:0000033 MGI:2384470 NCBI chr14:67,470,741...67,668,401
Ensembl chr14:67,470,741...67,668,367
JBrowse link
G Ebf3 early B cell factor 3 enables IDA
IBA
(MGI:2384470|PMID:12139918)
(PMID:12139918)
NTNU_SB
GO_Central
PMID:12139918 GO_REF:0000033 MGI:2384470 NCBI chr 7:136,795,400...136,924,528
Ensembl chr 7:136,795,402...136,916,174
JBrowse link
G Ebf4 early B cell factor 4 enables ISO
IBA
MGI
GO_Central
GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:130,134,832...130,212,402
Ensembl chr 2:130,137,089...130,212,401
JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr15:75,766,643...75,781,425
Ensembl chr15:75,766,054...75,781,405
JBrowse link
G Egr1 early growth response 1 enables ISO
IDA
IBA
(PMID:20018936), (PMID:31467272)
(MGI:5009361|PMID:20018936), (MGI:6362262|PMID:31467272)
MGI
ARUK-UCL
GO_Central
BHF-UCL
PMID:20018936 PMID:31467272 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:5009361 MGI:6362262 NCBI chr18:34,994,260...34,998,009
Ensembl chr18:34,992,876...34,998,037
JBrowse link
G Egr2 early growth response 2 enables ISO
IBA
IDA
(PMID:8895582) MGI
GO_Central
PMID:8895582 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:67,370,334...67,383,354
Ensembl chr10:67,371,305...67,378,018
JBrowse link
G Egr3 early growth response 3 enables IBA GO_Central GO_REF:0000033 NCBI chr14:70,314,766...70,320,062
Ensembl chr14:70,314,652...70,320,063
JBrowse link
G Egr4 early growth response 4 enables IBA GO_Central GO_REF:0000033 NCBI chr 6:85,488,103...85,490,571
Ensembl chr 6:85,488,103...85,490,571
JBrowse link
G Ehf ets homologous factor enables ISO
IEA
MGI
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 2:103,093,776...103,133,620
Ensembl chr 2:103,093,778...103,133,623
JBrowse link
G Elf1 E74 like ETS transcription factor 1 enables IDA
ISO
(MGI:3589353|PMID:16002702) NTNU_SB
GO_Central
MGI
PMID:16002702 GO_REF:0000119 MGI:3589353 MGI:4834177 NCBI chr14:79,718,619...79,819,916
Ensembl chr14:79,718,634...79,819,934
JBrowse link
G Elf3 E74-like factor 3 enables IDA
IMP
(MGI:2179629|PMID:11893733)
(PMID:11893733)
NTNU_SB PMID:11893733 MGI:2179629 NCBI chr 1:135,181,312...135,186,210
Ensembl chr 1:135,181,313...135,186,306
JBrowse link
G Elf4 E74 like ETS transcription factor 4 enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr  X:47,499,926...47,552,009
Ensembl chr  X:47,499,923...47,552,009
JBrowse link
G Elk1 ELK1, member of ETS oncogene family enables ISO
IEA
MGI
GO_Central
Ensembl
RGD
PMID:11557580 GO_REF:0000096 GO_REF:0000107 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:628487 NCBI chr  X:20,799,634...20,816,847
Ensembl chr  X:20,799,634...20,816,847
JBrowse link
G Elk3 ELK3, member of ETS oncogene family enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr10:93,083,277...93,147,021
Ensembl chr10:93,083,276...93,146,997
JBrowse link
G Elk4 ELK4, member of ETS oncogene family enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 1:131,935,129...131,954,186
Ensembl chr 1:131,935,345...131,960,350
JBrowse link
G Emx1 empty spiracles homeobox 1 enables IBA GO_Central GO_REF:0000033 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444
JBrowse link
G Emx2 empty spiracles homeobox 2 enables IBA GO_Central GO_REF:0000033 NCBI chr19:59,447,122...59,453,789
Ensembl chr19:59,446,804...59,453,789
JBrowse link
G En1 engrailed 1 enables ISO
IEA
IBA
MGI
Ensembl
GO_Central
GO_REF:0000033 GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721
JBrowse link
G En2 engrailed 2 enables IBA GO_Central GO_REF:0000033 NCBI chr 5:28,370,694...28,377,195
Ensembl chr 5:28,370,692...28,377,164
JBrowse link
G Eomes eomesodermin enables IBA GO_Central GO_REF:0000033 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200
JBrowse link
G Ep300 E1A binding protein p300 enables ISO RGD
GO_Central
MGI
PMID:20702579 GO_REF:0000096 MGI:4417868 RGD:5128544 NCBI chr15:81,470,329...81,536,273
Ensembl chr15:81,469,552...81,536,278
JBrowse link
G Epas1 endothelial PAS domain protein 1 enables IGI (PMID:9113979) MGI PMID:9113979 NCBI chr17:87,061,292...87,140,838
Ensembl chr17:87,061,128...87,140,838
JBrowse link
G Erg ETS transcription factor enables ISO
IEA
MGI
GO_Central
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr16:95,160,028...95,387,452
Ensembl chr16:95,160,028...95,387,452
JBrowse link
G Esr1 estrogen receptor 1 (alpha) enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614
JBrowse link
G Esr2 estrogen receptor 2 (beta) enables ISO MGI
GO_Central
GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033
JBrowse link
G Esrra estrogen related receptor, alpha enables IDA (PMID:18234909) MGI PMID:18234909 NCBI chr19:6,888,345...6,899,182
Ensembl chr19:6,888,345...6,899,208
JBrowse link
G Esrrb estrogen related receptor, beta enables IMP
IDA
(MGI:5823092|PMID:27723719)
(PMID:18662995)
(PMID:27723719)
(MGI:3813404|PMID:18662995)
UniProt
BHF-UCL
PMID:18662995 PMID:27723719 MGI:3813404 MGI:5823092 NCBI chr12:86,407,891...86,568,402
Ensembl chr12:86,407,891...86,568,402
JBrowse link
G Ets1 E26 avian leukemia oncogene 1, 5' domain enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr 9:32,547,501...32,669,116
Ensembl chr 9:32,547,517...32,669,116
JBrowse link
G Ets2 E26 avian leukemia oncogene 2, 3' domain enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr16:95,503,274...95,522,093
Ensembl chr16:95,502,942...95,522,095
JBrowse link
G Etv1 ets variant 1 enables ISO
IEA
MGI
Ensembl
GO_REF:0000107 GO_REF:0000119 MGI:4834177 NCBI chr12:38,829,655...38,920,484
Ensembl chr12:38,829,379...38,920,483
JBrowse link
G Etv2 ets variant 2 enables IDA (MGI:5572895|PMID:12087183)
(PMID:12087183)
NTNU_SB PMID:12087183 MGI:5572895 NCBI chr 7:30,333,041...30,335,934
Ensembl chr 7:30,333,041...30,335,277
JBrowse link
G Etv4 ets variant 4 enables ISO MGI
GO_Central
GO_REF:0000119 MGI:4834177 NCBI chr11:101,660,573...101,677,963
Ensembl chr11:101,660,568...101,676,197
JBrowse link
G Etv6 ets variant 6 enables IDA (MGI:3721210|PMID:17606295)
(PMID:17606295)
NTNU_SB PMID:17606295 MGI:3721210 NCBI chr 6:134,012,663...134,247,121
Ensembl chr 6:134,012,663...134,247,121
JBrowse link
G Evx1 even-skipped homeobox 1 enables IBA GO_Central GO_REF:0000033 NCBI chr 6:52,290,483...52,295,374
Ensembl chr 6:52,290,483...52,295,363
JBrowse link
G Evx2 even-skipped homeobox 2 enables IBA GO_Central GO_REF:0000033 NCBI chr 2:74,483,333...74,491,864
Ensembl chr 2:74,483,335...74,489,901
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables IDA (PMID:24137001) MGI PMID:24137001 NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275
JBrowse link
G Fev FEV transcription factor, ETS family member enables ISO
IEA
MGI
Ensembl
GO_Central
GO_REF:0000096 GO_REF:0000107 MGI:4417868 NCBI chr 1:74,920,660...74,924,632
Ensembl chr 1:74,920,668...74,924,578
JBrowse link
G Fezf1 Fez family zinc finger 1 enables IBA
IDA
(PMID:20431123) GO_Central
MGI
PMID:20431123 GO_REF:0000033 NCBI chr 6:23,245,043...23,250,942
Ensembl chr 6:23,245,043...23,248,361
JBrowse link
G Fezf2 Fez family zinc finger 2 enables IBA
IDA
(PMID:20431123) GO_Central
MGI
PMID:20431123 GO_REF:0000033 NCBI chr14:10,121,561...10,130,771
Ensembl chr14:10,121,574...10,127,669
JBrowse link
G Figla folliculogenesis specific basic helix-loop-helix enables IDA (MGI:1326792|PMID:9362457) NTNU_SB PMID:9362457 MGI:1326792 NCBI chr 6:85,993,476...85,997,978
Ensembl chr 6:85,993,153...85,997,978
JBrowse link
G Fli1 Friend leukemia integration 1 enables IDA (MGI:3721210|PMID:17606295), (PMID:17962413)
(PMID:17606295), (PMID:17962413)
MGI PMID:17606295 PMID:17962413 MGI:3721210 NCBI chr 9:32,333,500...32,454,292
Ensembl chr 9:32,333,500...32,454,157
JBrowse link
G Fos FBJ osteosarcoma oncogene enables ISO
IBA
IDA
(PMID:11925568), (