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ONTOLOGY REPORT - ANNOTATIONS

Term:transcription cis-regulatory region binding
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Accession:GO:0000976 term browser browse the term
Definition:Binding to a specific sequence of DNA that is part of a regulatory region that controls transcription of that section of the DNA. The transcribed region might be described as a gene, cistron, or operon.
Comment:Note that this term is meant to also capture non-specific binding to regulatory regions. Also, to minimize ambiguity in the use of the word "promoter" in GO, we have chosen the phrase "transcription regulatory region" to refer to all of the regulatory regions. Regulatory regions in the DNA which control initiation may include the "core promoter" where the basal transcription machinery binds, the "core promoter proximal region" where regulatory factors other than the basal machinery bind. There are also additional regulatory regions, in both the DNA and the RNA transcript, which regulate elongation or termination of transcription.
Synonyms:exact_synonym: transcription regulatory region sequence-specific DNA binding
 narrow_synonym: bacterial-type RNA polymerase regulatory region DNA binding;   bacterial-type RNA polymerase transcription regulatory region sequence-specific DNA binding;   eubacterial-type RNA polymerase regulatory region DNA binding;   eubacterial-type RNA polymerase regulatory region sequence-specific DNA binding
 broad_synonym: regulatory region DNA binding
 related_synonym: transcription regulatory region DNA binding
 alt_id: GO:0000975;   GO:0000984;   GO:0001017;   GO:0044212


show annotations for term's descendants           Sort by:
transcription cis-regulatory region binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 enables ISO (MGI:5494393|PMID:22053081)
(PMID:22053081)		 BHF-UCL PMID:22053081 MGI:5494393 NCBI chr 1:35,148,984...35,196,252
Ensembl chr 1:36,324,733...36,360,832 		JBrowse link
G AHR aryl hydrocarbon receptor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:17,949,254...17,998,737
Ensembl chr 7:17,278,637...17,326,171 		JBrowse link
G AHRR aryl hydrocarbon receptor repressor enables IEA TreeGrafter GO_REF:0000118 Ensembl chr 5:436,542...567,310 JBrowse link
G ANKRD2 ankyrin repeat domain 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr10:94,192,920...94,204,400
Ensembl chr10:97,686,121...97,697,238 		JBrowse link
G AR androgen receptor enables IEA Ensembl GO_REF:0000107 NCBI chr  X:56,722,828...56,909,004
Ensembl chr  X:66,791,081...66,969,357 		JBrowse link
G ARID4A AT-rich interaction domain 4A enables IEA TreeGrafter GO_REF:0000118 NCBI chr14:38,890,688...38,965,928
Ensembl chr14:57,159,399...57,233,825 		JBrowse link
G ARID4B AT-rich interaction domain 4B enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:210,711,946...210,874,034
Ensembl chr 1:215,729,783...215,888,412 		JBrowse link
G ARID5A AT-rich interaction domain 5A enables IEA TreeGrafter GO_REF:0000118 NCBI chr2A:102,762,076...102,778,072
Ensembl chr2A:97,459,690...97,475,651 		JBrowse link
G ARID5B AT-rich interaction domain 5B enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:58,426,519...58,621,986
Ensembl chr10:60,756,484...60,952,174 		JBrowse link
G ASB8 ankyrin repeat and SOCS box containing 8 enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:40,572,795...40,582,635
Ensembl chr12:41,448,039...41,457,662 		JBrowse link
G ASH2L ASH2 like, histone lysine methyltransferase complex subunit enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:37,408,151...37,442,080
Ensembl chr 8:34,583,265...34,618,183 		JBrowse link
G ATF3 activating transcription factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:188,176,728...188,188,842
Ensembl chr 1:193,036,793...193,049,150 		JBrowse link
G ATF4 activating transcription factor 4 contributes_to
enables		 ISO (PMID:12871976)
(PMID:21113145)		 ParkinsonsUK-UCL PMID:12871976 PMID:21113145 NCBI chr22:20,426,743...20,428,892
Ensembl chr22:38,248,094...38,249,249 		JBrowse link
G ATF5 activating transcription factor 5 enables IEA Ensembl GO_REF:0000107 NCBI chr19:46,941,480...46,946,697
Ensembl chr19:55,859,476...55,861,708 		JBrowse link
G ATF6 activating transcription factor 6 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:137,178,629...137,382,256
Ensembl chr 1:140,977,750...141,176,725 		JBrowse link
G ATF6B activating transcription factor 6 beta enables IEA Ensembl GO_REF:0000107 NCBI chr 6:31,762,161...31,775,136
Ensembl chr 6:32,643,124...32,655,617 		JBrowse link
G ATMIN ATM interactor enables IEA TreeGrafter GO_REF:0000118 NCBI chr16:61,642,394...61,653,921 JBrowse link
G ATOH7 atonal bHLH transcription factor 7 enables ISO (PMID:31696227)
(MGI:6727566|PMID:33712461)		 UniProt PMID:31696227 PMID:33712461 MGI:6727566 NCBI chr10:64,714,546...64,716,341 JBrowse link
G BAHD1 bromo adjacent homology domain containing 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr15:19,376,233...19,404,699
Ensembl chr15:37,630,476...37,657,918 		JBrowse link
G BASP1 brain abundant membrane attached signal protein 1 enables ISO (MGI:4418604|PMID:19050011)
(PMID:19050011)		 UniProt PMID:19050011 MGI:4418604 NCBI chr 5:17,521,054...17,580,999 JBrowse link
G BCOR BCL6 corepressor enables IEA Ensembl GO_REF:0000107 NCBI chr  X:32,497,931...32,624,307
Ensembl chr  X:40,202,235...40,249,986 		JBrowse link
G BMAL1 basic helix-loop-helix ARNT like 1 enables ISO (MGI:5014424|PMID:21680841)
(PMID:21680841)		 UniProt PMID:21680841 MGI:5014424 NCBI chr11:13,436,580...13,547,135
Ensembl chr11:13,163,028...13,240,376 		JBrowse link
G BRCA1 BRCA1 DNA repair associated enables IEA Ensembl GO_REF:0000107 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRD4 bromodomain containing 4 enables IEA Ensembl GO_REF:0000107 NCBI chr19:14,768,239...14,805,770
Ensembl chr19:15,754,930...15,789,600 		JBrowse link
G BRD7 bromodomain containing 7 enables IEA Ensembl GO_REF:0000107 NCBI chr16:30,576,449...30,630,409
Ensembl chr16:49,463,048...49,514,386 		JBrowse link
G CALCOCO1 calcium binding and coiled-coil domain 1 enables IEA Ensembl GO_REF:0000107 NCBI chr12:35,027,491...35,044,039
Ensembl chr12:35,814,629...35,831,191 		JBrowse link
G CARM1 coactivator associated arginine methyltransferase 1 enables ISO (MGI:4887324|PMID:18188184)
(PMID:18188184)		 UniProt PMID:18188184 MGI:4887324 NCBI chr19:10,424,993...10,476,702
Ensembl chr19:11,144,733...11,195,948 		JBrowse link
G CBX3 chromobox 3 enables ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chr 7:26,847,247...26,859,339
Ensembl chr 7:26,450,411...26,462,350 		JBrowse link
G CBX4 chromobox 4 enables IEA Ensembl GO_REF:0000107 NCBI chr17:73,913,264...73,919,540
Ensembl chr17:79,449,919...79,458,866 		JBrowse link
G CCNT1 cyclin T1 enables IEA Ensembl GO_REF:0000107 NCBI chr12:40,028,334...40,057,393
Ensembl chr12:40,906,907...40,935,392 		JBrowse link
G CDK5RAP2 CDK5 regulatory subunit associated protein 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:91,519,179...91,707,469
Ensembl chr 9:119,868,015...120,055,608 		JBrowse link
G CDK9 cyclin dependent kinase 9 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:98,905,468...98,909,923
Ensembl chr 9:127,580,862...127,584,935 		JBrowse link
G CDX1 caudal type homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:145,591,186...145,608,976
Ensembl chr 5:151,592,139...151,614,257 		JBrowse link
G CEBPA CCAAT enhancer binding protein alpha enables ISO (PMID:12695546), (PMID:28186500)
(PMID:18632661)		 UniProt
MGI		 PMID:12695546 PMID:18632661 PMID:28186500 NCBI chr19:30,223,567...30,226,204 JBrowse link
G CEBPB CCAAT enhancer binding protein beta enables ISO (PMID:30355733)
(MGI:5688824|PMID:24216764)		 ARUK-UCL
UniProt		 PMID:24216764 PMID:30355733 MGI:5688824 NCBI chr20:46,533,163...46,535,282 JBrowse link
G CEBPD CCAAT enhancer binding protein delta enables ISO (PMID:18632661) MGI PMID:18632661 NCBI chr 8:44,167,256...44,168,545 JBrowse link
G CHD3 chromodomain helicase DNA binding protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chr17:7,919,803...7,947,787
Ensembl chr17:7,910,644...7,933,115 		JBrowse link
G CIART circadian associated repressor of transcription enables IEA InterPro GO_REF:0000002 NCBI chr 1:125,627,812...125,632,367
Ensembl chr 1:129,278,742...129,283,271 		JBrowse link
G CIITA class II major histocompatibility complex transactivator enables ISO (PMID:19041327) BHF-UCL PMID:19041327 NCBI chr16:9,819,440...9,885,379
Ensembl chr16:11,041,434...11,090,485 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:16382163 PMID:21367864 RGD:10059371 RGD:7247438 NCBI chr2B:94,762,796...94,836,304
Ensembl chr2B:212,891,261...212,958,130 		JBrowse link
G CREB3L1 cAMP responsive element binding protein 3 like 1 enables ISO PMID:15665855
(MGI:5616321|PMID:15665855)		 ParkinsonsUK-UCL PMID:15665855 MGI:5616321 RGD:1558627 NCBI chr11:46,236,384...46,280,145
Ensembl chr11:46,788,561...46,830,246 		JBrowse link
G CREB3L2 cAMP responsive element binding protein 3 like 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:129,833,446...129,960,145
Ensembl chr 7:142,331,759...142,452,438 		JBrowse link
G CREB3L3 cAMP responsive element binding protein 3 like 3 enables IEA Ensembl GO_REF:0000107 NCBI chr19:3,176,863...3,194,294
Ensembl chr19:4,127,597...4,144,300 		JBrowse link
G CRY2 cryptochrome circadian regulator 2 enables IEA Ensembl GO_REF:0000107 NCBI chr11:45,801,504...45,837,357
Ensembl chr11:46,293,717...46,329,759 		JBrowse link
G CTCF CCCTC-binding factor enables IEA Ensembl GO_REF:0000107 NCBI chr16:47,906,503...47,983,271
Ensembl chr16:67,302,952...67,372,041 		JBrowse link
G CTCFL CCCTC-binding factor like enables IEA Ensembl GO_REF:0000107 NCBI chr20:53,836,295...53,865,974
Ensembl chr20:55,114,405...55,143,717 		JBrowse link
G DDIT3 DNA damage inducible transcript 3 enables ISO (PMID:24939851)
(MGI:3525819|PMID:15601821)		 ParkinsonsUK-UCL PMID:15601821 PMID:24939851 MGI:3525819 NCBI chr12:31,406,332...31,410,293
Ensembl chr12:31,664,743...31,668,701 		JBrowse link
G DHX36 DEAH-box helicase 36 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871 		JBrowse link
G DLX2 distal-less homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G DLX3 distal-less homeobox 3 enables IEA Ensembl GO_REF:0000107 NCBI chr17:44,076,437...44,081,690
Ensembl chr17:48,950,474...48,955,848 		JBrowse link
G DLX5 distal-less homeobox 5 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:88,972,066...88,977,588
Ensembl chr 7:102,555,267...102,561,186 		JBrowse link
G E2F1 E2F transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr20:29,963,083...29,973,860
Ensembl chr20:31,103,764...31,110,604 		JBrowse link
G EGR1 early growth response 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260 		JBrowse link
G EGR2 early growth response 2 enables IEA Ensembl GO_REF:0000107 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
G ELK1 ETS transcription factor ELK1 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:40,071,433...40,086,518
Ensembl chr  X:47,967,492...47,982,579 		JBrowse link
G ERBB4 erb-b2 receptor tyrosine kinase 4 enables IEA Ensembl GO_REF:0000107 NCBI chr2B:98,625,630...99,795,371
Ensembl chr2B:217,069,644...218,272,006 		JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr11:123,272,111...123,400,413
Ensembl chr11:127,174,721...127,288,673 		JBrowse link
G ETV5 ETS variant transcription factor 5 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:183,076,677...183,139,886
Ensembl chr 3:191,545,915...191,606,550 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:22821416 RGD:7242953 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726 		JBrowse link
G FEZF1 FEZ family zinc finger 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:114,311,563...114,322,490
Ensembl chr 7:126,995,708...127,005,732 		JBrowse link
G FEZF2 FEZ family zinc finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052 		JBrowse link
G FLI1 Fli-1 proto-oncogene, ETS transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr11:123,506,859...123,626,024
Ensembl chr11:127,409,301...127,530,312 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit enables IEA Ensembl GO_REF:0000107 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit enables ISO
IEA		 RGD
Ensembl		 PMID:21367864 GO_REF:0000107 RGD:7247438 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397 		JBrowse link
G FOXA1 forkhead box A1 enables ISO (PMID:16087863), (PMID:16331276), (PMID:19127412) UniProt PMID:16087863 PMID:16331276 PMID:19127412 NCBI chr14:18,347,284...18,352,705 JBrowse link
G FOXA2 forkhead box A2 enables ISO (PMID:15737987) UniProt PMID:15737987 NCBI chr20:22,519,942...22,524,262 JBrowse link
G FOXA3 forkhead box A3 enables IEA Ensembl GO_REF:0000107 NCBI chr19:42,873,933...42,883,479
Ensembl chr19:51,410,473...51,418,744 		JBrowse link
G FOXC1 forkhead box C1 enables ISO (PMID:17210863), (PMID:19279310), (PMID:25786029), (PMID:27804176)
(MGI:3813419|PMID:18579532)		 UniProt
BHF-UCL		 PMID:17210863 PMID:18579532 PMID:19279310 PMID:25786029 PMID:27804176 MGI:3813419 NCBI chr 6:1,429,051...1,433,180 JBrowse link
G FOXC2 forkhead box C2 enables ISO (MGI:3813419|PMID:18579532) BHF-UCL PMID:18579532 MGI:3813419 NCBI chr16:67,237,476...67,239,545 JBrowse link
G FOXD3 forkhead box D3 enables ISO (PMID:7958446) MGI PMID:7958446 NCBI chr 1:62,577,800...62,580,360 JBrowse link
G FOXF1 forkhead box F1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:67,183,416...67,188,211
Ensembl chr16:86,516,119...86,519,949 		JBrowse link
G FOXH1 forkhead box H1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:141,240,691...141,244,381
Ensembl chr 8:144,225,933...144,232,736 		JBrowse link
G FOXI1 forkhead box I1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:165,468,600...165,473,088
Ensembl chr 5:172,228,840...172,232,692 		JBrowse link
G FOXJ1 forkhead box J1 enables IEA Ensembl GO_REF:0000107 NCBI chr17:70,084,920...70,089,865
Ensembl chr17:75,638,634...75,641,666 		JBrowse link
G FOXK1 forkhead box K1 enables ISO (PMID:17670796), (PMID:25402684), (PMID:29861159) UniProt PMID:17670796 PMID:25402684 PMID:29861159 NCBI chr 7:4,934,773...5,017,127
Ensembl chr 7:4,975,444...5,056,174 		JBrowse link
G FOXK2 forkhead box K2 enables ISO (PMID:22083952) UniProt PMID:22083952 NCBI chr17:76,930,135...77,018,294 JBrowse link
G FOXM1 forkhead box M1 enables ISO (PMID:17261592) MGI PMID:17261592 NCBI chr12:2,978,400...2,999,077
Ensembl chr12:2,910,028...2,930,503 		JBrowse link
G FOXN1 forkhead box N1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:28,237,150...28,272,010
Ensembl chr17:28,740,775...28,773,592 		JBrowse link
G FOXN4 forkhead box N4 enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:106,855,308...106,886,508
Ensembl chr12:110,251,449...110,280,025 		JBrowse link
G FOXO3 forkhead box O3 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:106,360,519...106,485,676
Ensembl chr 6:110,406,266...110,516,272 		JBrowse link
G FOXP1 forkhead box P1 ISO RGD PMID:21606195 RGD:11561924 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173 		JBrowse link
G GABPA GA binding protein transcription factor subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chr21:12,179,921...12,217,851
Ensembl chr21:25,536,750...25,574,871 		JBrowse link
G GABPB1 GA binding protein transcription factor subunit beta 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:29,223,588...29,303,863
Ensembl chr15:47,547,202...47,600,234 		JBrowse link
G GABPB2 GA binding protein transcription factor subunit beta 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:126,419,892...126,479,691
Ensembl chr 1:130,084,854...130,114,493 		JBrowse link
G GATA1 GATA binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:41,088,724...41,092,190
Ensembl chr  X:48,945,394...48,953,126 		JBrowse link
G GATA3 GATA binding protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G GATA4 GATA binding protein 4 enables IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:7,442,921...7,526,731 JBrowse link
G GATA5 GATA binding protein 5 enables IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 Ensembl chr20:60,148,359...60,158,886 JBrowse link
G GATA6 GATA binding protein 6 enables IEA UniProt GO_REF:0000117 NCBI chr18:15,411,764...15,444,402 JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor enables IEA Ensembl GO_REF:0000107 NCBI chr 1:95,139,171...95,151,054
Ensembl chr 1:93,876,245...93,883,528 		JBrowse link
G GLI1 GLI family zinc finger 1 enables IEA Ensembl GO_REF:0000107 NCBI chr12:31,453,759...31,466,194
Ensembl chr12:31,710,057...31,722,473 		JBrowse link
G GLI2 GLI family zinc finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G GLIS2 GLIS family zinc finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chr16:3,234,549...3,257,994
Ensembl chr16:4,418,524...4,425,631 		JBrowse link
G GMNN geminin DNA replication inhibitor NOT|enables ISO (MGI:3663964|PMID:16924111)
(PMID:16924111)		 UniProt PMID:16924111 MGI:3663964 NCBI chr 6:24,612,864...24,624,010
Ensembl chr 6:24,944,377...24,955,575 		JBrowse link
G GRHL1 grainyhead like transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr2A:9,944,385...9,994,510
Ensembl chr2A:10,105,486...10,155,177 		JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 contributes_to
enables		 ISO
IEA		 (PMID:11802795) BHF-UCL
Ensembl		 PMID:11802795 GO_REF:0000107 NCBI chr 5:149,876,970...149,880,269
Ensembl chr 5:155,875,935...155,878,166 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 contributes_to ISO (MGI:4362015|PMID:11812799) BHF-UCL PMID:11812799 MGI:4362015 NCBI chr 4:165,755,000...165,758,735 JBrowse link
G HDAC1 histone deacetylase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410 		JBrowse link
G HDAC4 histone deacetylase 4 contributes_to ISO (PMID:18850004) BHF-UCL PMID:18850004 NCBI chr2B:126,287,745...126,649,815
Ensembl chr2B:245,123,061...245,427,054 		JBrowse link
G HDAC5 histone deacetylase 5 contributes_to
enables		 ISO
IEA		 (PMID:19351956) BHF-UCL
Ensembl		 PMID:19351956 GO_REF:0000107 NCBI chr17:13,273,052...13,319,695
Ensembl chr17:13,446,836...13,479,140 		JBrowse link
G HHEX hematopoietically expressed homeobox enables IEA Ensembl GO_REF:0000107 NCBI chr10:89,433,402...89,439,137
Ensembl chr10:92,947,373...92,952,992 		JBrowse link
G HINFP histone H4 transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr11:113,959,670...113,973,781
Ensembl chr11:117,888,855...117,902,184 		JBrowse link
G HMGA2 high mobility group AT-hook 2 enables ISO (PMID:17426251) UniProt PMID:17426251 NCBI chr12:22,954,946...23,096,623 JBrowse link
G HMGB1 high mobility group box 1 enables ISO (PMID:19158276) UniProt PMID:19158276 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527 		JBrowse link
G HMGB2 high mobility group box 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:165,559,848...165,562,625
Ensembl chr 4:177,797,457...177,800,952 		JBrowse link
G HNF1A HNF1 homeobox A enables ISO (PMID:12453420), (PMID:15961790) BHF-UCL PMID:12453420 PMID:15961790 NCBI chr12:118,562,308...118,584,596
Ensembl chr12:121,932,671...121,955,911 		JBrowse link
G HNF1B HNF1 homeobox B enables IEA Ensembl GO_REF:0000107 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha enables IEA Ensembl GO_REF:0000107 NCBI chr20:40,684,450...40,763,824
Ensembl chr20:41,779,034...41,856,536 		JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L enables ISO (PMID:11809897) UniProt PMID:11809897 NCBI chr19:35,943,720...35,959,795 JBrowse link
G HOXA13 homeobox A13 enables ISO (PMID:18483557) MGI PMID:18483557 NCBI chr 7:27,838,656...27,844,562 JBrowse link
G HOXC13 homeobox C13 enables IEA Ensembl GO_REF:0000107 NCBI chr12:34,808,575...34,816,324
Ensembl chr12:35,596,821...35,604,560 		JBrowse link
G HSF1 heat shock transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:141,055,310...141,078,360
Ensembl chr 8:144,062,137...144,067,866 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 enables ISO (MGI:3822269|PMID:18804520), (PMID:7969165) UniProt PMID:7969165 PMID:18804520 MGI:3822269 NCBI chr 7:50,946,817...51,047,168
Ensembl chr 7:51,191,685...51,291,245 		JBrowse link
G IRF1 interferon regulatory factor 1 enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:127,903,887...127,913,843
Ensembl chr 5:134,067,441...134,075,035 		JBrowse link
G IRF2 interferon regulatory factor 2 enables IEA InterPro GO_REF:0000002 NCBI chr 4:176,554,979...176,641,827
Ensembl chr 4:188,779,134...188,865,764 		JBrowse link
G IRF3 interferon regulatory factor 3 enables IEA InterPro GO_REF:0000002 NCBI chr19:46,674,193...46,680,464
Ensembl chr19:55,593,627...55,599,903 		JBrowse link
G IRF4 interferon regulatory factor 4 enables IEA InterPro GO_REF:0000002 NCBI chr 6:206,282...226,487
Ensembl chr 6:342,718...356,654 		JBrowse link
G IRF5 interferon regulatory factor 5 enables IEA InterPro GO_REF:0000002 NCBI chr 7:120,889,752...120,902,096
Ensembl chr 7:133,415,170...133,426,356 		JBrowse link
G IRF6 interferon regulatory factor 6 enables IEA InterPro GO_REF:0000002 NCBI chr 1:185,361,612...185,382,516
Ensembl chr 1:190,226,727...190,247,145 		JBrowse link
G IRF7 interferon regulatory factor 7 enables IEA InterPro GO_REF:0000002 Ensembl chr11:647,827...651,314 JBrowse link
G IRF8 interferon regulatory factor 8 enables IEA InterPro GO_REF:0000002 NCBI chr16:66,568,370...66,591,949
Ensembl chr16:85,905,334...85,929,073 		JBrowse link
G IRF9 interferon regulatory factor 9 enables IEA InterPro GO_REF:0000002 NCBI chr14:4,937,068...4,942,870
Ensembl chr14:23,061,990...23,067,824 		JBrowse link
G ISL1 ISL LIM homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:62,635,095...62,650,141
Ensembl chr 5:64,252,715...64,264,674 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:14645924), (PMID:21113145), (PMID:22083952), (PMID:24623306), (PMID:2833704), (PMID:9732876)
(PMID:19303854)		 BHF-UCL
MGI		 PMID:2833704 PMID:9732876 PMID:14645924 PMID:19303854 PMID:21113145 More... NCBI chr 1:58,042,794...58,045,536 JBrowse link
G JUND JunD proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:1903194)
(PMID:22990073)
PMID:10523647		 UniProt
MGI
ParkinsonsUK-UCL		 PMID:1903194 PMID:10523647 PMID:22990073 RGD:10047214 NCBI chr19:17,755,331...17,757,164 JBrowse link
G KCNH2 potassium voltage-gated channel subfamily H member 2 enables ISO (PMID:31146003) ARUK-UCL PMID:31146003 NCBI chr 7:142,528,979...142,562,074 JBrowse link
G KDM5A lysine demethylase 5A enables IEA Ensembl GO_REF:0000107 NCBI chr12:342,555...452,161
Ensembl chr12:319,273...423,634 		JBrowse link
G KLF1 KLF transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr19:12,446,130...12,449,238
Ensembl chr19:13,188,652...13,191,425 		JBrowse link
G KLF11 KLF transcription factor 11 enables IEA Ensembl GO_REF:0000107 NCBI chr2A:10,027,152...10,051,445
Ensembl chr2A:10,195,564...10,208,220 		JBrowse link
G KLF15 KLF transcription factor 15 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:123,395,678...123,410,514
Ensembl chr 3:130,712,599...130,724,530 		JBrowse link
G KLF17 KLF transcription factor 17 enables ISO (MGI:4410400|PMID:19801974) UniProt PMID:19801974 MGI:4410400 NCBI chr 1:43,419,910...43,435,499
Ensembl chr 1:44,791,190...44,802,965 		JBrowse link
G KLF4 KLF transcription factor 4 enables ISO PMID:19531492
(MGI:4887334|PMID:16954384), (PMID:24161396)		 UniProt
MGI		 PMID:16954384 PMID:19531492 PMID:24161396 MGI:4887334 RGD:8553301 NCBI chr 9:78,634,545...78,639,447
Ensembl chr 9:106,820,954...106,825,797 		JBrowse link
G KMT2D lysine methyltransferase 2D enables IEA Ensembl GO_REF:0000107 NCBI chr12:39,689,463...39,731,904
Ensembl chr12:40,575,083...40,608,661 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LHX3 LIM homeobox 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:107,271,131...107,280,001
Ensembl chr 9:136,252,880...136,260,366 		JBrowse link
G LOC100974647 core histone macro-H2A.2 enables IEA Ensembl GO_REF:0000107 NCBI chr10:66,526,013...66,585,568
Ensembl chr10:69,077,456...69,114,194 		JBrowse link
G LOC100974858 core histone macro-H2A.1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:130,727,065...130,791,932
Ensembl chr 5:136,868,521...136,933,834 		JBrowse link
G LOC100979007 bromodomain-containing protein 7-like enables IEA Ensembl GO_REF:0000107 NCBI chr 3:157,125,954...157,128,100
Ensembl chr16:49,463,048...49,514,386 		JBrowse link
G LOC100981854 cyclic AMP-dependent transcription factor ATF-7 enables IEA Ensembl GO_REF:0000107 NCBI chr12:35,128,031...35,245,505
Ensembl chr12:35,914,378...36,021,141 		JBrowse link
G LOC103784898 ATM interactor-like enables IEA TreeGrafter GO_REF:0000118 NCBI chr 9:66,393,101...66,395,553 JBrowse link
G LOC129392969 DDIT3 upstream open reading frame protein enables IEA Ensembl GO_REF:0000107 Ensembl chr12:31,664,743...31,668,701 JBrowse link
G MAFK MAF bZIP transcription factor K enables IEA Ensembl GO_REF:0000107 NCBI chr 7:1,778,862...1,791,163
Ensembl chr 7:1,904,031...1,909,774 		JBrowse link
G MEF2C myocyte enhancer factor 2C enables ISO (MGI:4940010|PMID:8035824) BHF-UCL PMID:8035824 MGI:4940010 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426 		JBrowse link
G MEN1 menin 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:60,159,009...60,166,222
Ensembl chr11:63,499,962...63,507,164 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr15:68,440,626...68,441,935
Ensembl chr15:87,645,768...87,647,210 		JBrowse link
G MRTFA myocardin related transcription factor A enables ISO (PMID:17991879) MGI PMID:17991879 NCBI chr22:21,314,829...21,536,673
Ensembl chr22:39,413,002...39,467,402 		JBrowse link
G MSX1 msh homeobox 1 enables
contributes_to		 IEA
ISO		 (PMID:23371388)
(MGI:6874923|PMID:23371388)		 Ensembl
UniProt		 PMID:23371388 GO_REF:0000107 MGI:6874923 Ensembl chr 4:4,935,600...4,939,079 JBrowse link
G MSX2 msh homeobox 2 enables ISS UniProt GO_REF:0000024 NCBI chr 5:170,063,137...170,070,226
Ensembl chr 5:176,967,902...176,976,609 		JBrowse link
G MTERF3 mitochondrial transcription termination factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:92,864,512...92,886,757
Ensembl chr 8:95,062,088...95,084,035 		JBrowse link
G MZF1 myeloid zinc finger 1 enables IEA Ensembl GO_REF:0000107 NCBI chr19:55,575,212...55,585,473
Ensembl chr19:64,388,496...64,398,938 		JBrowse link
G NANOG Nanog homeobox enables ISO (PMID:25825768)
(PMID:20123909)		 UniProt
MGI		 PMID:20123909 PMID:25825768 NCBI chr12:7,913,037...7,919,715 JBrowse link
G NCOR1 nuclear receptor corepressor 1 enables ISO (MGI:3604169|PMID:16127449) BHF-UCL PMID:16127449 MGI:3604169 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NFATC2 nuclear factor of activated T cells 2 enables IEA Ensembl GO_REF:0000107 NCBI chr20:47,734,054...47,910,435
Ensembl chr20:48,858,238...49,034,007 		JBrowse link
G NFATC3 nuclear factor of activated T cells 3 enables ISO PMID:19538478
(MGI:5285124|PMID:21514407), (MGI:6871969|PMID:24970700), (MGI:7565895|PMID:19538478)		 UniProt PMID:19538478 PMID:21514407 PMID:24970700 MGI:5285124 MGI:6871969 MGI:7565895 RGD:401901216 NCBI chr16:48,456,144...48,603,306
Ensembl chr16:67,888,806...67,996,274 		JBrowse link
G NFATC4 nuclear factor of activated T cells 4 enables IEA Ensembl GO_REF:0000107 NCBI chr14:5,141,699...5,156,021
Ensembl chr14:23,266,702...23,279,249 		JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr2B:64,509,446...64,544,600
Ensembl chr2B:182,214,116...182,248,085 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 enables ISO
IEA		 RGD
Ensembl		 PMID:14576180 GO_REF:0000107 RGD:1358515 NCBI chr 4:94,925,048...95,040,849
Ensembl chr 4:105,589,062...105,704,098 		JBrowse link
G NFYA nuclear transcription factor Y subunit alpha contributes_to
enables		 ISO
IEA		 (PMID:11256944)
(PMID:15516209)		 ParkinsonsUK-UCL
MGI
Ensembl		 PMID:11256944 PMID:15516209 GO_REF:0000107 NCBI chr 6:40,661,407...40,688,440
Ensembl chr 6:41,969,561...41,996,963 		JBrowse link
G NFYB nuclear transcription factor Y subunit beta contributes_to
enables		 ISO
IEA		 (PMID:11256944)
(PMID:15516209)		 ParkinsonsUK-UCL
MGI
Ensembl		 PMID:11256944 PMID:15516209 GO_REF:0000107 NCBI chr12:101,693,559...101,714,057
Ensembl chr12:105,089,028...105,108,825 		JBrowse link
G NFYC nuclear transcription factor Y subunit gamma contributes_to ISO (PMID:11256944)
(PMID:15516209)		 ParkinsonsUK-UCL
MGI		 PMID:11256944 PMID:15516209 NCBI chr 1:39,984,716...40,064,464
Ensembl chr 1:41,304,194...41,383,615 		JBrowse link
G NKX2-1 NK2 homeobox 1 enables ISO (PMID:19176457)
(PMID:18632661)
(PMID:14960358), (PMID:1735431), (PMID:7559607)		 UniProt
MGI		 PMID:1735431 PMID:7559607 PMID:14960358 PMID:18632661 PMID:19176457
G NKX2-5 NK2 homeobox 5 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:168,584,197...168,589,406
Ensembl chr 5:175,492,288...175,495,514 		JBrowse link
G NKX3-1 NK3 homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:22,926,145...22,930,396
Ensembl chr 8:19,863,275...19,864,942 		JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 enables ISO
IEA		 RGD
Ensembl		 PMID:8015547 GO_REF:0000107 RGD:10448983 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600 		JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 contributes_to
enables		 ISO
IEA		 (PMID:18511497)
(MGI:4399016|PMID:17107947)		 BHF-UCL
Ensembl		 PMID:17107947 PMID:18511497 GO_REF:0000107 MGI:4399016 NCBI chr11:47,195,122...47,215,277
Ensembl chr11:47,748,353...47,768,672 		JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 enables ISO (PMID:26888176) UniProt PMID:26888176 NCBI chr12:98,052,778...98,144,085
Ensembl chr12:101,457,885...101,548,058 		JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:175,625,140...175,775,955
Ensembl chr 1:179,934,573...180,083,607 		JBrowse link
G OVOL2 ovo like zinc finger 2 enables ISO (PMID:19700410) BHF-UCL PMID:19700410 NCBI chr20:17,983,277...18,019,441
Ensembl chr20:17,962,123...17,994,486 		JBrowse link
G PAX2 paired box 2 enables IEA Ensembl GO_REF:0000107 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028 		JBrowse link
G PAX6 paired box 6 enables IEA Ensembl GO_REF:0000107 NCBI chr11:31,753,190...31,782,225
Ensembl chr11:31,641,813...31,664,474 		JBrowse link
G PAX8 paired box 8 enables IEA Ensembl GO_REF:0000107 NCBI chr2A:88,845,877...88,905,266
Ensembl chr2A:114,162,110...114,222,865 		JBrowse link
G PBX1 PBX homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:139,985,392...140,311,845
Ensembl chr 1:143,778,701...144,104,797 		JBrowse link
G PER1 period circadian regulator 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:43,502,080...43,518,098
Ensembl chr17:48,234,360...48,250,391 		JBrowse link
G PER2 period circadian regulator 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr2B:125,477,021...125,521,577
Ensembl chr2B:244,328,122...244,371,040 		JBrowse link
G PER3 period circadian regulator 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:6,547,667...6,607,905
Ensembl chr 1:7,795,552...7,855,922 		JBrowse link
G PIAS1 protein inhibitor of activated STAT 1 enables IEA Ensembl GO_REF:0000107 NCBI chr15:47,006,718...47,141,035
Ensembl chr15:65,276,530...65,410,105 		JBrowse link
G PITX2 paired like homeodomain 2 enables ISO (PMID:12612071), (PMID:9685346) BHF-UCL PMID:9685346 PMID:12612071 NCBI chr 4:103,112,624...103,137,356 JBrowse link
G POU2F1 POU class 2 homeobox 1 ISO RGD PMID:8632766 PMID:12818430 RGD:731231 RGD:9727455 NCBI chr 1:142,653,296...142,860,572
Ensembl chr 1:146,439,581...146,633,921 		JBrowse link
G POU2F2 POU class 2 homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chr19:38,974,635...39,065,103
Ensembl chr19:47,570,891...47,611,589 		JBrowse link
G POU5F1 POU class 5 homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:30,910,421...30,916,465
Ensembl chr 6:31,775,343...31,781,426 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma enables ISO (PMID:18293083)
(PMID:16127449), (PMID:21035761)
PMID:19383491
(MGI:3604169|PMID:16127449), (MGI:4881351|PMID:21035761)		 BHF-UCL
UniProt		 PMID:16127449 PMID:18293083 PMID:19383491 PMID:21035761 MGI:3604169 MGI:4881351 RGD:8553457 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060 		JBrowse link
G PRDM1 PR/SET domain 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:103,899,410...103,923,389
Ensembl chr 6:107,773,229...107,796,815 		JBrowse link
G PRDM16 PR/SET domain 16 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:1,730,122...2,100,636
Ensembl chr 1:2,981,667...3,234,251 		JBrowse link
G PRDM5 PR/SET domain 5 enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 4:112,896,606...113,127,400
Ensembl chr 4:124,036,911...124,252,928 		JBrowse link
G PRDM9 PR/SET domain 9 enables ISO (PMID:29072575) UniProt PMID:29072575 NCBI chr 5:86,847,131...86,856,802
Ensembl chr 5:92,377,523...92,395,486 		JBrowse link
G PROX1 prospero homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763 		JBrowse link
G RAD23B RAD23 homolog B, nucleotide excision repair protein enables ISO (PMID:25901318) MGI PMID:25901318 NCBI chr 9:78,433,461...78,482,157
Ensembl chr 9:106,622,377...106,670,317 		JBrowse link
G RARA retinoic acid receptor alpha enables IEA Ensembl GO_REF:0000107 NCBI chr17:16,932,485...16,980,958 JBrowse link
G RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit enables IEA Ensembl GO_REF:0000107 NCBI chr 1:180,688,220...180,724,087
Ensembl chr 1:184,974,254...185,010,065 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit enables IEA Ensembl GO_REF:0000107 NCBI chr11:61,012,839...61,022,225
Ensembl chr11:64,347,859...64,356,868 		JBrowse link
G REST RE1 silencing transcription factor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:66,984,466...67,012,301
Ensembl chr 4:73,526,085...73,582,242 		JBrowse link
G RFX3 regulatory factor X3 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:3,024,016...3,332,266
Ensembl chr 9:3,223,405...3,398,839 		JBrowse link
G RFX6 regulatory factor X6 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:114,686,132...114,741,072
Ensembl chr 6:118,828,973...118,883,884 		JBrowse link
G RNF10 ring finger protein 10 enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:118,117,486...118,160,341
Ensembl chr12:121,492,170...121,532,623 		JBrowse link
G RUNX1 RUNX family transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr21:21,159,586...21,423,946
Ensembl chr21:34,530,956...34,788,544 		JBrowse link
G RUNX2 RUNX family transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:45,003,962...45,133,148
Ensembl chr 6:46,189,432...46,524,389 		JBrowse link
G RXRA retinoid X receptor alpha contributes_to
enables		 ISO
IEA		 (MGI:4399016|PMID:17107947) BHF-UCL
Ensembl		 PMID:17107947 GO_REF:0000107 MGI:4399016 NCBI chr 9:105,424,046...105,539,241
Ensembl chr 9:134,082,865...134,144,704 		JBrowse link
G RXRB retinoid X receptor beta enables ISO (MGI:4820711|PMID:18922886)
(PMID:18922886)		 UniProt PMID:18922886 MGI:4820711 NCBI chr 6:32,765,818...32,772,876
Ensembl chr 6:33,880,758...33,887,820 		JBrowse link
G SFPQ splicing factor proline and glutamine rich enables ISO (MGI:5014424|PMID:21680841) UniProt PMID:21680841 MGI:5014424 NCBI chr 1:34,444,105...34,461,012
Ensembl chr 1:35,632,917...35,641,551 		JBrowse link
G SIX1 SIX homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr14:41,250,512...41,256,567
Ensembl chr14:59,515,324...59,527,494 		JBrowse link
G SMAD3 SMAD family member 3 enables IEA Ensembl GO_REF:0000107 NCBI chr15:46,013,764...46,143,126
Ensembl chr15:64,284,949...64,414,185 		JBrowse link
G SMAD4 SMAD family member 4 enables IEA Ensembl GO_REF:0000107 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359 		JBrowse link
G SMAD6 SMAD family member 6 enables IEA Ensembl GO_REF:0000107 NCBI chr15:45,648,709...45,728,821
Ensembl chr15:63,923,379...64,001,154 		JBrowse link
G SMARCA2 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:1,818,004...1,997,652
Ensembl chr 9:2,013,237...2,189,409 		JBrowse link
G SOX10 SRY-box transcription factor 10 enables IEA Ensembl GO_REF:0000107 NCBI chr22:18,885,679...18,897,927
Ensembl chr22:36,713,310...36,723,439 		JBrowse link
G SOX11 SRY-box transcription factor 11 enables ISO PMID:12637543
(PMID:18505825)
(MGI:3803393|PMID:18505825)		 GO_Central
UniProt		 PMID:12637543 PMID:18505825 MGI:3803393 RGD:8554307 NCBI chr2A:5,699,738...5,711,210 JBrowse link
G SOX12 SRY-box transcription factor 12 enables ISO (MGI:3803393|PMID:18505825) UniProt PMID:18505825 MGI:3803393 NCBI chr20:533,901...537,106 JBrowse link
G SOX13 SRY-box transcription factor 13 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:179,675,017...179,730,628
Ensembl chr 1:184,003,907...184,016,504 		JBrowse link
G SOX17 SRY-box transcription factor 17 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:50,883,088...50,885,542
Ensembl chr 8:48,257,287...48,259,808 		JBrowse link
G SOX18 SRY-box transcription factor 18 enables ISO (PMID:18065521)
(PMID:14634005), (PMID:18931657)		 UniProt
MGI		 PMID:14634005 PMID:18065521 PMID:18931657
G SOX2 SRY-box transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:178,744,881...178,747,392
Ensembl chr 3:186,922,705...186,923,662 		JBrowse link
G SOX4 SRY-box transcription factor 4 enables ISO (MGI:3803393|PMID:18505825) UniProt PMID:18505825 MGI:3803393 NCBI chr 6:21,422,846...21,427,779 JBrowse link
G SOX5 SRY-box transcription factor 5 enables IEA Ensembl GO_REF:0000107 NCBI chr12:62,361,631...62,780,805
Ensembl chr12:64,971,818...65,388,694 		JBrowse link
G SOX6 SRY-box transcription factor 6 enables IEA Ensembl GO_REF:0000107 NCBI chr11:16,053,730...16,488,566
Ensembl chr11:15,747,495...16,175,246 		JBrowse link
G SOX7 SRY-box transcription factor 7 enables ISO (MGI:4887547|PMID:19328208), (PMID:19515696)
(PMID:19328208), (PMID:19515696)		 MGI
BHF-UCL		 PMID:19328208 PMID:19515696 MGI:4887547 NCBI chr 8:8,476,357...8,483,144 JBrowse link
G SOX9 SRY-box transcription factor 9 enables ISO (MGI:86312|PMID:9119111), (PMID:17084361) UniProt PMID:9119111 PMID:17084361 MGI:86312 NCBI chr17:66,028,737...66,034,122 JBrowse link
G SP1 Sp1 transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr12:35,338,492...35,374,462
Ensembl chr12:36,127,681...36,158,356 		JBrowse link
G SPI1 Spi-1 proto-oncogene enables IEA Ensembl GO_REF:0000107 NCBI chr11:47,301,245...47,326,891
Ensembl chr11:47,853,991...47,880,259 		JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr22:22,725,790...22,799,749
Ensembl chr22:40,811,459...40,884,947 		JBrowse link
G STAT3 signal transducer and activator of transcription 3 enables IEA Ensembl GO_REF:0000107 NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase enables ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chr  X:40,993,911...41,007,362
Ensembl chr  X:48,855,494...48,868,131 		JBrowse link
G SUV39H2 SUV39H2 histone lysine methyltransferase enables ISO (MGI:5569417|PMID:24413057) UniProt PMID:24413057 MGI:5569417 NCBI chr10:14,882,491...14,907,724
Ensembl chr10:15,211,360...15,237,097 		JBrowse link
G TAF2 TATA-box binding protein associated factor 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:116,421,520...116,523,138
Ensembl chr 8:119,170,327...119,271,405 		JBrowse link
G TAF7 TATA-box binding protein associated factor 7 enables ISO (PMID:18391197) UniProt PMID:18391197 NCBI chr 5:136,680,554...136,682,862 JBrowse link
G TAF9 TATA-box binding protein associated factor 9 enables ISO (PMID:19251649) BHF-UCL PMID:19251649 NCBI chr 5:44,630,503...44,635,760 JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor enables IEA Ensembl GO_REF:0000107 NCBI chr 1:46,524,484...46,540,595
Ensembl chr 1:48,042,594...48,048,622 		JBrowse link
G TBL1X transducin beta like 1 X-linked enables IEA Ensembl GO_REF:0000107 NCBI chr  X:2,096,684...2,352,951
Ensembl chr  X:9,525,194...9,604,290 		JBrowse link
G TBL1XR1 TBL1X/Y related 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:174,067,964...174,251,913
Ensembl chr 3:182,247,335...182,429,619 		JBrowse link
G TBP TATA-box binding protein enables IEA Ensembl GO_REF:0000107 NCBI chr 6:168,714,214...168,732,744
Ensembl chr 6:173,800,240...173,826,909 		JBrowse link
G TBX21 T-box transcription factor 21 enables IEA Ensembl GO_REF:0000107 NCBI chr17:9,791,008...9,803,894
Ensembl chr17:9,973,920...9,985,660 		JBrowse link
G TCF12 transcription factor 12 contributes_to
enables		 ISO
IEA		 (PMID:11802795) BHF-UCL
Ensembl		 PMID:11802795 GO_REF:0000107 NCBI chr15:35,885,421...36,257,632
Ensembl chr15:54,202,862...54,570,440 		JBrowse link
G TCF20 transcription factor 20 enables ISO (PMID:7760812) MGI PMID:7760812 NCBI chr22:23,055,704...23,240,003
Ensembl chr22:41,124,871...41,180,013 		JBrowse link
G TCF3 transcription factor 3 contributes_to ISO (PMID:11802795) BHF-UCL PMID:11802795 Ensembl chr19:1,582,297...1,622,025 JBrowse link
G TCF7 transcription factor 7 enables ISO (PMID:18579517), (PMID:20128911) UniProt PMID:18579517 PMID:20128911 NCBI chr 5:129,518,134...129,549,972
Ensembl chr 5:135,671,095...135,702,734 		JBrowse link
G TCF7L2 transcription factor 7 like 2 enables IEA Ensembl GO_REF:0000107 NCBI chr10:109,541,524...109,759,499
Ensembl chr10:112,978,167...113,192,281 		JBrowse link
G TFAM transcription factor A, mitochondrial enables IEA TreeGrafter GO_REF:0000118 NCBI chr10:54,917,578...54,934,124
Ensembl chr10:57,138,437...57,147,972 		JBrowse link
G TFAP2A transcription factor AP-2 alpha enables ISO (PMID:12586840), (PMID:18718911), (PMID:31146003) ARUK-UCL PMID:12586840 PMID:18718911 PMID:31146003 NCBI chr 6:10,237,834...10,260,843 JBrowse link
G TFAP4 transcription factor AP-4 enables IEA Ensembl GO_REF:0000107 NCBI chr16:3,176,129...3,226,404
Ensembl chr16:4,348,929...4,368,525 		JBrowse link
G TFE3 transcription factor binding to IGHM enhancer 3 enables ISO (MGI:3662947|PMID:16936731)
(PMID:16936731)		 UniProt PMID:16936731 MGI:3662947 NCBI chr  X:41,326,802...41,341,574
Ensembl chr  X:49,182,795...49,197,194 		JBrowse link
G TFEB transcription factor EB enables IEA Ensembl GO_REF:0000107 NCBI chr 6:41,268,169...41,320,822
Ensembl chr 6:42,574,416...42,627,031 		JBrowse link
G THRA thyroid hormone receptor alpha enables IEA Ensembl GO_REF:0000107 NCBI chr17:17,196,459...17,226,263 JBrowse link
G TNF tumor necrosis factor enables IEA Ensembl GO_REF:0000107 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381 		JBrowse link
G TP53 tumor protein p53 enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TP63 tumor protein p63 enables IEA InterPro GO_REF:0000002 NCBI chr 3:186,651,879...186,918,300
Ensembl chr 3:195,199,167...195,474,104 		JBrowse link
G TP73 tumor protein p73 enables IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:2,323,399...2,405,295
Ensembl chr 1:3,476,064...3,529,206 		JBrowse link
G VSX1 visual system homeobox 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr20:25,011,149...25,025,545
Ensembl chr20:25,361,216...25,372,705 		JBrowse link
G WT1 WT1 transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr11:32,349,807...32,398,494
Ensembl chr11:32,238,720...32,287,249 		JBrowse link
G XBP1 X-box binding protein 1 enables ISO (PMID:23184933), (PMID:25190803)
(PMID:18556558)
(MGI:3798313|PMID:18556558)		 UniProt PMID:18556558 PMID:23184933 PMID:25190803 MGI:3798313 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 enables IEA Ensembl GO_REF:0000107 NCBI chr2B:103,371,459...103,468,419
Ensembl chr2B:221,972,742...222,071,235 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 enables IEA Ensembl GO_REF:0000107 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator enables IEA Ensembl GO_REF:0000107 NCBI chr11:97,061,367...97,186,961
Ensembl chr11:100,552,424...100,681,301 		JBrowse link
G YY1 YY1 transcription factor enables ISO (PMID:9857059) MGI PMID:9857059 NCBI chr14:80,859,491...80,903,651 JBrowse link
G ZBED2 zinc finger BED-type containing 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:108,739,338...108,741,826
Ensembl chr 3:115,664,606...115,665,262 		JBrowse link
G ZBED4 zinc finger BED-type containing 4 enables ISO (MGI:6234760|PMID:22693546)
(PMID:22693546)		 UniProt PMID:22693546 MGI:6234760 NCBI chr22:30,075,081...30,111,359 JBrowse link
G ZBED6 zinc finger BED-type containing 6 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:179,400,520...179,405,501
Ensembl chr 1:183,691,160...183,694,099 		JBrowse link
G ZBTB14 zinc finger and BTB domain containing 14 enables IEA Ensembl GO_REF:0000107 NCBI chr18:8,986,957...8,996,065
Ensembl chr18:11,303,612...11,309,749 		JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:111,445,520...112,275,946
Ensembl chr 3:118,389,250...118,431,453 		JBrowse link
G ZBTB46 zinc finger and BTB domain containing 46 enables IEA Ensembl GO_REF:0000107 Ensembl chr20:61,667,319...61,713,895 JBrowse link
G ZBTB48 zinc finger and BTB domain containing 48 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:5,341,282...5,350,590
Ensembl chr 1:6,594,372...6,603,367 		JBrowse link
G ZBTB8A zinc finger and BTB domain containing 8A enables IEA Ensembl GO_REF:0000107 NCBI chr 1:31,829,077...31,893,590
Ensembl chr 1:33,050,800...33,064,837 		JBrowse link
G ZFHX3 zinc finger homeobox 3 enables ISO (PMID:11312261) UniProt PMID:11312261 NCBI chr16:51,936,471...52,209,695
Ensembl chr16:72,635,666...72,808,360 		JBrowse link
G ZNF148 zinc finger protein 148 ISO RGD PMID:8943318 RGD:61784 NCBI chr 3:122,357,670...122,507,142
Ensembl chr 3:129,229,690...129,320,554 		JBrowse link
G ZNF174 zinc finger protein 174 enables IEA Ensembl GO_REF:0000107 NCBI chr16:2,324,551...2,332,736
Ensembl chr16:3,501,164...3,509,258 		JBrowse link
G ZNF217 zinc finger protein 217 enables IEA Ensembl GO_REF:0000107 NCBI chr20:49,919,084...49,949,693
Ensembl chr20:51,024,632...51,066,128 		JBrowse link
G ZNF263 zinc finger protein 263 enables IEA Ensembl GO_REF:0000107 NCBI chr16:2,217,739...2,232,168
Ensembl chr16:3,395,542...3,404,081 		JBrowse link
G ZNF281 zinc finger protein 281 enables ISO (PMID:10448078) UniProt PMID:10448078 NCBI chr 1:176,004,142...176,009,291 JBrowse link
G ZNF335 zinc finger protein 335 enables IEA Ensembl GO_REF:0000107 NCBI chr20:42,287,518...42,312,169
Ensembl chr20:43,374,591...43,397,724 		JBrowse link
G ZNF513 zinc finger protein 513 enables IEA Ensembl GO_REF:0000107 NCBI chr2A:27,381,102...27,384,980
Ensembl chr2A:27,469,512...27,473,068 		JBrowse link
G ZNF579 zinc finger protein 579 enables ISO (PMID:32096311) ARUK-UCL PMID:32096311 NCBI chr19:52,624,374...52,628,197 JBrowse link
G ZNF639 zinc finger protein 639 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:176,353,400...176,366,142
Ensembl chr 3:184,533,061...184,539,270 		JBrowse link
G ZNF658 zinc finger protein 658 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:38,535,161...38,556,153
Ensembl chr2A:41,108,936...41,140,460 		JBrowse link
G ZNF746 zinc finger protein 746 enables ISO (PMID:21376232) UniProt PMID:21376232 NCBI chr 7:141,204,918...141,230,220
Ensembl chr 7:153,682,142...153,705,552 		JBrowse link
G ZNF808 zinc finger protein 808 enables IEA Ensembl GO_REF:0000107 NCBI chr19:49,481,054...49,522,318
Ensembl chr19:58,412,939...58,426,454 		JBrowse link
cAMP response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:12196528 GO_REF:0000107 GO_REF:0000118 RGD:727574 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:94,762,796...94,836,304
Ensembl chr2B:212,891,261...212,958,130 		JBrowse link
G CREB3L1 cAMP responsive element binding protein 3 like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr11:46,236,384...46,280,145
Ensembl chr11:46,788,561...46,830,246 		JBrowse link
G CREB3L2 cAMP responsive element binding protein 3 like 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:129,833,446...129,960,145
Ensembl chr 7:142,331,759...142,452,438 		JBrowse link
G CREB5 cAMP responsive element binding protein 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:29,054,505...29,470,528
Ensembl chr 7:28,727,385...29,057,973 		JBrowse link
G E4F1 E4F transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr16:1,080,205...1,092,996
Ensembl chr16:2,323,461...2,335,695 		JBrowse link
G HMGA2 high mobility group AT-hook 2 enables ISO (PMID:14645522) UniProt PMID:14645522 NCBI chr12:22,954,946...23,096,623 JBrowse link
G JDP2 Jun dimerization protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr14:55,982,051...56,024,816
Ensembl chr14:74,828,944...74,870,087 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit enables ISO (PMID:19861239) BHF-UCL PMID:19861239 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G LOC100981854 cyclic AMP-dependent transcription factor ATF-7 enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:35,128,031...35,245,505
Ensembl chr12:35,914,378...36,021,141 		JBrowse link
G NR4A3 nuclear receptor subfamily 4 group A member 3 enables ISO (MGI:5543879|PMID:23897430) UniProt PMID:23897430 MGI:5543879 NCBI chr 9:70,907,056...70,950,221 JBrowse link
G TCF12 transcription factor 12 ISO RGD PMID:7683670 RGD:729997 NCBI chr15:35,885,421...36,257,632
Ensembl chr15:54,202,862...54,570,440 		JBrowse link
cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor enables IEA Ensembl GO_REF:0000107 NCBI chr 7:17,949,254...17,998,737
Ensembl chr 7:17,278,637...17,326,171 		JBrowse link
G ARNT aryl hydrocarbon receptor nuclear translocator enables IEA Ensembl GO_REF:0000107 NCBI chr 1:126,160,017...126,226,222
Ensembl chr 1:129,809,431...129,875,629 		JBrowse link
G ATF2 activating transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
G CTCF CCCTC-binding factor enables ISO (PMID:28636939) MGI PMID:28636939 NCBI chr16:47,906,503...47,983,271
Ensembl chr16:67,302,952...67,372,041 		JBrowse link
G CXXC1 CXXC finger protein 1 ISO RGD PMID:21814290 RGD:9587757 NCBI chr18:43,662,843...43,668,825
Ensembl chr18:47,010,650...47,014,937 		JBrowse link
G DMRT1 doublesex and mab-3 related transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:650,678...778,519
Ensembl chr 9:844,366...972,656 		JBrowse link
G E2F1 E2F transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr20:29,963,083...29,973,860
Ensembl chr20:31,103,764...31,110,604 		JBrowse link
G E2F2 E2F transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:22,696,695...22,722,840
Ensembl chr 1:23,683,293...23,707,951 		JBrowse link
G E2F3 E2F transcription factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:20,225,471...20,317,199
Ensembl chr 6:20,574,898...20,665,785 		JBrowse link
G E2F7 E2F transcription factor 7 enables IEA Ensembl GO_REF:0000107 NCBI chr12:74,540,049...74,582,561
Ensembl chr12:77,388,950...77,433,262 		JBrowse link
G E2F8 E2F transcription factor 8 enables IEA Ensembl GO_REF:0000107 NCBI chr11:19,250,045...19,267,629
Ensembl chr11:19,162,837...19,179,744 		JBrowse link
G ELL elongation factor for RNA polymerase II enables IEA TreeGrafter GO_REF:0000118 NCBI chr19:17,923,035...17,999,842
Ensembl chr19:18,894,054...18,969,923 		JBrowse link
G ELL2 elongation factor for RNA polymerase II 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 5:19,387,443...19,464,150
Ensembl chr 5:19,533,442...19,610,079 		JBrowse link
G ELL3 elongation factor for RNA polymerase II 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:22,732,742...22,737,522
Ensembl chr15:40,821,759...40,827,070 		JBrowse link
G EP300 E1A binding protein p300 ISO RGD PMID:19057620 RGD:2311715 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G EPAS1 endothelial PAS domain protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr2A:46,403,411...46,492,734
Ensembl chr2A:47,332,308...47,421,560 		JBrowse link
G ESRRB estrogen related receptor beta enables ISO (MGI:5529430|PMID:23508100), (MGI:5887187|PMID:26206133) UniProt PMID:23508100 PMID:26206133 MGI:5529430 MGI:5887187 NCBI chr14:56,868,361...57,060,552
Ensembl chr14:75,839,333...76,266,895 		JBrowse link
G FOXN2 forkhead box N2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr2A:48,441,683...48,506,631
Ensembl chr2A:49,364,147...49,428,502 		JBrowse link
G FOXN3 forkhead box N3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr14:69,778,191...70,238,813
Ensembl chr14:89,140,892...89,387,807 		JBrowse link
G FOXN4 forkhead box N4 enables IEA Ensembl GO_REF:0000107 NCBI chr12:106,855,308...106,886,508
Ensembl chr12:110,251,449...110,280,025 		JBrowse link
G GATA1 GATA binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:41,088,724...41,092,190
Ensembl chr  X:48,945,394...48,953,126 		JBrowse link
G GATA3 GATA binding protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G GATA4 GATA binding protein 4 enables ISO PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chr 8:7,442,921...7,526,731 JBrowse link
G GATA5 GATA binding protein 5 enables IEA Ensembl GO_REF:0000107 Ensembl chr20:60,148,359...60,158,886 JBrowse link
G GATA6 GATA binding protein 6 enables ISO PMID:20855530 UniProt PMID:20855530 RGD:8554432 NCBI chr18:15,411,764...15,444,402 JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:76,286,433...76,290,507
Ensembl chr 8:77,913,761...77,921,201 		JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:123,527,180...123,538,794
Ensembl chr 6:127,647,547...127,659,056 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885 		JBrowse link
G HMGA1 high mobility group AT-hook 1 enables ISO (PMID:9253416) CAFA PMID:9253416 NCBI chr 6:33,807,171...33,816,603 JBrowse link
G HMGB2 high mobility group box 2 enables ISO (MGI:5490149|PMID:23495099) AgBase PMID:23495099 MGI:5490149 NCBI chr 4:165,559,848...165,562,625
Ensembl chr 4:177,797,457...177,800,952 		JBrowse link
G HNF1B HNF1 homeobox B enables ISO
IEA		 RGD
Ensembl		 PMID:1673926 GO_REF:0000107 RGD:729944 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO RGD PMID:16640558 RGD:12904755 NCBI chr20:40,684,450...40,763,824
Ensembl chr20:41,779,034...41,856,536 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:15361071 RGD:10002777 NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756 		JBrowse link
G HOXA13 homeobox A13 enables ISO (PMID:27706137) MGI PMID:27706137 NCBI chr 7:27,838,656...27,844,562 JBrowse link
G HOXD13 homeobox D13 enables ISO (PMID:27706137) MGI PMID:27706137 NCBI chr2B:63,372,517...63,375,731 JBrowse link
G IRF4 interferon regulatory factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:206,282...226,487
Ensembl chr 6:342,718...356,654 		JBrowse link
G IRF7 interferon regulatory factor 7 enables IEA Ensembl GO_REF:0000107 Ensembl chr11:647,827...651,314 JBrowse link
G ISL1 ISL LIM homeobox 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 5:62,635,095...62,650,141
Ensembl chr 5:64,252,715...64,264,674 		JBrowse link
G ISL2 ISL LIM homeobox 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr15:55,250,837...55,257,775
Ensembl chr15:74,843,797...74,848,635 		JBrowse link
G LEF1 lymphoid enhancer binding factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:100,552,959...100,674,156
Ensembl chr 4:111,125,312...111,245,980 		JBrowse link
G LHX1 LIM homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751 		JBrowse link
G LOC100987123 zinc finger protein 595 enables ISO (PMID:22801370) MGI PMID:22801370 NCBI chr 4:50,243...92,219 JBrowse link
G MEF2C myocyte enhancer factor 2C enables ISO (PMID:16140986), (PMID:20399744) MGI PMID:16140986 PMID:20399744 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr15:68,440,626...68,441,935
Ensembl chr15:87,645,768...87,647,210 		JBrowse link
G MIXL1 Mix paired-like homeobox enables ISO (MGI:5448504|PMID:22265737) BHF-UCL PMID:22265737 MGI:5448504 NCBI chr 1:201,682,488...201,686,358 JBrowse link
G MSX1 msh homeobox 1 enables IEA Ensembl GO_REF:0000107 Ensembl chr 4:4,935,600...4,939,079 JBrowse link
G MTF1 metal regulatory transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:37,088,744...37,134,318
Ensembl chr 1:38,438,294...38,482,142 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor enables ISO (PMID:15511642) MGI PMID:15511642 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863 		JBrowse link
G MYOD1 myogenic differentiation 1 enables IEA Ensembl GO_REF:0000107 NCBI chr11:17,772,317...17,774,884
Ensembl chr11:17,456,124...17,458,690 		JBrowse link
G MYOG myogenin enables IEA Ensembl GO_REF:0000107 NCBI chr 1:178,684,933...178,687,971
Ensembl chr 1:182,979,700...182,982,611 		JBrowse link
G MYT1 myelin transcription factor 1 enables ISO (PMID:17442045) MGI PMID:17442045 Ensembl chr20:62,108,924...62,151,936 JBrowse link
G NFE2 nuclear factor, erythroid 2 contributes_to
enables		 ISO
IEA		 (PMID:16263792) GO_Central
Ensembl		 PMID:16263792 GO_REF:0000107 NCBI chr12:34,442,913...34,452,016
Ensembl chr12:35,168,173...35,177,253 		JBrowse link
G NFIC nuclear factor I C ISO RGD PMID:10521600 RGD:633408 NCBI chr19:2,387,226...2,495,475
Ensembl chr19:3,294,319...3,440,417 		JBrowse link
G NKX2-2 NK2 homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chr20:21,468,872...21,480,627
Ensembl chr20:21,429,401...21,432,492 		JBrowse link
G NOTCH1 notch receptor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
G NOTCH2 notch receptor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840 		JBrowse link
G NOTCH4 notch receptor 4 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:31,842,233...31,871,412
Ensembl chr 6:32,722,112...32,750,978 		JBrowse link
G NR1D2 nuclear receptor subfamily 1 group D member 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:23,857,317...23,892,533
Ensembl chr 3:24,185,798...24,215,831 		JBrowse link
G PAX2 paired box 2 enables IEA Ensembl GO_REF:0000107 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028 		JBrowse link
G POU5F1 POU class 5 homeobox 1 enables ISO (MGI:5490149|PMID:23495099) AgBase PMID:23495099 MGI:5490149 NCBI chr 6:30,910,421...30,916,465
Ensembl chr 6:31,775,343...31,781,426 		JBrowse link
G RUNX2 RUNX family transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:45,003,962...45,133,148
Ensembl chr 6:46,189,432...46,524,389 		JBrowse link
G SALL1 spalt like transcription factor 1 enables ISO (MGI:4946171|PMID:21062744) BHF-UCL PMID:21062744 MGI:4946171 NCBI chr16:31,396,399...31,412,753
Ensembl chr16:50,274,090...50,284,819 		JBrowse link
G SCX scleraxis bHLH transcription factor enables ISO (PMID:17430895) MGI PMID:17430895 NCBI chr 8:141,027,765...141,031,194 JBrowse link
G SMAD3 SMAD family member 3 enables IEA Ensembl GO_REF:0000107 NCBI chr15:46,013,764...46,143,126
Ensembl chr15:64,284,949...64,414,185 		JBrowse link
G SOX11 SRY-box transcription factor 11 enables ISO (MGI:5285123|PMID:21527504), (MGI:5285167|PMID:19808959)
(PMID:19808959), (PMID:21527504)		 UniProt PMID:19808959 PMID:21527504 MGI:5285123 MGI:5285167 NCBI chr2A:5,699,738...5,711,210 JBrowse link
G SOX5 SRY-box transcription factor 5 enables ISO PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chr12:62,361,631...62,780,805
Ensembl chr12:64,971,818...65,388,694 		JBrowse link
G SOX6 SRY-box transcription factor 6 enables ISO PMID:26150426 UniProt PMID:26150426 RGD:11526869 NCBI chr11:16,053,730...16,488,566
Ensembl chr11:15,747,495...16,175,246 		JBrowse link
G SOX8 SRY-box transcription factor 8 enables ISO (PMID:12732652), (PMID:15102707) MGI PMID:12732652 PMID:15102707
G SOX9 SRY-box transcription factor 9 enables ISO (PMID:10805756)
(PMID:10805756), (PMID:17525254), (PMID:22500632)
(MGI:5142387|PMID:10805756), (MGI:5284779|PMID:17525254), (PMID:22500632)
PMID:26150426		 UniProt
MGI		 PMID:10805756 PMID:17525254 PMID:22500632 PMID:26150426 MGI:5142387 MGI:5284779 RGD:11526869 RGD:8553866 NCBI chr17:66,028,737...66,034,122 JBrowse link
G SP1 Sp1 transcription factor enables ISO (PMID:15511642), (PMID:19943855), (PMID:9705320) MGI PMID:9705320 PMID:15511642 PMID:19943855 NCBI chr12:35,338,492...35,374,462
Ensembl chr12:36,127,681...36,158,356 		JBrowse link
G SP3 Sp3 transcription factor enables ISO (PMID:15511642), (PMID:19943855) MGI PMID:15511642 PMID:19943855 NCBI chr2B:61,185,975...61,243,155
Ensembl chr2B:178,639,677...178,692,848 		JBrowse link
G SPI1 Spi-1 proto-oncogene enables IEA Ensembl GO_REF:0000107 NCBI chr11:47,301,245...47,326,891
Ensembl chr11:47,853,991...47,880,259 		JBrowse link
G SRF serum response factor enables IEA InterPro GO_REF:0000002 NCBI chr 6:42,763,099...42,773,332
Ensembl chr 6:44,057,192...44,066,768 		JBrowse link
G TCF3 transcription factor 3 enables ISO (PMID:16140986) MGI PMID:16140986 Ensembl chr19:1,582,297...1,622,025 JBrowse link
G TFAP2A transcription factor AP-2 alpha enables ISO (PMID:19943855) MGI PMID:19943855 NCBI chr 6:10,237,834...10,260,843 JBrowse link
G TFAP2B transcription factor AP-2 beta enables IEA Ensembl GO_REF:0000107 NCBI chr 6:50,376,157...50,406,740
Ensembl chr 6:51,635,899...51,664,691 		JBrowse link
G TFCP2 transcription factor CP2 enables IEA Ensembl GO_REF:0000107 NCBI chr12:37,580,263...37,659,680
Ensembl chr12:38,486,340...38,563,299 		JBrowse link
G TFDP1 transcription factor Dp-1 enables ISO (PMID:15448153) MGI PMID:15448153 NCBI chr13:94,730,343...94,789,328
Ensembl chr13:113,789,280...113,840,825 		JBrowse link
G TIPARP TCDD inducible poly(ADP-ribose) polymerase enables IEA Ensembl GO_REF:0000107 NCBI chr 3:153,730,307...153,762,442
Ensembl chr 3:161,783,999...161,816,525 		JBrowse link
G TP53 tumor protein p53 enables IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TUG1 taurine up-regulated 1 enables ISO (PMID:27760051) MGI PMID:27760051
G TWIST1 twist family bHLH transcription factor 1 enables ISO (PMID:27027434) BHF-UCL PMID:27027434 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G UHRF1 ubiquitin like with PHD and ring finger domains 1 enables IEA Ensembl GO_REF:0000107 NCBI chr19:3,926,583...3,979,163
Ensembl chr19:4,872,753...4,925,330 		JBrowse link
G XBP1 X-box binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943 		JBrowse link
G YY1 YY1 transcription factor enables ISO (PMID:16260628)
(PMID:15329343)		 UniProt
AgBase		 PMID:15329343 PMID:16260628 NCBI chr14:80,859,491...80,903,651 JBrowse link
G YY2 YY2 transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr  X:14,486,444...14,489,457
Ensembl chr  X:21,842,693...21,843,812 		JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B enables IEA Ensembl GO_REF:0000107 NCBI chr 1:130,350,798...130,366,690
Ensembl chr 1:133,959,847...133,975,729 		JBrowse link
G ZNF322 zinc finger protein 322 enables ISO (MGI:6114965|PMID:24550733)
(PMID:24550733)		 UniProt PMID:24550733 MGI:6114965 NCBI chr 6:26,466,052...26,491,433
Ensembl chr 6:27,126,531...27,127,739 		JBrowse link
G ZNF395 zinc finger protein 395 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:27,625,110...27,682,445
Ensembl chr 8:24,825,006...24,845,371 		JBrowse link
G ZNF516 zinc finger protein 516 enables IEA Ensembl GO_REF:0000107 NCBI chr18:69,748,472...69,891,026
Ensembl chr18:73,026,076...73,103,609 		JBrowse link
G ZNF704 zinc finger protein 704 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:77,158,942...77,399,102
Ensembl chr 8:78,790,357...79,022,513 		JBrowse link
core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:35,148,984...35,196,252
Ensembl chr 1:36,324,733...36,360,832 		JBrowse link
G AGO2 argonaute RISC catalytic component 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125 		JBrowse link
G DRAP1 DR1 associated protein 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr11:61,279,681...61,281,881
Ensembl chr11:64,608,245...64,610,031 		JBrowse link
G FOXP1 forkhead box P1 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173 		JBrowse link
G HDAC1 histone deacetylase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410 		JBrowse link
G ISL1 ISL LIM homeobox 1 ISO RGD PMID:11043578 RGD:8554127 NCBI chr 5:62,635,095...62,650,141
Ensembl chr 5:64,252,715...64,264,674 		JBrowse link
G JPH2 junctophilin 2 enables ISO (MGI:6270069|PMID:30409805) UniProt PMID:30409805 MGI:6270069 NCBI chr20:40,439,975...40,517,438 JBrowse link
G KCNIP3 potassium voltage-gated channel interacting protein 3 enables ISO (MGI:5882899|PMID:15746104)
(PMID:15746104)		 CAFA PMID:15746104 MGI:5882899 NCBI chr2A:104,018,539...104,111,126
Ensembl chr2A:96,200,412...96,291,374 		JBrowse link
G KLF10 KLF transcription factor 10 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:99,302,943...99,310,099
Ensembl chr 8:101,462,915...101,469,982 		JBrowse link
G LOC100983103 surfactant-associated protein 3 enables ISO PMID:9425125 CAFA PMID:9425125 RGD:12792996 NCBI chr14:17,224,870...17,273,252
Ensembl chr14:35,404,127...35,626,722 		JBrowse link
G MMP12 matrix metallopeptidase 12 enables IEA Ensembl GO_REF:0000107 NCBI chr11:97,809,644...97,822,063
Ensembl chr11:101,294,475...101,306,762 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863 		JBrowse link
G NPM1 nucleophosmin 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:166,735,904...166,756,321
Ensembl chr 5:173,490,197...173,510,656 		JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269 		JBrowse link
G POLR2A RNA polymerase II subunit A enables IEA Ensembl GO_REF:0000107 NCBI chr17:7,516,940...7,546,989
Ensembl chr17:7,502,807...7,532,521 		JBrowse link
G SNAPC3 small nuclear RNA activating complex polypeptide 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 9:15,239,729...15,283,644
Ensembl chr 9:15,743,397...15,782,323 		JBrowse link
G TAF4 TATA-box binding protein associated factor 4 contributes_to ISO (PMID:15601843) GO_Central PMID:15601843 NCBI chr20:58,341,086...58,431,623 JBrowse link
G TBP TATA-box binding protein enables IEA Ensembl GO_REF:0000107 NCBI chr 6:168,714,214...168,732,744
Ensembl chr 6:173,800,240...173,826,909 		JBrowse link
G TP53 tumor protein p53 enables IEA Ensembl GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G ZBTB17 zinc finger and BTB domain containing 17 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:15,080,880...15,113,676
Ensembl chr 1:16,074,005...16,106,700 		JBrowse link
E-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor enables ISO (MGI:4820700|PMID:20106950)
(PMID:20106950)		 UniProt PMID:20106950 MGI:4820700 NCBI chr 7:17,949,254...17,998,737
Ensembl chr 7:17,278,637...17,326,171 		JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G ASCL2 achaete-scute family bHLH transcription factor 2 enables ISO (PMID:14561729) UniProt PMID:14561729 NCBI chr11:2,305,497...2,308,080 JBrowse link
G ATOH1 atonal bHLH transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 4:86,188,534...86,191,301
Ensembl chr 4:96,863,762...96,864,832 		JBrowse link
G ATOH8 atonal bHLH transcription factor 8 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:85,803,414...85,837,858
Ensembl chr2A:87,352,904...87,362,938 		JBrowse link
G BHLHA15 basic helix-loop-helix family member a15 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:6,306,929...6,311,026
Ensembl chr 7:103,677,022...103,677,593 		JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:4,927,487...4,933,215
Ensembl chr 3:5,028,515...5,032,470 		JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 enables IEA Ensembl GO_REF:0000107 NCBI chr12:60,194,758...60,199,344 JBrowse link
G BMAL1 basic helix-loop-helix ARNT like 1 enables IEA Ensembl GO_REF:0000107 NCBI chr11:13,436,580...13,547,135
Ensembl chr11:13,163,028...13,240,376 		JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 enables IEA Ensembl GO_REF:0000107 NCBI chr12:58,885,410...58,977,832
Ensembl chr12:61,503,973...61,596,580 		JBrowse link
G CIART circadian associated repressor of transcription enables IEA Ensembl GO_REF:0000107 NCBI chr 1:125,627,812...125,632,367
Ensembl chr 1:129,278,742...129,283,271 		JBrowse link
G CLOCK clock circadian regulator enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726 		JBrowse link
G CRY1 cryptochrome circadian regulator 1 enables IEA Ensembl GO_REF:0000107 NCBI chr12:104,558,874...104,658,833
Ensembl chr12:107,954,262...108,052,484 		JBrowse link
G FIGLA folliculogenesis specific bHLH transcription factor contributes_to
enables		 ISO
IEA		 (PMID:15044608) UniProt
Ensembl		 PMID:15044608 GO_REF:0000107 NCBI chr2A:70,840,305...70,853,542
Ensembl chr2A:71,954,124...71,967,339 		JBrowse link
G GATA3 GATA binding protein 3 enables IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 contributes_to
enables		 ISO (MGI:4362015|PMID:11812799)
(PMID:11812799)
(PMID:20144608)
(PMID:15486975)		 BHF-UCL
MGI
UniProt		 PMID:11812799 PMID:15486975 PMID:20144608 MGI:4362015 NCBI chr 4:165,755,000...165,758,735 JBrowse link
G HDAC1 histone deacetylase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410 		JBrowse link
G HES1 hes family bHLH transcription factor 1 enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:19670267 GO_REF:0000107 GO_REF:0000118 RGD:9685170 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885 		JBrowse link
G MAX MYC associated factor X enables IEA Ensembl GO_REF:0000107 NCBI chr14:45,588,366...45,683,828
Ensembl chr14:64,535,120...64,562,671 		JBrowse link
G MITF melanocyte inducing transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr 3:69,674,064...69,902,078
Ensembl chr 3:71,037,665...71,265,445 		JBrowse link
G MYBBP1A MYB binding protein 1a enables IEA Ensembl GO_REF:0000107 NCBI chr17:4,593,741...4,610,203
Ensembl chr17:4,586,431...4,603,097 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor enables IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863 		JBrowse link
G MYOD1 myogenic differentiation 1 enables ISO
IEA		 RGD
Ensembl		 PMID:11600477 GO_REF:0000107 RGD:9686083 NCBI chr11:17,772,317...17,774,884
Ensembl chr11:17,456,124...17,458,690 		JBrowse link
G MYOG myogenin enables IEA Ensembl GO_REF:0000107 NCBI chr 1:178,684,933...178,687,971
Ensembl chr 1:182,979,700...182,982,611 		JBrowse link
G NEUROD1 neuronal differentiation 1 enables ISO (PMID:14752053)
(MGI:2686763|PMID:14697366)		 UniProt PMID:14697366 PMID:14752053 MGI:2686763 NCBI chr2B:68,939,341...68,943,516 JBrowse link
G NEUROD2 neuronal differentiation 2 enables ISO (MGI:2686763|PMID:14697366), (MGI:3789797|PMID:18214987)
(PMID:14697366), (PMID:18214987)		 UniProt PMID:14697366 PMID:18214987 MGI:2686763 MGI:3789797 NCBI chr17:17,680,415...17,685,053 JBrowse link
G NEUROG1 neurogenin 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:130,922,727...130,924,403
Ensembl chr 5:137,064,339...137,065,052 		JBrowse link
G NEUROG2 neurogenin 2 enables ISO (MGI:2686763|PMID:14697366) UniProt PMID:14697366 MGI:2686763 NCBI chr 4:105,002,447...105,005,704 JBrowse link
G NEUROG3 neurogenin 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr10:66,039,739...66,041,804
Ensembl chr10:68,571,614...68,572,258 		JBrowse link
G NPAS2 neuronal PAS domain protein 2 enables IEA TreeGrafter GO_REF:0000118 Ensembl chr2A:101,868,933...101,972,866 JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 enables IEA Ensembl GO_REF:0000107 NCBI chr17:17,188,390...17,196,315
Ensembl chr17:17,409,669...17,417,600 		JBrowse link
G OLIG3 oligodendrocyte transcription factor 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 6:135,245,422...135,248,355
Ensembl chr 6:139,333,938...139,334,756 		JBrowse link
G PER1 period circadian regulator 1 enables IEA Ensembl GO_REF:0000107 NCBI chr17:43,502,080...43,518,098
Ensembl chr17:48,234,360...48,250,391 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma enables ISO (MGI:3830801|PMID:19041764)
(PMID:19041764)		 UniProt PMID:19041764 MGI:3830801 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060 		JBrowse link
G PRMT5 protein arginine methyltransferase 5 enables ISO (MGI:5464222|PMID:23133559) UniProt PMID:23133559 MGI:5464222 NCBI chr14:3,737,741...3,746,646
Ensembl chr14:21,836,984...21,846,018 		JBrowse link
G PTF1A pancreas associated transcription factor 1a enables ISO (PMID:22232429) MGI PMID:22232429 NCBI chr10:23,356,165...23,359,579 JBrowse link
G SCX scleraxis bHLH transcription factor contributes_to
enables		 ISO (PMID:10775504)
(MGI:4418577|PMID:20059955), (MGI:72077|PMID:7743923)
(MGI:5294531|PMID:19828133)		 UniProtKB
UniProt		 PMID:7743923 PMID:10775504 PMID:19828133 PMID:20059955 MGI:4418577 MGI:5294531 MGI:72077 NCBI chr 8:141,027,765...141,031,194 JBrowse link
G SNAI1 snail family transcriptional repressor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr20:46,321,075...46,328,865
Ensembl chr20:47,384,818...47,390,733 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:45,341,857...45,345,544
Ensembl chr 8:42,723,971...42,730,904 		JBrowse link
G SPZ1 spermatogenic leucine zipper 1 enables ISO (PMID:30541061) MGI PMID:30541061 NCBI chr 5:34,995,430...34,997,935
Ensembl chr 5:35,269,377...35,270,670 		JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr22:22,725,790...22,799,749
Ensembl chr22:40,811,459...40,884,947 		JBrowse link
G TAL1 TAL bHLH transcription factor 1, erythroid differentiation factor enables IEA Ensembl GO_REF:0000107 NCBI chr 1:46,524,484...46,540,595
Ensembl chr 1:48,042,594...48,048,622 		JBrowse link
G TCF12 transcription factor 12 enables IEA Ensembl GO_REF:0000107 NCBI chr15:35,885,421...36,257,632
Ensembl chr15:54,202,862...54,570,440 		JBrowse link
G TCF15 transcription factor 15 enables IEA Ensembl GO_REF:0000107 NCBI chr20:811,907...817,971 JBrowse link
G TCF21 transcription factor 21 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:131,656,582...131,662,983
Ensembl chr 6:135,754,896...135,761,294 		JBrowse link
G TCF3 transcription factor 3 contributes_to
enables		 ISO
IEA		 PMID:19828133
(PMID:15044608)
(MGI:4362015|PMID:11812799)
(PMID:10775504)		 UniProt
Ensembl
BHF-UCL
UniProtKB		 PMID:10775504 PMID:11812799 PMID:15044608 PMID:19828133 GO_REF:0000107 MGI:4362015 RGD:8553796 Ensembl chr19:1,582,297...1,622,025 JBrowse link
G TCF4 transcription factor 4 enables ISO (MGI:3789797|PMID:18214987), (MGI:85411|PMID:8978694) BHF-UCL PMID:8978694 PMID:18214987 MGI:3789797 MGI:85411 NCBI chr18:48,603,069...48,969,010
Ensembl chr18:51,938,357...52,352,030 		JBrowse link
G TFAP4 transcription factor AP-4 enables IEA Ensembl GO_REF:0000107 NCBI chr16:3,176,129...3,226,404
Ensembl chr16:4,348,929...4,368,525 		JBrowse link
G TFE3 transcription factor binding to IGHM enhancer 3 enables ISO (MGI:7510300|PMID:20713358) UniProt PMID:20713358 MGI:7510300 NCBI chr  X:41,326,802...41,341,574
Ensembl chr  X:49,182,795...49,197,194 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 enables ISO (PMID:17332325), (PMID:20804746)
(MGI:3623529|PMID:16502419), (MGI:4838344|PMID:20804746)
(MGI:5528778|PMID:24011070)		 BHF-UCL PMID:16502419 PMID:17332325 PMID:20804746 PMID:24011070 MGI:3623529 MGI:4838344 MGI:5528778 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G ZEB1 zinc finger E-box binding homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr10:31,449,202...31,659,534
Ensembl chr10:32,046,491...32,253,550 		JBrowse link
estrogen response element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor enables IEA TreeGrafter GO_REF:0000118 NCBI chr  X:56,722,828...56,909,004
Ensembl chr  X:66,791,081...66,969,357 		JBrowse link
G ESR1 estrogen receptor 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:149,507,599...149,918,523
Ensembl chr 6:154,317,002...154,631,551 		JBrowse link
G ESR2 estrogen receptor 2 enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:9600083 GO_REF:0000107 GO_REF:0000118 RGD:728646 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303 		JBrowse link
G ESRRA estrogen related receptor alpha enables IEA TreeGrafter GO_REF:0000118 NCBI chr11:59,662,565...59,673,789
Ensembl chr11:63,009,295...63,018,744 		JBrowse link
G ESRRB estrogen related receptor beta enables IEA TreeGrafter GO_REF:0000118 NCBI chr14:56,868,361...57,060,552
Ensembl chr14:75,839,333...76,266,895 		JBrowse link
G ESRRG estrogen related receptor gamma enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:192,074,260...192,667,610
Ensembl chr 1:196,929,197...197,153,195 		JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269 		JBrowse link
G NR3C2 nuclear receptor subfamily 3 group C member 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 4:140,418,624...140,785,180
Ensembl chr 4:152,108,508...152,430,298 		JBrowse link
G PGR progesterone receptor enables IEA TreeGrafter GO_REF:0000118 NCBI chr11:95,997,677...96,098,866 JBrowse link
G TRIM24 tripartite motif containing 24 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:130,420,334...130,547,489
Ensembl chr 7:142,909,009...143,036,526 		JBrowse link
intronic transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL6 BCL6 transcription repressor enables IEA Ensembl GO_REF:0000107 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:98,129,147...98,308,120
Ensembl chr 8:100,308,575...100,471,830 		JBrowse link
G NKX2-1 NK2 homeobox 1 enables ISO (PMID:23143308)
(PMID:22955271)
(MGI:5613464|PMID:22955271)		 MGI
UniProt		 PMID:22955271 PMID:23143308 MGI:5613464
G THRA thyroid hormone receptor alpha ISO RGD PMID:20368265 RGD:2324624 NCBI chr17:17,196,459...17,226,263 JBrowse link
mitochondrial promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC117976577 DNA-directed RNA polymerase, mitochondrial-like enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:56,237,677...56,241,440 JBrowse link
G LONP1 lon peptidase 1, mitochondrial NOT|enables ISO
IEA		 (PMID:9485316)
(PMID:12657466)		 UniProt
MGI
Ensembl		 PMID:9485316 PMID:12657466 GO_REF:0000107 NCBI chr19:4,709,062...4,735,653
Ensembl chr19:5,644,525...5,670,956 		JBrowse link
G POLRMT RNA polymerase mitochondrial enables IEA TreeGrafter GO_REF:0000118 NCBI chr19:504,823...521,281
Ensembl chr19:584,219...599,783 		JBrowse link
G TFAM transcription factor A, mitochondrial enables IEA Ensembl GO_REF:0000107 NCBI chr10:54,917,578...54,934,124
Ensembl chr10:57,138,437...57,147,972 		JBrowse link
N-box binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 enables ISO
IEA		 RGD
Ensembl
TreeGrafter		 PMID:22302822 GO_REF:0000107 GO_REF:0000118 RGD:9685391 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257 		JBrowse link
purine-rich negative regulatory element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELK3 ETS transcription factor ELK3 enables IEA Ensembl GO_REF:0000107 NCBI chr12:93,781,034...93,863,042
Ensembl chr12:97,223,198...97,276,120 		JBrowse link
G PURA purine rich element binding protein A enables IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:135,541,865...135,610,526
Ensembl chr 5:141,659,224...141,727,870 		JBrowse link
G PURB purine rich element binding protein B enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 7:45,590,183...45,600,089
Ensembl chr 7:45,667,233...45,668,159 		JBrowse link
G PURG purine rich element binding protein G enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 8:30,315,336...30,353,180
Ensembl chr 8:27,503,358...27,540,290 		JBrowse link
retinoic acid-responsive element binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYT1L myelin transcription factor 1 like enables ISO PMID:10606515 RGD
CAFA		 PMID:8631881 PMID:10606515 RGD:12793025 RGD:633486 NCBI chr2A:1,744,466...2,332,146
Ensembl chr2A:1,735,673...1,927,123 		JBrowse link
G NR2F1 nuclear receptor subfamily 2 group F member 1 ISO RGD PMID:7797489 RGD:633499 NCBI chr 5:21,773,283...21,785,746
Ensembl chr 5:21,910,463...21,918,776 		JBrowse link
G RARA retinoic acid receptor alpha enables ISO (PMID:19917671) UniProt PMID:19917671 NCBI chr17:16,932,485...16,980,958 JBrowse link
G RXRA retinoid X receptor alpha enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:105,424,046...105,539,241
Ensembl chr 9:134,082,865...134,144,704 		JBrowse link
G RXRB retinoid X receptor beta enables IEA TreeGrafter GO_REF:0000118 NCBI chr 6:32,765,818...32,772,876
Ensembl chr 6:33,880,758...33,887,820 		JBrowse link
G RXRG retinoid X receptor gamma enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:140,832,717...140,877,046
Ensembl chr 1:144,623,133...144,723,494 		JBrowse link
G ZNF536 zinc finger protein 536 enables IEA Ensembl GO_REF:0000107 NCBI chr19:27,145,499...27,634,609
Ensembl chr19:35,904,282...36,387,805 		JBrowse link
RNA polymerase I cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIH1D1 PIH1 domain containing 1 NOT|enables ISO (PMID:22368283) UniProt PMID:22368283 NCBI chr19:46,459,855...46,465,882
Ensembl chr19:55,381,803...55,387,664 		JBrowse link
G UBTF upstream binding transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr17:13,176,228...13,191,283
Ensembl chr17:13,343,349...13,356,836 		JBrowse link
RNA polymerase I core promoter sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAZ2A bromodomain adjacent to zinc finger domain 2A contributes_to ISO (PMID:22368283) GO_Central PMID:22368283 NCBI chr12:32,274,240...32,313,839
Ensembl chr12:32,529,634...32,566,248 		JBrowse link
G RRN3 RRN3 homolog, RNA polymerase I transcription factor enables ISO (PMID:22368283) UniProt PMID:22368283 NCBI chr16:13,664,478...13,700,942 JBrowse link
G SMARCA4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 contributes_to
enables		 ISO
IEA		 (PMID:22368283) GO_Central
Ensembl		 PMID:22368283 GO_REF:0000107 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952 		JBrowse link
G SMARCB1 SWI/SNF related BAF chromatin remodeling complex subunit B1 contributes_to
enables		 ISO
IEA		 (PMID:22368283) GO_Central
Ensembl		 PMID:22368283 GO_REF:0000107 NCBI chr22:4,542,764...4,589,461
Ensembl chr22:22,627,982...22,673,921 		JBrowse link
G TAF1B TATA-box binding protein associated factor, RNA polymerase I subunit B enables IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:9,834,385...9,927,129
Ensembl chr2A:9,996,146...10,087,740 		JBrowse link
G TAF1C TATA-box binding protein associated factor, RNA polymerase I subunit C enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:64,843,197...64,852,408
Ensembl chr16:84,184,928...84,194,147 		JBrowse link
G TBP TATA-box binding protein enables IEA Ensembl GO_REF:0000107 NCBI chr 6:168,714,214...168,732,744
Ensembl chr 6:173,800,240...173,826,909 		JBrowse link
G UBTF upstream binding transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr17:13,176,228...13,191,283
Ensembl chr17:13,343,349...13,356,836 		JBrowse link
RNA polymerase I transcription regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEBPA CCAAT enhancer binding protein alpha enables ISO (PMID:20075868) UniProt PMID:20075868 NCBI chr19:30,223,567...30,226,204 JBrowse link
RNA polymerase II cis-regulatory region sequence-specific DNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 enables ISO (PMID:22053081) MGI PMID:22053081 NCBI chr 1:35,148,984...35,196,252
Ensembl chr 1:36,324,733...36,360,832 		JBrowse link
G ANHX anomalous homeobox enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:130,698,480...130,716,093
Ensembl chr12:135,301,809...135,317,945 		JBrowse link
G APP amyloid beta precursor protein enables IEA Ensembl GO_REF:0000107 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072 		JBrowse link
G AR androgen receptor enables IEA Ensembl GO_REF:0000107 NCBI chr  X:56,722,828...56,909,004
Ensembl chr  X:66,791,081...66,969,357 		JBrowse link
G ARGFX arginine-fifty homeobox enables IEA TreeGrafter GO_REF:0000118 NCBI chr 3:118,670,123...118,692,774
Ensembl chr 3:125,582,839...125,598,563 		JBrowse link
G ARID3C AT-rich interaction domain 3C enables ISO (MGI:5295129|PMID:21955986) NTNU_SB PMID:21955986 MGI:5295129 NCBI chr 9:34,457,638...34,466,425
Ensembl chr 9:35,267,063...35,275,057 		JBrowse link
G ARNT aryl hydrocarbon receptor nuclear translocator enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:126,160,017...126,226,222
Ensembl chr 1:129,809,431...129,875,629 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:59,376,993...59,573,925 JBrowse link
G ARX aristaless related homeobox enables IEA Ensembl GO_REF:0000107 NCBI chr  X:17,598,858...17,612,544 JBrowse link
G ASCL1 achaete-scute family bHLH transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr12:100,536,895...100,539,737
Ensembl chr12:103,932,302...103,932,999 		JBrowse link
G ASCL2 achaete-scute family bHLH transcription factor 2 enables ISO (PMID:14561729) NTNU_SB PMID:14561729 NCBI chr11:2,305,497...2,308,080 JBrowse link
G ASCL5 achaete-scute family bHLH transcription factor 5 enables ISO (MGI:6359291|PMID:30426815)
(PMID:30426815)		 UniProt PMID:30426815 MGI:6359291 NCBI chr 1:176,713,717...176,726,991 JBrowse link
G ATF1 activating transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:37,930,383...37,988,476
Ensembl chr12:38,832,318...38,888,204 		JBrowse link
G ATF2 activating transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007 		JBrowse link
G ATF3 activating transcription factor 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:188,176,728...188,188,842
Ensembl chr 1:193,036,793...193,049,150 		JBrowse link
G ATF4 activating transcription factor 4 enables
contributes_to		 ISO (MGI:5572880|PMID:15788408)
(PMID:15788408)
(PMID:27812542)
(MGI:5292598|PMID:21768648), (PMID:12749859), (PMID:15724149), (PMID:27812542)		 NTNU_SB
MGI		 PMID:12749859 PMID:15724149 PMID:15788408 PMID:21768648 PMID:27812542 MGI:5292598 MGI:5572880 NCBI chr22:20,426,743...20,428,892
Ensembl chr22:38,248,094...38,249,249 		JBrowse link
G ATF6 activating transcription factor 6 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:137,178,629...137,382,256
Ensembl chr 1:140,977,750...141,176,725 		JBrowse link
G ATF6B activating transcription factor 6 beta contributes_to
enables		 ISO
IEA		 (PMID:11256944) NTNU_SB
TreeGrafter
Ensembl		 PMID:11256944 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:31,762,161...31,775,136
Ensembl chr 6:32,643,124...32,655,617 		JBrowse link
G ATOH1 atonal bHLH transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:86,188,534...86,191,301
Ensembl chr 4:96,863,762...96,864,832 		JBrowse link
G BACH1 BTB domain and CNC homolog 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:15,738,343...16,036,760
Ensembl chr21:29,126,107...29,173,835 		JBrowse link
G BACH2 BTB domain and CNC homolog 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:87,806,188...88,175,840
Ensembl chr 6:91,083,533...91,160,552 		JBrowse link
G BATF basic leucine zipper ATF-like transcription factor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:56,075,768...56,100,749
Ensembl chr14:74,919,115...74,943,652 		JBrowse link
G BATF2 basic leucine zipper ATF-like transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr11:60,344,306...60,353,448
Ensembl chr11:63,685,121...63,694,280 		JBrowse link
G BATF3 basic leucine zipper ATF-like transcription factor 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:188,256,087...188,271,196
Ensembl chr 1:193,116,694...193,131,228 		JBrowse link
G BCL11A BCL11 transcription factor A enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:60,552,908...60,655,437
Ensembl chr2A:61,695,613...61,795,800 		JBrowse link
G BCL11B BCL11 transcription factor B enables ISO (PMID:16809611) MGI PMID:16809611 NCBI chr14:79,795,262...79,898,472 JBrowse link
G BCL6 BCL6 transcription repressor enables IEA Ensembl GO_REF:0000107 NCBI chr 3:184,748,135...184,772,375
Ensembl chr 3:193,308,296...193,332,124 		JBrowse link
G BCL6B BCL6B transcription repressor enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:7,053,841...7,061,523
Ensembl chr17:7,042,775...7,046,741 		JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:4,927,487...4,933,215
Ensembl chr 3:5,028,515...5,032,470 		JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:60,194,758...60,199,344 JBrowse link
G BMAL1 basic helix-loop-helix ARNT like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr11:13,436,580...13,547,135
Ensembl chr11:13,163,028...13,240,376 		JBrowse link
G BMAL2 basic helix-loop-helix ARNT like 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:58,885,410...58,977,832
Ensembl chr12:61,503,973...61,596,580 		JBrowse link
G BPTF bromodomain PHD finger transcription factor enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:61,759,241...61,917,343
Ensembl chr17:66,956,594...67,109,428 		JBrowse link
G BSX brain specific homeobox enables ISO (MGI:3713592|PMID:17353277) NTNU_SB PMID:17353277 MGI:3713592 NCBI chr11:117,807,856...117,815,571
Ensembl chr11:121,731,049...121,735,101 		JBrowse link
G CALCOCO1 calcium binding and coiled-coil domain 1 enables IEA Ensembl GO_REF:0000107 NCBI chr12:35,027,491...35,044,039
Ensembl chr12:35,814,629...35,831,191 		JBrowse link
G CARF calcium responsive transcription factor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:90,145,504...90,224,042
Ensembl chr2B:208,291,742...208,367,028 		JBrowse link
G CC2D1A coiled-coil and C2 domain containing 1A enables ISO (PMID:12917378)
(PMID:21155902)		 GO_Central
MGI		 PMID:12917378 PMID:21155902 NCBI chr19:13,468,650...13,493,308 JBrowse link
G CC2D1B coiled-coil and C2 domain containing 1B enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:51,608,126...51,623,748
Ensembl chr 1:53,218,432...53,231,795 		JBrowse link
G CCAR1 cell division cycle and apoptosis regulator 1 enables IEA Ensembl GO_REF:0000107 NCBI chr10:65,193,942...65,267,857
Ensembl chr10:67,732,584...67,801,530 		JBrowse link
G CDK9 cyclin dependent kinase 9 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:98,905,468...98,909,923
Ensembl chr 9:127,580,862...127,584,935 		JBrowse link
G CDX1 caudal type homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:145,591,186...145,608,976
Ensembl chr 5:151,592,139...151,614,257 		JBrowse link
G CDX2 caudal type homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chr13:9,241,856...9,250,297
Ensembl chr13:27,586,340...27,593,632 		JBrowse link
G CDX4 caudal type homeobox 4 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:62,674,244...62,681,944
Ensembl chr  X:72,796,634...72,804,717 		JBrowse link
G CEBPA CCAAT enhancer binding protein alpha enables IEA TreeGrafter GO_REF:0000118 NCBI chr19:30,223,567...30,226,204 JBrowse link
G CEBPB CCAAT enhancer binding protein beta enables
contributes_to		 ISO PMID:8572170
(PMID:27812542)		 NTNU_SB
MGI		 PMID:8572170 PMID:27812542 RGD:8661634 NCBI chr20:46,533,163...46,535,282 JBrowse link
G CEBPD CCAAT enhancer binding protein delta enables ISO PMID:8572170
(MGI:5572879|PMID:15833715)		 NTNU_SB PMID:8572170 PMID:15833715 MGI:5572879 RGD:8661634 NCBI chr 8:44,167,256...44,168,545 JBrowse link
G CEBPE CCAAT enhancer binding protein epsilon enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:3,937,200...3,939,112
Ensembl chr14:22,033,654...22,035,219 		JBrowse link
G CEBPG CCAAT enhancer binding protein gamma enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:30,295,603...30,304,984
Ensembl chr19:39,046,219...39,046,671 		JBrowse link
G CHD2 chromodomain helicase DNA binding protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr15:71,568,560...71,713,330
Ensembl chr15:90,781,169...90,903,569 		JBrowse link
G CHD7 chromodomain helicase DNA binding protein 7 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:57,091,002...57,282,471
Ensembl chr 8:58,816,840...58,945,186 		JBrowse link
G CIART circadian associated repressor of transcription enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:125,627,812...125,632,367
Ensembl chr 1:129,278,742...129,283,271 		JBrowse link
G CLOCK clock circadian regulator enables IEA Ensembl GO_REF:0000107 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr2B:94,762,796...94,836,304
Ensembl chr2B:212,891,261...212,958,130 		JBrowse link
G CREB3 cAMP responsive element binding protein 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:35,583,351...35,587,870
Ensembl chr 9:36,385,867...36,390,540 		JBrowse link
G CREB3L2 cAMP responsive element binding protein 3 like 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:129,833,446...129,960,145
Ensembl chr 7:142,331,759...142,452,438 		JBrowse link
G CREB3L3 cAMP responsive element binding protein 3 like 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr19:3,176,863...3,194,294
Ensembl chr19:4,127,597...4,144,300 		JBrowse link
G CREB3L4 cAMP responsive element binding protein 3 like 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:129,324,479...129,331,204
Ensembl chr 1:132,953,062...132,959,696 		JBrowse link
G CREM cAMP responsive element modulator enables IEA TreeGrafter GO_REF:0000118 NCBI chr10:35,247,426...35,335,545
Ensembl chr10:35,825,218...35,912,432 		JBrowse link
G CRX cone-rod homeobox enables IEA TreeGrafter GO_REF:0000118 NCBI chr19:44,828,119...44,856,284 JBrowse link
G CTCF CCCTC-binding factor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:47,906,503...47,983,271
Ensembl chr16:67,302,952...67,372,041 		JBrowse link
G CTCFL CCCTC-binding factor like enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:53,836,295...53,865,974
Ensembl chr20:55,114,405...55,143,717 		JBrowse link
G CUX1 cut like homeobox 1 enables ISO (PMID:18836447) MGI PMID:18836447 NCBI chr 7:93,954,599...94,432,697
Ensembl chr 7:107,191,124...107,609,940 		JBrowse link
G CUX2 cut like homeobox 2 enables IEA Ensembl GO_REF:0000107 NCBI chr12:108,600,286...108,975,588
Ensembl chr12:112,175,555...112,311,221 		JBrowse link
G DACH1 dachshund family transcription factor 1 enables ISO (PMID:20956529) BHF-UCL PMID:20956529 NCBI chr13:52,666,569...53,098,257 JBrowse link
G DDIT3 DNA damage inducible transcript 3 enables ISO (PMID:22065586) NTNU_SB PMID:22065586 NCBI chr12:31,406,332...31,410,293
Ensembl chr12:31,664,743...31,668,701 		JBrowse link
G DDN dendrin enables ISO PMID:21911934 MGI PMID:21911934 RGD:8554331 NCBI chr12:39,751,507...39,755,731
Ensembl chr12:40,631,238...40,633,787 		JBrowse link
G DHX36 DEAH-box helicase 36 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871 		JBrowse link
G DHX9 DExH-box helicase 9 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:158,355,472...158,404,178
Ensembl chr 1:162,006,822...162,055,833 		JBrowse link
G DLX1 distal-less homeobox 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr2B:59,382,156...59,387,100
Ensembl chr2B:176,839,721...176,843,909 		JBrowse link
G DLX2 distal-less homeobox 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr2B:59,396,841...59,400,297
Ensembl chr2B:176,853,913...176,857,079 		JBrowse link
G DLX3 distal-less homeobox 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:44,076,437...44,081,690
Ensembl chr17:48,950,474...48,955,848 		JBrowse link
G DLX4 distal-less homeobox 4 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:44,055,326...44,061,687
Ensembl chr17:48,929,684...48,935,066 		JBrowse link
G DLX5 distal-less homeobox 5 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:88,972,066...88,977,588
Ensembl chr 7:102,555,267...102,561,186 		JBrowse link
G DLX6 distal-less homeobox 6 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:88,957,570...88,962,703 JBrowse link
G DMRT1 doublesex and mab-3 related transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 9:650,678...778,519
Ensembl chr 9:844,366...972,656 		JBrowse link
G DMRT2 doublesex and mab-3 related transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 9:860,271...867,704
Ensembl chr 9:1,055,473...1,060,962 		JBrowse link
G DMRTA1 DMRT like family A1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 9:22,280,250...22,289,180
Ensembl chr 9:22,895,891...22,900,745 		JBrowse link
G DMRTB1 DMRT like family B with proline rich C-terminal 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:52,731,659...52,739,731
Ensembl chr 1:54,329,966...54,337,823 		JBrowse link
G DMTF1 cyclin D binding myb like transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:79,135,090...79,178,980
Ensembl chr 7:92,792,934...92,836,607 		JBrowse link
G DNMT3A DNA methyltransferase 3 alpha enables IEA Ensembl GO_REF:0000107 NCBI chr2A:25,229,593...25,344,733
Ensembl chr2A:25,331,095...25,412,605 		JBrowse link
G DPRX divergent-paired related homeobox enables IEA TreeGrafter GO_REF:0000118 NCBI chr19:50,576,699...50,581,605
Ensembl chr19:59,423,417...59,428,237 		JBrowse link
G E2F1 E2F transcription factor 1 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr20:29,963,083...29,973,860
Ensembl chr20:31,103,764...31,110,604 		JBrowse link
G E2F2 E2F transcription factor 2 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 1:22,696,695...22,722,840
Ensembl chr 1:23,683,293...23,707,951 		JBrowse link
G E2F3 E2F transcription factor 3 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 6:20,225,471...20,317,199
Ensembl chr 6:20,574,898...20,665,785 		JBrowse link
G E2F4 E2F transcription factor 4 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr16:47,537,841...47,544,591 JBrowse link
G E2F5 E2F transcription factor 5 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 8:81,703,423...81,739,827
Ensembl chr 8:83,314,176...83,350,220 		JBrowse link
G E2F6 E2F transcription factor 6 enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr2A:11,429,887...11,452,080
Ensembl chr2A:11,577,950...11,599,732 		JBrowse link
G E2F7 E2F transcription factor 7 enables IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr12:74,540,049...74,582,561
Ensembl chr12:77,388,950...77,433,262 		JBrowse link
G E2F8 E2F transcription factor 8 enables IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr11:19,250,045...19,267,629
Ensembl chr11:19,162,837...19,179,744 		JBrowse link
G EBF1 EBF transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 5:154,091,337...154,492,474
Ensembl chr 5:160,708,235...161,108,568 		JBrowse link
G EBF2 EBF transcription factor 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:25,119,782...25,325,305
Ensembl chr 8:22,027,573...22,231,421
Ensembl chr 8:22,027,573...22,231,421 		JBrowse link
G EBF3 EBF transcription factor 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:126,432,326...126,561,328 JBrowse link
G EBF4 EBF family member 4 enables ISO (PMID:35939714) UniProt PMID:35939714 NCBI chr20:2,800,909...2,868,157 JBrowse link
G EEF1D eukaryotic translation elongation factor 1 delta enables ISO (PMID:21597468) UniProt PMID:21597468 NCBI chr 8:140,333,100...140,350,955
Ensembl chr 8:143,340,928...143,362,971 		JBrowse link
G EGR1 early growth response 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260 		JBrowse link
G EGR2 early growth response 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:59,320,073...59,326,869
Ensembl chr10:61,648,364...61,652,846 		JBrowse link
G EGR3 early growth response 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 8:21,937,516...21,943,646
Ensembl chr 8:18,877,396...18,882,874 		JBrowse link
G EGR4 early growth response 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chr2A:73,343,705...73,346,476
Ensembl chr2A:74,831,326...74,834,246 		JBrowse link
G EHF ETS homologous factor enables ISO (PMID:17027647) NTNU_SB PMID:17027647 NCBI chr11:34,607,242...34,638,019
Ensembl chr11:34,472,200...34,514,264 		JBrowse link
G ELF1 E74 like ETS transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr13:22,136,952...22,263,523
Ensembl chr13:40,726,930...40,774,734 		JBrowse link
G ELF3 E74 like ETS transcription factor 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:177,607,265...177,613,234
Ensembl chr 1:181,908,747...181,915,354 		JBrowse link
G ELF4 E74 like ETS transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:119,191,921...119,237,548
Ensembl chr  X:129,486,097...129,531,764 		JBrowse link
G ELK1 ETS transcription factor ELK1 enables ISO
IEA		 RGD
Ensembl		 PMID:11557580 GO_REF:0000107 RGD:628487 NCBI chr  X:40,071,433...40,086,518
Ensembl chr  X:47,967,492...47,982,579 		JBrowse link
G ELK3 ETS transcription factor ELK3 enables IEA Ensembl GO_REF:0000107 NCBI chr12:93,781,034...93,863,042
Ensembl chr12:97,223,198...97,276,120 		JBrowse link
G ELK4 ETS transcription factor ELK4 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:181,216,587...181,242,023
Ensembl chr 1:185,509,937...185,518,452 		JBrowse link
G EMX2 empty spiracles homeobox 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr10:114,124,759...114,132,109
Ensembl chr10:117,551,451...117,557,972 		JBrowse link
G EN1 engrailed homeobox 1 enables ISO (PMID:21672318) NTNU_SB PMID:21672318 NCBI chr2B:5,798,557...5,804,368 JBrowse link
G EOMES eomesodermin enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 3:27,601,829...27,608,701
Ensembl chr 3:27,925,086...27,930,274 		JBrowse link
G EP300 E1A binding protein p300 ISO RGD PMID:20702579 RGD:5128544 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G EPAS1 endothelial PAS domain protein 1 enables IEA Ensembl GO_REF:0000107 NCBI chr2A:46,403,411...46,492,734
Ensembl chr2A:47,332,308...47,421,560 		JBrowse link
G ERG ETS transcription factor ERG enables IEA Ensembl GO_REF:0000107 NCBI chr21:24,737,829...25,016,378
Ensembl chr21:38,087,339...38,281,403 		JBrowse link
G ESR1 estrogen receptor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:149,507,599...149,918,523
Ensembl chr 6:154,317,002...154,631,551 		JBrowse link
G ESR2 estrogen receptor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303 		JBrowse link
G ESRRA estrogen related receptor alpha enables ISO (PMID:18234909) MGI PMID:18234909 NCBI chr11:59,662,565...59,673,789
Ensembl chr11:63,009,295...63,018,744 		JBrowse link
G ESRRB estrogen related receptor beta enables ISO (MGI:3813404|PMID:18662995)
(PMID:27723719)
(PMID:18662995)
(MGI:5823092|PMID:27723719)		 BHF-UCL
UniProt		 PMID:18662995 PMID:27723719 MGI:3813404 MGI:5823092 NCBI chr14:56,868,361...57,060,552
Ensembl chr14:75,839,333...76,266,895 		JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr11:123,272,111...123,400,413
Ensembl chr11:127,174,721...127,288,673 		JBrowse link
G ETS2 ETS proto-oncogene 2, transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr21:25,158,457...25,178,035
Ensembl chr21:38,512,835...38,527,651 		JBrowse link
G ETV1 ETS variant transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 7:14,569,239...14,665,713
Ensembl chr 7:13,909,487...14,004,808 		JBrowse link
G ETV2 ETS variant transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr19:32,571,829...32,575,083
Ensembl chr19:41,307,864...41,311,004 		JBrowse link
G ETV4 ETS variant transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chr17:13,850,823...13,869,347
Ensembl chr17:14,099,160...14,116,186 		JBrowse link
G ETV6 ETS variant transcription factor 6 enables IEA Ensembl GO_REF:0000107 NCBI chr12:11,675,955...11,920,913
Ensembl chr12:11,844,939...12,179,537 		JBrowse link
G EVX1 even-skipped homeobox 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:27,887,145...27,892,267
Ensembl chr 7:27,486,329...27,491,245 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit enables IEA Ensembl GO_REF:0000107 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726 		JBrowse link
G FEV FEV transcription factor, ETS family member enables ISO PMID:9468386 NTNU_SB PMID:9468386 RGD:633697 NCBI chr2B:106,238,933...106,243,499 JBrowse link
G FEZF1 FEZ family zinc finger 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:114,311,563...114,322,490
Ensembl chr 7:126,995,708...127,005,732 		JBrowse link
G FEZF2 FEZ family zinc finger 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 3:62,292,878...62,296,987
Ensembl chr 3:63,680,307...63,683,052 		JBrowse link
G FIGLA folliculogenesis specific bHLH transcription factor enables ISO (MGI:1326792|PMID:9362457) NTNU_SB PMID:9362457 MGI:1326792 NCBI chr2A:70,840,305...70,853,542
Ensembl chr2A:71,954,124...71,967,339 		JBrowse link
G FKTN fukutin enables IEA TreeGrafter GO_REF:0000118 NCBI chr 9:76,723,071...76,821,611
Ensembl chr 9:104,849,496...104,925,422 		JBrowse link
G FLI1 Fli-1 proto-oncogene, ETS transcription factor enables IEA Ensembl GO_REF:0000107 NCBI chr11:123,506,859...123,626,024
Ensembl chr11:127,409,301...127,530,312 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766 		JBrowse link
G FOSB FosB proto-oncogene, AP-1 transcription factor subunit enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:42,416,781...42,424,003
Ensembl chr19:51,013,350...51,020,570 		JBrowse link
G FOSL1 FOS like 1, AP-1 transcription factor subunit enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:61,252,513...61,261,032
Ensembl chr11:64,581,841...64,589,304 		JBrowse link
G FOSL2 FOS like 2, AP-1 transcription factor subunit enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:28,392,328...28,416,838
Ensembl chr2A:28,485,613...28,498,397 		JBrowse link
G FOXA1 forkhead box A1 enables ISO (PMID:25802280)
(PMID:10049364)		 BHF-UCL
MGI		 PMID:10049364 PMID:25802280 NCBI chr14:18,347,284...18,352,705 JBrowse link
G FOXA2 forkhead box A2 enables ISO (PMID:12642491)
(PMID:12488434), (PMID:15485926), (PMID:15987774), (PMID:16912278)
PMID:20735474		 BHF-UCL
MGI		 PMID:12488434 PMID:12642491 PMID:15485926 PMID:15987774 PMID:16912278 More... RGD:8553707 NCBI chr20:22,519,942...22,524,262 JBrowse link
G FOXA3 forkhead box A3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr19:42,873,933...42,883,479
Ensembl chr19:51,410,473...51,418,744 		JBrowse link
G FOXB1 forkhead box B1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr15:38,979,727...38,983,040
Ensembl chr15:57,284,077...57,285,054 		JBrowse link
G FOXC1 forkhead box C1 enables ISO (MGI:5641778|PMID:25808752) GO_Central PMID:25808752 MGI:5641778 NCBI chr 6:1,429,051...1,433,180 JBrowse link
G FOXC2 forkhead box C2 enables ISO (PMID:20956529) BHF-UCL PMID:20956529 NCBI chr16:67,237,476...67,239,545 JBrowse link
G FOXD1 forkhead box D1 enables ISO (MGI:2675756|PMID:13678594) NTNU_SB PMID:13678594 MGI:2675756 NCBI chr 5:41,867,118...41,870,497 JBrowse link
G FOXF1 forkhead box F1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:67,183,416...67,188,211
Ensembl chr16:86,516,119...86,519,949 		JBrowse link
G FOXI1 forkhead box I1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:165,468,600...165,473,088
Ensembl chr 5:172,228,840...172,232,692 		JBrowse link
G FOXI2 forkhead box I2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr10:124,325,031...124,327,965
Ensembl chr10:128,574,023...128,576,782 		JBrowse link
G FOXI3 forkhead box I3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr2A:87,578,732...87,585,111 JBrowse link
G FOXJ1 forkhead box J1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:70,084,920...70,089,865
Ensembl chr17:75,638,634...75,641,666 		JBrowse link
G FOXJ2 forkhead box J2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:8,152,037...8,175,291
Ensembl chr12:8,194,519...8,217,778 		JBrowse link
G FOXJ3 forkhead box J3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:41,475,482...41,637,478
Ensembl chr 1:42,855,058...42,992,584 		JBrowse link
G FOXK1 forkhead box K1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:4,934,773...5,017,127
Ensembl chr 7:4,975,444...5,056,174 		JBrowse link
G FOXK2 forkhead box K2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:76,930,135...77,018,294 JBrowse link
G FOXL2 forkhead box L2 enables ISO (MGI:2675699|PMID:12943993)
(PMID:12943993)		 NTNU_SB PMID:12943993 MGI:2675699 NCBI chr 3:135,968,040...135,980,063 JBrowse link
G FOXO1 forkhead box O1 enables ISO (MGI:3697295|PMID:17090532) GO_Central PMID:17090532 MGI:3697295 NCBI chr13:21,763,729...21,874,279 JBrowse link
G FOXO3 forkhead box O3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:106,360,519...106,485,676
Ensembl chr 6:110,406,266...110,516,272 		JBrowse link
G FOXO4 forkhead box O4 enables IEA TreeGrafter GO_REF:0000118 NCBI chr  X:60,364,466...60,372,147
Ensembl chr  X:70,422,504...70,429,971 		JBrowse link
G FOXP1 forkhead box P1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173 		JBrowse link
G FOXP2 forkhead box P2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:106,040,118...106,648,741
Ensembl chr 7:119,077,332...119,343,893 		JBrowse link
G FOXP3 forkhead box P3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029 		JBrowse link
G FOXP4 forkhead box P4 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 6:41,133,751...41,189,709
Ensembl chr 6:42,459,420...42,496,205 		JBrowse link
G FOXQ1 forkhead box Q1 enables ISO (MGI:1891579|PMID:10896677) NTNU_SB PMID:10896677 MGI:1891579 NCBI chr 6:1,134,672...1,137,323 JBrowse link
G FOXS1 forkhead box S1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:28,137,881...28,140,107
Ensembl chr20:29,268,362...29,269,354 		JBrowse link
G FUBP1 far upstream element binding protein 1 enables ISO (PMID:18836447) MGI PMID:18836447 NCBI chr 1:77,162,675...77,198,486 JBrowse link
G GABPA GA binding protein transcription factor subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chr21:12,179,921...12,217,851
Ensembl chr21:25,536,750...25,574,871 		JBrowse link
G GATA1 GATA binding protein 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:41,088,724...41,092,190
Ensembl chr  X:48,945,394...48,953,126 		JBrowse link
G GATA2 GATA binding protein 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
G GATA3 GATA binding protein 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
G GATA4 GATA binding protein 4 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:7,442,921...7,526,731 JBrowse link
G GATA5 GATA binding protein 5 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr20:60,148,359...60,158,886 JBrowse link
G GATA6 GATA binding protein 6 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr18:15,411,764...15,444,402 JBrowse link
G GCM1 glial cells missing transcription factor 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:52,681,528...52,703,367
Ensembl chr 6:54,319,744...54,341,582 		JBrowse link
G GCM2 glial cells missing transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 6:10,712,428...10,722,056
Ensembl chr 6:10,990,928...10,999,554 		JBrowse link
G GFI1 growth factor independent 1 transcriptional repressor enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:95,139,171...95,151,054
Ensembl chr 1:93,876,245...93,883,528 		JBrowse link
G GFI1B growth factor independent 1B transcriptional repressor enables IEA TreeGrafter GO_REF:0000118 NCBI chr 9:104,061,236...104,113,208
Ensembl chr 9:132,692,343...132,742,326 		JBrowse link
G GLI1 GLI family zinc finger 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:31,453,759...31,466,194
Ensembl chr12:31,710,057...31,722,473 		JBrowse link
G GLI2 GLI family zinc finger 2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:7,665,403...7,922,840
Ensembl chr2B:121,303,831...121,497,442 		JBrowse link
G GLI3 GLI family zinc finger 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:42,004,965...42,280,772
Ensembl chr 7:42,056,565...42,322,865 		JBrowse link
G GLIS1 GLIS family zinc finger 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:52,778,438...53,015,050
Ensembl chr 1:54,376,866...54,610,255 		JBrowse link
G GLIS2 GLIS family zinc finger 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr16:3,234,549...3,257,994
Ensembl chr16:4,418,524...4,425,631 		JBrowse link
G GLIS3 GLIS family zinc finger 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 9:3,633,416...4,125,420
Ensembl chr 9:3,827,712...4,300,658 		JBrowse link
G GMEB1 glucocorticoid modulatory element binding protein 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:27,939,361...27,989,691
Ensembl chr 1:28,985,464...29,019,225 		JBrowse link
G GMEB2 glucocorticoid modulatory element binding protein 2 enables IEA TreeGrafter GO_REF:0000118 Ensembl chr20:61,513,870...61,544,993 JBrowse link
G GRHL1 grainyhead like transcription factor 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr2A:9,944,385...9,994,510
Ensembl chr2A:10,105,486...10,155,177 		JBrowse link
G GRHL2 grainyhead like transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 8:98,129,147...98,308,120
Ensembl chr 8:100,308,575...100,471,830 		JBrowse link
G GRHL3 grainyhead like transcription factor 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:23,519,911...23,558,105
Ensembl chr 1:24,502,294...24,547,152 		JBrowse link
G GSC goosecoid homeobox enables IEA TreeGrafter GO_REF:0000118 NCBI chr14:75,390,119...75,392,050
Ensembl chr14:94,718,269...94,720,404 		JBrowse link
G GSX1 GS homeobox 1 enables IEA Ensembl GO_REF:0000107 NCBI chr13:9,082,674...9,085,014
Ensembl chr13:27,427,569...27,428,876 		JBrowse link
G GTF2IRD1 GTF2I repeat domain containing 1 enables IEA Ensembl GO_REF:0000107 Ensembl chr 7:81,653,515...81,748,951 JBrowse link
G GZF1 GDNF inducible zinc finger protein 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr20:23,302,958...23,316,469
Ensembl chr20:23,655,293...23,665,989 		JBrowse link
G HAND1 heart and neural crest derivatives expressed 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 5:149,876,970...149,880,269
Ensembl chr 5:155,875,935...155,878,166 		JBrowse link
G HBP1 HMG-box transcription factor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:99,147,813...99,181,335
Ensembl chr 7:111,873,874...111,906,437 		JBrowse link
G HCFC1 host cell factor C1 enables ISO (PMID:18836447) MGI PMID:18836447 NCBI chr  X:143,502,159...143,526,418
Ensembl chr  X:153,389,859...153,412,999 		JBrowse link
G HDAC1 histone deacetylase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410 		JBrowse link
G HDAC2 histone deacetylase 2 enables ISO (MGI:5817507|PMID:28053041), (PMID:24137001) MGI PMID:24137001 PMID:28053041 MGI:5817507 NCBI chr 6:111,731,139...111,761,826
Ensembl chr 6:115,802,367...115,833,004 		JBrowse link
G HDAC4 histone deacetylase 4 enables ISO (PMID:24413532) UniProt PMID:24413532 NCBI chr2B:126,287,745...126,649,815
Ensembl chr2B:245,123,061...245,427,054 		JBrowse link
G HDAC5 histone deacetylase 5 enables IEA Ensembl GO_REF:0000107 NCBI chr17:13,273,052...13,319,695
Ensembl chr17:13,446,836...13,479,140 		JBrowse link
G HDAC6 histone deacetylase 6 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:41,099,539...41,122,650
Ensembl chr  X:48,960,430...48,982,642 		JBrowse link
G HDGF heparin binding growth factor enables ISO PMID:19162039 NTNU_SB PMID:19162039 RGD:8554761 NCBI chr 1:132,085,446...132,110,214
Ensembl chr 1:135,907,119...135,917,607 		JBrowse link
G HDX highly divergent homeobox enables IEA TreeGrafter GO_REF:0000118 NCBI chr  X:73,390,936...73,574,197
Ensembl chr  X:83,502,644...83,658,576 		JBrowse link
G HELT helt bHLH transcription factor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:177,183,619...177,186,099
Ensembl chr 4:189,405,042...189,406,886 		JBrowse link
G HES2 hes family bHLH transcription factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:5,175,124...5,179,785
Ensembl chr 1:6,429,281...6,435,896 		JBrowse link
G HES3 hes family bHLH transcription factor 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:5,008,155...5,012,868
Ensembl chr 1:6,265,738...6,266,937 		JBrowse link
G HESX1 HESX homeobox 1 enables ISS
IEA		 UniProt
TreeGrafter
Ensembl		 GO_REF:0000024 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:57,131,419...57,161,205
Ensembl chr 3:58,341,965...58,370,347 		JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 8:76,286,433...76,290,507
Ensembl chr 8:77,913,761...77,921,201 		JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 6:123,527,180...123,538,794
Ensembl chr 6:127,647,547...127,659,056 		JBrowse link
G HEYL hes related family bHLH transcription factor with YRPW motif like enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:38,913,549...38,929,798
Ensembl chr 1:40,240,118...40,256,933 		JBrowse link
G HHEX hematopoietically expressed homeobox enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:89,433,402...89,439,137
Ensembl chr10:92,947,373...92,952,992 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885 		JBrowse link
G HIF3A hypoxia inducible factor 3 subunit alpha enables IEA Ensembl GO_REF:0000107 NCBI chr19:43,243,290...43,326,146
Ensembl chr19:51,815,809...51,862,039 		JBrowse link
G HINFP histone H4 transcription factor enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:113,959,670...113,973,781
Ensembl chr11:117,888,855...117,902,184 		JBrowse link
G HIVEP1 HIVEP zinc finger 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:11,847,552...12,003,710
Ensembl chr 6:12,286,017...12,363,803 		JBrowse link
G HIVEP2 HIVEP zinc finger 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 6:140,518,954...140,712,849
Ensembl chr 6:145,240,914...145,328,850 		JBrowse link
G HIVEP3 HIVEP zinc finger 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:40,805,355...41,335,290
Ensembl chr 1:42,120,741...42,203,313 		JBrowse link
G HLF HLF transcription factor, PAR bZIP family member enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:49,353,790...49,413,676
Ensembl chr17:54,218,399...54,278,044 		JBrowse link
G HMGA1 high mobility group AT-hook 1 enables ISO (MGI:5644022|PMID:19389484), (PMID:22207709)
(PMID:19389484), (PMID:22207709)		 MGI
ARUK-UCL		 PMID:19389484 PMID:22207709 MGI:5644022 NCBI chr 6:33,807,171...33,816,603 JBrowse link
G HNF1A HNF1 homeobox A enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:118,562,308...118,584,596
Ensembl chr12:121,932,671...121,955,911 		JBrowse link
G HNF1B HNF1 homeobox B enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha enables IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr20:40,684,450...40,763,824
Ensembl chr20:41,779,034...41,856,536 		JBrowse link
G HNF4G hepatocyte nuclear factor 4 gamma enables IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chr 8:71,947,924...72,102,934
Ensembl chr 8:73,716,604...73,743,865 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:220,450,218...220,461,412
Ensembl chr 1:225,817,899...225,842,031 		JBrowse link
G HOXA1 homeobox A1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:27,737,432...27,740,442
Ensembl chr 7:27,335,710...27,339,747 		JBrowse link
G HOXA10 homeobox A10 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:27,815,112...27,818,829
Ensembl chr 7:27,415,833...27,423,580 		JBrowse link
G HOXA11 homeobox A11 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:27,826,003...27,829,757
Ensembl chr 7:27,424,759...27,429,103 		JBrowse link
G HOXA13 homeobox A13 enables ISO (MGI:5572825|PMID:15342482)
(PMID:15342482)		 NTNU_SB PMID:15342482 MGI:5572825 NCBI chr 7:27,838,656...27,844,562 JBrowse link
G HOXA2 homeobox A2 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:27,745,138...27,747,129
Ensembl chr 7:27,344,469...27,346,789 		JBrowse link
G HOXA3 homeobox A3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:27,750,642...27,767,125
Ensembl chr 7:27,350,491...27,371,169 		JBrowse link
G HOXA4 homeobox A4 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:27,773,001...27,775,284 JBrowse link
G HOXA5 homeobox A5 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:27,786,040...27,789,339
Ensembl chr 7:27,385,175...27,388,990 		JBrowse link
G HOXA6 homeobox A6 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:27,790,031...27,792,348
Ensembl chr 7:27,389,679...27,391,997 		JBrowse link
G HOXA7 homeobox A7 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:27,799,317...27,802,492
Ensembl chr 7:27,396,898...27,402,142 		JBrowse link
G HOXA9 homeobox A9 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:27,806,942...27,810,304
Ensembl chr 7:27,405,931...27,409,984 		JBrowse link
G HOXB1 homeobox B1 enables
contributes_to		 IEA
ISO		 (PMID:9242495) Ensembl
TreeGrafter
MGI		 PMID:9242495 GO_REF:0000107 GO_REF:0000118 NCBI chr17:9,005,745...9,008,230
Ensembl chr17:9,190,137...9,191,696 		JBrowse link
G HOXB13 homeobox B13 enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:8,807,988...8,810,362
Ensembl chr17:8,994,224...8,996,598 		JBrowse link
G HOXB2 homeobox B2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:8,991,652...8,994,092
Ensembl chr17:9,176,313...9,178,713 		JBrowse link
G HOXB3 homeobox B3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:8,946,441...8,987,876
Ensembl chr17:9,147,784...9,171,021 		JBrowse link
G HOXB4 homeobox B4 enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:8,958,253...8,961,261
Ensembl chr17:9,143,173...9,146,161 		JBrowse link
G HOXB5 homeobox B5 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:8,941,990...8,945,512
Ensembl chr17:9,127,630...9,130,616 		JBrowse link
G HOXB6 homeobox B6 enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:8,931,773...8,941,024
Ensembl chr17:9,116,886...9,126,150 		JBrowse link
G HOXB7 homeobox B7 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:8,925,717...8,929,523
Ensembl chr17:9,110,864...9,114,639 		JBrowse link
G HOXB9 homeobox B9 enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:8,910,421...8,916,128
Ensembl chr17:9,095,438...9,100,747 		JBrowse link
G HOXC10 homeobox C10 enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:34,764,956...34,770,088
Ensembl chr12:35,553,262...35,558,393 		JBrowse link
G HOXC11 homeobox C11 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:34,777,790...34,782,104
Ensembl chr12:35,567,093...35,570,396 		JBrowse link
G HOXC13 homeobox C13 enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:34,808,575...34,816,324
Ensembl chr12:35,596,821...35,604,560 		JBrowse link
G HOXC4 homeobox C4 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:34,699,357...34,702,368
Ensembl chr12:35,487,619...35,526,627 		JBrowse link
G HOXC5 homeobox C5 enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:34,720,006...34,722,202
Ensembl chr12:35,508,711...35,510,388 		JBrowse link
G HOXC6 homeobox C6 enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:34,724,503...34,739,436
Ensembl chr12:35,512,686...35,526,627 		JBrowse link
G HOXC9 homeobox C9 enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:34,751,922...34,755,157
Ensembl chr12:35,540,234...35,543,486 		JBrowse link
G HOXD10 homeobox D10 enables IEA TreeGrafter GO_REF:0000118 NCBI chr2B:63,395,636...63,399,704
Ensembl chr2B:181,104,876...181,110,963 		JBrowse link
G HOXD13 homeobox D13 enables ISO (MGI:3620476|PMID:16314414)
(PMID:16314414)		 NTNU_SB PMID:16314414 MGI:3620476 NCBI chr2B:63,372,517...63,375,731 JBrowse link
G HOXD3 homeobox D3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr2B:63,432,720...63,452,816
Ensembl chr2B:181,141,538...181,161,604 		JBrowse link
G HOXD4 homeobox D4 enables IEA TreeGrafter GO_REF:0000118 NCBI chr2B:63,429,084...63,432,972
Ensembl chr2B:181,140,175...181,141,484 		JBrowse link
G HOXD9 homeobox D9 enables IEA TreeGrafter GO_REF:0000118 NCBI chr2B:63,401,813...63,404,731
Ensembl chr2B:181,112,002...181,113,415 		JBrowse link
G HSF1 heat shock transcription factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 8:141,055,310...141,078,360
Ensembl chr 8:144,062,137...144,067,866 		JBrowse link
G HSF2 heat shock transcription factor 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:120,187,898...120,221,391
Ensembl chr 6:124,312,353...124,348,628 		JBrowse link
G HSF4 heat shock transcription factor 4 enables IEA Ensembl GO_REF:0000107 NCBI chr16:47,509,458...47,516,060
Ensembl chr16:66,897,868...66,904,179 		JBrowse link
G IKZF1 IKAROS family zinc finger 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:50,946,817...51,047,168
Ensembl chr 7:51,191,685...51,291,245 		JBrowse link
G IKZF2 IKAROS family zinc finger 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr2B:100,255,430...100,407,395
Ensembl chr2B:218,737,506...218,882,087 		JBrowse link
G IKZF3 IKAROS family zinc finger 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr17:17,459,438...17,498,452
Ensembl chr17:17,643,750...17,741,479 		JBrowse link
G IKZF4 IKAROS family zinc finger 4 enables IEA TreeGrafter GO_REF:0000118 NCBI chr12:32,874,890...32,906,053
Ensembl chr12:33,124,994...33,155,269 		JBrowse link
G IKZF5 IKAROS family zinc finger 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chr10:119,547,766...119,565,804
Ensembl chr10:123,821,461...123,839,499 		JBrowse link
G INSM1 INSM transcriptional repressor 1 enables ISO (PMID:11842116), (PMID:16569215), (PMID:18417529) UniProt PMID:11842116 PMID:16569215 PMID:18417529 NCBI chr20:20,317,060...20,320,051 JBrowse link
G IRF1 interferon regulatory factor 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:127,903,887...127,913,843
Ensembl chr 5:134,067,441...134,075,035 		JBrowse link
G IRF2 interferon regulatory factor 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 4:176,554,979...176,641,827
Ensembl chr 4:188,779,134...188,865,764 		JBrowse link
G IRF3 interferon regulatory factor 3 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:46,674,193...46,680,464
Ensembl chr19:55,593,627...55,599,903 		JBrowse link
G IRF4 interferon regulatory factor 4 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:206,282...226,487
Ensembl chr 6:342,718...356,654 		JBrowse link
G IRF5 interferon regulatory factor 5 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:120,889,752...120,902,096
Ensembl chr 7:133,415,170...133,426,356 		JBrowse link
G IRF6 interferon regulatory factor 6 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 1:185,361,612...185,382,516
Ensembl chr 1:190,226,727...190,247,145 		JBrowse link
G IRF7 interferon regulatory factor 7 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr11:647,827...651,314 JBrowse link
G IRF8 interferon regulatory factor 8 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:66,568,370...66,591,949
Ensembl chr16:85,905,334...85,929,073 		JBrowse link
G IRF9 interferon regulatory factor 9 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:4,937,068...4,942,870
Ensembl chr14:23,061,990...23,067,824 		JBrowse link
G IRX1 iroquois homeobox 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 5:3,922,252...3,927,836
Ensembl chr 5:3,610,225...3,615,279 		JBrowse link