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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of mitochondrial RNA catabolic process
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Accession:GO:0000960 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving catabolism in the mitochondrion of RNA transcribed from the mitochondrial genome.



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negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrpprc leucine-rich pentatricopeptide repeat containing acts_upstream_of_or_within ISO MGI:1916394|MGI:3857306|MGI:5438913 (MGI:5301479|PMID:21880015), (MGI:5438202|PMID:22045337) RGD PMID:21880015 PMID:22045337 MGI:5301479 MGI:5438202 NCBI chr 6:9,859,867...9,942,294
Ensembl chr 6:9,859,867...9,942,293
JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1919666 (MGI:5438202|PMID:22045337)
RGD PMID:22045337 PMID:21873635 MGI:5438202, RGD:13792537 NCBI chr 6:107,088,760...107,097,791
Ensembl chr 6:107,088,403...107,097,791
JBrowse link
positive regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grsf1 G-rich RNA sequence binding factor 1 involved_in ISO (PMID:29967381) RGD PMID:29967381 NCBI chr14:19,412,944...19,429,364
Ensembl chr14:19,412,156...19,429,362
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:19509288), (PMID:29967381) RGD PMID:19509288 PMID:29967381 NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
JBrowse link
G Supv3l1 Suv3 like RNA helicase involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19509288), (PMID:19864255), (PMID:29967381)
Ensembl
UniProt
RGD
PMID:19509288 PMID:19864255 PMID:29967381 GO_REF:0000024 GO_REF:0000107 NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19391
    metabolic process 11735
      regulation of metabolic process 6740
        regulation of cellular metabolic process 5891
          regulation of cellular catabolic process 770
            regulation of mitochondrial RNA catabolic process 5
              negative regulation of mitochondrial RNA catabolic process + 2
              positive regulation of mitochondrial RNA catabolic process + 3
              regulation of mitochondrial mRNA catabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19391
    cellular process 18252
      cellular metabolic process 10655
        cellular aromatic compound metabolic process 5580
          nucleobase-containing compound metabolic process 5360
            nucleic acid metabolic process 4874
              RNA metabolic process 4346
                mitochondrial RNA metabolic process 47
                  mitochondrial RNA catabolic process 6
                    regulation of mitochondrial RNA catabolic process 5
                      negative regulation of mitochondrial RNA catabolic process + 2
                      positive regulation of mitochondrial RNA catabolic process + 3
                      regulation of mitochondrial mRNA catabolic process + 0
paths to the root