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ONTOLOGY REPORT - ANNOTATIONS

Term:outer kinetochore
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Accession:GO:0000940 term browser browse the term
Definition:The region of a kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions.
Synonyms:exact_synonym: condensed chromosome outer kinetochore;   condensed nuclear chromosome outer kinetochore;   outer kinetochore of condensed chromosome;   outer kinetochore of condensed nuclear chromosome
 narrow_synonym: outer kinetochore plate
 alt_id: GO:0000942


show annotations for term's descendants           Sort by:
outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bod1 biorientation of chromosomes in cell division 1 part_of ISO (PMID:17938248) RGD PMID:17938248 NCBI chr10:15,993,454...15,999,795
Ensembl chr10:15,993,454...15,999,787 		JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B part_of ISO (PMID:19468067)
(MGI:2682084|PMID:14519686), (MGI:3839184|PMID:19283064)		 RGD PMID:14519686 PMID:19283064 PMID:19468067 MGI:2682084 MGI:3839184 NCBI chr 3:105,563,089...105,615,547
Ensembl chr 3:105,563,138...105,615,547 		JBrowse link
G Ccnb1 cyclin B1 part_of ISO
IEA		 (PMID:18195732)
GO_REF:0000107		 RGD
Ensembl		 PMID:18195732 GO_REF:0000107 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172 		JBrowse link
G Cenpe centromere protein E part_of ISO (MGI:3839184|PMID:19283064) RGD PMID:19283064 MGI:3839184 NCBI chr 2:223,637,035...223,695,692
Ensembl chr 2:223,636,998...223,695,669 		JBrowse link
G Cenpf centromere protein F part_of ISO (PMID:7542657), (PMID:7642639), (PMID:7904902) RGD PMID:7542657 PMID:7642639 PMID:7904902 NCBI chr13:101,184,127...101,229,714
Ensembl chr13:101,184,127...101,229,669 		JBrowse link
G Crebbp CREB binding protein part_of ISO (MGI:2682084|PMID:14519686) RGD PMID:14519686 MGI:2682084 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888 		JBrowse link
G LOC102555739 uncharacterized LOC102555739 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:184,226,732...184,300,750
Ensembl chr 1:184,215,516...184,300,008 		JBrowse link
G LOC108352183 spindle and kinetochore-associated protein 2 pseudogene part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:67,932,790...67,950,325
Ensembl chr10:67,949,696...67,950,097 		JBrowse link
G Ndc80 NDC80 kinetochore complex component part_of ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 9:111,407,191...111,440,921
Ensembl chr 9:111,407,191...111,440,924 		JBrowse link
G Nup133 nucleoporin 133 colocalizes_with
part_of		 ISO
IEA		 (PMID:17363900)
GO_REF:0000107		 RGD
Ensembl		 PMID:17363900 GO_REF:0000107 NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239 		JBrowse link
G Plk1 polo-like kinase 1 part_of IEA
ISO		 GO_REF:0000107
(PMID:18195732)		 Ensembl
RGD		 PMID:18195732 GO_REF:0000107 NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400 		JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 part_of ISO
IEA
ISS
IBA		 (PMID:17093495), (PMID:19289083)
GO_REF:0000107
GO_REF:0000024
PMID:21873635		 RGD
Ensembl
UniProt		 PMID:17093495 PMID:19289083 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr18:67,794,722...67,805,037
Ensembl chr18:67,794,725...67,805,037 		JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 part_of ISS
ISO
IBA		 GO_REF:0000024
(PMID:17093495), (PMID:19289083)
PMID:21873635		 UniProt
RGD		 PMID:17093495 PMID:19289083 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:71,921,474...71,939,461
Ensembl chr10:71,921,582...71,939,458 		JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 part_of ISS
ISO
IBA
IEA		 GO_REF:0000024
(PMID:19289083)
PMID:21873635
GO_REF:0000002
GO_REF:0000107		 UniProt
RGD
InterPro
Ensembl		 PMID:19289083 PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr15:31,951,812...31,971,010
Ensembl chr15:31,951,825...31,971,010 		JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 part_of ISO
ISS
IBA		 (PMID:19468067)
GO_REF:0000024
PMID:21873635		 RGD
UniProt		 PMID:19468067 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:19,269,125...19,294,213
Ensembl chr10:19,269,127...19,294,127 		JBrowse link
Ndc80 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndc80 NDC80 kinetochore complex component part_of
located_in		 ISO
IBA		 (PMID:14699129)
(PMID:18455984)
PMID:21873635		 RGD PMID:14699129 PMID:18455984 PMID:21873635 RGD:13792537 NCBI chr 9:111,407,191...111,440,921
Ensembl chr 9:111,407,191...111,440,924 		JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex part_of
located_in		 ISO
ISS
IBA
IEA		 (PMID:14699129)
GO_REF:0000024
PMID:21873635
(PMID:18455984)
GO_REF:0000002		 RGD
UniProt
InterPro		 PMID:14699129 PMID:18455984 PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:13792537 NCBI chr13:81,693,675...81,722,765
Ensembl chr13:81,693,598...81,722,766 		JBrowse link
G Spc24 SPC24 component of NDC80 kinetochore complex part_of
located_in		 ISO
IBA		 (PMID:14699129)
(PMID:18455984)
PMID:21873635		 RGD PMID:14699129 PMID:18455984 PMID:21873635 RGD:13792537 NCBI chr 8:20,300,315...20,305,354
Ensembl chr 8:20,300,319...20,305,310 		JBrowse link
G Spc25 SPC25 component of NDC80 kinetochore complex part_of
located_in		 ISO
ISS
IBA		 (PMID:14699129)
GO_REF:0000024
(PMID:18455984)
PMID:21873635		 RGD
UniProt		 PMID:14699129 PMID:18455984 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:53,930,013...53,988,940
Ensembl chr 3:53,975,704...53,988,959 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20183
    protein-containing complex 6462
      outer kinetochore 18
        DASH complex 0
        Ndc80 complex 4
Path 2
Term Annotations click to browse term
  cellular_component 20183
    cellular anatomical entity 20022
      organelle 13374
        non-membrane-bounded organelle 5112
          intracellular non-membrane-bounded organelle 5111
            chromosome 1329
              chromosomal region 331
                chromosome, centromeric region 233
                  condensed chromosome, centromeric region 157
                    kinetochore 146
                      outer kinetochore 18
                        DASH complex 0
                        Ndc80 complex 4
paths to the root