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ONTOLOGY REPORT - ANNOTATIONS


Term:condensed chromosome outer kinetochore
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Accession:GO:0000940 term browser browse the term
Definition:The region of a condensed chromosome kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions.
Synonyms:exact_synonym: outer kinetochore of condensed chromosome
 narrow_synonym: outer kinetochore plate


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condensed chromosome outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bod1 biorientation of chromosomes in cell division 1 ISO
IBA
(PMID:17938248)
PMID:21873635
RGD PMID:17938248, PMID:21873635 RGD:13792537 NCBI chr10:16,259,728...16,266,069
Ensembl chr10:16,259,728...16,266,061
JBrowse link
G Bod1l1 biorientation of chromosomes in cell division 1-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:73,738,137...73,792,935
Ensembl chr14:73,738,137...73,791,656
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ISO (PMID:19468067)
(MGI:MGI:2682084|PMID:14519686), (MGI:MGI:3839184|PMID:19283064)
RGD PMID:14519686, PMID:19283064, PMID:19468067 MGI:MGI:2682084, MGI:MGI:3839184 NCBI chr 3:110,367,949...110,420,471
Ensembl chr 3:110,367,939...110,420,458
JBrowse link
G Cenpe centromere protein E ISO (MGI:MGI:3839184|PMID:19283064) RGD PMID:19283064 MGI:MGI:3839184 NCBI chr 2:240,395,974...240,454,785
Ensembl chr 2:240,396,152...240,454,747
JBrowse link
G Cenpf centromere protein F ISO (PMID:7542657), (PMID:7642639), (PMID:7904902) RGD PMID:7542657, PMID:7642639, PMID:7904902 NCBI chr13:108,132,499...108,178,609
Ensembl chr13:108,132,499...108,178,609
JBrowse link
G Crebbp CREB binding protein ISO (MGI:MGI:2682084|PMID:14519686) RGD PMID:14519686 MGI:MGI:2682084 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Nup133 nucleoporin 133 colocalizes_with ISO (PMID:17363900) RGD PMID:17363900 NCBI chr19:56,681,965...56,731,404
Ensembl chr19:56,681,979...56,731,372
JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:17093495), (PMID:19289083)
UniProt
RGD
PMID:17093495, PMID:19289083, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr18:70,174,316...70,184,368
Ensembl chr18:70,173,944...70,184,337
JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:17093495), (PMID:19289083)
UniProt
RGD
PMID:17093495, PMID:19289083, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:74,413,989...74,431,922
Ensembl chr10:74,413,989...74,431,922
JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 ISO
IBA
ISS
(PMID:19289083)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19289083, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:38,077,903...38,097,100
Ensembl chr15:38,077,909...38,096,875
JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 ISO
IBA
ISS
(PMID:19468067)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19468067, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:19,628,070...19,652,914
Ensembl chr10:19,628,258...19,652,898
JBrowse link
condensed nuclear chromosome outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase ISO (PMID:24055156) RGD PMID:24055156 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Ccnb1 cyclin B1 ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Plk1 polo-like kinase 1 ISO
IEA
(PMID:18195732)
GO_REF:0000107
RGD
Ensembl
PMID:18195732 GO_REF:0000107 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    protein-containing complex 6093
      condensed chromosome outer kinetochore 15
        condensed nuclear chromosome outer kinetochore + 4
Path 2
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      organelle 13258
        non-membrane-bounded organelle 5183
          intracellular non-membrane-bounded organelle 5172
            chromosome 1419
              chromosomal region 289
                chromosome, centromeric region 188
                  kinetochore 126
                    condensed chromosome kinetochore 73
                      condensed chromosome outer kinetochore 15
                        condensed nuclear chromosome outer kinetochore + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.