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ONTOLOGY REPORT - ANNOTATIONS


Term:outer kinetochore
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Accession:GO:0000940 term browser browse the term
Definition:The region of a kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions.
Synonyms:exact_synonym: condensed chromosome outer kinetochore;   condensed nuclear chromosome outer kinetochore;   outer kinetochore of condensed chromosome;   outer kinetochore of condensed nuclear chromosome
 narrow_synonym: outer kinetochore plate
 alt_id: GO:0000942


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outer kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bod1 biorientation of chromosomes in cell division 1 part_of IBA
ISO
PMID:21873635
(PMID:17938248)
RGD PMID:17938248 PMID:21873635 RGD:13792537 NCBI chr10:15,993,454...15,999,795
Ensembl chr10:15,993,454...15,999,787
JBrowse link
G Bod1l1 biorientation of chromosomes in cell division 1-like 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:69,108,483...69,163,255
Ensembl chr14:69,108,491...69,162,490
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B part_of ISO (PMID:19468067)
(MGI:2682084|PMID:14519686), (MGI:3839184|PMID:19283064)
RGD PMID:14519686 PMID:19283064 PMID:19468067 MGI:2682084 MGI:3839184 NCBI chr 3:105,563,089...105,615,547
Ensembl chr 3:105,563,138...105,615,547
JBrowse link
G Ccnb1 cyclin B1 part_of ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172
JBrowse link
G Cenpe centromere protein E part_of ISO (MGI:3839184|PMID:19283064) RGD PMID:19283064 MGI:3839184 NCBI chr 2:223,637,035...223,695,692
Ensembl chr 2:223,636,998...223,695,669
JBrowse link
G Cenpf centromere protein F part_of ISO (PMID:7542657), (PMID:7642639), (PMID:7904902) RGD PMID:7542657 PMID:7642639 PMID:7904902 NCBI chr13:101,184,127...101,229,714
Ensembl chr13:101,184,127...101,229,669
JBrowse link
G Crebbp CREB binding protein part_of ISO (MGI:2682084|PMID:14519686) RGD PMID:14519686 MGI:2682084 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888
JBrowse link
G Ndc80 NDC80 kinetochore complex component part_of ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 9:111,407,191...111,440,921
Ensembl chr 9:111,407,191...111,440,924
JBrowse link
G Nup133 nucleoporin 133 colocalizes_with
part_of
ISO
IEA
(PMID:17363900)
GO_REF:0000107
RGD
Ensembl
PMID:17363900 GO_REF:0000107 NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239
JBrowse link
G Plk1 polo-like kinase 1 part_of IEA
ISO
GO_REF:0000107
(PMID:18195732)
Ensembl
RGD
PMID:18195732 GO_REF:0000107 NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400
JBrowse link
G Ska1 spindle and kinetochore associated complex subunit 1 part_of ISO
IBA
ISS
(PMID:17093495), (PMID:19289083)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:17093495 PMID:19289083 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr18:67,794,722...67,805,037
Ensembl chr18:67,794,725...67,805,037
JBrowse link
G Ska2 spindle and kinetochore associated complex subunit 2 part_of ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:17093495), (PMID:19289083)
UniProt
RGD
PMID:17093495 PMID:19289083 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:71,921,474...71,939,461
Ensembl chr10:71,921,582...71,939,458
JBrowse link
G Ska3 spindle and kinetochore associated complex subunit 3 part_of ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:19289083)
UniProt
RGD
PMID:19289083 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:31,951,812...31,971,010
Ensembl chr15:31,951,825...31,971,010
JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 part_of IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:19468067)
UniProt
RGD
PMID:19468067 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:19,269,125...19,294,213
Ensembl chr10:19,269,127...19,294,127
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20010
    protein-containing complex 6011
      outer kinetochore 14
        DASH complex 0
Path 2
Term Annotations click to browse term
  cellular_component 20010
    cellular anatomical entity 19714
      organelle 13093
        non-membrane-bounded organelle 4903
          intracellular non-membrane-bounded organelle 4903
            chromosome 1168
              chromosomal region 277
                chromosome, centromeric region 183
                  condensed chromosome, centromeric region 133
                    kinetochore 122
                      outer kinetochore 14
                        DASH complex 0
paths to the root