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ONTOLOGY REPORT - ANNOTATIONS


Term:condensed chromosome inner kinetochore
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Accession:GO:0000939 term browser browse the term
Definition:The region of a condensed chromosome kinetochore closest to centromeric DNA; in mammals the CREST antigens (CENP proteins) are found in this layer; this layer may help define underlying centromeric chromatin structure and position of the kinetochore on the chromosome.
Synonyms:exact_synonym: inner kinetochore of condensed chromosome
 narrow_synonym: inner kinetochore plate
 related_synonym: inner centromere core complex


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condensed chromosome inner kinetochore term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpa centromere protein A ISO (MGI:MGI:2682084|PMID:14519686) RGD PMID:14519686 MGI:MGI:2682084 NCBI chr 6:27,072,259...27,080,863
Ensembl chr 6:27,072,166...27,080,856
JBrowse link
G Orc2 origin recognition complex, subunit 2 ISO (MGI:MGI:2682084|PMID:14519686) RGD PMID:14519686 MGI:MGI:2682084 NCBI chr 9:65,350,630...65,387,293
Ensembl chr 9:65,350,627...65,387,169
JBrowse link
condensed nuclear chromosome inner kinetochore term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpk centromere protein K IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:34,312,766...34,373,945
Ensembl chr 2:34,312,766...34,335,776
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
Mis6-Sim4 complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpo centromere protein O IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:28,648,804...28,663,527
Ensembl chr 6:28,649,638...28,663,233
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    protein-containing complex 6093
      condensed chromosome inner kinetochore 5
        Mis6-Sim4 complex 1
        condensed nuclear chromosome inner kinetochore 2
Path 2
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      organelle 13258
        non-membrane-bounded organelle 5183
          intracellular non-membrane-bounded organelle 5172
            chromosome 1419
              chromosomal region 289
                chromosome, centromeric region 188
                  kinetochore 126
                    condensed chromosome kinetochore 73
                      condensed chromosome inner kinetochore 5
                        Mis6-Sim4 complex 1
                        condensed nuclear chromosome inner kinetochore 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.