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ONTOLOGY REPORT - ANNOTATIONS

Term:inner kinetochore
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Accession:GO:0000939 term browser browse the term
Definition:The region of a kinetochore closest to centromeric DNA which contains many CENP proteins organized in various subcomplexes including CENP-C, CENP-LN, CENP-HIKM, CENP-OPQUR and CENP-TWSX, but excluding the CENP-A containing heterochromatin.
Synonyms:exact_synonym: condensed chromosome inner kinetochore;   condensed nuclear chromosome inner kinetochore;   inner kinetochore of condensed chromosome;   inner kinetochore of condensed nuclear chromosome
 narrow_synonym: inner kinetochore plate
 related_synonym: inner centromere core complex
 alt_id: GO:0000941


show annotations for term's descendants           Sort by:
inner kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpc centromere protein C located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr14:21,988,067...22,046,732
Ensembl chr14:21,988,144...22,055,476 		JBrowse link
G Cenph centromere protein H located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr 2:31,896,675...31,910,179
Ensembl chr 2:31,894,667...31,910,154 		JBrowse link
G Cenpi centromere protein I located_in
part_of		 ISO
IEA
IBA		 (PMID:36085283)
GO_REF:0000107
GO_REF:0000033
GO_REF:0000118		 RGD
Ensembl
GO_Central
TreeGrafter		 PMID:36085283 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:97,515,919...97,567,671
Ensembl chr  X:97,515,972...97,567,657 		JBrowse link
G Cenpk centromere protein K located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr 2:35,360,390...35,421,372
Ensembl chr 2:35,360,132...35,385,706 		JBrowse link
G Cenpl centromere protein L located_in
part_of		 ISO
IEA		 (PMID:36085283)
GO_REF:0000107		 RGD
Ensembl		 PMID:36085283 GO_REF:0000107 NCBI chr13:73,337,235...73,352,115
Ensembl chr13:73,337,257...73,352,114 		JBrowse link
G Cenpm centromere protein M located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr 7:113,748,026...113,759,296
Ensembl chr 7:113,747,516...113,764,258 		JBrowse link
G Cenpn centromere protein N located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr19:44,971,265...44,994,019
Ensembl chr19:44,968,308...44,994,012 		JBrowse link
G Cenpo centromere protein O located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr 6:27,203,642...27,218,394
Ensembl chr 6:27,188,537...27,218,314 		JBrowse link
G Cenpp centromere protein P located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr17:15,014,087...15,189,312
Ensembl chr17:15,014,058...15,189,304 		JBrowse link
G Cenpq centromere protein Q located_in
part_of		 ISO
IEA		 (PMID:36085283)
GO_REF:0000107		 RGD
Ensembl		 PMID:36085283 GO_REF:0000107 NCBI chr 9:19,957,122...19,972,807
Ensembl chr 9:19,957,048...19,972,789 		JBrowse link
G Cenps centromere protein S located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr 5:159,563,917...159,573,534 JBrowse link
G Cenpt centromere protein T located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr19:33,734,684...33,741,159
Ensembl chr19:33,734,685...33,741,142 		JBrowse link
G Cenpu centromere protein U located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr16:45,715,821...45,739,038
Ensembl chr16:45,714,294...45,738,823 		JBrowse link
G Cenpw centromere protein W located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr 1:27,525,324...27,530,464
Ensembl chr 1:27,525,324...27,530,464 		JBrowse link
G Cenpx centromere protein X located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr10:105,991,469...105,994,310 JBrowse link
G H3f3a H3.3 histone A part_of ISO (PMID:25645018) RGD PMID:25645018 NCBI chr13:92,533,289...92,544,902
Ensembl chr13:92,533,298...92,544,908 		JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein located_in ISO (PMID:36085283) RGD PMID:36085283 NCBI chr 5:114,460,217...114,525,538
Ensembl chr 5:114,460,221...114,525,704 		JBrowse link
G Orc2 origin recognition complex, subunit 2 part_of ISO (PMID:14519686) RGD PMID:14519686 NCBI chr 9:60,001,631...60,038,301
Ensembl chr 9:60,001,910...60,038,195 		JBrowse link
Mis6-Sim4 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpo centromere protein O part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:27,203,642...27,218,394
Ensembl chr 6:27,188,537...27,218,314 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21392
    protein-containing complex 6987
      inner kinetochore 18
        Mis6-Sim4 complex 1
Path 2
Term Annotations click to browse term
  cellular_component 21392
    cellular anatomical entity 21234
      organelle 14344
        non-membrane-bounded organelle 5378
          intracellular non-membrane-bounded organelle 5376
            chromosome 1419
              chromosomal region 353
                chromosome, centromeric region 252
                  condensed chromosome, centromeric region 171
                    kinetochore 159
                      inner kinetochore 18
                        Mis6-Sim4 complex 1
paths to the root