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ONTOLOGY REPORT - ANNOTATIONS


Term:Swr1 complex
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Accession:GO:0000812 term browser browse the term
Definition:A multisubunit protein complex that is involved in chromatin remodeling. It is required for the incorporation of the histone variant H2AZ into chromatin. In S. cerevisiae, the complex contains Swr1p, a Swi2/Snf2-related ATPase, and 12 additional subunits.
Synonyms:exact_synonym: SWR-C


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Swr1 complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr6 actin related protein 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:30,377,369...30,397,922
Ensembl chr 7:30,377,360...30,397,930
JBrowse link
G Anp32e acidic nuclear phosphoprotein 32 family member E ISO
ISS
(PMID:24463511)
GO_REF:0000024
RGD
UniProt
PMID:24463511 GO_REF:0000024 NCBI chr 2:198,040,573...198,057,005
Ensembl chr 2:198,040,536...198,057,003
JBrowse link
G Brd8 bromodomain containing 8 ISO (PMID:24463511) RGD PMID:24463511 NCBI chr18:27,375,645...27,423,989
Ensembl chr18:27,398,688...27,424,090
JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:136,533,791...136,541,795
Ensembl chr 5:136,533,792...136,541,795
JBrowse link
G Ep400 E1A binding protein p400 ISO (PMID:24463511) RGD PMID:24463511 NCBI chr12:51,948,650...52,055,274
Ensembl chr12:51,948,650...52,055,271
JBrowse link
G Ing3 inhibitor of growth family, member 3 ISO
ISS
(PMID:24463511)
GO_REF:0000024
RGD
UniProt
PMID:24463511 GO_REF:0000024 NCBI chr 4:49,017,235...49,044,450
Ensembl chr 4:49,017,311...49,042,990
JBrowse link
G Kat5 lysine acetyltransferase 5 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:24463511)
Ensembl
UniProt
RGD
PMID:24463511 GO_REF:0000024, GO_REF:0000107 NCBI chr 1:220,967,795...220,974,596
Ensembl chr 1:220,967,796...220,974,597
JBrowse link
G RGD1564855 similar to RuvB-like protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:1,854,580...1,856,333
Ensembl chr  X:1,854,751...1,856,258
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 ISO
IBA
ISS
(PMID:24463511)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24463511, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 4:120,411,917...120,447,458
Ensembl chr 4:120,411,991...120,447,455
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 ISO
IBA
(PMID:24463511)
PMID:21873635
RGD PMID:24463511, PMID:21873635 RGD:13792537 NCBI chr 1:101,413,766...101,426,970
Ensembl chr 1:101,413,766...101,426,852
JBrowse link
G Srcap Snf2-related CREBBP activator protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:198,957,764...199,007,576
Ensembl chr 1:198,960,542...199,007,347
JBrowse link
G Trrap transformation/transcription domain-associated protein ISO (PMID:24463511) RGD PMID:24463511 NCBI chr12:11,537,950...11,627,563
Ensembl chr12:11,537,950...11,627,563
JBrowse link
G Znhit1 zinc finger, HIT-type containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:22,726,643...22,732,917
Ensembl chr12:22,726,643...22,732,943
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    protein-containing complex 6093
      catalytic complex 1487
        histone deacetylase complex 81
          Swr1 complex 13
Path 2
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      intracellular anatomical structure 14706
        intracellular organelle 12912
          intracellular membrane-bounded organelle 10704
            nucleus 7183
              nuclear lumen 4262
                nuclear chromosome 964
                  nuclear chromatin 754
                    SWI/SNF superfamily-type complex 78
                      INO80-type complex 25
                        Swr1 complex 13
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.