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ONTOLOGY REPORT - ANNOTATIONS


Term:lateral element
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Accession:GO:0000800 term browser browse the term
Definition:A proteinaceous core found between sister chromatids during meiotic prophase.
Comment:In species that have a synaptonemal complex, the lateral elements are part of this complex. S.pombe is an example of a species that lacks a (canonical) synaptonemal complex, but still has lateral elements.
Synonyms:exact_synonym: axial element


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lateral element term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027258.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:21,430,337...21,484,456 JBrowse link
G Blm BLM RecQ like helicase ISO (PMID:10728666) RGD PMID:10728666 NCBI chr 1:142,246,773...142,332,616
Ensembl chr 1:142,246,790...142,332,588
JBrowse link
G Brca1 BRCA1, DNA repair associated IEA
ISO
GO_REF:0000107
(PMID:9774970)
Ensembl
RGD
PMID:9774970 GO_REF:0000107 NCBI chr10:89,394,821...89,455,093
Ensembl chr10:89,394,803...89,454,681
JBrowse link
G Brca2 BRCA2, DNA repair associated IEA
ISO
GO_REF:0000107
(PMID:9774970)
Ensembl
RGD
PMID:9774970 GO_REF:0000107 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Incenp inner centromere protein ISO (MGI:3839184|PMID:19283064) RGD PMID:19283064 MGI:3839184 NCBI chr 1:225,923,448...225,953,384
Ensembl chr 1:225,925,773...225,952,516
JBrowse link
G Kash5 KASH domain containing 5 IBA
ISO
PMID:21873635
(MGI:5515826|PMID:24062341)
RGD PMID:24062341, PMID:21873635 MGI:5515826, RGD:13792537 NCBI chr 1:101,180,497...101,203,048
Ensembl chr 1:101,180,657...101,198,801
JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 IBA
ISO
PMID:21873635
(MGI:4457793|PMID:20551173)
RGD PMID:20551173, PMID:21873635 MGI:4457793, RGD:13792537 NCBI chr 8:89,369,417...89,556,942
Ensembl chr 8:89,369,417...89,556,942
JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 ISO (MGI:5288570|PMID:21743440) RGD PMID:21743440 MGI:5288570 NCBI chr 3:147,163,335...147,191,008
Ensembl chr 3:147,163,838...147,188,929
JBrowse link
G Rad51 RAD51 recombinase ISO (PMID:9774970)
(MGI:3813746|PMID:18694567), (MGI:5288570|PMID:21743440)
RGD PMID:9774970, PMID:18694567, PMID:21743440 MGI:3813746, MGI:5288570 NCBI chr 3:110,918,240...110,942,920
Ensembl chr 3:110,918,243...110,942,917
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:3578071|PMID:15870106) RGD PMID:15870106 MGI:3578071 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
G Rpa1 replication protein A1 ISO (MGI:5288570|PMID:21743440), (MGI:5428050|PMID:22711701) RGD PMID:21743440, PMID:22711701 MGI:5288570, MGI:5428050 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Smc1b structural maintenance of chromosomes 1B ISO (MGI:3578071|PMID:15870106), (MGI:5428050|PMID:22711701) RGD PMID:15870106, PMID:22711701 MGI:3578071, MGI:5428050 NCBI chr 7:125,966,480...126,028,287
Ensembl chr 7:125,966,480...126,028,279
JBrowse link
G Smc3 structural maintenance of chromosomes 3 IEA
ISO
GO_REF:0000107
(MGI:3578071|PMID:15870106), (MGI:5428050|PMID:22711701)
Ensembl
RGD
PMID:15870106, PMID:22711701 GO_REF:0000107, MGI:3578071, MGI:5428050 NCBI chr 1:274,310,120...274,352,856
Ensembl chr 1:274,309,758...274,352,854
JBrowse link
G Stag3 stromal antigen 3 ISO (MGI:5428050|PMID:22711701) RGD PMID:22711701 MGI:5428050 NCBI chr12:19,599,741...19,630,775
Ensembl chr12:19,599,834...19,630,780
JBrowse link
G Sycp2 synaptonemal complex protein 2 IDA
ISO
IBA
PMID:9933407
(MGI:3794139|PMID:18283110), (MGI:5314623|PMID:22011390), (MGI:5428050|PMID:22711701), (MGI:5470363|PMID:23133398)
PMID:21873635
RGD PMID:18283110, PMID:22011390, PMID:22711701, PMID:23133398, PMID:9933407, PMID:21873635 MGI:3794139, MGI:5314623, MGI:5428050, MGI:5470363, RGD:11035335, RGD:13792537 NCBI chr 3:173,884,559...173,948,304
Ensembl chr 3:173,884,287...173,947,018
JBrowse link
G Sycp2l synaptonemal complex protein 2-like ISO (MGI:5692009|PMID:26362258) RGD PMID:26362258 MGI:5692009 NCBI chr17:21,430,470...21,486,091 JBrowse link
G Sycp3 synaptonemal complex protein 3 IDA
ISO
PMID:9933407
(MGI:1352918|PMID:10678170), (MGI:3839184|PMID:19283064), (MGI:4452449|PMID:18802469), (MGI:5049827|PMID:21539824), (MGI:5288570|PMID:21743440), (MGI:5314623|PMID:22011390), (MGI:5428050|PMID:22711701), (MGI:5470363|PMID:23133398), (MGI:5477835|PMID:23555294), (MGI:5504589|PMID:22854038), (MGI:5609844|PMID:25533956), (MGI:5661094|PMID:25675407)
RGD PMID:10678170, PMID:18802469, PMID:19283064, PMID:21539824, PMID:21743440, PMID:22011390, PMID:22711701, PMID:22854038, PMID:23133398, PMID:23555294, PMID:25533956, PMID:25675407, PMID:9933407 MGI:1352918, MGI:3839184, MGI:4452449, MGI:5049827, MGI:5288570, MGI:5314623, MGI:5428050, MGI:5470363, MGI:5477835, MGI:5504589, MGI:5609844, MGI:5661094, RGD:11035335 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      lateral element 17
Path 2
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      organelle 13274
        membrane-bounded organelle 11259
          intracellular membrane-bounded organelle 10515
            nucleus 6984
              nuclear lumen 3832
                nuclear chromosome 248
                  condensed nuclear chromosome 100
                    synaptonemal structure 48
                      synaptonemal complex 48
                        lateral element 17
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.