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ONTOLOGY REPORT - ANNOTATIONS

Term:lateral element
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Accession:GO:0000800 term browser browse the term
Definition:A proteinaceous core found between sister chromatids during meiotic prophase.
Comment:In species that have a synaptonemal complex, the lateral elements are part of this complex. S.pombe is an example of a species that lacks a (canonical) synaptonemal complex, but still has lateral elements.
Synonyms:exact_synonym: axial element


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lateral element term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027258.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:23,592,899...23,648,306 JBrowse link
G Blm BLM RecQ like helicase located_in ISO (PMID:10728666) RGD PMID:10728666 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Brca1 BRCA1, DNA repair associated located_in ISO
IEA		 (PMID:9774970)
GO_REF:0000107		 RGD
Ensembl		 PMID:9774970 GO_REF:0000107 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G Brca2 BRCA2, DNA repair associated located_in ISO
IEA		 (PMID:9774970)
GO_REF:0000107		 RGD
Ensembl		 PMID:9774970 GO_REF:0000107 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567 		JBrowse link
G Incenp inner centromere protein located_in ISO (MGI:3839184|PMID:19283064) RGD PMID:19283064 MGI:3839184 NCBI chr 1:206,520,655...206,550,575
Ensembl chr 1:206,523,380...206,553,265 		JBrowse link
G Kash5 KASH domain containing 5 located_in
is_active_in		 ISO
IBA		 (MGI:5515826|PMID:24062341)
PMID:21873635		 RGD PMID:24062341 PMID:21873635 MGI:5515826, RGD:13792537 NCBI chr 1:95,668,918...95,691,353
Ensembl chr 1:95,668,886...95,691,368 		JBrowse link
G Mei4 meiotic double-stranded break formation protein 4 located_in
is_active_in		 ISO
IBA		 (MGI:4457793|PMID:20551173)
PMID:21873635		 RGD PMID:20551173 PMID:21873635 MGI:4457793, RGD:13792537 NCBI chr 8:82,765,661...82,939,649
Ensembl chr 8:82,765,661...82,939,649 		JBrowse link
G Rad21l1 RAD21 cohesin complex component like 1 located_in ISO (MGI:5288570|PMID:21743440) RGD PMID:21743440 MGI:5288570 NCBI chr 3:140,160,128...140,188,324
Ensembl chr 3:140,160,118...140,188,298 		JBrowse link
G Rad51 RAD51 recombinase located_in ISO (MGI:3813746|PMID:18694567), (MGI:5288570|PMID:21743440)
(PMID:9774970)		 RGD PMID:9774970 PMID:18694567 PMID:21743440 MGI:3813746 MGI:5288570 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
G Rec8 REC8 meiotic recombination protein located_in ISO (MGI:3578071|PMID:15870106) RGD PMID:15870106 MGI:3578071 NCBI chr15:29,109,862...29,117,327
Ensembl chr15:29,109,863...29,117,326 		JBrowse link
G Rpa1 replication protein A1 located_in ISO (MGI:5288570|PMID:21743440), (MGI:5428050|PMID:22711701) RGD PMID:21743440 PMID:22711701 MGI:5288570 MGI:5428050 NCBI chr10:60,148,869...60,199,999
Ensembl chr10:60,148,793...60,199,949 		JBrowse link
G Smc1b structural maintenance of chromosomes 1B located_in ISO (MGI:3578071|PMID:15870106), (MGI:5428050|PMID:22711701) RGD PMID:15870106 PMID:22711701 MGI:3578071 MGI:5428050 NCBI chr 7:116,180,987...116,242,778
Ensembl chr 7:116,180,987...116,242,744 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 located_in IEA
ISO		 GO_REF:0000107
(MGI:3578071|PMID:15870106), (MGI:5428050|PMID:22711701)		 Ensembl
RGD		 PMID:15870106 PMID:22711701 GO_REF:0000107 MGI:3578071 MGI:5428050 NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522 		JBrowse link
G Stag3 stromal antigen 3 located_in ISO (MGI:5428050|PMID:22711701) RGD PMID:22711701 MGI:5428050 NCBI chr12:17,284,677...17,314,936
Ensembl chr12:17,284,794...17,314,935 		JBrowse link
G Sycp2 synaptonemal complex protein 2 located_in
is_active_in		 IDA
IBA
ISO		 PMID:9933407
PMID:21873635
(MGI:3794139|PMID:18283110), (MGI:5314623|PMID:22011390), (MGI:5428050|PMID:22711701), (MGI:5470363|PMID:23133398)		 RGD PMID:18283110 PMID:22011390 PMID:22711701 PMID:23133398 PMID:9933407 More... MGI:3794139 MGI:5314623 MGI:5428050 MGI:5470363, RGD:11035335, RGD:13792537, RGD:13792537 NCBI chr 3:165,431,715...165,502,134
Ensembl chr 3:165,436,331...165,498,789 		JBrowse link
G Sycp2l synaptonemal complex protein 2-like located_in ISO (MGI:5692009|PMID:26362258) RGD PMID:26362258 MGI:5692009 NCBI chr17:23,589,217...23,645,273 JBrowse link
G Sycp3 synaptonemal complex protein 3 located_in IDA
ISO		 PMID:9933407
(MGI:1352918|PMID:10678170), (MGI:3839184|PMID:19283064), (MGI:4452449|PMID:18802469), (MGI:5049827|PMID:21539824), (MGI:5288570|PMID:21743440), (MGI:5314623|PMID:22011390), (MGI:5428050|PMID:22711701), (MGI:5470363|PMID:23133398), (MGI:5477835|PMID:23555294), (MGI:5504589|PMID:22854038), (MGI:5609844|PMID:25533956), (MGI:5661094|PMID:25675407)		 RGD PMID:10678170 PMID:18802469 PMID:19283064 PMID:21539824 PMID:21743440 More... MGI:1352918 MGI:3839184 MGI:4452449 MGI:5049827 MGI:5288570 MGI:5314623 MGI:5428050 MGI:5470363 MGI:5477835 MGI:5504589 MGI:5609844 MGI:5661094, RGD:11035335 NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      lateral element 17
Path 2
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19676
      intracellular anatomical structure 14364
        intracellular organelle 12730
          intracellular membrane-bounded organelle 11218
            nucleus 7051
              nuclear lumen 3941
                nuclear chromosome 245
                  condensed nuclear chromosome 88
                    synaptonemal structure 46
                      synaptonemal complex 46
                        lateral element 17
paths to the root