Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:condensin complex
go back to main search page
Accession:GO:0000796 term browser browse the term
Definition:A multisubunit protein complex that plays a central role in chromosome condensation.
Synonyms:narrow_synonym: 13S condensin complex
 related_synonym: SMC complex
 alt_id: GO:0005676;   GO:0008620


show annotations for term's descendants           Sort by:
 
condensin complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncapd2 non-SMC condensin I complex, subunit D2 ISO (MGI:MGI:5317363|PMID:21795393)
(PMID:11136719), (PMID:12138188)
RGD PMID:11136719, PMID:12138188, PMID:21795393 MGI:MGI:5317363 NCBI chr 4:157,682,855...157,705,903
Ensembl chr 4:157,683,077...157,704,596
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 ISO (MGI:MGI:5317363|PMID:21795393) RGD PMID:21795393 MGI:MGI:5317363 NCBI chr 8:28,075,629...28,145,024
Ensembl chr 8:28,075,551...28,144,741
JBrowse link
G Ncapg non-SMC condensin I complex, subunit G ISO (MGI:MGI:5317363|PMID:21795393)
(PMID:11136719)
RGD PMID:11136719, PMID:21795393 MGI:MGI:5317363 NCBI chr14:69,898,268...69,927,885
Ensembl chr14:69,899,128...69,927,938
JBrowse link
G Ncapg2 non-SMC condensin II complex, subunit G2 ISO
IBA
(MGI:MGI:5317363|PMID:21795393)
PMID:21873635
RGD PMID:21795393, PMID:21873635 MGI:MGI:5317363, RGD:13792537 NCBI chr 6:144,291,313...144,362,454
Ensembl chr 6:144,291,974...144,363,947
JBrowse link
G Ncaph non-SMC condensin I complex, subunit H ISO (PMID:11136719)
UniProtKB:Q8BSP2 (MGI:MGI:5317363|PMID:21795393), (MGI:MGI:5644098|PMID:25474630)
RGD PMID:11136719, PMID:21795393, PMID:25474630 MGI:MGI:5317363, MGI:MGI:5644098 NCBI chr 3:119,583,798...119,611,148
Ensembl chr 3:119,583,648...119,611,136
JBrowse link
G Ncaph2 non-SMC condensin II complex, subunit H2 IEA
ISO
IBA
GO_REF:0000107
UniProtKB:Q8CG48 (MGI:MGI:5317363|PMID:21795393), (MGI:MGI:5644098|PMID:25474630)
PMID:21873635
Ensembl
RGD
PMID:21795393, PMID:25474630, PMID:21873635 GO_REF:0000107, MGI:MGI:5317363, MGI:MGI:5644098, RGD:13792537 NCBI chr 7:130,326,597...130,343,655
Ensembl chr 7:130,326,600...130,342,493
JBrowse link
G Smc2 structural maintenance of chromosomes 2 ISO (PMID:10958694), (PMID:11136719)
UniProtKB:Q8BSP2|UniProtKB:Q8C156 (MGI:MGI:5317363|PMID:21795393), (MGI:MGI:5644098|PMID:25474630)
RGD PMID:10958694, PMID:11136719, PMID:21795393, PMID:25474630 MGI:MGI:5317363, MGI:MGI:5644098 NCBI chr 5:68,717,509...68,764,080
Ensembl chr 5:68,717,519...68,763,850
JBrowse link
G Smc4 structural maintenance of chromosomes 4 ISO (MGI:MGI:5317363|PMID:21795393)
(PMID:11136719)
RGD PMID:11136719, PMID:21795393 MGI:MGI:5317363 NCBI chr 2:165,600,934...165,629,415
Ensembl chr 2:165,601,007...165,629,415
JBrowse link
condensin core heterodimer term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smc2 structural maintenance of chromosomes 2 ISO (PMID:9789013) RGD PMID:9789013 NCBI chr 5:68,717,509...68,764,080
Ensembl chr 5:68,717,519...68,763,850
JBrowse link
G Smc4 structural maintenance of chromosomes 4 ISO (PMID:9789013) RGD PMID:9789013 NCBI chr 2:165,600,934...165,629,415
Ensembl chr 2:165,601,007...165,629,415
JBrowse link
nuclear condensin complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncapd2 non-SMC condensin I complex, subunit D2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:157,682,855...157,705,903
Ensembl chr 4:157,683,077...157,704,596
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 ISO
IBA
(PMID:14532007)
PMID:21873635
RGD PMID:14532007, PMID:21873635 RGD:13792537 NCBI chr 8:28,075,629...28,145,024
Ensembl chr 8:28,075,551...28,144,741
JBrowse link
G Ncaph non-SMC condensin I complex, subunit H IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:119,583,798...119,611,148
Ensembl chr 3:119,583,648...119,611,136
JBrowse link
G Smc4 structural maintenance of chromosomes 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:165,600,934...165,629,415
Ensembl chr 2:165,601,007...165,629,415
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    protein-containing complex 6104
      DNA packaging complex 111
        condensin complex 8
          condensin I complex 0
          condensin core heterodimer 2
          nuclear condensin complex 4
Path 2
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      organelle 13271
        non-membrane-bounded organelle 5195
          intracellular non-membrane-bounded organelle 5178
            chromosome 1423
              condensed chromosome 202
                condensin complex 8
                  condensin I complex 0
                  condensin core heterodimer 2
                  nuclear condensin complex 4
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.