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ONTOLOGY REPORT - ANNOTATIONS


Term:chromatin
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Accession:GO:0000785 term browser browse the term
Definition:The ordered and organized complex of DNA, protein, and sometimes RNA, that forms the chromosome.
Comment:Chromosomes include parts that are not part of the chromatin. Examples include the kinetochore.
Synonyms:related_synonym: chromosome scaffold
 alt_id: GO:0005717
 xref: NIF_Subcellular:sao1615953555


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chromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G 1700013H16Rik RIKEN cDNA 1700013H16 gene JBrowse link X 53,742,901 53,757,970 RGD:2290270
G Ahctf1 AT hook containing transcription factor 1 JBrowse link 1 179,744,904 179,804,015 RGD:2290270
G Akap8l A kinase (PRKA) anchor protein 8-like JBrowse link 17 32,321,424 32,350,616 RGD:2290270
G Ankrd17 ankyrin repeat domain 17 JBrowse link 5 90,227,166 90,368,693 RGD:2290270
G Aptx aprataxin JBrowse link 4 40,682,078 40,721,667 RGD:2290270
G Arrb1 arrestin, beta 1 JBrowse link 7 99,535,147 99,606,772 RGD:2290270
G Asf1b anti-silencing function 1B histone chaperone JBrowse link 8 83,955,694 83,970,195 RGD:2290270
G Atp1b4 ATPase, (Na+)/K+ transporting, beta 4 polypeptide JBrowse link X 38,316,122 38,336,784 RGD:2290270
G Basp1 brain abundant, membrane attached signal protein 1 JBrowse link 15 25,363,277 25,413,764 RGD:2290270
G Capn2 calpain 2 JBrowse link 1 182,467,253 182,517,610 RGD:2290270
G Cbx1 chromobox 1 JBrowse link 11 96,788,680 96,808,982 RGD:2290270
G Cbx3 chromobox 3 JBrowse link 6 51,470,154 51,483,704 RGD:2290270
G Ccnd2 cyclin D2 JBrowse link 6 127,125,162 127,152,188 RGD:2290270
G Cdca5 cell division cycle associated 5 JBrowse link 19 6,085,097 6,091,773 RGD:2290270
G Cdk4 cyclin-dependent kinase 4 JBrowse link 10 127,063,535 127,067,288 RGD:2290270
G Chd5 chromodomain helicase DNA binding protein 5 JBrowse link 4 152,338,646 152,390,194 RGD:2290270
G Chek1 checkpoint kinase 1 JBrowse link 9 36,708,482 36,726,658 RGD:2290270
G Chmp2a charged multivesicular body protein 2A JBrowse link 7 13,032,006 13,034,777 RGD:2290270
G Chmp7 charged multivesicular body protein 7 JBrowse link 14 69,716,979 69,732,570 RGD:2290270
G Cops5 COP9 signalosome subunit 5 JBrowse link 1 10,024,600 10,038,159 RGD:2290270
G Creb1 cAMP responsive element binding protein 1 JBrowse link 1 64,532,794 64,604,548 RGD:2290270
G Creb3l2 cAMP responsive element binding protein 3-like 2 JBrowse link 6 37,327,255 37,442,276 RGD:2290270
G Csnk2a1 casein kinase 2, alpha 1 polypeptide JBrowse link 2 152,226,535 152,281,856 RGD:2290270
G Csnk2a2 casein kinase 2, alpha prime polypeptide JBrowse link 8 95,446,096 95,488,868 RGD:2290270
G Csnk2b casein kinase 2, beta polypeptide JBrowse link 17 35,116,195 35,122,053 RGD:2290270
G Ddx23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 JBrowse link 15 98,645,379 98,662,928 RGD:2290270
G Dscc1 DNA replication and sister chromatid cohesion 1 JBrowse link 15 55,076,101 55,090,491 RGD:2290270
G Ep300 E1A binding protein p300 JBrowse link 15 81,586,209 81,652,077 RGD:2290270
G Esco1 establishment of sister chromatid cohesion N-acetyltransferase 1 JBrowse link 18 10,566,507 10,610,863 RGD:2290270
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 JBrowse link 14 65,819,027 65,833,969 RGD:2290270
G Fam111a family with sequence similarity 111, member A JBrowse link 19 12,573,510 12,589,769 RGD:2290270
G Fancc Fanconi anemia, complementation group C JBrowse link 13 63,301,334 63,497,292 RGD:2290270
G Fank1 fibronectin type 3 and ankyrin repeat domains 1 JBrowse link 7 133,776,836 133,881,536 RGD:2290270
G Fbh1 F-box DNA helicase 1 JBrowse link 2 11,742,573 11,777,585 RGD:2290270
G H2ax H2A.X variant histone JBrowse link 9 44,334,715 44,336,077 RGD:2290270
G H3c6 H3 clustered histone 6 JBrowse link 13 23,561,475 23,562,385 RGD:2290270
G Hand2os1 Hand2, opposite strand 1 JBrowse link 8 57,304,261 57,320,859 RGD:2290270
G Hdac1 histone deacetylase 1 JBrowse link 4 129,516,104 129,542,646 RGD:2290270
G Hdac2 histone deacetylase 2 JBrowse link 10 36,974,297 37,001,889 RGD:2290270
G Hdac3 histone deacetylase 3 JBrowse link 18 37,936,971 37,955,015 RGD:2290270
G Hes1 hes family bHLH transcription factor 1 JBrowse link 16 30,065,357 30,067,796 RGD:2290270
G Hic1 hypermethylated in cancer 1 JBrowse link 11 75,161,377 75,170,255 RGD:2290270
G Hlcs holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase) JBrowse link 16 94,129,306 94,315,239 RGD:2290270
G Hmga2 high mobility group AT-hook 2 JBrowse link 10 120,361,268 120,476,469 RGD:2290270
G Hmgn1 high mobility group nucleosomal binding domain 1 JBrowse link 16 96,121,588 96,127,725 RGD:2290270
G Hmgn3 high mobility group nucleosomal binding domain 3 JBrowse link 9 83,109,942 83,147,358 RGD:2290270
G Hmgn5 high-mobility group nucleosome binding domain 5 JBrowse link X 109,004,537 109,013,380 RGD:2290270
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 6 51,460,434 51,470,048 RGD:2290270
G Hr lysine demethylase and nuclear receptor corepressor JBrowse link 14 70,554,056 70,573,548 RGD:2290270
G Htra2 HtrA serine peptidase 2 JBrowse link 6 83,051,266 83,054,571 RGD:2290270
G Id2 inhibitor of DNA binding 2 JBrowse link 12 25,093,799 25,096,092 RGD:2290270
G Ist1 increased sodium tolerance 1 homolog (yeast) JBrowse link 8 109,671,321 109,693,297 RGD:2290270
G Jmjd1c jumonji domain containing 1C JBrowse link 10 67,096,351 67,256,326 RGD:2290270
G Kdm3a lysine (K)-specific demethylase 3A JBrowse link 6 71,588,970 71,632,990 RGD:2290270
G Kdm3b KDM3B lysine (K)-specific demethylase 3B JBrowse link 18 34,777,008 34,839,370 RGD:2290270
G Kif22 kinesin family member 22 JBrowse link 7 127,027,729 127,042,467 RGD:2290270
G Klf4 Kruppel-like factor 4 (gut) JBrowse link 4 55,527,137 55,532,475 RGD:2290270
G Kmt2e lysine (K)-specific methyltransferase 2E JBrowse link 5 23,433,036 23,504,235 RGD:2290270
G L3mbtl1 L3MBTL1 histone methyl-lysine binding protein JBrowse link 2 162,942,333 162,977,806 RGD:2290270
G Lemd2 LEM domain containing 2 JBrowse link 17 27,189,600 27,205,470 RGD:2290270
G Loxl2 lysyl oxidase-like 2 JBrowse link 14 69,608,692 69,695,834 RGD:2290270
G Macroh2a1 macroH2A.1 histone JBrowse link 13 56,073,622 56,135,626 RGD:2290270
G Macroh2a2 macroH2A.2 histone JBrowse link 10 61,738,640 61,784,604 RGD:2290270
G Mael maelstrom spermatogenic transposon silencer JBrowse link 1 166,201,385 166,238,744 RGD:2290270
G Maged1 melanoma antigen, family D, 1 JBrowse link X 94,535,474 94,542,025 RGD:2290270
G Mau2 MAU2 sister chromatid cohesion factor JBrowse link 8 70,013,246 70,042,734 RGD:2290270
G Mbd1 methyl-CpG binding domain protein 1 JBrowse link 18 74,267,605 74,282,737 RGD:2290270
G Mbd2 methyl-CpG binding domain protein 2 JBrowse link 18 70,568,225 70,629,134 RGD:2290270
G Mbd3 methyl-CpG binding domain protein 3 JBrowse link 10 80,392,539 80,399,531 RGD:2290270
G Mbd4 methyl-CpG binding domain protein 4 JBrowse link 6 115,840,697 115,853,400 RGD:2290270
G Mcm2 minichromosome maintenance complex component 2 JBrowse link 6 88,883,474 88,898,780 RGD:2290270
G Mecp2 methyl CpG binding protein 2 JBrowse link X 74,026,592 74,085,690 RGD:2290270
G Med1 mediator complex subunit 1 JBrowse link 11 98,152,154 98,193,313 RGD:2290270
G Men1 multiple endocrine neoplasia 1 JBrowse link 19 6,334,979 6,340,894 RGD:2290270
G Mis18a MIS18 kinetochore protein A JBrowse link 16 90,719,312 90,727,371 RGD:2290270
G Mtbp Mdm2, transformed 3T3 cell double minute p53 binding protein JBrowse link 15 55,557,404 55,626,423 RGD:2290270
G Ncor2 nuclear receptor co-repressor 2 JBrowse link 5 125,017,153 125,179,238 RGD:2290270
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 JBrowse link 2 75,675,513 75,704,663 RGD:2290270
G Nipbl NIPBL cohesin loading factor JBrowse link 15 8,289,824 8,465,315 RGD:2290270
G Nsd1 nuclear receptor-binding SET-domain protein 1 JBrowse link 13 55,209,782 55,318,325 RGD:2290270
G Nsd2 nuclear receptor binding SET domain protein 2 JBrowse link 5 33,820,676 33,897,966 RGD:2290270
G Nsd3 nuclear receptor binding SET domain protein 3 JBrowse link 8 25,601,601 25,719,667 RGD:2290270
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 JBrowse link 1 131,910,458 131,936,321 RGD:2290270
G Oip5 Opa interacting protein 5 JBrowse link 2 119,609,532 119,618,505 RGD:2290270
G Orc2 origin recognition complex, subunit 2 JBrowse link 1 58,462,771 58,505,113 RGD:2290270
G Orc3 origin recognition complex, subunit 3 JBrowse link 4 34,566,781 34,614,963 RGD:2290270
G Orc5 origin recognition complex, subunit 5 JBrowse link 5 22,486,480 22,550,338 RGD:2290270
G Parg poly (ADP-ribose) glycohydrolase JBrowse link 14 32,201,930 32,298,714 RGD:2290270
G Park7 Parkinson disease (autosomal recessive, early onset) 7 JBrowse link 4 150,897,133 150,909,921 RGD:2290270
G Parpbp PARP1 binding protein JBrowse link 10 88,091,398 88,146,969 RGD:2290270
G Pcna proliferating cell nuclear antigen JBrowse link 2 132,249,286 132,253,180 RGD:2290270
G Pds5a PDS5 cohesin associated factor A JBrowse link 5 65,605,719 65,698,236 RGD:2290270
G Pds5b PDS5 cohesin associated factor B JBrowse link 5 150,673,713 150,810,669 RGD:2290270
G Pink1 PTEN induced putative kinase 1 JBrowse link 4 138,313,409 138,326,296 RGD:2290270
G Plk1 polo like kinase 1 JBrowse link 7 122,159,435 122,169,884 RGD:2290270
G Plk2 polo like kinase 2 JBrowse link 13 110,395,044 110,400,844 RGD:2290270
G Plk3 polo like kinase 3 JBrowse link 4 117,128,655 117,133,963 RGD:2290270
G Pola1 polymerase (DNA directed), alpha 1 JBrowse link X 93,304,766 93,632,387 RGD:2290270
G Pou1f1 POU domain, class 1, transcription factor 1 JBrowse link 16 65,520,512 65,535,018 RGD:2290270
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 JBrowse link 17 35,916,512 35,932,283 RGD:2290270
G Prdm9 PR domain containing 9 JBrowse link 17 15,543,072 15,564,374 RGD:2290270
G Rad18 RAD18 E3 ubiquitin protein ligase JBrowse link 6 112,619,851 112,696,691 RGD:2290270
G Rad21 RAD21 cohesin complex component JBrowse link 15 51,962,604 51,993,538 RGD:2290270
G Rad51 RAD51 recombinase JBrowse link 2 119,112,814 119,136,073 RGD:2290270
G Ran RAN, member RAS oncogene family JBrowse link 5 129,020,156 129,024,322 RGD:2290270
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:2290270
G Rbl1 RB transcriptional corepressor like 1 JBrowse link 2 157,145,893 157,204,534 RGD:2290270
G Rbl2 RB transcriptional corepressor like 2 JBrowse link 8 91,070,057 91,123,844 RGD:2290270
G Rcc1 regulator of chromosome condensation 1 JBrowse link 4 132,331,919 132,345,750 RGD:2290270
G Rcor2 REST corepressor 2 JBrowse link 19 7,267,394 7,275,225 RGD:2290270
G Rest RE1-silencing transcription factor JBrowse link 5 77,265,494 77,286,432 RGD:2290270
G Rnf219 ring finger protein 219 JBrowse link 14 104,477,534 104,522,712 RGD:2290270
G Rpa2 replication protein A2 JBrowse link 4 132,768,360 132,778,746 RGD:2290270
G Satb1 special AT-rich sequence binding protein 1 JBrowse link 17 51,736,187 51,833,290 RGD:2290270
G Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 JBrowse link 4 3,995,942 4,019,663 RGD:2290270
G Sf3b1 splicing factor 3b, subunit 1 JBrowse link 1 54,985,169 55,027,501 RGD:2290270
G Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) JBrowse link 4 127,020,716 127,051,101 RGD:2290270
G Sin3a transcriptional regulator, SIN3A (yeast) JBrowse link 9 57,071,991 57,128,368 RGD:2290270
G Sin3b transcriptional regulator, SIN3B (yeast) JBrowse link 8 72,723,270 72,758,203 RGD:2290270
G Sirt1 sirtuin 1 JBrowse link 10 63,319,005 63,339,035 RGD:2290270
G Sirt7 sirtuin 7 JBrowse link 11 120,618,371 120,625,014 RGD:2290270
G Slf2 SMC5-SMC6 complex localization factor 2 JBrowse link 19 44,918,506 44,983,786 RGD:2290270
G Smc3 structural maintenance of chromosomes 3 JBrowse link 19 53,600,396 53,645,831 RGD:2290270
G Smcr8 Smith-Magenis syndrome chromosome region, candidate 8 homolog (human) JBrowse link 11 60,777,525 60,788,287 RGD:2290270
G Snw1 SNW domain containing 1 JBrowse link 12 87,449,910 87,472,299 RGD:2290270
G Sox10 SRY (sex determining region Y)-box 10 JBrowse link 15 79,154,913 79,164,490 RGD:2290270
G Srpk1 serine/arginine-rich protein specific kinase 1 JBrowse link 17 28,587,648 28,622,528 RGD:2290270
G Srpk2 serine/arginine-rich protein specific kinase 2 JBrowse link 5 23,503,356 23,684,642 RGD:2290270
G Stag1 stromal antigen 1 JBrowse link 9 100,597,709 100,958,544 RGD:2290270
G Stag2 stromal antigen 2 JBrowse link X 42,149,297 42,277,186 RGD:2290270
G Stag3 stromal antigen 3 JBrowse link 5 138,272,514 138,312,397 RGD:2290270
G Suv39h2 suppressor of variegation 3-9 2 JBrowse link 2 3,455,815 3,474,986 RGD:2290270
G T brachyury, T-box transcription factor T JBrowse link 17 8,434,423 8,442,496 RGD:2290270
G Tmpo thymopoietin JBrowse link 10 91,147,571 91,181,752 RGD:2290270
G Tox4 TOX high mobility group box family member 4 JBrowse link 14 52,279,146 52,295,509 RGD:2290270
G Trim28 tripartite motif-containing 28 JBrowse link 7 13,024,152 13,031,032 RGD:2290270
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:2290270
G Trp73 transformation related protein 73 JBrowse link 4 154,056,249 154,139,875 RGD:2290270
G Ube2a ubiquitin-conjugating enzyme E2A JBrowse link X 36,874,295 36,884,222 RGD:2290270
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 11 51,985,138 52,004,145 RGD:2290270
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 JBrowse link 17 46,928,291 47,010,886 RGD:2290270
G Upf1 UPF1 regulator of nonsense transcripts homolog (yeast) JBrowse link 8 70,331,493 70,353,423 RGD:2290270
G Uxt ubiquitously expressed prefoldin like chaperone JBrowse link X 20,951,665 20,962,017 RGD:2290270
G Wapl WAPL cohesin release factor JBrowse link 14 34,672,379 34,747,983 RGD:2290270
G Wdr43 WD repeat domain 43 JBrowse link 17 71,616,178 71,659,031 RGD:2290270
G Wdr82 WD repeat domain containing 82 JBrowse link 9 106,170,925 106,191,706 RGD:2290270
ASTRA complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Telo2 telomere maintenance 2 JBrowse link 17 25,099,569 25,115,974 RGD:2290270
G Tti1 TELO2 interacting protein 1 JBrowse link 2 157,981,803 158,028,475 RGD:2290270
G Tti2 TELO2 interacting protein 2 JBrowse link 8 31,150,316 31,164,703 RGD:2290270
brahma complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 10 75,896,769 75,921,614 RGD:2290270
CERF complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cecr2 CECR2, histone acetyl-lysine reader JBrowse link 6 120,666,314 120,771,191 RGD:2290270
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 JBrowse link X 47,809,370 47,892,613 RGD:2290270
CHRAC term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Baz1a bromodomain adjacent to zinc finger domain 1A JBrowse link 12 54,892,989 55,014,371 RGD:2290270
G Chrac1 chromatin accessibility complex 1 JBrowse link 15 73,090,412 73,094,075 RGD:2290270
G Pole3 polymerase (DNA directed), epsilon 3 (p17 subunit) JBrowse link 4 62,523,798 62,525,014 RGD:2290270
cytoplasmic chromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Npm2 nucleophosmin/nucleoplasmin 2 JBrowse link 14 70,647,296 70,661,802 RGD:2290270
euchromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd2 ankyrin repeat domain 2 (stretch responsive muscle) JBrowse link 19 42,035,917 42,045,111 RGD:2290270
G Cbx2 chromobox 2 JBrowse link 11 119,023,019 119,031,275 RGD:2290270
G Dnmt3a DNA methyltransferase 3A JBrowse link 12 3,801,559 3,914,443 RGD:2290270
G Dntt deoxynucleotidyltransferase, terminal JBrowse link 19 41,029,275 41,059,525 RGD:2290270
G Hsf1 heat shock factor 1 JBrowse link 15 76,477,362 76,501,155 RGD:2290270
G Jak2 Janus kinase 2 JBrowse link 19 29,251,803 29,313,095 RGD:2290270
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) JBrowse link X 101,640,011 101,684,351 RGD:2290270
G Rnf2 ring finger protein 2 JBrowse link 1 151,469,398 151,500,991 RGD:2290270
G Rrp1b ribosomal RNA processing 1 homolog B (S. cerevisiae) JBrowse link 17 32,036,162 32,062,865 RGD:2290270
G Uhrf1 ubiquitin-like, containing PHD and RING finger domains, 1 JBrowse link 17 56,303,337 56,323,486 RGD:2290270
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor JBrowse link 15 97,854,427 97,908,296 RGD:2290270
heterochromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atrx ATRX, chromatin remodeler JBrowse link X 105,797,615 105,929,372 RGD:2290270
G Bmi1 Bmi1 polycomb ring finger oncogene JBrowse link 2 18,677,018 18,686,629 RGD:2290270
G Cbx2 chromobox 2 JBrowse link 11 119,023,019 119,031,275 RGD:2290270
G Cbx5 chromobox 5 JBrowse link 15 103,191,546 103,239,904 RGD:2290270
G Cbx6 chromobox 6 JBrowse link 15 79,823,898 79,834,333 RGD:2290270
G Cbx7 chromobox 7 JBrowse link 15 79,915,804 79,971,143 RGD:2290270
G Cbx8 chromobox 8 JBrowse link 11 119,036,303 119,040,913 RGD:2290270
G Chd5 chromodomain helicase DNA binding protein 5 JBrowse link 4 152,338,646 152,390,194 RGD:2290270
G Daxx Fas death domain-associated protein JBrowse link 17 33,909,404 33,915,590 RGD:2290270
G Ddx6 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 JBrowse link 9 44,602,983 44,640,731 RGD:2290270
G Dnmt1 DNA methyltransferase (cytosine-5) 1 JBrowse link 9 20,907,206 20,959,888 RGD:2290270
G Dnmt3a DNA methyltransferase 3A JBrowse link 12 3,801,559 3,914,443 RGD:2290270
G Dnmt3b DNA methyltransferase 3B JBrowse link 2 153,649,411 153,687,730 RGD:2290270
G Hdac1 histone deacetylase 1 JBrowse link 4 129,516,104 129,542,646 RGD:2290270
G Hdac2 histone deacetylase 2 JBrowse link 10 36,974,297 37,001,889 RGD:2290270
G Hsf1 heat shock factor 1 JBrowse link 15 76,477,362 76,501,155 RGD:2290270
G Mbd1 methyl-CpG binding domain protein 1 JBrowse link 18 74,267,605 74,282,737 RGD:2290270
G Mbd2 methyl-CpG binding domain protein 2 JBrowse link 18 70,568,225 70,629,134 RGD:2290270
G Mbd3 methyl-CpG binding domain protein 3 JBrowse link 10 80,392,539 80,399,531 RGD:2290270
G Mecp2 methyl CpG binding protein 2 JBrowse link X 74,026,592 74,085,690 RGD:2290270
G Morc2a microrchidia 2A JBrowse link 11 3,649,189 3,690,477 RGD:2290270
G Mphosph8 M-phase phosphoprotein 8 JBrowse link 14 56,668,235 56,697,430 RGD:2290270
G Orc2 origin recognition complex, subunit 2 JBrowse link 1 58,462,771 58,505,113 RGD:2290270
G Phc2 polyhomeotic 2 JBrowse link 4 128,654,655 128,752,881 RGD:2290270
G Pml promyelocytic leukemia JBrowse link 9 58,217,179 58,249,796 RGD:2290270
G Rnf2 ring finger protein 2 JBrowse link 1 151,469,398 151,500,991 RGD:2290270
G Rrp1b ribosomal RNA processing 1 homolog B (S. cerevisiae) JBrowse link 17 32,036,162 32,062,865 RGD:2290270
G Sall1 spalt like transcription factor 1 JBrowse link 8 89,027,242 89,044,162 RGD:2290270
G Sall4 spalt like transcription factor 4 JBrowse link 2 168,748,332 168,767,201 RGD:2290270
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 9 21,616,106 21,704,230 RGD:2290270
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 JBrowse link 6 65,042,591 65,116,061 RGD:2290270
G Sumo1 small ubiquitin-like modifier 1 JBrowse link 1 59,639,434 59,670,834 RGD:2290270
G Suv39h1 suppressor of variegation 3-9 1 JBrowse link X 8,061,171 8,074,760 RGD:2290270
G Tasor transcription activation suppressor JBrowse link 14 27,423,674 27,483,555 RGD:2290270
G Tcp1 t-complex protein 1 JBrowse link 17 12,916,329 12,925,067 RGD:2290270
G Top2b topoisomerase (DNA) II beta JBrowse link 14 16,365,206 16,430,787 RGD:2290270
G Uba1 ubiquitin-like modifier activating enzyme 1 JBrowse link X 20,658,302 20,683,179 RGD:2290270
G Uhrf1 ubiquitin-like, containing PHD and RING finger domains, 1 JBrowse link 17 56,303,337 56,323,486 RGD:2290270
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor JBrowse link 15 97,854,427 97,908,296 RGD:2290270
G Wdr76 WD repeat domain 76 JBrowse link 2 121,506,723 121,544,860 RGD:2290270
HULC complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnf20 ring finger protein 20 JBrowse link 4 49,632,005 49,656,887 RGD:2290270
G Rnf40 ring finger protein 40 JBrowse link 7 127,588,698 127,603,605 RGD:2290270
G Ube2a ubiquitin-conjugating enzyme E2A JBrowse link X 36,874,295 36,884,222 RGD:2290270
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 11 51,985,138 52,004,145 RGD:2290270
Ino80 complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actl6a actin-like 6A JBrowse link 3 32,708,546 32,726,973 RGD:2290270
G Actr5 ARP5 actin-related protein 5 JBrowse link 2 158,624,881 158,639,211 RGD:2290270
G Actr8 ARP8 actin-related protein 8 JBrowse link 14 29,978,337 29,995,452 RGD:2290270
G Ino80 INO80 complex subunit JBrowse link 2 119,373,042 119,478,685 RGD:2290270
G Ino80b INO80 complex subunit B JBrowse link 6 83,121,765 83,125,119 RGD:2290270
G Ino80c INO80 complex subunit C JBrowse link 18 24,104,761 24,121,819 RGD:2290270
G Ino80e INO80 complex subunit E JBrowse link 7 126,851,584 126,862,372 RGD:2290270
G Mcrs1 microspherule protein 1 JBrowse link 15 99,242,817 99,251,961 RGD:2290270
G Nfrkb nuclear factor related to kappa B binding protein JBrowse link 9 31,386,162 31,421,333 RGD:2290270
G Ruvbl1 RuvB-like protein 1 JBrowse link 6 88,465,409 88,497,566 RGD:2290270
G Ruvbl2 RuvB-like protein 2 JBrowse link 7 45,421,896 45,436,171 RGD:2290270
G Tfpt TCF3 (E2A) fusion partner JBrowse link 7 3,620,324 3,629,929 RGD:2290270
G Uchl5 ubiquitin carboxyl-terminal esterase L5 JBrowse link 1 143,777,234 143,807,466 RGD:2290270
G Yy1 YY1 transcription factor JBrowse link 12 108,792,945 108,820,148 RGD:2290270
ISWI-type complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cecr2 CECR2, histone acetyl-lysine reader JBrowse link 6 120,666,314 120,771,191 RGD:2290270
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 JBrowse link 8 80,699,943 80,739,459 RGD:2290270
nBAF complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actl6b actin-like 6B JBrowse link 5 137,553,361 137,569,582 RGD:2290270
G Arid1a AT rich interactive domain 1A (SWI-like) JBrowse link 4 133,679,008 133,756,769 RGD:2290270
G Arid1b AT rich interactive domain 1B (SWI-like) JBrowse link 17 4,994,297 5,347,656 RGD:2290270
G Dpf1 D4, zinc and double PHD fingers family 1 JBrowse link 7 29,303,952 29,317,592 RGD:2290270
G Dpf2 D4, zinc and double PHD fingers family 2 JBrowse link 19 5,896,516 5,912,871 RGD:2290270
G Dpf3 D4, zinc and double PHD fingers, family 3 JBrowse link 12 83,213,751 83,487,736 RGD:2290270
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 JBrowse link 19 26,605,073 26,778,321 RGD:2290270
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 9 21,616,106 21,704,230 RGD:2290270
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 10 75,896,769 75,921,614 RGD:2290270
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 JBrowse link 9 110,132,024 110,240,178 RGD:2290270
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 JBrowse link 10 128,459,182 128,490,586 RGD:2290270
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 JBrowse link 15 99,702,287 99,713,995 RGD:2290270
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 JBrowse link 5 24,592,622 24,624,456 RGD:2290270
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 JBrowse link 11 99,209,047 99,231,017 RGD:2290270
G Ss18l1 SS18, nBAF chromatin remodeling complex subunit like 1 JBrowse link 2 180,042,483 180,070,201 RGD:2290270
npBAF complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actl6a actin-like 6A JBrowse link 3 32,708,546 32,726,973 RGD:2290270
G Arid1a AT rich interactive domain 1A (SWI-like) JBrowse link 4 133,679,008 133,756,769 RGD:2290270
G Phf10 PHD finger protein 10 JBrowse link 17 14,944,994 14,961,260 RGD:2290270
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 JBrowse link 19 26,605,073 26,778,321 RGD:2290270
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 9 21,616,106 21,704,230 RGD:2290270
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 10 75,896,769 75,921,614 RGD:2290270
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 JBrowse link 9 110,132,024 110,240,178 RGD:2290270
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 JBrowse link 10 128,459,182 128,490,586 RGD:2290270
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 JBrowse link 15 99,702,287 99,713,995 RGD:2290270
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 JBrowse link 5 24,592,622 24,624,456 RGD:2290270
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 JBrowse link 11 99,209,047 99,231,017 RGD:2290270
G Ss18 SS18, nBAF chromatin remodeling complex subunit JBrowse link 18 14,625,629 14,684,419 RGD:2290270
nuclear chromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akap8 A kinase (PRKA) anchor protein 8 JBrowse link 17 32,303,672 32,321,238 RGD:2290270
G Aptx aprataxin JBrowse link 4 40,682,078 40,721,667 RGD:2290270
G Ar androgen receptor JBrowse link X 98,148,757 98,323,218 RGD:2290270
G Arid1a AT rich interactive domain 1A (SWI-like) JBrowse link 4 133,679,008 133,756,769 RGD:2290270
G Asf1a anti-silencing function 1A histone chaperone JBrowse link 10 53,596,961 53,609,225 RGD:2290270
G Asf1b anti-silencing function 1B histone chaperone JBrowse link 8 83,955,694 83,970,195 RGD:2290270
G Asxl1 additional sex combs like 1 JBrowse link 2 153,345,830 153,404,007 RGD:2290270
G Asxl2 additional sex combs like 2, transcriptional regulator JBrowse link 12 3,426,857 3,510,811 RGD:2290270
G Asxl3 additional sex combs like 3, transcriptional regulator JBrowse link 18 22,344,077 22,530,227 RGD:2290270
G Bptf bromodomain PHD finger transcription factor JBrowse link 11 107,033,081 107,132,147 RGD:2290270
G Brd4 bromodomain containing 4 JBrowse link 17 32,196,272 32,284,743 RGD:2290270
G Calcoco1 calcium binding and coiled coil domain 1 JBrowse link 15 102,706,777 102,722,178 RGD:2290270
G Cbx7 chromobox 7 JBrowse link 15 79,915,804 79,971,143 RGD:2290270
G Cbx8 chromobox 8 JBrowse link 11 119,036,303 119,040,913 RGD:2290270
G Ccar2 cell cycle activator and apoptosis regulator 2 JBrowse link 14 70,138,168 70,153,791 RGD:2290270
G Cdca5 cell division cycle associated 5 JBrowse link 19 6,085,097 6,091,773 RGD:2290270
G Cdk12 cyclin-dependent kinase 12 JBrowse link 11 98,202,433 98,281,101 RGD:2290270
G Cdk13 cyclin-dependent kinase 13 JBrowse link 13 17,711,676 17,805,212 RGD:2290270
G Cdk9 cyclin-dependent kinase 9 (CDC2-related kinase) JBrowse link 2 32,705,782 32,712,784 RGD:2290270
G Cebpb CCAAT/enhancer binding protein (C/EBP), beta JBrowse link 2 167,688,915 167,690,432 RGD:2290270
G Chaf1a chromatin assembly factor 1, subunit A (p150) JBrowse link 17 56,040,416 56,068,026 RGD:2290270
G Chaf1b chromatin assembly factor 1, subunit B (p60) JBrowse link 16 93,883,900 93,906,115 RGD:2290270
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 10 17,723,228 17,725,674 RGD:2290270
G Cops9 COP9 signalosome subunit 9 JBrowse link 1 92,637,145 92,641,985 RGD:2290270
G Creb1 cAMP responsive element binding protein 1 JBrowse link 1 64,532,794 64,604,548 RGD:2290270
G Creb3l1 cAMP responsive element binding protein 3-like 1 JBrowse link 2 91,982,328 92,024,170 RGD:2290270
G Crebbp CREB binding protein JBrowse link 16 4,081,334 4,213,957 RGD:2290270
G Ctdspl2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 JBrowse link 2 121,955,398 122,015,326 RGD:2290270
G Ddx11 DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 JBrowse link 17 66,123,513 66,152,174 RGD:2290270
G Dffa DNA fragmentation factor, alpha subunit JBrowse link 4 149,104,142 149,120,653 RGD:2290270
G Dffb DNA fragmentation factor, beta subunit JBrowse link 4 153,964,447 153,975,121 RGD:2290270
G Dlx5 distal-less homeobox 5 JBrowse link 6 6,877,801 6,882,068 RGD:2290270
G Dntt deoxynucleotidyltransferase, terminal JBrowse link 19 41,029,275 41,059,525 RGD:2290270
G Dpf1 D4, zinc and double PHD fingers family 1 JBrowse link 7 29,303,952 29,317,592 RGD:2290270
G Dpf2 D4, zinc and double PHD fingers family 2 JBrowse link 19 5,896,516 5,912,871 RGD:2290270
G Dpf3 D4, zinc and double PHD fingers, family 3 JBrowse link 12 83,213,751 83,487,736 RGD:2290270
G Dvl3 dishevelled segment polarity protein 3 JBrowse link 16 20,516,949 20,534,013 RGD:2290270
G E2f1 E2F transcription factor 1 JBrowse link 2 154,559,400 154,569,892 RGD:2290270
G E2f4 E2F transcription factor 4 JBrowse link 8 105,297,663 105,305,370 RGD:2290270
G Egr1 early growth response 1 JBrowse link 18 34,861,207 34,864,956 RGD:2290270
G Ehmt2 euchromatic histone lysine N-methyltransferase 2 JBrowse link 17 34,898,463 34,914,073 RGD:2290270
G Eme1 essential meiotic structure-specific endonuclease 1 JBrowse link 11 94,644,972 94,653,836 RGD:2290270
G Eme2 essential meiotic structure-specific endonuclease subunit 2 JBrowse link 17 24,892,152 24,895,087 RGD:2290270
G Enc1 ectodermal-neural cortex 1 JBrowse link 13 97,241,105 97,253,040 RGD:2290270
G Eomes eomesodermin JBrowse link 9 118,478,186 118,486,132 RGD:2290270
G Esr1 estrogen receptor 1 (alpha) JBrowse link 10 4,611,989 5,005,633 RGD:2290270
G Etv3 ets variant 3 JBrowse link 3 87,525,577 87,540,158 RGD:2290270
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link 6 47,530,274 47,595,270 RGD:2290270
G Fer fer (fms/fps related) protein kinase JBrowse link 17 63,862,073 64,146,519 RGD:2290270
G Foxd3 forkhead box D3 JBrowse link 4 99,656,299 99,658,671 RGD:2290270
G Foxh1 forkhead box H1 JBrowse link 15 76,667,829 76,671,614 RGD:2290270
G Gabpa GA repeat binding protein, alpha JBrowse link 16 84,834,891 84,863,783 RGD:2290270
G Gata3 GATA binding protein 3 JBrowse link 2 9,857,078 9,887,953 RGD:2290270
G Gata4 GATA binding protein 4 JBrowse link 14 63,198,914 63,271,712 RGD:2290270
G Gata5 GATA binding protein 5 JBrowse link 2 180,325,088 180,335,503 RGD:2290270
G Gm12845 predicted gene 12845 JBrowse link 4 117,724,574 117,725,971 RGD:2290270
G H1f0 H1.0 linker histone JBrowse link 15 79,028,212 79,030,504 RGD:2290270
G H1f1 H1.1 linker histone, cluster member JBrowse link 13 23,763,668 23,764,412 RGD:2290270
G H1f2 H1.2 linker histone, cluster member JBrowse link 13 23,738,807 23,739,531 RGD:2290270
G H1f3 H1.3 linker histone, cluster member JBrowse link 13 23,555,032 23,555,807 RGD:2290270
G H1f4 H1.4 linker histone, cluster member JBrowse link 13 23,621,777 23,622,558 RGD:2290270
G H1f5 H1.5 linker histone, cluster member JBrowse link 13 21,779,832 21,780,625 RGD:2290270
G H1f6 H1.6 linker histone, cluster member JBrowse link 13 23,695,811 23,696,545 RGD:2290270
G H1f7 H1.7 linker histone JBrowse link 15 98,255,982 98,257,307 RGD:2290270
G H2ab1 H2A.B variant histone 1 JBrowse link X 117,014,757 117,015,104 RGD:2290270
G H2ab2 H2A.B variant histone 2 JBrowse link X 116,681,178 116,681,525 RGD:2290270
G H2ab3 H2A.B variant histone 3 JBrowse link X 120,312,582 120,313,226 RGD:2290270
G H2ac1 H2A clustered histone 1 JBrowse link 13 23,934,437 23,934,913 RGD:2290270
G H2ac10 H2A clustered histone 10 JBrowse link 13 23,533,875 23,534,378 RGD:2290270
G H2ac11 H2A clustered histone 11 JBrowse link 13 22,042,478 22,042,949 RGD:2290270
G H2ac12 H2A clustered histone 12 JBrowse link 13 22,035,122 22,035,643 RGD:2290270
G H2ac13 H2A clustered histone 13 JBrowse link 13 21,716,412 21,716,859 RGD:2290270
G H2ac15 H2A clustered histone 15 JBrowse link 13 21,753,377 21,753,912 RGD:2290270
G H2ac19 H2A clustered histone 19 JBrowse link 3 96,239,779 96,240,374 RGD:2290270
G H2ac20 H2A clustered histone 20 JBrowse link 3 96,220,413 96,220,880 RGD:2290270
G H2ac21 H2A clustered histone 21 JBrowse link 3 96,219,885 96,220,354 RGD:2290270
G H2ac22 H2A clustered histone 22 JBrowse link 13 21,786,774 21,787,248 RGD:2290270
G H2ac23 H2A clustered histone 23 JBrowse link 13 21,810,367 21,810,918 RGD:2290270
G H2ac24 H2A clustered histone 24 JBrowse link 13 21,833,024 21,833,475 RGD:2290270
G H2ac4 H2A clustered histone 4 JBrowse link 13 23,751,088 23,751,592 RGD:2290270
G H2ac6 H2A clustered histone 6 JBrowse link 13 23,683,473 23,683,959 RGD:2290270
G H2ac7 H2A clustered histone 7 JBrowse link 13 23,574,381 23,574,915 RGD:2290270
G H2ac8 H2A clustered histone 8 JBrowse link 13 23,570,663 23,571,220 RGD:2290270
G H2aj H2J.A histone JBrowse link 6 136,808,248 136,810,074 RGD:2290270
G H2al1b H2A histone family member L1B JBrowse link X 11,302,432 11,302,921 RGD:2290270
G H2al1e H2A histone family member L1E JBrowse link X 11,311,934 11,312,427 RGD:2290270
G H2al1f H2A histone family member L1F JBrowse link X 11,315,158 11,315,475 RGD:2290270
G H2al1j H2A histone family member L1J JBrowse link X 11,327,822 11,328,151 RGD:2290270
G H2al1k H2A histone family member L1K JBrowse link X 9,350,599 9,351,137 RGD:2290270
G H2al1m H2A histone family member L1M JBrowse link X 9,283,764 9,284,288 RGD:2290270
G H2al1n H2A histone family member L1N JBrowse link X 14,211,148 14,211,657 RGD:2290270
G H2al1o H2A histone family member L1O JBrowse link X 9,571,960 9,572,391 RGD:2290270
G H2al2a H2A histone family member L2A JBrowse link 2 17,996,417 17,996,958 RGD:2290270
G H2al2b H2A histone family member L2B JBrowse link Y 2,720,339 2,720,674 RGD:2290270
G H2al3 H2A histone family member L3 JBrowse link X 9,849,703 9,850,252 RGD:2290270
G H2ap H2A.P histone JBrowse link X 9,846,947 9,847,500 RGD:2290270
G H2aw H2A.W histone JBrowse link 11 58,954,685 58,955,192 RGD:2290270
G H2ax H2A.X variant histone JBrowse link 9 44,334,715 44,336,077 RGD:2290270
G H2az1 H2A.Z variant histone 1 JBrowse link 3 137,864,487 137,866,922 RGD:2290270
G H2az2 H2A.Z histone variant 2 JBrowse link 11 6,427,226 6,444,511 RGD:2290270
G Hand2 heart and neural crest derivatives expressed 2 JBrowse link 8 57,320,983 57,324,517 RGD:2290270
G Hat1 histone aminotransferase 1 JBrowse link 2 71,389,260 71,441,622 RGD:2290270
G Hdac1 histone deacetylase 1 JBrowse link 4 129,516,104 129,542,646 RGD:2290270
G Hdac2 histone deacetylase 2 JBrowse link 10 36,974,297 37,001,889 RGD:2290270
G Hdac5 histone deacetylase 5 JBrowse link 11 102,195,747 102,230,172 RGD:2290270
G Hif1a hypoxia inducible factor 1, alpha subunit JBrowse link 12 73,901,324 73,947,554 RGD:2290270
G Hils1 histone H1-like protein in spermatids 1 JBrowse link 11 94,967,593 94,968,456 RGD:2290270
G Hira histone cell cycle regulator JBrowse link 16 18,876,750 18,970,309 RGD:2290270
G Hmgb1 high mobility group box 1 JBrowse link 5 149,046,702 149,053,057 RGD:2290270
G Hmgb2 high mobility group box 2 JBrowse link 8 57,511,843 57,515,999 RGD:2290270
G Hmgb3 high mobility group box 3 JBrowse link X 71,555,917 71,560,673 RGD:2290270
G Hmgb4 high-mobility group box 4 JBrowse link 4 128,260,212 128,260,895 RGD:2290270
G Hnrnpd heterogeneous nuclear ribonucleoprotein D JBrowse link 5 99,955,935 99,979,130 RGD:2290270
G Hnrnpk heterogeneous nuclear ribonucleoprotein K JBrowse link 13 58,391,132 58,403,343 RGD:2290270
G Ipo4 importin 4 JBrowse link 14 55,625,400 55,635,868 RGD:2290270
G Irf1 interferon regulatory factor 1 JBrowse link 11 53,769,854 53,778,374 RGD:2290270
G Jun jun proto-oncogene JBrowse link 4 95,049,036 95,052,222 RGD:2290270
G Junb jun B proto-oncogene JBrowse link 8 84,976,909 84,978,748 RGD:2290270
G Jund jun D proto-oncogene JBrowse link 8 70,697,739 70,700,616 RGD:2290270
G Kat2a K(lysine) acetyltransferase 2A JBrowse link 11 100,704,746 100,712,485 RGD:2290270
G Kat2b K(lysine) acetyltransferase 2B JBrowse link 17 53,566,774 53,672,721 RGD:2290270
G Kat5 K(lysine) acetyltransferase 5 JBrowse link 19 5,603,014 5,611,556 RGD:2290270
G Kat6a K(lysine) acetyltransferase 6A JBrowse link 8 22,859,442 22,943,259 RGD:2290270
G Kat6b K(lysine) acetyltransferase 6B JBrowse link 14 21,499,216 21,672,478 RGD:2290270
G Kat7 K(lysine) acetyltransferase 7 JBrowse link 11 95,271,853 95,310,246 RGD:2290270
G Kat8 K(lysine) acetyltransferase 8 JBrowse link 7 127,912,517 127,925,838 RGD:2290270
G Kdm1a lysine (K)-specific demethylase 1A JBrowse link 4 136,550,533 136,602,787 RGD:2290270
G Kdm1b lysine (K)-specific demethylase 1B JBrowse link 13 47,043,373 47,085,279 RGD:2290270
G Kdm2a lysine (K)-specific demethylase 2A JBrowse link 19 4,316,144 4,398,721 RGD:2290270
G Kdm4c lysine (K)-specific demethylase 4C JBrowse link 4 74,242,497 74,405,864 RGD:2290270
G Kdm6a lysine (K)-specific demethylase 6A JBrowse link X 18,160,862 18,279,936 RGD:2290270
G Kdm6b KDM1 lysine (K)-specific demethylase 6B JBrowse link 11 69,398,508 69,420,367 RGD:2290270
G Klf1 Kruppel-like factor 1 (erythroid) JBrowse link 8 84,901,982 84,905,291 RGD:2290270
G Klf2 Kruppel-like factor 2 (lung) JBrowse link 8 72,319,062 72,321,654 RGD:2290270
G Klf4 Kruppel-like factor 4 (gut) JBrowse link 4 55,527,137 55,532,475 RGD:2290270
G Klhdc3 kelch domain containing 3 JBrowse link 17 46,674,550 46,680,930 RGD:2290270
G Ldb1 LIM domain binding 1 JBrowse link 19 46,031,525 46,048,145 RGD:2290270
G Macroh2a1 macroH2A.1 histone JBrowse link 13 56,073,622 56,135,626 RGD:2290270
G Macroh2a2 macroH2A.2 histone JBrowse link 10 61,738,640 61,784,604 RGD:2290270
G Max Max protein JBrowse link 12 76,937,269 76,962,323 RGD:2290270
G Mbd1 methyl-CpG binding domain protein 1 JBrowse link 18 74,267,605 74,282,737 RGD:2290270
G Mbd2 methyl-CpG binding domain protein 2 JBrowse link 18 70,568,225 70,629,134 RGD:2290270
G Mcmbp minichromosome maintenance complex binding protein JBrowse link 7 128,696,441 128,740,429 RGD:2290270
G Mecp2 methyl CpG binding protein 2 JBrowse link X 74,026,592 74,085,690 RGD:2290270
G Mef2a myocyte enhancer factor 2A JBrowse link 7 67,231,163 67,376,456 RGD:2290270
G Mef2b myocyte enhancer factor 2B JBrowse link 8 70,152,761 70,167,488 RGD:2290270
G Mef2c myocyte enhancer factor 2C JBrowse link 13 83,504,017 83,667,079 RGD:2290270
G Mef2d myocyte enhancer factor 2D JBrowse link 3 88,141,941 88,172,091 RGD:2290270
G Men1 multiple endocrine neoplasia 1 JBrowse link 19 6,334,979 6,340,894 RGD:2290270
G Mixl1 Mix1 homeobox-like 1 (Xenopus laevis) JBrowse link 1 180,693,043 180,697,034 RGD:2290270
G Mre11a MRE11A homolog A, double strand break repair nuclease JBrowse link 9 14,784,654 14,837,125 RGD:2290270
G Msh6 mutS homolog 6 JBrowse link 17 87,975,050 87,990,892 RGD:2290270
G Mxd1 MAX dimerization protein 1 JBrowse link 6 86,647,044 86,669,234 RGD:2290270
G Myc myelocytomatosis oncogene JBrowse link 15 61,985,341 61,990,361 RGD:2290270
G Myocd myocardin JBrowse link 11 65,173,608 65,269,989 RGD:2290270
G Myod1 myogenic differentiation 1 JBrowse link 7 46,376,474 46,379,092 RGD:2290270
G Nacc2 nucleus accumbens associated 2, BEN and BTB (POZ) domain containing JBrowse link 2 26,055,535 26,122,811 RGD:2290270
G Nasp nuclear autoantigenic sperm protein (histone-binding) JBrowse link 4 116,601,052 116,628,676 RGD:2290270
G Ncoa1 nuclear receptor coactivator 1 JBrowse link 12 4,247,362 4,477,206 RGD:2290270
G Ncoa3 nuclear receptor coactivator 3 JBrowse link 2 165,992,616 166,073,242 RGD:2290270
G Ncor1 nuclear receptor co-repressor 1 JBrowse link 11 62,315,663 62,457,414 RGD:2290270
G Ncor2 nuclear receptor co-repressor 2 JBrowse link 5 125,017,153 125,179,238 RGD:2290270
G Nfatc1 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1 JBrowse link 18 80,606,205 80,713,071 RGD:2290270
G Nfatc2 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 JBrowse link 2 168,476,410 168,601,657 RGD:2290270
G Nipbl NIPBL cohesin loading factor JBrowse link 15 8,289,824 8,465,315 RGD:2290270
G Npm2 nucleophosmin/nucleoplasmin 2 JBrowse link 14 70,647,296 70,661,802 RGD:2290270
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 JBrowse link 11 98,767,932 98,775,377 RGD:2290270
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 JBrowse link 2 91,184,061 91,202,829 RGD:2290270
G Nrip1 nuclear receptor interacting protein 1 JBrowse link 16 76,287,403 76,373,827 RGD:2290270
G Nthl1 nth (endonuclease III)-like 1 (E.coli) JBrowse link 17 24,632,680 24,638,838 RGD:2290270
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 JBrowse link 1 131,910,458 131,936,321 RGD:2290270
G Pawr PRKC, apoptosis, WT1, regulator JBrowse link 10 108,332,189 108,414,391 RGD:2290270
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:2290270
G Pcgf2 polycomb group ring finger 2 JBrowse link 11 97,688,821 97,702,434 RGD:2290270
G Phf10 PHD finger protein 10 JBrowse link 17 14,944,994 14,961,260 RGD:2290270
G Phox2a paired-like homeobox 2a JBrowse link 7 101,818,313 101,822,726 RGD:2290270
G Phox2b paired-like homeobox 2b JBrowse link 5 67,094,397 67,099,126 RGD:2290270
G Plcb1 phospholipase C, beta 1 JBrowse link 2 134,786,164 135,475,258 RGD:2290270
G Pogz pogo transposable element with ZNF domain JBrowse link 3 94,822,989 94,883,577 RGD:2290270
G Polr3d polymerase (RNA) III (DNA directed) polypeptide D JBrowse link 14 70,438,748 70,443,471 RGD:2290270
G Polr3g polymerase (RNA) III (DNA directed) polypeptide G JBrowse link 13 81,673,837 81,711,013 RGD:2290270
G Polr3gl polymerase (RNA) III (DNA directed) polypeptide G like JBrowse link 3 96,577,872 96,594,181 RGD:2290270
G Pou4f1 POU domain, class 4, transcription factor 1 JBrowse link 14 104,461,675 104,468,118 RGD:2290270
G Pou5f1 POU domain, class 5, transcription factor 1 JBrowse link 17 35,506,032 35,510,777 RGD:2290270
G Ppard peroxisome proliferator activator receptor delta JBrowse link 17 28,232,754 28,301,469 RGD:2290270
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 JBrowse link 17 35,916,512 35,932,283 RGD:2290270
G Prdm10 PR domain containing 10 JBrowse link 9 31,276,110 31,381,731 RGD:2290270
G Psip1 PC4 and SFRS1 interacting protein 1 JBrowse link 4 83,455,680 83,486,463 RGD:2290270
G Pus1 pseudouridine synthase 1 JBrowse link 5 110,773,667 110,780,649 RGD:2290270
G Rad17 RAD17 checkpoint clamp loader component JBrowse link 13 100,617,164 100,651,061 RGD:2290270
G Rad50 RAD50 double strand break repair protein JBrowse link 11 53,649,519 53,707,319 RGD:2290270
G Rad51 RAD51 recombinase JBrowse link 2 119,112,814 119,136,073 RGD:2290270
G Rad51ap1 RAD51 associated protein 1 JBrowse link 6 126,923,415 126,939,621 RGD:2290270
G Rara retinoic acid receptor, alpha JBrowse link 11 98,927,800 98,974,942 RGD:2290270
G Rarg retinoic acid receptor, gamma JBrowse link 15 102,234,938 102,257,522 RGD:2290270
G Rbbp4 retinoblastoma binding protein 4, chromatin remodeling factor JBrowse link 4 129,307,100 129,335,370 RGD:2290270
G Rcc1 regulator of chromosome condensation 1 JBrowse link 4 132,331,919 132,345,750 RGD:2290270
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) JBrowse link 19 5,637,442 5,648,134 RGD:2290270
G Rfx3 regulatory factor X, 3 (influences HLA class II expression) JBrowse link 19 27,761,721 28,014,669 RGD:2290270
G Rif1 replication timing regulatory factor 1 JBrowse link 2 52,072,815 52,126,769 RGD:2290270
G Rsf1 remodeling and spacing factor 1 JBrowse link 7 97,579,870 97,692,782 RGD:2290270
G Runx2 runt related transcription factor 2 JBrowse link 17 44,495,987 44,814,797 RGD:2290270
G Runx3 runt related transcription factor 3 JBrowse link 4 135,120,645 135,177,990 RGD:2290270
G Rxra retinoid X receptor alpha JBrowse link 2 27,676,445 27,763,319 RGD:2290270
G Satb2 special AT-rich sequence binding protein 2 JBrowse link 1 56,793,981 56,981,190 RGD:2290270
G Scml2 Scm polycomb group protein like 2 JBrowse link X 161,082,525 161,258,218 RGD:2290270
G Setd1a SET domain containing 1A JBrowse link 7 127,777,389 127,800,122 RGD:2290270
G Setd3 SET domain containing 3 JBrowse link 12 108,106,431 108,179,345 RGD:2290270
G Setdb1 SET domain, bifurcated 1 JBrowse link 3 95,323,525 95,357,202 RGD:2290270
G Sirt1 sirtuin 1 JBrowse link 10 63,319,005 63,339,035 RGD:2290270
G Slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) JBrowse link 16 3,979,105 4,003,829 RGD:2290270
G Smad2 SMAD family member 2 JBrowse link 18 76,241,090 76,311,748 RGD:2290270
G Smad3 SMAD family member 3 JBrowse link 9 63,646,766 63,757,994 RGD:2290270
G Smad4 SMAD family member 4 JBrowse link 18 73,634,790 73,703,791 RGD:2290270
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 JBrowse link X 47,809,370 47,892,613 RGD:2290270
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 JBrowse link 19 26,605,073 26,778,321 RGD:2290270
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 9 21,616,106 21,704,230 RGD:2290270
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 JBrowse link 5 24,592,622 24,624,456 RGD:2290270
G Snai2 snail family zinc finger 2 JBrowse link 16 14,705,852 14,709,395 RGD:2290270
G Sox18 SRY (sex determining region Y)-box 18 JBrowse link 2 181,669,837 181,671,640 RGD:2290270
G Sp1 trans-acting transcription factor 1 JBrowse link 15 102,406,316 102,436,404 RGD:2290270
G Spi1 spleen focus forming virus (SFFV) proviral integration oncogene JBrowse link 2 91,082,368 91,115,759 RGD:2290270
G Srf serum response factor JBrowse link 17 46,546,838 46,558,267 RGD:2290270
G Ssrp1 structure specific recognition protein 1 JBrowse link 2 85,037,120 85,047,114 RGD:2290270
G Stat1 signal transducer and activator of transcription 1 JBrowse link 1 52,119,438 52,161,865 RGD:2290270
G Stat3 signal transducer and activator of transcription 3 JBrowse link 11 100,886,806 100,939,594 RGD:2290270
G Stat6 signal transducer and activator of transcription 6 JBrowse link 10 127,642,955 127,660,987 RGD:2290270
G T brachyury, T-box transcription factor T JBrowse link 17 8,434,423 8,442,496 RGD:2290270
G Taf1 TATA-box binding protein associated factor 1 JBrowse link X 101,527,572 101,601,789 RGD:2290270
G Taf4 TATA-box binding protein associated factor 4 JBrowse link 2 179,912,146 179,976,646 RGD:2290270
G Taf5 TATA-box binding protein associated factor 5 JBrowse link 19 47,067,748 47,083,479 RGD:2290270
G Tal1 T cell acute lymphocytic leukemia 1 JBrowse link 4 115,056,426 115,071,755 RGD:2290270
G Tbp TATA box binding protein JBrowse link 17 15,499,888 15,517,427 RGD:2290270
G Tbx19 T-box 19 JBrowse link 1 165,137,834 165,160,773 RGD:2290270
G Tbx6 T-box 6 JBrowse link 7 126,781,483 126,785,548 RGD:2290270
G Tcf12 transcription factor 12 JBrowse link 9 71,844,252 72,111,893 RGD:2290270
G Tcf3 transcription factor 3 JBrowse link 10 80,409,165 80,433,976 RGD:2290270
G Tcf4 transcription factor 4 JBrowse link 18 69,343,429 69,687,967 RGD:2290270
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box JBrowse link 19 55,741,797 55,933,659 RGD:2290270
G Thrb thyroid hormone receptor beta JBrowse link 14 17,659,225 18,040,097 RGD:2290270
G Timeless timeless circadian clock 1 JBrowse link 10 128,232,063 128,252,941 RGD:2290270
G Tipin timeless interacting protein JBrowse link 9 64,281,491 64,305,422 RGD:2290270
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:2290270
G Trp63 transformation related protein 63 JBrowse link 16 25,683,763 25,892,088 RGD:2290270
G Trps1 transcriptional repressor GATA binding 1 JBrowse link 15 50,654,757 50,890,631 RGD:2290270
G Ttc21b tetratricopeptide repeat domain 21B JBrowse link 2 66,183,787 66,256,674 RGD:2290270
G Ube2a ubiquitin-conjugating enzyme E2A JBrowse link X 36,874,295 36,884,222 RGD:2290270
G Ube2b ubiquitin-conjugating enzyme E2B JBrowse link 11 51,985,138 52,004,145 RGD:2290270
G Uhrf1 ubiquitin-like, containing PHD and RING finger domains, 1 JBrowse link 17 56,303,337 56,323,486 RGD:2290270
G Usf1 upstream transcription factor 1 JBrowse link 1 171,411,307 171,418,954 RGD:2290270
G Usp3 ubiquitin specific peptidase 3 JBrowse link 9 66,514,639 66,593,148 RGD:2290270
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked JBrowse link Y 1,085,187 1,245,773 RGD:2290270
G Wbp2 WW domain binding protein 2 JBrowse link 11 116,078,571 116,086,995 RGD:2290270
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 JBrowse link 7 24,546,699 24,573,438 RGD:2290270
G Yy1 YY1 transcription factor JBrowse link 12 108,792,945 108,820,148 RGD:2290270
G Yy2 Yy2 transcription factor JBrowse link X 157,566,119 157,568,985 RGD:2290270
G Zeb2 zinc finger E-box binding homeobox 2 JBrowse link 2 44,983,512 45,117,442 RGD:2290270
G Zfp143 zinc finger protein 143 JBrowse link 7 110,061,670 110,095,396 RGD:2290270
G Zfp385a zinc finger protein 385A JBrowse link 15 103,313,895 103,340,086 RGD:2290270
G Zfp42 zinc finger protein 42 JBrowse link 8 43,295,067 43,307,009 RGD:2290270
nuclear euchromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alkbh1 alkB homolog 1, histone H2A dioxygenase JBrowse link 12 87,428,077 87,443,839 RGD:2290270
G Ash2l ASH2 like histone lysine methyltransferase complex subunit JBrowse link 8 25,816,000 25,847,694 RGD:2290270
G Cbx3 chromobox 3 JBrowse link 6 51,470,154 51,483,704 RGD:2290270
G Cecr2 CECR2, histone acetyl-lysine reader JBrowse link 6 120,666,314 120,771,191 RGD:2290270
G Creb1 cAMP responsive element binding protein 1 JBrowse link 1 64,532,794 64,604,548 RGD:2290270
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:2290270
G H1f0 H1.0 linker histone JBrowse link 15 79,028,212 79,030,504 RGD:2290270
G H1f1 H1.1 linker histone, cluster member JBrowse link 13 23,763,668 23,764,412 RGD:2290270
G H1f2 H1.2 linker histone, cluster member JBrowse link 13 23,738,807 23,739,531 RGD:2290270
G H1f3 H1.3 linker histone, cluster member JBrowse link 13 23,555,032 23,555,807 RGD:2290270
G H1f4 H1.4 linker histone, cluster member JBrowse link 13 23,621,777 23,622,558 RGD:2290270
G H1f5 H1.5 linker histone, cluster member JBrowse link 13 21,779,832 21,780,625 RGD:2290270
G H1f6 H1.6 linker histone, cluster member JBrowse link 13 23,695,811 23,696,545 RGD:2290270
G H2az1 H2A.Z variant histone 1 JBrowse link 3 137,864,487 137,866,922 RGD:2290270
G Hils1 histone H1-like protein in spermatids 1 JBrowse link 11 94,967,593 94,968,456 RGD:2290270
G Jun jun proto-oncogene JBrowse link 4 95,049,036 95,052,222 RGD:2290270
G Klf4 Kruppel-like factor 4 (gut) JBrowse link 4 55,527,137 55,532,475 RGD:2290270
G Myc myelocytomatosis oncogene JBrowse link 15 61,985,341 61,990,361 RGD:2290270
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 JBrowse link 10 89,454,234 89,533,645 RGD:2290270
G Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor JBrowse link 2 25,054,361 25,062,881 RGD:2290270
G Polr2a polymerase (RNA) II (DNA directed) polypeptide A JBrowse link 11 69,733,997 69,758,633 RGD:2290270
G Pou4f2 POU domain, class 4, transcription factor 2 JBrowse link 8 78,433,009 78,436,647 RGD:2290270
G Ppargc1a peroxisome proliferative activated receptor, gamma, coactivator 1 alpha JBrowse link 5 51,454,249 52,115,853 RGD:2290270
G Prdx1 peroxiredoxin 1 JBrowse link 4 116,685,599 116,700,000 RGD:2290270
G Rbmx RNA binding motif protein, X chromosome JBrowse link X 57,383,348 57,393,046 RGD:2290270
G Ruvbl2 RuvB-like protein 2 JBrowse link 7 45,421,896 45,436,171 RGD:2290270
G Setd1a SET domain containing 1A JBrowse link 7 127,777,389 127,800,122 RGD:2290270
G Setd5 SET domain containing 5 JBrowse link 6 113,077,262 113,153,432 RGD:2290270
G Sirt1 sirtuin 1 JBrowse link 10 63,319,005 63,339,035 RGD:2290270
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 9 21,616,106 21,704,230 RGD:2290270
G Sp1 trans-acting transcription factor 1 JBrowse link 15 102,406,316 102,436,404 RGD:2290270
G Tbp TATA box binding protein JBrowse link 17 15,499,888 15,517,427 RGD:2290270
G Tcf7 transcription factor 7, T cell specific JBrowse link 11 52,246,527 52,283,383 RGD:2290270
G Trim24 tripartite motif-containing 24 JBrowse link 6 37,870,811 37,968,445 RGD:2290270
G Trim28 tripartite motif-containing 28 JBrowse link 7 13,024,152 13,031,032 RGD:2290270
G Trnp1 TMF1-regulated nuclear protein 1 JBrowse link 4 133,491,097 133,499,645 RGD:2290270
nuclear heterochromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A1cf APOBEC1 complementation factor JBrowse link 19 31,868,756 31,952,365 RGD:2290270
G Aldoa aldolase A, fructose-bisphosphate JBrowse link 7 126,795,234 126,800,994 RGD:2290270
G Bend3 BEN domain containing 3 JBrowse link 10 43,479,134 43,515,417 RGD:2290270
G Cbx3 chromobox 3 JBrowse link 6 51,470,154 51,483,704 RGD:2290270
G Cbx5 chromobox 5 JBrowse link 15 103,191,546 103,239,904 RGD:2290270
G Dnmt3a DNA methyltransferase 3A JBrowse link 12 3,801,559 3,914,443 RGD:2290270
G Dnmt3b DNA methyltransferase 3B JBrowse link 2 153,649,411 153,687,730 RGD:2290270
G Dnmt3l DNA (cytosine-5-)-methyltransferase 3-like JBrowse link 10 78,042,287 78,063,622 RGD:2290270
G Eme1 essential meiotic structure-specific endonuclease 1 JBrowse link 11 94,644,972 94,653,836 RGD:2290270
G Foxc1 forkhead box C1 JBrowse link 13 31,806,646 31,810,635 RGD:2290270
G H2az1 H2A.Z variant histone 1 JBrowse link 3 137,864,487 137,866,922 RGD:2290270
G Igfbp3 insulin-like growth factor binding protein 3 JBrowse link 11 7,206,086 7,215,498 RGD:2290270
G Il33 interleukin 33 JBrowse link 19 29,925,113 29,960,718 RGD:2290270
G Kmt5c lysine methyltransferase 5C JBrowse link 7 4,740,092 4,747,514 RGD:2290270
G Mphosph8 M-phase phosphoprotein 8 JBrowse link 14 56,668,235 56,697,430 RGD:2290270
G Psip1 PC4 and SFRS1 interacting protein 1 JBrowse link 4 83,455,680 83,486,463 RGD:2290270
G Satb1 special AT-rich sequence binding protein 1 JBrowse link 17 51,736,187 51,833,290 RGD:2290270
G Sirt1 sirtuin 1 JBrowse link 10 63,319,005 63,339,035 RGD:2290270
G Sirt2 sirtuin 2 JBrowse link 7 28,766,752 28,788,665 RGD:2290270
G Suv39h1 suppressor of variegation 3-9 1 JBrowse link X 8,061,171 8,074,760 RGD:2290270
G Suv39h2 suppressor of variegation 3-9 2 JBrowse link 2 3,455,815 3,474,986 RGD:2290270
G Tcp1 t-complex protein 1 JBrowse link 17 12,916,329 12,925,067 RGD:2290270
G Tnks1bp1 tankyrase 1 binding protein 1 JBrowse link 2 85,048,013 85,073,048 RGD:2290270
G Trim28 tripartite motif-containing 28 JBrowse link 7 13,024,152 13,031,032 RGD:2290270
G Uhrf1 ubiquitin-like, containing PHD and RING finger domains, 1 JBrowse link 17 56,303,337 56,323,486 RGD:2290270
G Uhrf2 ubiquitin-like, containing PHD and RING finger domains 2 JBrowse link 19 30,030,430 30,093,726 RGD:2290270
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor JBrowse link 15 97,854,427 97,908,296 RGD:2290270
G Zfp57 zinc finger protein 57 JBrowse link 17 37,001,163 37,010,729 RGD:2290270
nuclear nucleosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpa centromere protein A JBrowse link 5 30,666,877 30,674,837 RGD:2290270
G H1f4 H1.4 linker histone, cluster member JBrowse link 13 23,621,777 23,622,558 RGD:2290270
G H2ab1 H2A.B variant histone 1 JBrowse link X 117,014,757 117,015,104 RGD:2290270
G H2ab2 H2A.B variant histone 2 JBrowse link X 116,681,178 116,681,525 RGD:2290270
G H2ab3 H2A.B variant histone 3 JBrowse link X 120,312,582 120,313,226 RGD:2290270
G H2al2a H2A histone family member L2A JBrowse link 2 17,996,417 17,996,958 RGD:2290270
G H2aw H2A.W histone JBrowse link 11 58,954,685 58,955,192 RGD:2290270
G H2bc1 H2B clustered histone 1 JBrowse link 13 23,933,725 23,934,156 RGD:2290270
G H3c1 H3 clustered histone 1 JBrowse link 13 23,761,885 23,762,386 RGD:2290270
G H3c10 H3 clustered histone 10 JBrowse link 13 21,717,628 21,718,115 RGD:2290270
G H3c11 H3 clustered histone 11 JBrowse link 13 21,782,915 21,783,397 RGD:2290270
G H3c13 H3 clustered histone 13 JBrowse link 3 96,268,654 96,269,155 RGD:2290270
G H3c14 H3 clustered histone 14 JBrowse link 3 96,246,685 96,247,348 RGD:2290270
G H3c15 H3 clustered histone 15 JBrowse link 3 96,238,479 96,239,127 RGD:2290270
G H3c2 H3 clustered histone 2 JBrowse link 13 23,752,345 23,752,840 RGD:2290270
G H3c4 H3 clustered histone 4 JBrowse link 13 23,575,763 23,576,266 RGD:2290270
G H3c6 H3 clustered histone 6 JBrowse link 13 23,561,475 23,562,385 RGD:2290270
G H3c8 H3 clustered histone 8 JBrowse link 13 23,535,418 23,535,909 RGD:2290270
G H3f3a H3.3 histone A JBrowse link 1 180,802,560 180,813,605 RGD:2290270
G H3f3b H3.3 histone B JBrowse link 11 116,021,961 116,026,039 RGD:2290270
G H4c1 H4 clustered histone 1 JBrowse link 13 23,760,795 23,761,249 RGD:2290270
G H4c11 H4 clustered histone 11 JBrowse link 13 21,735,034 21,735,456 RGD:2290270
G H4c12 H4 clustered histone 12 JBrowse link 13 21,750,145 21,750,553 RGD:2290270
G H4c14 H4 clustered histone 14 JBrowse link 3 96,262,934 96,263,317 RGD:2290270
G H4c17 H4 clustered histone 17 JBrowse link 13 21,811,746 21,812,150 RGD:2290270
G H4c18 H4 clustered histone 18 JBrowse link 13 21,831,792 21,832,197 RGD:2290270
G H4c2 H4 clustered histone 2 JBrowse link 13 23,756,937 23,757,386 RGD:2290270
G H4c3 H4 clustered histone 3 JBrowse link 13 23,698,084 23,698,458 RGD:2290270
G H4c4 H4 clustered histone 4 JBrowse link 13 23,581,568 23,581,969 RGD:2290270
G H4c6 H4 clustered histone 6 JBrowse link 13 23,551,286 23,551,668 RGD:2290270
G H4c8 H4 clustered histone 8 JBrowse link 13 23,531,044 23,531,478 RGD:2290270
G H4c9 H4 clustered histone 9 JBrowse link 13 22,040,960 22,041,362 RGD:2290270
G H4f16 H4 histone 16 JBrowse link 6 136,803,993 136,804,431 RGD:2290270
G Irf4 interferon regulatory factor 4 JBrowse link 13 30,749,233 30,766,981 RGD:2290270
G Mphosph8 M-phase phosphoprotein 8 JBrowse link 14 56,668,235 56,697,430 RGD:2290270
G Tcf3 transcription factor 3 JBrowse link 10 80,409,165 80,433,976 RGD:2290270
G Tnp1 transition protein 1 JBrowse link 1 73,015,074 73,015,899 RGD:2290270
G Tnp2 transition protein 2 JBrowse link 16 10,787,935 10,788,655 RGD:2290270
nuclear pericentric heterochromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atrx ATRX, chromatin remodeler JBrowse link X 105,797,615 105,929,372 RGD:2290270
G Cbx3 chromobox 3 JBrowse link 6 51,470,154 51,483,704 RGD:2290270
G Cenpa centromere protein A JBrowse link 5 30,666,877 30,674,837 RGD:2290270
G Cenpb centromere protein B JBrowse link 2 131,177,289 131,180,067 RGD:2290270
G Cenpc1 centromere protein C1 JBrowse link 5 86,012,018 86,065,962 RGD:2290270
G Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 JBrowse link 14 65,819,027 65,833,969 RGD:2290270
G Ikzf1 IKAROS family zinc finger 1 JBrowse link 11 11,684,962 11,772,930 RGD:2290270
G Kdm4b lysine (K)-specific demethylase 4B JBrowse link 17 56,325,970 56,403,774 RGD:2290270
G Ncapd3 non-SMC condensin II complex, subunit D3 JBrowse link 9 27,030,169 27,096,522 RGD:2290270
nuclear subtelomeric heterochromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atrx ATRX, chromatin remodeler JBrowse link X 105,797,615 105,929,372 RGD:2290270
nuclear telomeric heterochromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sirt6 sirtuin 6 JBrowse link 10 81,621,786 81,627,792 RGD:2290270
G Sirt7 sirtuin 7 JBrowse link 11 120,618,371 120,625,014 RGD:2290270
nucleolus organizer region term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sirt7 sirtuin 7 JBrowse link 11 120,618,371 120,625,014 RGD:2290270
nucleosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpa centromere protein A JBrowse link 5 30,666,877 30,674,837 RGD:2290270
G Glyr1 glyoxylate reductase 1 homolog (Arabidopsis) JBrowse link 16 5,013,902 5,049,938 RGD:2290270
G H1f0 H1.0 linker histone JBrowse link 15 79,028,212 79,030,504 RGD:2290270
G H1f1 H1.1 linker histone, cluster member JBrowse link 13 23,763,668 23,764,412 RGD:2290270
G H1f2 H1.2 linker histone, cluster member JBrowse link 13 23,738,807 23,739,531 RGD:2290270
G H1f3 H1.3 linker histone, cluster member JBrowse link 13 23,555,032 23,555,807 RGD:2290270
G H1f4 H1.4 linker histone, cluster member JBrowse link 13 23,621,777 23,622,558 RGD:2290270
G H1f5 H1.5 linker histone, cluster member JBrowse link 13 21,779,832 21,780,625 RGD:2290270
G H1f6 H1.6 linker histone, cluster member JBrowse link 13 23,695,811 23,696,545 RGD:2290270
G H1f8 H1.8 linker histone JBrowse link 6 115,944,931 115,950,242 RGD:2290270
G H2ac10 H2A clustered histone 10 JBrowse link 13 23,533,875 23,534,378 RGD:2290270
G H2ac12 H2A clustered histone 12 JBrowse link 13 22,035,122 22,035,643 RGD:2290270
G H2ac15 H2A clustered histone 15 JBrowse link 13 21,753,377 21,753,912 RGD:2290270
G H2ac20 H2A clustered histone 20 JBrowse link 3 96,220,413 96,220,880 RGD:2290270
G H2ac21 H2A clustered histone 21 JBrowse link 3 96,219,885 96,220,354 RGD:2290270
G H2aj H2J.A histone JBrowse link 6 136,808,248 136,810,074 RGD:2290270
G H2al1a H2A histone family member L1A JBrowse link X 11,299,257 11,299,757 RGD:2290270
G H2al1c H2A histone family member L1C JBrowse link X 11,305,655 11,305,972 RGD:2290270
G H2al1d H2A histone family member L1D JBrowse link X 11,308,824 11,309,141 RGD:2290270
G H2al1f H2A histone family member L1F JBrowse link X 11,315,158 11,315,475 RGD:2290270
G H2al1g H2A histone family member L1G JBrowse link X 11,318,256 11,318,764 RGD:2290270
G H2al1h H2A histone family member L1H JBrowse link X 11,321,453 11,321,894 RGD:2290270
G H2al1i H2A histone family member L1I JBrowse link X 11,324,659 11,324,976 RGD:2290270
G H2al2a H2A histone family member L2A JBrowse link 2 17,996,417 17,996,958 RGD:2290270
G H2ap H2A.P histone JBrowse link X 9,846,947 9,847,500 RGD:2290270
G H2aw H2A.W histone JBrowse link 11 58,954,685 58,955,192 RGD:2290270
G H2ax H2A.X variant histone JBrowse link 9 44,334,715 44,336,077 RGD:2290270
G H2az1 H2A.Z variant histone 1 JBrowse link 3 137,864,487 137,866,922 RGD:2290270
G H2az2 H2A.Z histone variant 2 JBrowse link 11 6,427,226 6,444,511 RGD:2290270
G H2bc1 H2B clustered histone 1 JBrowse link 13 23,933,725 23,934,156 RGD:2290270
G H2bc12 H2B clustered histone 12 JBrowse link 13 22,035,821 22,036,320 RGD:2290270
G H2bc14 H2B clustered histone 14 JBrowse link 13 21,722,044 21,722,526 RGD:2290270
G H2bc21 H2B clustered histone 21 JBrowse link 3 96,221,072 96,223,738 RGD:2290270
G H2bc22 H2B clustered histone 22 JBrowse link 13 21,787,483 21,801,561 RGD:2290270
G H2bc3 H2B clustered histone 3 JBrowse link 13 23,746,734 23,747,223 RGD:2290270
G H2bc9 H2B clustered histone 9 JBrowse link 13 23,542,923 23,543,444 RGD:2290270
G H2bl1 H2B.L histone variant 1 JBrowse link 13 98,984,090 98,984,565 RGD:2290270
G H2bu2 H2B.U histone 2 JBrowse link 11 58,948,911 58,949,372 RGD:2290270
G H3c1 H3 clustered histone 1 JBrowse link 13 23,761,885 23,762,386 RGD:2290270
G H3c10 H3 clustered histone 10 JBrowse link 13 21,717,628 21,718,115 RGD:2290270
G H3c11 H3 clustered histone 11 JBrowse link 13 21,782,915 21,783,397 RGD:2290270
G H3c13 H3 clustered histone 13 JBrowse link 3 96,268,654 96,269,155 RGD:2290270
G H3c14 H3 clustered histone 14 JBrowse link 3 96,246,685 96,247,348 RGD:2290270
G H3c15 H3 clustered histone 15 JBrowse link 3 96,238,479 96,239,127 RGD:2290270
G H3c2 H3 clustered histone 2 JBrowse link 13 23,752,345 23,752,840 RGD:2290270
G H3c3 H3 clustered histone 3 JBrowse link 13 23,745,042 23,745,521 RGD:2290270
G H3c4 H3 clustered histone 4 JBrowse link 13 23,575,763 23,576,266 RGD:2290270
G H3c6 H3 clustered histone 6 JBrowse link 13 23,561,475 23,562,385 RGD:2290270
G H3c7 H3 clustered histone 7 JBrowse link 13 23,544,052 23,544,954 RGD:2290270
G H3c8 H3 clustered histone 8 JBrowse link 13 23,535,418 23,535,909 RGD:2290270
G H3f3a H3.3 histone A JBrowse link 1 180,802,560 180,813,605 RGD:2290270
G H3f3b H3.3 histone B JBrowse link 11 116,021,961 116,026,039 RGD:2290270
G H3f3c H3 histone, family 3C JBrowse link 2 119,665,116 119,666,152 RGD:2290270
G H4c1 H4 clustered histone 1 JBrowse link 13 23,760,795 23,761,249 RGD:2290270
G H4c11 H4 clustered histone 11 JBrowse link 13 21,735,034 21,735,456 RGD:2290270
G H4c12 H4 clustered histone 12 JBrowse link 13 21,750,145 21,750,553 RGD:2290270
G H4c14 H4 clustered histone 14 JBrowse link 3 96,262,934 96,263,317 RGD:2290270
G H4c17 H4 clustered histone 17 JBrowse link 13 21,811,746 21,812,150 RGD:2290270
G H4c18 H4 clustered histone 18 JBrowse link 13 21,831,792 21,832,197 RGD:2290270
G H4c2 H4 clustered histone 2 JBrowse link 13 23,756,937 23,757,386 RGD:2290270
G H4c3 H4 clustered histone 3 JBrowse link 13 23,698,084 23,698,458 RGD:2290270
G H4c4 H4 clustered histone 4 JBrowse link 13 23,581,568 23,581,969 RGD:2290270
G H4c6 H4 clustered histone 6 JBrowse link 13 23,551,286 23,551,668 RGD:2290270
G H4c8 H4 clustered histone 8 JBrowse link 13 23,531,044 23,531,478 RGD:2290270
G H4c9 H4 clustered histone 9 JBrowse link 13 22,040,960 22,041,362 RGD:2290270
G H4f16 H4 histone 16 JBrowse link 6 136,803,993 136,804,431 RGD:2290270
G Hils1 histone H1-like protein in spermatids 1 JBrowse link 11 94,967,593 94,968,456 RGD:2290270
G Hp1bp3 heterochromatin protein 1, binding protein 3 JBrowse link 4 138,216,470 138,244,683 RGD:2290270
G Kat6a K(lysine) acetyltransferase 6A JBrowse link 8 22,859,442 22,943,259 RGD:2290270
G Kat6b K(lysine) acetyltransferase 6B JBrowse link 14 21,499,216 21,672,478 RGD:2290270
G Macroh2a1 macroH2A.1 histone JBrowse link 13 56,073,622 56,135,626 RGD:2290270
G Macroh2a2 macroH2A.2 histone JBrowse link 10 61,738,640 61,784,604 RGD:2290270
G Prm1 protamine 1 JBrowse link 16 10,796,332 10,796,823 RGD:2290270
G Prm2 protamine 2 JBrowse link 16 10,791,377 10,792,105 RGD:2290270
G Prm3 protamine 3 JBrowse link 16 10,790,508 10,790,914 RGD:2290270
G Shprh SNF2 histone linker PHD RING helicase JBrowse link 10 11,149,272 11,217,595 RGD:2290270
G Slf1 SMC5-SMC6 complex localization factor 1 JBrowse link 13 77,043,088 77,135,513 RGD:2290270
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 JBrowse link 17 80,393,752 80,480,453 RGD:2290270
G Sos2 SOS Ras/Rho guanine nucleotide exchange factor 2 JBrowse link 12 69,583,761 69,681,852 RGD:2290270
G Sphk2 sphingosine kinase 2 JBrowse link 7 45,709,463 45,718,002 RGD:2290270
G Tnp1 transition protein 1 JBrowse link 1 73,015,074 73,015,899 RGD:2290270
G Tnp2 transition protein 2 JBrowse link 16 10,787,935 10,788,655 RGD:2290270
NuRD complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chd3 chromodomain helicase DNA binding protein 3 JBrowse link 11 69,343,273 69,369,499 RGD:2290270
G Chd4 chromodomain helicase DNA binding protein 4 JBrowse link 6 125,095,980 125,130,591 RGD:2290270
G Chd5 chromodomain helicase DNA binding protein 5 JBrowse link 4 152,338,646 152,390,194 RGD:2290270
G Csnk2a1 casein kinase 2, alpha 1 polypeptide JBrowse link 2 152,226,535 152,281,856 RGD:2290270
G Gatad2a GATA zinc finger domain containing 2A JBrowse link 8 69,907,069 69,996,402 RGD:2290270
G Gatad2b GATA zinc finger domain containing 2B JBrowse link 3 90,293,161 90,363,405 RGD:2290270
G Hdac1 histone deacetylase 1 JBrowse link 4 129,516,104 129,542,646 RGD:2290270
G Hdac2 histone deacetylase 2 JBrowse link 10 36,974,297 37,001,889 RGD:2290270
G Mbd3 methyl-CpG binding domain protein 3 JBrowse link 10 80,392,539 80,399,531 RGD:2290270
G Mta1 metastasis associated 1 JBrowse link 12 113,098,248 113,137,206 RGD:2290270
G Mta2 metastasis-associated gene family, member 2 JBrowse link 19 8,941,920 8,952,300 RGD:2290270
G Mta3 metastasis associated 3 JBrowse link 17 83,706,163 83,823,715 RGD:2290270
G Rbbp4 retinoblastoma binding protein 4, chromatin remodeling factor JBrowse link 4 129,307,100 129,335,370 RGD:2290270
G Rbbp7 retinoblastoma binding protein 7, chromatin remodeling factor JBrowse link X 162,760,372 162,779,090 RGD:2290270
G Sall1 spalt like transcription factor 1 JBrowse link 8 89,027,242 89,044,162 RGD:2290270
G Zbtb7a zinc finger and BTB domain containing 7a JBrowse link 10 81,135,225 81,152,222 RGD:2290270
NURF complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G 0610010K14Rik RIKEN cDNA 0610010K14 gene JBrowse link 11 70,235,204 70,237,923 RGD:2290270
G Bptf bromodomain PHD finger transcription factor JBrowse link 11 107,033,081 107,132,147 RGD:2290270
G Hmgxb4 HMG box domain containing 4 JBrowse link 8 74,993,650 75,031,978 RGD:2290270
G Rbbp4 retinoblastoma binding protein 4, chromatin remodeling factor JBrowse link 4 129,307,100 129,335,370 RGD:2290270
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 JBrowse link X 47,809,370 47,892,613 RGD:2290270
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 JBrowse link 8 80,699,943 80,739,459 RGD:2290270
pericentric heterochromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atrx ATRX, chromatin remodeler JBrowse link X 105,797,615 105,929,372 RGD:2290270
G Baz1b bromodomain adjacent to zinc finger domain, 1B JBrowse link 5 135,187,323 135,246,131 RGD:2290270
G Cbx1 chromobox 1 JBrowse link 11 96,788,680 96,808,982 RGD:2290270
G Cbx5 chromobox 5 JBrowse link 15 103,191,546 103,239,904 RGD:2290270
G Cenpc1 centromere protein C1 JBrowse link 5 86,012,018 86,065,962 RGD:2290270
G Dnmt1 DNA methyltransferase (cytosine-5) 1 JBrowse link 9 20,907,206 20,959,888 RGD:2290270
G H2al1a H2A histone family member L1A JBrowse link X 11,299,257 11,299,757 RGD:2290270
G H2al2a H2A histone family member L2A JBrowse link 2 17,996,417 17,996,958 RGD:2290270
G Hells helicase, lymphoid specific JBrowse link 19 38,930,262 38,970,470 RGD:2290270
G Ikzf1 IKAROS family zinc finger 1 JBrowse link 11 11,684,962 11,772,930 RGD:2290270
G Incenp inner centromere protein JBrowse link 19 9,872,295 9,899,489 RGD:2290270
G Kdm4a lysine (K)-specific demethylase 4A JBrowse link 4 118,136,957 118,180,090 RGD:2290270
G Kdm4c lysine (K)-specific demethylase 4C JBrowse link 4 74,242,497 74,405,864 RGD:2290270
G Kdm4d lysine (K)-specific demethylase 4D JBrowse link 9 14,462,548 14,500,522 RGD:2290270
G Kmt5c lysine methyltransferase 5C JBrowse link 7 4,740,092 4,747,514 RGD:2290270
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 JBrowse link 5 136,123,066 136,136,074 RGD:2290270
G Macroh2a1 macroH2A.1 histone JBrowse link 13 56,073,622 56,135,626 RGD:2290270
G Snai1 snail family zinc finger 1 JBrowse link 2 167,538,195 167,542,814 RGD:2290270
perichromatin fibrils term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clock circadian locomotor output cycles kaput JBrowse link 5 76,209,868 76,305,603 RGD:2290270
G Cpsf6 cleavage and polyadenylation specific factor 6 JBrowse link 10 117,344,667 117,376,998 RGD:2290270
G Dhx9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 JBrowse link 1 153,455,756 153,487,688 RGD:2290270
G Nufip1 nuclear fragile X mental retardation protein interacting protein 1 JBrowse link 14 76,110,891 76,137,379 RGD:2290270
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 9 21,616,106 21,704,230 RGD:2290270
G Trim24 tripartite motif-containing 24 JBrowse link 6 37,870,811 37,968,445 RGD:2290270
rDNA heterochromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Baz2a bromodomain adjacent to zinc finger domain, 2A JBrowse link 10 128,091,370 128,129,303 RGD:2290270
G Nop53 NOP53 ribosome biogenesis factor JBrowse link 7 15,937,835 15,946,108 RGD:2290270
G Rrp8 ribosomal RNA processing 8, methyltransferase, homolog (yeast) JBrowse link 7 105,731,730 105,737,385 RGD:2290270
G Sirt1 sirtuin 1 JBrowse link 10 63,319,005 63,339,035 RGD:2290270
G Suv39h1 suppressor of variegation 3-9 1 JBrowse link X 8,061,171 8,074,760 RGD:2290270
RSC-type complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cphx1 cytoplasmic polyadenylated homeobox 1 JBrowse link 14 25,941,559 25,956,374 RGD:2290270
G Duxf3 double homeobox family member 3 JBrowse link 10 58,229,505 58,233,089 RGD:2290270
G En1 engrailed 1 JBrowse link 1 120,602,487 120,607,991 RGD:2290270
G En2 engrailed 2 JBrowse link 5 28,165,696 28,172,190 RGD:2290270
G Pbrm1 polybromo 1 JBrowse link 14 31,019,138 31,121,592 RGD:2290270
G Suz12 SUZ12 polycomb repressive complex 2 subunit JBrowse link 11 79,993,106 80,034,123 RGD:2290270
RSF complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rsf1 remodeling and spacing factor 1 JBrowse link 7 97,579,870 97,692,782 RGD:2290270
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 JBrowse link 8 80,699,943 80,739,459 RGD:2290270
senescence-associated heterochromatin focus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbx3 chromobox 3 JBrowse link 6 51,470,154 51,483,704 RGD:2290270
G Cdkn2a cyclin dependent kinase inhibitor 2A JBrowse link 4 89,274,473 89,294,619 RGD:2290270
G Hmga1 high mobility group AT-hook 1 JBrowse link 17 27,556,574 27,563,672 RGD:2290270
G Hmga1b high mobility group AT-hook 1B JBrowse link 11 120,762,794 120,764,392 RGD:2290270
sex chromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eed embryonic ectoderm development JBrowse link 7 89,954,654 89,980,976 RGD:2290270
G Pcgf2 polycomb group ring finger 2 JBrowse link 11 97,688,821 97,702,434 RGD:2290270
G Phc1 polyhomeotic 1 JBrowse link 6 122,317,731 122,340,227 RGD:2290270
G Ring1 ring finger protein 1 JBrowse link 17 34,020,792 34,024,680 RGD:2290270
G Rnf2 ring finger protein 2 JBrowse link 1 151,469,398 151,500,991 RGD:2290270
G Suz12 SUZ12 polycomb repressive complex 2 subunit JBrowse link 11 79,993,106 80,034,123 RGD:2290270
Sin3 complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csnk2a1 casein kinase 2, alpha 1 polypeptide JBrowse link 2 152,226,535 152,281,856 RGD:2290270
G Hdac1 histone deacetylase 1 JBrowse link 4 129,516,104 129,542,646 RGD:2290270
G Hdac2 histone deacetylase 2 JBrowse link 10 36,974,297 37,001,889 RGD:2290270
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 JBrowse link 10 30,832,359 30,842,783 RGD:2290270
G Ing2 inhibitor of growth family, member 2 JBrowse link 8 47,667,178 47,675,159 RGD:2290270
G Morf4l1 mortality factor 4 like 1 JBrowse link 9 90,091,669 90,114,820 RGD:2290270
G Ncor1 nuclear receptor co-repressor 1 JBrowse link 11 62,315,663 62,457,414 RGD:2290270
G Phf12 PHD finger protein 12 JBrowse link 11 77,982,733 78,030,539 RGD:2290270
G Sap30 sin3 associated polypeptide JBrowse link 8 57,482,702 57,487,860 RGD:2290270
G Sin3a transcriptional regulator, SIN3A (yeast) JBrowse link 9 57,071,991 57,128,368 RGD:2290270
G Sin3b transcriptional regulator, SIN3B (yeast) JBrowse link 8 72,723,270 72,758,203 RGD:2290270
G Sinhcaf SIN3-HDAC complex associated factor JBrowse link 6 148,921,057 148,946,470 RGD:2290270
G Suds3 suppressor of defective silencing 3 homolog (S. cerevisiae) JBrowse link 5 117,091,678 117,115,993 RGD:2290270
Sin3-type complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brms1 breast cancer metastasis-suppressor 1 JBrowse link 19 5,041,354 5,049,917 RGD:2290270
G Brms1l breast cancer metastasis-suppressor 1-like JBrowse link 12 55,836,324 55,869,736 RGD:2290270
G Hdac1 histone deacetylase 1 JBrowse link 4 129,516,104 129,542,646 RGD:2290270
G Hdac2 histone deacetylase 2 JBrowse link 10 36,974,297 37,001,889 RGD:2290270
G Phf12 PHD finger protein 12 JBrowse link 11 77,982,733 78,030,539 RGD:2290270
G Sap130 Sin3A associated protein JBrowse link 18 31,634,368 31,723,068 RGD:2290270
G Suds3 suppressor of defective silencing 3 homolog (S. cerevisiae) JBrowse link 5 117,091,678 117,115,993 RGD:2290270
SWI/SNF complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actl6a actin-like 6A JBrowse link 3 32,708,546 32,726,973 RGD:2290270
G Actl6b actin-like 6B JBrowse link 5 137,553,361 137,569,582 RGD:2290270
G Arid1a AT rich interactive domain 1A (SWI-like) JBrowse link 4 133,679,008 133,756,769 RGD:2290270
G Arid1b AT rich interactive domain 1B (SWI-like) JBrowse link 17 4,994,297 5,347,656 RGD:2290270
G Bicra BRD4 interacting chromatin remodeling complex associated protein JBrowse link 7 15,970,671 16,048,146 RGD:2290270
G Bicral BRD4 interacting chromatin remodeling complex associated protein like JBrowse link 17 46,798,116 46,890,442 RGD:2290270
G Brd9 bromodomain containing 9 JBrowse link 13 73,937,801 73,960,895 RGD:2290270
G Mpnd MPN domain containing JBrowse link 17 56,009,201 56,016,790 RGD:2290270
G Mysm1 myb-like, SWIRM and MPN domains 1 JBrowse link 4 94,942,037 94,979,155 RGD:2290270
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 JBrowse link 19 26,605,073 26,778,321 RGD:2290270
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 9 21,616,106 21,704,230 RGD:2290270
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 10 75,896,769 75,921,614 RGD:2290270
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 JBrowse link 9 110,132,024 110,240,178 RGD:2290270
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 JBrowse link 10 128,459,182 128,490,586 RGD:2290270
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 JBrowse link 15 99,702,287 99,713,995 RGD:2290270
G Smarcd2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 JBrowse link 11 106,263,171 106,272,998 RGD:2290270
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 JBrowse link 5 24,592,622 24,624,456 RGD:2290270
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 JBrowse link 11 99,209,047 99,231,017 RGD:2290270
G Ss18 SS18, nBAF chromatin remodeling complex subunit JBrowse link 18 14,625,629 14,684,419 RGD:2290270
SWI/SNF superfamily-type complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actl6a actin-like 6A JBrowse link 3 32,708,546 32,726,973 RGD:2290270
G Actl6b actin-like 6B JBrowse link 5 137,553,361 137,569,582 RGD:2290270
G Arid1a AT rich interactive domain 1A (SWI-like) JBrowse link 4 133,679,008 133,756,769 RGD:2290270
G Arid1b AT rich interactive domain 1B (SWI-like) JBrowse link 17 4,994,297 5,347,656 RGD:2290270
G Arid2 AT rich interactive domain 2 (ARID, RFX-like) JBrowse link 15 96,287,522 96,405,463 RGD:2290270
G Brd7 bromodomain containing 7 JBrowse link 8 88,329,894 88,362,252 RGD:2290270
G Dpf2 D4, zinc and double PHD fingers family 2 JBrowse link 19 5,896,516 5,912,871 RGD:2290270
G Pbrm1 polybromo 1 JBrowse link 14 31,019,138 31,121,592 RGD:2290270
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 JBrowse link 19 26,605,073 26,778,321 RGD:2290270
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link 9 21,616,106 21,704,230 RGD:2290270
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 10 75,896,769 75,921,614 RGD:2290270
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 JBrowse link 9 110,132,024 110,240,178 RGD:2290270
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 JBrowse link 10 128,459,182 128,490,586 RGD:2290270
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 JBrowse link 15 99,702,287 99,713,995 RGD:2290270
G Smarcd2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 JBrowse link 11 106,263,171 106,272,998 RGD:2290270
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 JBrowse link 5 24,592,622 24,624,456 RGD:2290270
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 JBrowse link 11 99,209,047 99,231,017 RGD:2290270
Swi5-Sfr1 complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sfr1 SWI5 dependent recombination repair 1 JBrowse link 19 47,731,714 47,735,588 RGD:2290270
G Swi5 SWI5 recombination repair homolog (yeast) JBrowse link 2 32,278,805 32,288,136 RGD:2290270
Swr1 complex term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actr6 ARP6 actin-related protein 6 JBrowse link 10 89,711,966 89,732,319 RGD:2290270
G Brd8 bromodomain containing 8 JBrowse link 18 34,598,611 34,624,863 RGD:2290270
G Dmap1 DNA methyltransferase 1-associated protein 1 JBrowse link 4 117,674,681 117,682,321 RGD:2290270
G Ep400 E1A binding protein p400 JBrowse link 5 110,664,373 110,770,927 RGD:2290270
G Ing3 inhibitor of growth family, member 3 JBrowse link 6 21,949,571 21,976,038 RGD:2290270
G Kat5 K(lysine) acetyltransferase 5 JBrowse link 19 5,603,014 5,611,556 RGD:2290270
G Ruvbl1 RuvB-like protein 1 JBrowse link 6 88,465,409 88,497,566 RGD:2290270
G Ruvbl2 RuvB-like protein 2 JBrowse link 7 45,421,896 45,436,171 RGD:2290270
G Srcap Snf2-related CREBBP activator protein JBrowse link 7 127,511,983 127,561,219 RGD:2290270
G Trrap transformation/transcription domain-associated protein JBrowse link 5 144,767,737 144,859,778 RGD:2290270
G Znhit1 zinc finger, HIT domain containing 1 JBrowse link 5 136,982,194 136,987,959 RGD:2290270
telomeric heterochromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atrx ATRX, chromatin remodeler JBrowse link X 105,797,615 105,929,372 RGD:2290270
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 JBrowse link 5 136,123,066 136,136,074 RGD:2290270
transcriptionally active chromatin term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aff4 AF4/FMR2 family, member 4 JBrowse link 11 53,350,640 53,421,830 RGD:2290270
G Bcas3 breast carcinoma amplified sequence 3 JBrowse link 11 85,353,110 85,826,058 RGD:2290270
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component JBrowse link 7 111,028,951 111,056,377 RGD:2290270
G Ell elongation factor RNA polymerase II JBrowse link 8 70,539,675 70,592,858 RGD:2290270
G Esr1 estrogen receptor 1 (alpha) JBrowse link 10 4,611,989 5,005,633 RGD:2290270
G Exosc10 exosome component 10 JBrowse link 4 148,558,419 148,582,401 RGD:2290270
G Exosc3 exosome component 3 JBrowse link 4 45,316,613 45,320,616 RGD:2290270
G Exosc4 exosome component 4 JBrowse link 15 76,327,397 76,330,670 RGD:2290270
G Exosc5 exosome component 5 JBrowse link 7 25,659,153 25,668,032 RGD:2290270
G H1f2 H1.2 linker histone, cluster member JBrowse link 13 23,738,807 23,739,531 RGD:2290270
G H2ab1 H2A.B variant histone 1 JBrowse link X 117,014,757 117,015,104 RGD:2290270
G H2ab2 H2A.B variant histone 2 JBrowse link X 116,681,178 116,681,525 RGD:2290270
G H2ab3 H2A.B variant histone 3 JBrowse link X 120,312,582 120,313,226 RGD:2290270
G Ice1 interactor of little elongation complex ELL subunit 1 JBrowse link 13 70,588,688 70,637,839 RGD:2290270
G Ice2 interactor of little elongation complex ELL subunit 2 JBrowse link 9 69,397,904 69,433,078 RGD:2290270
G Kmt2e lysine (K)-specific methyltransferase 2E JBrowse link 5 23,433,036 23,504,235 RGD:2290270
G Padi2 peptidyl arginine deiminase, type II JBrowse link 4 140,906,336 140,952,586 RGD:2290270
G Paf1 Paf1, RNA polymerase II complex component JBrowse link 7 28,392,996 28,399,383 RGD:2290270
G Pelp1 proline, glutamic acid and leucine rich protein 1 JBrowse link 11 70,392,881 70,410,031 RGD:2290270
G Psip1 PC4 and SFRS1 interacting protein 1 JBrowse link 4 83,455,680 83,486,463 RGD:2290270
G Supt6 SPT6, histone chaperone and transcription elongation factor JBrowse link 11 78,206,749 78,245,972 RGD:2290270
G Ttc37 tetratricopeptide repeat domain 37 JBrowse link 13 76,098,705 76,190,318 RGD:2290270
G Wdr61 WD repeat domain 61 JBrowse link 9 54,717,153 54,734,549 RGD:2290270
G Zc3h8 zinc finger CCCH type containing 8 JBrowse link 2 128,926,268 128,944,084 RGD:2290270

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23054
    cellular anatomical entity 18625
      chromatin 615
        CENP-A containing chromatin + 0
        cytoplasmic chromatin + 1
        euchromatin + 47
        heterochromatin + 96
        nuclear chromatin + 425
        nucleosome + 88
        transcriptionally active chromatin 24
        transcriptionally silent chromatin 0
Path 2
Term Annotations click to browse term
  cellular_component 23054
    cellular anatomical entity 18625
      organelle 12407
        non-membrane-bounded organelle 4234
          intracellular non-membrane-bounded organelle 4215
            chromosome 1149
              chromatin 615
                CENP-A containing chromatin + 0
                cytoplasmic chromatin + 1
                euchromatin + 47
                heterochromatin + 96
                nuclear chromatin + 425
                nucleosome + 88
                transcriptionally active chromatin 24
                transcriptionally silent chromatin 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.