Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:nuclear telomere cap complex
go back to main search page
Accession:GO:0000783 term browser browse the term
Definition:A complex of DNA and protein located at the end of a linear chromosome in the nucleus that protects and stabilizes a linear chromosome.
Comment:Note that this term can be used in place of the obsolete cellular component term 'telomere ; GO:0005696'. Use with caution because this term refers to a specific protein complex and not a region of the chromosome.


show annotations for term's descendants           Sort by:
 
nuclear telomere cap complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor ISO
IBA
(PMID:16880378)
PMID:21873635
(MGI:3829120|PMID:18185984)
RGD PMID:16880378 PMID:18185984, PMID:21873635 MGI:3829120, RGD:13792537 NCBI chr19:37,665,289...37,668,043
Ensembl chr19:37,665,296...37,667,987
JBrowse link
G Pot1 protection of telomeres 1 ISO
IBA
(PMID:16880378)
PMID:21873635
(MGI:3692019|PMID:17053789)
RGD PMID:16880378 PMID:17053789, PMID:21873635 MGI:3692019, RGD:13792537 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Pot1b protection of telomeres 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:7,845,697...7,902,270
Ensembl chr 9:7,845,845...7,891,514
JBrowse link
G Terf1 telomeric repeat binding factor 1 ISO
IBA
(PMID:16880378)
PMID:21873635
(MGI:77658|PMID:7502076)
RGD PMID:7502076 PMID:16880378, PMID:21873635 MGI:77658, RGD:13792537 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO (PMID:15181449), (PMID:16880378) RGD PMID:15181449 PMID:16880378 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 ISO (PMID:16880378) RGD PMID:16880378 NCBI chr15:34,358,697...34,365,085
Ensembl chr15:34,360,974...34,364,081
JBrowse link
CST complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctc1 CST telomere replication complex component 1 ISO
IBA
(PMID:19854130), (PMID:22763445)
(MGI:4441108|PMID:19854130)
PMID:21873635
RGD PMID:19854130 PMID:22763445, PMID:21873635 MGI:4441108, RGD:13792537 NCBI chr10:55,596,172...55,616,873
Ensembl chr10:55,596,148...55,616,889
JBrowse link
G Stn1 STN1 subunit of CST complex IEA
ISO
GO_REF:0000107
(MGI:4441108|PMID:19854130)
(PMID:19854130), (PMID:22763445)
Ensembl
RGD
PMID:19854130 PMID:22763445 GO_REF:0000107 MGI:4441108 NCBI chr 1:267,281,786...267,315,714
Ensembl chr 1:267,281,764...267,315,729
JBrowse link
G Ten1 TEN1 subunit of CST complex ISO
IBA
(PMID:19854130), (PMID:22763445)
PMID:21873635
(MGI:4441108|PMID:19854130)
RGD PMID:19854130 PMID:22763445, PMID:21873635 MGI:4441108, RGD:13792537 NCBI chr10:105,073,077...105,095,094
Ensembl chr10:105,073,077...105,095,094
JBrowse link
shelterin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor ISO
IBA
(PMID:15383534), (PMID:21852327), (PMID:23685356)
PMID:21873635
RGD PMID:15383534 PMID:21852327 PMID:23685356, PMID:21873635 RGD:13792537 NCBI chr19:37,665,289...37,668,043
Ensembl chr19:37,665,296...37,667,987
JBrowse link
G Pot1 protection of telomeres 1 ISO (PMID:15383534), (PMID:21852327), (PMID:23685356) RGD PMID:15383534 PMID:21852327 PMID:23685356 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 colocalizes_with ISO
IBA
(MGI:5704279|PMID:26548954)
PMID:21873635
RGD PMID:26548954, PMID:21873635 MGI:5704279, RGD:13792537 NCBI chr19:682,013...736,358
Ensembl chr19:682,065...736,315
JBrowse link
G Terf1 telomeric repeat binding factor 1 ISO (PMID:15383534), (PMID:21852327), (PMID:23685356) RGD PMID:15383534 PMID:21852327 PMID:23685356 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO
IBA
(PMID:15383534), (PMID:21852327), (PMID:23685356)
PMID:21873635
RGD PMID:15383534 PMID:21852327 PMID:23685356, PMID:21873635 RGD:13792537 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
G Terf2ip TERF2 interacting protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:44,231,317...44,238,406
Ensembl chr19:44,231,251...44,238,404
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 ISO
IBA
(PMID:15383534), (PMID:21852327), (PMID:23685356)
PMID:21873635
RGD PMID:15383534 PMID:21852327 PMID:23685356, PMID:21873635 RGD:13792537 NCBI chr15:34,358,697...34,365,085
Ensembl chr15:34,360,974...34,364,081
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20615
    protein-containing complex 6107
      nuclear protein-containing complex 1237
        nuclear telomere cap complex 11
          CST complex 3
          shelterin complex 7
Path 2
Term Annotations click to browse term
  cellular_component 20615
    cellular anatomical entity 20304
      intracellular anatomical structure 14641
        intracellular organelle 12408
          intracellular non-membrane-bounded organelle 5178
            chromosome 1421
              chromosomal region 291
                chromosome, telomeric region 112
                  chromosome, telomeric repeat region 11
                    telomere cap complex 11
                      nuclear telomere cap complex 11
                        CST complex 3
                        shelterin complex 7
paths to the root