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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome, telomeric region
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Accession:GO:0000781 term browser browse the term
Definition:The end of a linear chromosome, required for the integrity and maintenance of the end. A chromosome telomere usually includes a region of telomerase-encoded repeats the length of which rarely exceeds 20 bp each and that permits the formation of a telomeric loop (T-loop). The telomeric repeat region is usually preceded by a sub-telomeric region that is gene-poor but rich in repetitive elements. Some telomeres only consist of the latter part (for eg. D. melanogaster telomeres).
Comment:Note that this term can be used in place of the obsolete cellular component term 'telomere ; GO:0005696'. Use with caution because this term refers to a specific region of the chromosome and not a protein complex.
Synonyms:narrow_synonym: nuclear chromosome, telomere;   nuclear chromosome, telomeric region
 related_synonym: telomere
 alt_id: GO:0000784
 xref: SO:0000624


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chromosome, telomeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD shelterin complex subunit and telomerase recruitment factor located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624746:18,688,898...18,692,216
Ensembl chrNW_004624746:18,689,364...18,695,944
JBrowse link
G Alyref Aly/REF export factor located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624801:10,734,392...10,738,191
Ensembl chrNW_004624801:10,733,907...10,738,124
JBrowse link
G Atm ATM serine/threonine kinase located_in ISO (PMID:15149599) BHF-UCL PMID:15149599 NCBI chrNW_004624784:2,933,172...3,080,131
Ensembl chrNW_004624784:2,937,499...3,078,216
JBrowse link
G Blm BLM RecQ like helicase located_in ISO (PMID:26195664)
(PMID:10779560)
BHF-UCL
UniProt
PMID:10779560 PMID:26195664 NCBI chrNW_004624768:17,422,267...17,522,894
Ensembl chrNW_004624768:17,421,291...17,522,799
JBrowse link
G Brca2 BRCA2 DNA repair associated located_in ISO (PMID:21076401) BHF-UCL PMID:21076401 NCBI chrNW_004624776:5,497,552...5,573,465
Ensembl chrNW_004624776:5,497,779...5,550,993
JBrowse link
G Cbx1 chromobox 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:4,667,765...4,689,881
Ensembl chrNW_004624795:4,667,765...4,689,898
JBrowse link
G Cbx5 chromobox 5 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624904:2,273,054...2,313,723
Ensembl chrNW_004624904:2,276,036...2,296,706
JBrowse link
G Cdk2 cyclin dependent kinase 2 located_in ISO (PMID:17784788), (PMID:28031483), (PMID:30718482) MGI PMID:17784788 PMID:28031483 PMID:30718482 NCBI chrNW_004624802:12,076,443...12,082,608
Ensembl chrNW_004624802:12,076,443...12,082,630
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:3,285,086...3,318,939
Ensembl chrNW_004624860:3,283,837...3,318,985
JBrowse link
G Chek1 checkpoint kinase 1 located_in ISO (PMID:15149599) BHF-UCL PMID:15149599 NCBI chrNW_004624927:1,609,404...1,643,409
Ensembl chrNW_004624927:1,610,878...1,643,409
JBrowse link
G Chek2 checkpoint kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:5,035,045...5,072,555
Ensembl chrNW_004624747:5,035,200...5,070,332
JBrowse link
G Ctc1 CST telomere replication complex component 1 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624786:10,795,848...10,819,029
Ensembl chrNW_004624786:10,795,193...10,819,613
JBrowse link
G Dhx36 DEAH-box helicase 36 located_in ISO (PMID:20472641), (PMID:21846770) UniProt PMID:20472641 PMID:21846770 NCBI chrNW_004624730:31,857,157...31,913,985
Ensembl chrNW_004624730:31,855,992...31,914,253
JBrowse link
G Dmc1 DNA meiotic recombinase 1 located_in ISO (PMID:20336070) MGI PMID:20336070 NCBI chrNW_004624752:9,547,327...9,585,549
Ensembl chrNW_004624752:9,548,015...9,585,958
JBrowse link
G Dna2 DNA replication helicase/nuclease 2 located_in ISO (PMID:23604072) BHF-UCL PMID:23604072 NCBI chrNW_004624754:2,746,912...2,791,560
Ensembl chrNW_004624754:2,747,097...2,791,445
JBrowse link
G Eid3 EP300 interacting inhibitor of differentiation 3 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624750:4,478,753...4,482,276
Ensembl chrNW_004624750:4,478,911...4,479,872
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit located_in ISO (PMID:14690602) UniProt PMID:14690602 NCBI chrNW_004624907:2,288,380...2,298,909
Ensembl chrNW_004624907:2,288,423...2,298,373
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit located_in ISO (PMID:14690602) BHF-UCL PMID:14690602 NCBI chrNW_004624782:4,508,758...4,537,751
Ensembl chrNW_004624782:4,512,650...4,537,701
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit located_in ISO (PMID:9214638) ARUK-UCL PMID:9214638 NCBI chrNW_004624795:1,454,361...1,470,079 JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit located_in ISO (PMID:9214638) ARUK-UCL PMID:9214638 NCBI chrNW_004624800:6,781,848...6,874,221
Ensembl chrNW_004624800:6,802,901...6,874,196
JBrowse link
G Fen1 flap structure-specific endonuclease 1 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624926:608,874...613,487
Ensembl chrNW_004624926:608,874...612,995
JBrowse link
G Gar1 GAR1 ribonucleoprotein located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624830:94,929...102,170
Ensembl chrNW_004624830:94,090...102,155
JBrowse link
G Gatad2b GATA zinc finger domain containing 2B located_in ISO (PMID:25150861) UniProt PMID:25150861 NCBI chrNW_004624885:3,297,191...3,375,908
Ensembl chrNW_004624885:3,362,823...3,375,179
JBrowse link
G Hat1 histone acetyltransferase 1 located_in IEA GOC GO_REF:0000108 NCBI chrNW_004624787:9,343,124...9,402,630
Ensembl chrNW_004624787:9,346,741...9,403,700
JBrowse link
G Hdac2 histone deacetylase 2 located_in ISO (PMID:25150861) UniProt PMID:25150861 NCBI chrNW_004624856:4,834,197...4,861,546
Ensembl chrNW_004624856:4,834,217...4,861,592
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624772:9,579,488...9,658,881 JBrowse link
G Hmbox1 homeobox containing 1 located_in ISO (PMID:23685356) BHF-UCL PMID:23685356 NCBI chrNW_004624758:23,472,719...23,649,924
Ensembl chrNW_004624758:23,548,514...23,638,713
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 located_in ISO PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chrNW_004624739:4,343,164...4,353,123
Ensembl chrNW_004624739:4,343,246...4,352,066
JBrowse link
G Kash5 KASH domain containing 5 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:4,783,593...4,806,025
Ensembl chrNW_004624832:4,783,766...4,803,325
JBrowse link
G Kdm1a lysine demethylase 1A located_in ISO (PMID:24529708) BHF-UCL PMID:24529708 NCBI chrNW_004624764:7,664,550...7,742,494 JBrowse link
G LOC101698172 histone H3.3 located_in ISO (PMID:20110566) BHF-UCL PMID:20110566 NCBI chrNW_004624801:5,668,661...5,672,164 JBrowse link
G LOC101699418 histone H3.3 located_in ISO (PMID:20110566) BHF-UCL PMID:20110566 NCBI chrNW_004624807:194,372...203,205 JBrowse link
G LOC101701891 histone H2AX located_in ISO (PMID:15149599) BHF-UCL PMID:15149599 NCBI chrNW_004624784:14,475,813...14,477,269
Ensembl chrNW_004624784:14,476,730...14,477,161
JBrowse link
G LOC101707723 nibrin-like located_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624766:8,270,570...8,272,680 JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624772:6,713,224...6,733,841
Ensembl chrNW_004624772:6,713,055...6,733,608
JBrowse link
G Lrwd1 leucine rich repeats and WD repeat domain containing 1 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624740:15,174,170...15,181,341
Ensembl chrNW_004624740:15,174,259...15,181,191
JBrowse link
G Majin membrane anchored junction protein located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:21,423,114...21,468,909
Ensembl chrNW_004624767:21,423,175...21,468,227
JBrowse link
G Men1 menin 1 located_in ISO (PMID:12203793) BHF-UCL PMID:12203793 NCBI chrNW_004624767:21,579,084...21,585,380
Ensembl chrNW_004624767:21,579,103...21,585,373
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624735:39,095,559...39,153,936
Ensembl chrNW_004624735:39,092,781...39,153,920
JBrowse link
G Mta2 metastasis associated 1 family member 2 located_in ISO (PMID:25150861) UniProt PMID:25150861 NCBI chrNW_004624926:1,124,887...1,133,025
Ensembl chrNW_004624926:1,124,446...1,133,696
JBrowse link
G Nabp1 nucleic acid binding protein 1 located_in ISO (PMID:23459151) BHF-UCL PMID:23459151 NCBI chrNW_004624854:4,512,692...4,520,684 JBrowse link
G Nabp2 nucleic acid binding protein 2 located_in ISO (PMID:23459151)
(PMID:25589350)
BHF-UCL PMID:23459151 PMID:25589350 NCBI chrNW_004624802:11,774,237...11,780,822
Ensembl chrNW_004624802:11,774,237...11,780,250
JBrowse link
G Nbn nibrin is_active_in
located_in
ISO
IEA
(PMID:28216226) UniProt
UniProt
PMID:28216226 GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624744:2,013,936...2,061,726
Ensembl chrNW_004624744:2,013,922...2,061,708
JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624782:11,910,749...11,944,323
Ensembl chrNW_004624782:11,910,927...11,944,234
JBrowse link
G Nsmce2 NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase located_in ISO (PMID:17589526) UniProt PMID:17589526 NCBI chrNW_004624735:29,915,007...30,166,564
Ensembl chrNW_004624735:29,913,423...30,151,922
JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624737:24,706,292...24,724,616
Ensembl chrNW_004624737:24,706,321...24,725,351
JBrowse link
G Orc1 origin recognition complex subunit 1 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624859:833,360...863,631
Ensembl chrNW_004624859:833,793...863,539
JBrowse link
G Orc2 origin recognition complex subunit 2 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624889:224,658...269,815
Ensembl chrNW_004624889:227,510...268,784
JBrowse link
G Orc4 origin recognition complex subunit 4 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624866:626,556...716,725
Ensembl chrNW_004624866:622,859...716,787
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase located_in ISO (PMID:16522649) HGNC-UCL PMID:16522649 NCBI chrNW_004624781:7,821,125...7,838,189
Ensembl chrNW_004624781:7,821,683...7,827,692
JBrowse link
G Pinx1 PIN2 (TERF1) interacting telomerase inhibitor 1 located_in ISO (PMID:11701125), (PMID:19265708), (PMID:21119197), (PMID:24415760) BHF-UCL PMID:11701125 PMID:19265708 PMID:21119197 PMID:24415760 NCBI chrNW_004624758:24,589,990...24,666,355
Ensembl chrNW_004624758:24,589,743...24,666,598
JBrowse link
G Pml PML nuclear body scaffold located_in ISO (PMID:26119943) BHF-UCL PMID:26119943 NCBI chrNW_004624781:464,858...498,146
Ensembl chrNW_004624781:464,658...497,775
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624832:4,117,597...4,135,092
Ensembl chrNW_004624832:4,117,341...4,135,035
JBrowse link
G Polr2b RNA polymerase II subunit B located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624761:12,387,553...12,430,211
Ensembl chrNW_004624761:12,387,553...12,430,871
JBrowse link
G Pot1 protection of telomeres 1 located_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624783:11,138,222...11,223,329
Ensembl chrNW_004624783:11,138,303...11,223,044
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:19,120,683...19,123,935
Ensembl chrNW_004624767:19,119,883...19,123,934
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624738:10,689,395...10,730,171
Ensembl chrNW_004624738:10,689,152...10,730,171
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624747:21,191,165...21,212,521
Ensembl chrNW_004624747:21,191,150...21,213,544
JBrowse link
G Ppp1r10 protein phosphatase 1 regulatory subunit 10 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624754:25,074,980...25,091,798
Ensembl chrNW_004624754:25,076,333...25,091,907
JBrowse link
G Rad17 RAD17 checkpoint clamp loader component located_in ISO (PMID:15149599) BHF-UCL PMID:15149599 NCBI chrNW_004624905:244,811...277,362
Ensembl chrNW_004624905:249,511...276,922
JBrowse link
G Rad50 RAD50 double strand break repair protein located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624733:39,445,083...39,544,415
Ensembl chrNW_004624733:39,447,461...39,544,409
JBrowse link
G Rad51 RAD51 recombinase located_in ISO (PMID:21076401) BHF-UCL PMID:21076401 NCBI chrNW_004624804:7,957,175...7,983,078
Ensembl chrNW_004624804:7,957,253...7,983,619
JBrowse link
G Rad51d RAD51 paralog D located_in ISO (PMID:15109494) BHF-UCL PMID:15109494 NCBI chrNW_004624875:2,972,739...2,987,360
Ensembl chrNW_004624875:2,972,678...2,987,344
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor located_in ISO (PMID:30045876) UniProt PMID:30045876 NCBI chrNW_004624764:15,800,143...15,823,319 JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor located_in ISO (PMID:25150861) UniProt PMID:25150861 NCBI chrNW_004624829:1,544,781...1,567,301
Ensembl chrNW_004624829:1,544,788...1,567,425
JBrowse link
G Recql4 RecQ like helicase 4 located_in ISO (PMID:22039056) BHF-UCL PMID:22039056 NCBI chrNW_004624735:12,345,326...12,351,783
Ensembl chrNW_004624735:12,345,844...12,351,637
JBrowse link
G Rif1 replication timing regulatory factor 1 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624866:5,619,758...5,680,165 JBrowse link
G Rnf8 ring finger protein 8 located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000107 NCBI chrNW_004624754:20,683,133...20,714,469
Ensembl chrNW_004624754:20,679,867...20,714,522
JBrowse link
G Rpa2 replication protein A2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:11,737,234...11,763,862
Ensembl chrNW_004624764:11,736,129...11,764,080
JBrowse link
G Rpa4 replication protein A4 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624851:3,526,749...3,528,412 JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 located_in ISO (PMID:22579284) BHF-UCL PMID:22579284 NCBI chrNW_004624741:29,303,844...29,344,123
Ensembl chrNW_004624741:29,304,427...29,343,842
JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit located_in ISO (PMID:19596235), (PMID:24012755) ComplexPortal PMID:19596235 PMID:24012755 NCBI chrNW_004624824:1,398,258...1,423,652
Ensembl chrNW_004624824:1,395,434...1,420,622
JBrowse link
G Smc5 structural maintenance of chromosomes 5 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624736:2,697,764...2,803,501
Ensembl chrNW_004624736:2,700,161...2,803,439
JBrowse link
G Smc6 structural maintenance of chromosomes 6 located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624738:612,758...689,191
Ensembl chrNW_004624738:614,402...681,430
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624770:13,000,532...13,123,346
Ensembl chrNW_004624770:13,000,316...13,124,031
JBrowse link
G Smg6 SMG6 nonsense mediated mRNA decay factor located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624786:4,729,857...4,969,708
Ensembl chrNW_004624786:4,726,676...4,969,646
JBrowse link
G Spdya speedy/RINGO cell cycle regulator family member A located_in ISO (PMID:28031483), (PMID:30718482) MGI PMID:28031483 PMID:30718482 NCBI chrNW_004624738:10,742,668...10,790,243
Ensembl chrNW_004624738:10,742,667...10,790,176
JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks located_in ISO (PMID:20336070) MGI PMID:20336070 NCBI chrNW_004624741:23,784,362...23,800,127
Ensembl chrNW_004624741:23,784,298...23,800,168
JBrowse link
G Stn1 STN1 subunit of CST complex located_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624831:2,999,061...3,030,447
Ensembl chrNW_004624831:2,999,800...3,030,443
JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 located_in ISO (PMID:28031483) MGI PMID:28031483 NCBI chrNW_004624740:26,361,340...26,463,869
Ensembl chrNW_004624740:26,410,853...26,462,513
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 located_in ISO (PMID:17452644) MGI PMID:17452644 NCBI chrNW_004624752:9,396,860...9,414,345
Ensembl chrNW_004624752:9,396,860...9,415,462
JBrowse link
G Ten1 TEN1 subunit of CST complex located_in ISO (PMID:19854130) UniProt PMID:19854130 NCBI chrNW_004624801:5,867,474...5,900,298
Ensembl chrNW_004624801:5,880,221...5,900,121
JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 located_in ISO (PMID:24413433), (PMID:24885367), (PMID:26548954), (PMID:28031483) MGI PMID:24413433 PMID:24885367 PMID:26548954 PMID:28031483 NCBI chrNW_004624746:19,689,127...19,726,972
Ensembl chrNW_004624746:19,697,909...19,720,724
JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624731:14,203,324...14,220,899
Ensembl chrNW_004624731:14,203,928...14,221,213
JBrowse link
G Terf1 telomeric repeat binding factor 1 located_in IEA Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004624744:18,120,677...18,156,920
Ensembl chrNW_004624744:18,121,687...18,156,989
JBrowse link
G Terf2 telomeric repeat binding factor 2 is_active_in
located_in
ISO
IEA
(PMID:28216226) UniProt
UniProt
InterPro
PMID:28216226 GO_REF:0000002 GO_REF:0000043 GO_REF:0000044 GO_REF:0000104 NCBI chrNW_004624746:16,992,049...17,020,809
Ensembl chrNW_004624746:16,992,110...17,019,857
JBrowse link
G Terf2ip TERF2 interacting protein located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624746:11,327,473...11,337,489
Ensembl chrNW_004624746:11,327,467...11,337,496
JBrowse link
G Tert telomerase reverse transcriptase located_in IEA UniProt GO_REF:0000043 GO_REF:0000044 NCBI chrNW_004624751:624,569...647,198 JBrowse link
G Tfip11 tuftelin interacting protein 11 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:3,041,769...3,055,751
Ensembl chrNW_004624747:3,041,769...3,055,726
JBrowse link
G Thoc1 THO complex 1 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624770:10,771,785...10,811,287 JBrowse link
G Thoc2 THO complex 2 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624797:2,299,694...2,411,269 JBrowse link
G Thoc3 THO complex 3 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624733:14,005,563...14,022,516
Ensembl chrNW_004624733:14,005,501...14,023,617
JBrowse link
G Thoc5 THO complex subunit 5 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624747:5,840,862...5,874,350
Ensembl chrNW_004624747:5,840,862...5,874,334
JBrowse link
G Thoc6 THO complex subunit 6 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624824:764,185...772,426
Ensembl chrNW_004624824:768,082...774,688
Ensembl chrNW_004624824:768,082...774,688
JBrowse link
G Thoc7 THO complex subunit 7 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624888:2,044,660...2,062,468
Ensembl chrNW_004624888:2,045,490...2,062,861
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 located_in ISO (PMID:10581025), (PMID:12768206), (PMID:15133513), (PMID:15380063), (PMID:23685356), (PMID:24270157)
(PMID:12676566), (PMID:23685356)
BHF-UCL
MGI
PMID:10581025 PMID:12676566 PMID:12768206 PMID:15133513 PMID:15380063 More... NCBI chrNW_004624820:8,262,171...8,265,275
Ensembl chrNW_004624820:8,262,595...8,311,872
JBrowse link
G Tnks tankyrase located_in ISO (PMID:11739745), (PMID:9822378) UniProt PMID:9822378 PMID:11739745 NCBI chrNW_004624839:5,675,581...5,860,736
Ensembl chrNW_004624839:5,675,656...5,856,787
JBrowse link
G Tox4 TOX high mobility group box family member 4 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624825:7,493,911...7,511,852
Ensembl chrNW_004624825:7,493,953...7,511,846
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 located_in ISO (PMID:15149599)
(PMID:19001091)
BHF-UCL
MGI
PMID:15149599 PMID:19001091 NCBI chrNW_004624804:10,517,531...10,612,238
Ensembl chrNW_004624804:10,517,696...10,591,688
JBrowse link
G Upf1 UPF1 RNA helicase and ATPase located_in ISO (PMID:21829167) BHF-UCL PMID:21829167 NCBI chrNW_004624908:1,909,995...1,935,370
Ensembl chrNW_004624908:1,910,315...1,933,655
JBrowse link
G Wdr82 WD repeat domain 82 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624730:6,032,426...6,067,303 JBrowse link
G Wrn WRN RecQ like helicase located_in ISO (PMID:15200954), (PMID:26420422)
(PMID:26195664)
BHF-UCL PMID:15200954 PMID:26195664 PMID:26420422 NCBI chrNW_004624780:12,875,747...13,051,492
Ensembl chrNW_004624780:12,876,093...13,025,739
JBrowse link
G Wrnip1 WRN helicase interacting protein 1 located_in ISO (PMID:24270157) BHF-UCL PMID:24270157 NCBI chrNW_004624756:22,034,252...22,054,236
Ensembl chrNW_004624756:22,034,137...22,054,253
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624907:1,087,611...1,113,275
Ensembl chrNW_004624907:1,087,611...1,113,266
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 located_in ISO (PMID:14690602) BHF-UCL PMID:14690602 NCBI chrNW_004624743:3,299,329...3,549,182
Ensembl chrNW_004624743:3,317,351...3,552,161
JBrowse link
G Zbtb10 zinc finger and BTB domain containing 10 located_in ISO (PMID:30629181) ARUK-UCL PMID:30629181 NCBI chrNW_004624744:10,874,076...10,917,976
Ensembl chrNW_004624744:10,878,616...10,916,852
JBrowse link
G Zbtb48 zinc finger and BTB domain containing 48 located_in ISO (PMID:28082411), (PMID:28500257) UniProt PMID:28082411 PMID:28500257 NCBI chrNW_004624818:4,943,468...4,951,223
Ensembl chrNW_004624818:4,942,849...4,951,024
JBrowse link
G Znf827 zinc finger protein 827 located_in ISO (PMID:25150861), (PMID:30045876) UniProt PMID:25150861 PMID:30045876 NCBI chrNW_004624853:4,633,005...4,799,000
Ensembl chrNW_004624853:4,630,712...4,799,399
JBrowse link
chromosome, subtelomeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt6 sirtuin 6 located_in ISO (PMID:18337721) GO_Central PMID:18337721 NCBI chrNW_004624828:5,441,973...5,449,549
Ensembl chrNW_004624828:5,442,057...5,451,520
JBrowse link
chromosome, telomeric repeat region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rif1 replication timing regulatory factor 1 is_active_in
located_in
ISO
IEA
(PMID:24735877) BHF-UCL
TreeGrafter
PMID:24735877 GO_REF:0000118 NCBI chrNW_004624866:5,619,758...5,680,165 JBrowse link
CST complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctc1 CST telomere replication complex component 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,795,848...10,819,029
Ensembl chrNW_004624786:10,795,193...10,819,613
JBrowse link
G Stn1 STN1 subunit of CST complex part_of IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624831:2,999,061...3,030,447
Ensembl chrNW_004624831:2,999,800...3,030,443
JBrowse link
G Ten1 TEN1 subunit of CST complex part_of IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624801:5,867,474...5,900,298
Ensembl chrNW_004624801:5,880,221...5,900,121
JBrowse link
nuclear telomere cap complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD shelterin complex subunit and telomerase recruitment factor part_of ISO (PMID:16880378)
(PMID:18185984)
BHF-UCL PMID:16880378 PMID:18185984 NCBI chrNW_004624746:18,688,898...18,692,216
Ensembl chrNW_004624746:18,689,364...18,695,944
JBrowse link
G Pot1 protection of telomeres 1 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624783:11,138,222...11,223,329
Ensembl chrNW_004624783:11,138,303...11,223,044
JBrowse link
G Terf1 telomeric repeat binding factor 1 part_of IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624744:18,120,677...18,156,920
Ensembl chrNW_004624744:18,121,687...18,156,989
JBrowse link
G Terf2 telomeric repeat binding factor 2 part_of ISO (PMID:15181449), (PMID:16880378) BHF-UCL PMID:15181449 PMID:16880378 NCBI chrNW_004624746:16,992,049...17,020,809
Ensembl chrNW_004624746:16,992,110...17,019,857
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 part_of ISO (PMID:16880378) BHF-UCL PMID:16880378 NCBI chrNW_004624820:8,262,171...8,265,275
Ensembl chrNW_004624820:8,262,595...8,311,872
JBrowse link
shelterin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD shelterin complex subunit and telomerase recruitment factor part_of IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624746:18,688,898...18,692,216
Ensembl chrNW_004624746:18,689,364...18,695,944
JBrowse link
G LOC101699430 TERF1-interacting nuclear factor 2 part_of IEA TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624820:8,309,514...8,312,021 JBrowse link
G Pot1 protection of telomeres 1 part_of ISO (PMID:15383534), (PMID:23685356)
(PMID:21852327)
BHF-UCL
ComplexPortal
PMID:15383534 PMID:21852327 PMID:23685356 NCBI chrNW_004624783:11,138,222...11,223,329
Ensembl chrNW_004624783:11,138,303...11,223,044
JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 part_of ISO (PMID:26548954) UniProt PMID:26548954 NCBI chrNW_004624746:19,689,127...19,726,972
Ensembl chrNW_004624746:19,697,909...19,720,724
JBrowse link
G Terf1 telomeric repeat binding factor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:18,120,677...18,156,920
Ensembl chrNW_004624744:18,121,687...18,156,989
JBrowse link
G Terf2 telomeric repeat binding factor 2 part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:16,992,049...17,020,809
Ensembl chrNW_004624746:16,992,110...17,019,857
JBrowse link
G Terf2ip TERF2 interacting protein part_of IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:11,327,473...11,337,489
Ensembl chrNW_004624746:11,327,467...11,337,496
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 part_of IEA InterPro
TreeGrafter
GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624820:8,262,171...8,265,275
Ensembl chrNW_004624820:8,262,595...8,311,872
JBrowse link
telomere cap complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf2 telomeric repeat binding factor 2 part_of ISO (PMID:28031483) MGI PMID:28031483 NCBI chrNW_004624746:16,992,049...17,020,809
Ensembl chrNW_004624746:16,992,110...17,019,857
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18619
    cellular anatomical structure 18486
      chromosomal region 311
        chromosome, telomeric region 110
          chromosome, subtelomeric region + 1
          chromosome, telomeric repeat region + 12
          telomere-telomerase complex 0
Path 2
Term Annotations click to browse term
  cellular_component 18619
    cellular anatomical structure 18486
      organelle 13116
        membraneless organelle 4798
          intracellular membraneless organelle 4798
            chromosome 1303
              chromosomal region 311
                chromosome, telomeric region 110
                  chromosome, subtelomeric region + 1
                  chromosome, telomeric repeat region + 12
                  telomere-telomerase complex 0
paths to the root