Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome, telomeric region
go back to main search page
Accession:GO:0000781 term browser browse the term
Definition:The end of a linear chromosome, required for the integrity and maintenance of the end. A chromosome telomere usually includes a region of telomerase-encoded repeats the length of which rarely exceeds 20 bp each and that permits the formation of a telomeric loop (T-loop). The telomeric repeat region is usually preceded by a sub-telomeric region that is gene-poor but rich in repetitive elements. Some telomeres only consist of the latter part (for eg. D. melanogaster telomeres).
Comment:Note that this term can be used in place of the obsolete cellular component term 'telomere ; GO:0005696'. Use with caution because this term refers to a specific region of the chromosome and not a protein complex.
Synonyms:narrow_synonym: nuclear chromosome, telomere;   nuclear chromosome, telomeric region
 related_synonym: telomere
 alt_id: GO:0000784
 xref: SO:0000624



show annotations for term's descendants           Sort by:
chromosome, telomeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor located_in ISO (PMID:15380063), (PMID:23685356), (PMID:24270157), (PMID:25172512)
(PMID:23685356)
RGD PMID:15380063 PMID:23685356 PMID:24270157 PMID:25172512 NCBI chr19:50,496,634...50,499,397
Ensembl chr19:33,586,745...33,589,461
JBrowse link
G Alyref Aly/REF export factor located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr10:105,871,424...105,875,076
Ensembl chr10:105,871,306...105,875,069
JBrowse link
G Atm ATM serine/threonine kinase located_in ISO (PMID:15149599) RGD PMID:15149599 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Atrx ATRX, chromatin remodeler located_in ISS
ISO
IEA
GO_REF:0000024
(PMID:20110566), (PMID:23444137), (PMID:26159997)
GO_REF:0000044
UniProt
RGD
PMID:20110566 PMID:23444137 PMID:26159997 GO_REF:0000024 GO_REF:0000044 NCBI chr  X:74,916,548...75,062,880
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Blm BLM RecQ like helicase located_in ISO (PMID:10779560)
(PMID:26195664)
RGD PMID:10779560 PMID:26195664 NCBI chr 1:143,819,072...143,905,300
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Brca2 BRCA2, DNA repair associated located_in ISO
IEA
(PMID:21076401)
GO_REF:0000107
RGD
Ensembl
PMID:21076401 GO_REF:0000107 NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567
JBrowse link
G Cbx1 chromobox 1 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr10:82,266,746...82,286,431
Ensembl chr10:81,770,342...81,791,096
JBrowse link
G Cbx5 chromobox 5 located_in ISO (PMID:20110566) RGD PMID:20110566 NCBI chr 7:136,203,827...136,254,575
Ensembl chr 7:134,331,335...134,375,022
JBrowse link
G Cdk2 cyclin dependent kinase 2 located_in IEA
ISO
GO_REF:0000107
(PMID:17784788), (PMID:28031483), (PMID:30718482)
Ensembl
RGD
PMID:17784788 PMID:28031483 PMID:30718482 GO_REF:0000107 NCBI chr 7:1,714,392...1,721,964
Ensembl chr 7:1,129,811...1,137,403
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 located_in ISO (PMID:25150861) RGD PMID:25150861 NCBI chr 4:159,584,623...159,617,867
Ensembl chr 4:157,899,391...157,931,541
JBrowse link
G Chek1 checkpoint kinase 1 located_in ISO (PMID:15149599) RGD PMID:15149599 NCBI chr 8:44,609,417...44,629,867
Ensembl chr 8:36,420,569...36,441,009
JBrowse link
G Chek2 checkpoint kinase 2 located_in ISO (PMID:15149599) RGD PMID:15149599 NCBI chr12:51,448,838...51,481,159
Ensembl chr12:45,788,827...45,821,286
JBrowse link
G Ctc1 CST telomere replication complex component 1 located_in ISO (PMID:19854130) RGD PMID:19854130 NCBI chr10:54,212,537...54,234,146
Ensembl chr10:53,714,644...53,735,298
JBrowse link
G Dclre1b DNA cross-link repair 1B located_in ISS
ISO
IEA
GO_REF:0000024
(PMID:20551906), (PMID:20619712)
(PMID:16730175), (PMID:20479256), (PMID:20655466), (PMID:24270157)
GO_REF:0000044
UniProt
RGD
PMID:16730175 PMID:20479256 PMID:20551906 PMID:20619712 PMID:20655466 More... GO_REF:0000024 GO_REF:0000044 NCBI chr 2:193,998,350...194,006,873
Ensembl chr 2:191,309,913...191,318,423
JBrowse link
G Dhx36 DEAH-box helicase 36 located_in ISO
ISS
(PMID:20472641), (PMID:21846770)
GO_REF:0000024
RGD
UniProt
PMID:20472641 PMID:21846770 GO_REF:0000024 NCBI chr 2:149,006,089...149,044,192
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dmc1 DNA meiotic recombinase 1 located_in ISO (PMID:20336070) RGD PMID:20336070 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952
JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:8,918,764...8,959,474
Ensembl chr 7:8,917,786...8,956,475
JBrowse link
G Eid3 EP300 interacting inhibitor of differentiation 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:20,860,073...20,861,395 JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit located_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:88,099,308...88,135,966
Ensembl chr 1:78,996,390...79,007,963
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit located_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr10:2,926,085...2,958,176
Ensembl chr10:2,419,038...2,448,369
Ensembl chr10:2,419,038...2,448,369
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit located_in ISO UniProtKB:P38827 (PMID:9214638) RGD PMID:9214638 NCBI chr10:86,626,307...86,662,257
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit located_in ISO UniProtKB:P38827 (PMID:9214638) RGD PMID:9214638 NCBI chr 4:77,624,223...77,698,598
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Fen1 flap structure-specific endonuclease 1 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr 1:216,270,016...216,274,873
Ensembl chr 1:206,844,884...206,850,003
JBrowse link
G Gar1 GAR1 ribonucleoprotein located_in IEA
ISO
GO_REF:0000107
(PMID:24270157)
Ensembl
RGD
PMID:24270157 GO_REF:0000107 NCBI chr 2:221,049,471...221,056,749
Ensembl chr 2:218,375,353...218,382,524
JBrowse link
G Gatad2b GATA zinc finger domain containing 2B located_in ISO (PMID:25150861) RGD PMID:25150861 NCBI chr 2:178,046,192...178,127,633
Ensembl chr 2:175,749,433...175,825,542
JBrowse link
G H2ax H2A.X variant histone located_in ISO (PMID:15149599) RGD PMID:15149599 NCBI chr 8:53,568,718...53,570,072
Ensembl chr 8:44,671,786...44,673,239
Ensembl chr 4:44,671,786...44,673,239
JBrowse link
G H3f3a H3.3 histone A located_in ISO (PMID:20110566) RGD PMID:20110566 NCBI chr13:95,065,085...95,076,695
Ensembl chr13:92,533,298...92,544,908
JBrowse link
G H3f3b H3.3 histone B located_in ISO (PMID:20110566) RGD PMID:20110566 NCBI chr10:101,755,404...101,764,616
Ensembl chr10:101,256,480...101,258,709
Ensembl chr13:101,256,480...101,258,709
JBrowse link
G Hat1 histone acetyltransferase 1 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517
JBrowse link
G Hdac2 histone deacetylase 2 located_in ISO (PMID:25150861) RGD PMID:25150861 NCBI chr20:42,101,815...42,126,486
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hmbox1 homeobox containing 1 located_in ISO (PMID:23685356) RGD PMID:23685356 NCBI chr15:43,243,503...43,376,011
Ensembl chr15:39,067,804...39,200,323
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 located_in IDA PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chr 4:81,867,354...81,875,886
Ensembl chr 4:80,534,651...80,545,249
JBrowse link
G Kash5 KASH domain containing 5 is_active_in
located_in
IBA
ISO
GO_REF:0000033
(PMID:22826121)
GO_Central
RGD
PMID:22826121 GO_REF:0000033 NCBI chr 1:104,805,248...104,827,720
Ensembl chr 1:95,668,886...95,691,368
JBrowse link
G Kdm1a lysine demethylase 1A located_in ISO (PMID:24529708) RGD PMID:24529708 NCBI chr 5:154,066,436...154,121,913
Ensembl chr 5:148,782,976...148,838,319
JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 located_in IEA
ISO
GO_REF:0000107
(PMID:24270157)
Ensembl
RGD
PMID:24270157 GO_REF:0000107 NCBI chr 2:194,231,397...194,322,489
Ensembl chr 2:194,230,951...194,322,483
JBrowse link
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 located_in ISO (PMID:20932478) RGD PMID:20932478 NCBI chr12:20,530,035...20,543,078
Ensembl chr12:20,530,012...20,549,536
JBrowse link
G Majin membrane anchored junction protein located_in ISS
ISO
GO_REF:0000024
(PMID:26548954), (PMID:28031483)
UniProt
RGD
PMID:26548954 PMID:28031483 GO_REF:0000024 NCBI chr 1:203,487,777...203,524,098
Ensembl chr 1:203,488,069...203,524,092
JBrowse link
G Men1 menin 1 located_in ISO (PMID:12203793) RGD PMID:12203793 NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:203,639,000...203,644,871
JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease located_in IEA
ISO
GO_REF:0000107
(PMID:10811102), (PMID:15149599), (PMID:24270157)
(PMID:23444137)
Ensembl
RGD
PMID:10811102 PMID:15149599 PMID:23444137 PMID:24270157 GO_REF:0000107 NCBI chr 8:19,900,211...19,961,906
Ensembl chr 8:11,632,354...11,678,279
JBrowse link
G Mta2 metastasis associated 1 family, member 2 located_in ISO (PMID:25150861) RGD PMID:25150861 NCBI chr 1:215,267,286...215,276,008
Ensembl chr 1:205,837,964...205,846,946
JBrowse link
G Nabp1 nucleic acid binding protein 1 located_in ISO (PMID:23459151) RGD PMID:23459151 NCBI chr 9:57,570,326...57,625,926
Ensembl chr 9:50,126,726...50,134,107
JBrowse link
G Nabp2 nucleic acid binding protein 2 located_in ISO
IEA
(PMID:25589350)
(PMID:23459151)
GO_REF:0000107
RGD
Ensembl
PMID:23459151 PMID:25589350 GO_REF:0000107 NCBI chr 7:1,415,491...1,421,113
Ensembl chr 7:830,949...838,027
JBrowse link
G Nbn nibrin located_in
is_active_in
IEA
ISO
ISS
GO_REF:0000044
(PMID:10811102), (PMID:23444137)
(PMID:28216226)
GO_REF:0000024
(PMID:10888888)
UniProt
RGD
PMID:10811102 PMID:10888888 PMID:23444137 PMID:28216226 GO_REF:0000024 GO_REF:0000044 NCBI chr 5:34,256,678...34,291,163
Ensembl chr 5:29,459,457...29,494,150
JBrowse link
G Nlrp2 NLR family pyrin domain containing 2 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr 1:78,557,956...78,597,160
Ensembl chr 1:69,515,505...69,554,454
JBrowse link
G Nsmce1 NSE1 homolog, SMC5-SMC6 complex component located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:189,462,801...189,489,188
Ensembl chr 1:180,030,160...180,058,417
JBrowse link
G Nsmce2 NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase located_in ISO
IEA
ISS
(PMID:17589526)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17589526 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:90,936,112...91,173,435
Ensembl chr 7:90,936,112...91,164,899
JBrowse link
G Nsmce4a NSE4 homolog A, SMC5-SMC6 complex component located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:185,102,075...185,109,166
Ensembl chr 1:185,094,360...185,109,166
JBrowse link
G Orc1 origin recognition complex, subunit 1 located_in IEA
ISO
GO_REF:0000107
(PMID:24270157)
Ensembl
RGD
PMID:24270157 GO_REF:0000107 NCBI chr 5:123,324,273...123,348,375
Ensembl chr 5:123,324,315...123,348,375
JBrowse link
G Orc2 origin recognition complex, subunit 2 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr 9:67,496,097...67,532,548
Ensembl chr 9:60,001,910...60,038,195
JBrowse link
G Orc4 origin recognition complex, subunit 4 located_in IEA
ISO
GO_REF:0000107
(PMID:24270157)
Ensembl
RGD
PMID:24270157 GO_REF:0000107 NCBI chr 3:53,700,046...53,743,293
Ensembl chr 3:33,294,355...33,333,824
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase located_in ISO (PMID:16522649) RGD PMID:16522649 NCBI chr 8:75,005,820...75,015,331
Ensembl chr 8:66,111,072...66,120,200
JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 located_in ISO
IEA
(PMID:11701125), (PMID:19265708), (PMID:21119197), (PMID:24415760)
GO_REF:0000107
RGD
Ensembl
PMID:11701125 PMID:19265708 PMID:21119197 PMID:24415760 GO_REF:0000107 NCBI chr15:42,273,805...42,333,047
Ensembl chr15:38,097,886...38,157,140
JBrowse link
G Pml PML nuclear body scaffold located_in ISO (PMID:26119943) RGD PMID:26119943 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit located_in IEA
ISO
GO_REF:0000107
(PMID:24270157)
Ensembl
RGD
PMID:24270157 GO_REF:0000107 NCBI chr 1:104,161,984...104,178,074
Ensembl chr 1:95,025,499...95,036,465
JBrowse link
G Polr2b RNA polymerase II subunit B located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr14:30,797,228...30,834,916
Ensembl chr14:30,797,228...30,834,916
JBrowse link
G Pot1 protection of telomeres 1 located_in ISO (PMID:12768206), (PMID:23685356), (PMID:24270157)
(PMID:23685356)
RGD PMID:12768206 PMID:23685356 PMID:24270157 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr 1:210,914,576...210,918,193
Ensembl chr 1:201,485,085...201,497,327
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr 6:29,681,099...29,712,835
Ensembl chr 6:23,960,998...23,992,824
JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr12:40,043,822...40,061,301
Ensembl chr12:34,383,072...34,400,553
JBrowse link
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr20:2,827,802...2,842,418
Ensembl chr20:2,822,995...2,837,611
JBrowse link
G Rad17 RAD17 checkpoint clamp loader component located_in ISO (PMID:15149599) RGD PMID:15149599 NCBI chr 2:33,498,335...33,528,614
Ensembl chr 2:31,764,261...31,794,072
JBrowse link
G Rad50 RAD50 double strand break repair protein located_in IEA
ISO
GO_REF:0000044
(PMID:10888888), (PMID:24270157)
UniProt
RGD
PMID:10888888 PMID:24270157 GO_REF:0000044 NCBI chr10:38,310,147...38,362,100
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Rad51 RAD51 recombinase located_in ISO (PMID:21076401) RGD PMID:21076401 NCBI chr 3:126,554,210...126,578,888
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Rad51d RAD51 paralog D located_in ISO (PMID:15109494) RGD PMID:15109494 NCBI chr10:67,805,720...67,824,452
Ensembl chr10:67,740,712...67,824,434
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor located_in ISO (PMID:30045876) RGD PMID:30045876 NCBI chr 5:146,940,207...146,959,501
Ensembl chr 5:141,638,421...141,675,284
Ensembl chr 2:141,638,421...141,675,284
JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor located_in ISO (PMID:25150861) RGD PMID:25150861 NCBI chr  X:31,913,080...31,931,245
Ensembl chr  X:31,913,081...31,931,226
JBrowse link
G Recql4 RecQ like helicase 4 located_in ISO (PMID:22039056) RGD PMID:22039056 NCBI chr 7:110,304,092...110,311,426
Ensembl chr 7:108,423,455...108,430,619
JBrowse link
G Rif1 replication timing regulatory factor 1 located_in ISO (PMID:15042697) RGD PMID:15042697 NCBI chr 3:56,963,840...57,017,106
Ensembl chr 3:36,554,697...36,603,617
JBrowse link
G Rnf8 ring finger protein 8 located_in ISS
ISO
GO_REF:0000024
(PMID:21857671)
UniProt
RGD
PMID:21857671 GO_REF:0000024 NCBI chr20:7,683,890...7,708,437
Ensembl chr20:7,682,322...7,708,491
JBrowse link
G Rpa2 replication protein A2 located_in
is_active_in
ISS
ISO
IBA
GO_REF:0000024
(PMID:17959650)
GO_REF:0000033
UniProt
RGD
GO_Central
PMID:17959650 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:150,260,668...150,271,329
Ensembl chr 5:144,976,748...144,987,350
JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 located_in ISO (PMID:22579284) RGD PMID:22579284 NCBI chr 3:188,778,329...188,842,877
Ensembl chr 3:168,419,579...168,465,348
JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit located_in ISO (PMID:19596235), (PMID:24012755) RGD PMID:19596235 PMID:24012755 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295
JBrowse link
G Smc5 structural maintenance of chromosomes 5 located_in ISO (PMID:17589526)
(PMID:19793919)
RGD PMID:17589526 PMID:19793919 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096
JBrowse link
G Smc6 structural maintenance of chromosomes 6 located_in ISO (PMID:17589526) RGD PMID:17589526 NCBI chr 6:39,697,810...39,752,275
Ensembl chr 6:33,978,716...34,031,746
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr 9:118,690,050...118,837,281
Ensembl chr 9:111,247,702...111,349,665
JBrowse link
G Smg6 SMG6 nonsense mediated mRNA decay factor located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:59,786,258...60,014,395
Ensembl chr10:59,786,258...60,014,395
JBrowse link
G Spdya speedy/RINGO cell cycle regulator family member A located_in ISO (PMID:28031483), (PMID:30718482) RGD PMID:28031483 PMID:30718482 NCBI chr 6:29,619,415...29,675,030
Ensembl chr 6:23,910,223...23,954,850
JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks located_in ISO (PMID:20336070) RGD PMID:20336070 NCBI chr 3:161,755,299...161,770,930
Ensembl chr 3:161,757,519...161,770,925
JBrowse link
G Stn1 STN1 subunit of CST complex located_in ISO
ISS
(PMID:19648609), (PMID:19854130)
(PMID:19854130)
GO_REF:0000024
RGD
UniProt
PMID:19648609 PMID:19854130 GO_REF:0000024 NCBI chr 1:246,391,311...246,429,844
Ensembl chr 1:246,395,613...246,429,531
JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 located_in ISO (PMID:28031483) RGD PMID:28031483 NCBI chr12:20,510,230...20,555,123
Ensembl chr12:15,396,381...15,441,571
JBrowse link
G Sun2 Sad1 and UNC84 domain containing 2 located_in ISO (PMID:17452644) RGD PMID:17452644 NCBI chr 7:113,155,766...113,172,950
Ensembl chr 7:111,275,380...111,292,553
JBrowse link
G Ten1 TEN1 subunit of CST complex located_in ISO (PMID:19854130) RGD PMID:19854130 NCBI chr10:101,930,212...101,951,932
Ensembl chr10:101,431,328...101,453,052
JBrowse link
G Tep1 telomerase associated protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr15:26,519,429...26,567,073
Ensembl chr15:24,045,878...24,093,526
JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 located_in ISO (PMID:24413433), (PMID:24885367), (PMID:26548954), (PMID:28031483) RGD PMID:24413433 PMID:24885367 PMID:26548954 PMID:28031483 NCBI chr19:473,720...528,069
Ensembl chr19:473,218...528,084
JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 located_in ISO (PMID:26548954) RGD PMID:26548954 NCBI chr 3:109,138,343...109,156,700
Ensembl chr 3:109,138,343...109,156,683
JBrowse link
G Terc telomerase RNA component located_in ISO (PMID:26950371) RGD PMID:26950371 NCBI chr 2:112,815,654...112,816,041 JBrowse link
G Terf1 telomeric repeat binding factor 1 located_in ISO (PMID:15133513), (PMID:15380063), (PMID:19487455), (PMID:23685356), (PMID:24270157), (PMID:24415760)
(PMID:15109494), (PMID:15968270), (PMID:17053789), (PMID:23685356), (PMID:24589552), (PMID:30718482)
(PMID:11313893), (PMID:21119197)
(PMID:9034193)
(PMID:9391075)
RGD PMID:9034193 PMID:9391075 PMID:11313893 PMID:15109494 PMID:15133513 More... NCBI chr 5:8,226,345...8,255,614
Ensembl chr 5:3,443,106...3,472,340
JBrowse link
G Terf2 telomeric repeat binding factor 2 located_in
is_active_in
ISO (PMID:12768206), (PMID:15109494), (PMID:20479256), (PMID:20655466), (PMID:23685356), (PMID:24012755), (PMID:24270157)
(PMID:15109494), (PMID:15968270), (PMID:17696610), (PMID:23685356)
(PMID:28216226)
RGD PMID:12768206 PMID:15109494 PMID:15968270 PMID:17696610 PMID:20479256 More... NCBI chr19:51,887,221...51,915,756
Ensembl chr19:34,977,471...35,005,819
JBrowse link
G Terf2ip TERF2 interacting protein located_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15109494), (PMID:15968270), (PMID:20339076), (PMID:20622869), (PMID:23685356)
GO_REF:0000044
UniProt
RGD
PMID:15109494 PMID:15968270 PMID:20339076 PMID:20622869 PMID:23685356 GO_REF:0000024 GO_REF:0000044 NCBI chr19:39,976,965...39,984,055
Ensembl chr19:39,976,906...39,984,064
JBrowse link
G Tert telomerase reverse transcriptase located_in ISO
IEA
(PMID:25589350)
GO_REF:0000044
RGD
UniProt
PMID:25589350 GO_REF:0000044 NCBI chr 1:31,465,766...31,488,650
Ensembl chr 1:29,637,506...29,659,561
JBrowse link
G Tfip11 tuftelin interacting protein 11 located_in ISO (PMID:17389648) RGD PMID:17389648 NCBI chr12:49,960,025...49,972,257
Ensembl chr12:44,299,622...44,311,855
JBrowse link
G Thoc1 THO complex subunit 1 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr18:1,253,041...1,291,956
Ensembl chr18:983,824...1,019,114
JBrowse link
G Thoc2 THO complex subunit 2 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr  X:125,500,549...125,615,139
Ensembl chr  X:120,634,968...120,749,513
JBrowse link
G Thoc3 THO complex subunit 3 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr17:10,143,184...10,152,375
Ensembl chr17:10,143,139...10,152,370
JBrowse link
G Thoc5 THO complex subunit 5 located_in IEA
ISO
GO_REF:0000107
(PMID:24270157)
Ensembl
RGD
PMID:24270157 GO_REF:0000107 NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718
JBrowse link
G Thoc6 THO complex subunit 6 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr10:12,700,051...12,705,411
Ensembl chr10:12,700,051...12,706,925
JBrowse link
G Thoc7 THO complex subunit 7 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr15:13,692,855...13,707,692
Ensembl chr15:11,262,613...11,277,193
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 located_in ISO (PMID:10581025), (PMID:12768206), (PMID:15133513), (PMID:15380063), (PMID:23685356), (PMID:24270157)
(PMID:12676566), (PMID:23685356)
RGD PMID:10581025 PMID:12676566 PMID:12768206 PMID:15133513 PMID:15380063 More... NCBI chr15:33,140,611...33,146,930
Ensembl chr15:29,170,652...29,176,984
JBrowse link
G Tnks tankyrase located_in ISO (PMID:11739745), (PMID:9822378) RGD PMID:9822378 PMID:11739745 NCBI chr16:63,922,969...64,073,972
Ensembl chr16:57,225,094...57,366,260
JBrowse link
G Tox4 TOX high mobility group box family member 4 located_in ISO
IEA
(PMID:24270157)
GO_REF:0000107
RGD
Ensembl
PMID:24270157 GO_REF:0000107 NCBI chr15:27,462,735...27,476,320
Ensembl chr15:24,988,853...25,002,833
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 located_in ISO (PMID:15149599)
(PMID:19001091)
RGD PMID:15149599 PMID:19001091 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase located_in ISO (PMID:21829167) RGD PMID:21829167 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Wdr82 WD repeat domain 82 located_in ISO (PMID:24270157) RGD PMID:24270157 NCBI chr 8:115,693,297...115,713,262
Ensembl chr 8:106,814,569...106,834,438
JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:54,282,092...54,299,908
Ensembl chr10:54,282,105...54,298,929
JBrowse link
G Wrn WRN RecQ like helicase located_in ISO (PMID:15200954), (PMID:26420422)
(PMID:26195664)
RGD PMID:15200954 PMID:26195664 PMID:26420422 NCBI chr16:65,466,552...65,602,951
Ensembl chr16:58,763,504...58,895,450
JBrowse link
G Wrnip1 WRN helicase interacting protein 1 located_in IEA
ISO
GO_REF:0000107
(PMID:24270157)
Ensembl
RGD
PMID:24270157 GO_REF:0000107 NCBI chr17:31,830,159...31,850,408
Ensembl chr17:31,621,411...31,641,659
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 located_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 1:89,268,721...89,296,619
Ensembl chr 1:80,141,207...80,168,701
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 located_in ISO (PMID:14690602) RGD PMID:14690602 NCBI chr 2:22,686,506...22,932,929
Ensembl chr 2:20,951,200...21,197,808
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 located_in ISO (PMID:10535943) RGD PMID:10535943 NCBI chr 9:81,404,507...81,493,293
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
G Zbtb10 zinc finger and BTB domain containing 10 located_in ISO
IEA
(PMID:30629181)
GO_REF:0000107
RGD
Ensembl
PMID:30629181 GO_REF:0000107 NCBI chr 2:92,475,254...92,509,892
Ensembl chr 2:92,479,014...92,512,515
JBrowse link
G Zbtb48 zinc finger and BTB domain containing 48 located_in ISO (PMID:28082411), (PMID:28500257) RGD PMID:28082411 PMID:28500257 NCBI chr 5:162,525,234...162,533,604
Ensembl chr 5:162,525,235...162,533,585
JBrowse link
G Zfp827 zinc finger protein 827 located_in ISO (PMID:25150861), (PMID:30045876) RGD PMID:25150861 PMID:30045876 NCBI chr19:28,720,568...28,887,381
Ensembl chr19:28,721,021...28,887,191
JBrowse link
chromosome, subtelomeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX, chromatin remodeler located_in ISO
IEA
(PMID:26055325)
GO_REF:0000107
RGD
Ensembl
PMID:26055325 GO_REF:0000107 NCBI chr  X:74,916,548...75,062,880
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Sirt6 sirtuin 6 located_in ISO (PMID:18337721) RGD PMID:18337721 NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914
JBrowse link
chromosome, telomeric repeat region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rif1 replication timing regulatory factor 1 is_active_in ISO
IBA
(PMID:24735877)
GO_REF:0000033
RGD
GO_Central
PMID:24735877 GO_REF:0000033 NCBI chr 3:56,963,840...57,017,106
Ensembl chr 3:36,554,697...36,603,617
JBrowse link
CST complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctc1 CST telomere replication complex component 1 part_of ISO
IBA
(PMID:19854130), (PMID:22763445)
GO_REF:0000033
RGD
GO_Central
PMID:19854130 PMID:22763445 GO_REF:0000033 NCBI chr10:54,212,537...54,234,146
Ensembl chr10:53,714,644...53,735,298
JBrowse link
G Stn1 STN1 subunit of CST complex part_of IEA
ISO
IBA
GO_REF:0000107
(PMID:19854130), (PMID:22763445)
GO_REF:0000002
GO_REF:0000033
Ensembl
RGD
InterPro
GO_Central
PMID:19854130 PMID:22763445 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:246,391,311...246,429,844
Ensembl chr 1:246,395,613...246,429,531
JBrowse link
G Ten1 TEN1 subunit of CST complex part_of ISO
IBA
(PMID:19854130), (PMID:22763445)
GO_REF:0000033
RGD
GO_Central
PMID:19854130 PMID:22763445 GO_REF:0000033 NCBI chr10:101,930,212...101,951,932
Ensembl chr10:101,431,328...101,453,052
JBrowse link
nuclear telomere cap complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor part_of ISO (PMID:16880378)
(PMID:18185984)
RGD PMID:16880378 PMID:18185984 NCBI chr19:50,496,634...50,499,397
Ensembl chr19:33,586,745...33,589,461
JBrowse link
G Pot1 protection of telomeres 1 part_of ISO
IBA
(PMID:16880378)
(PMID:17053789)
GO_REF:0000033
RGD
GO_Central
PMID:16880378 PMID:17053789 GO_REF:0000033 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042
JBrowse link
G Pot1b protection of telomeres 1B part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:9,997,508...10,055,752
Ensembl chr 9:9,670,362...9,728,532
JBrowse link
G Terf1 telomeric repeat binding factor 1 part_of ISO (PMID:16880378)
(PMID:7502076)
RGD PMID:7502076 PMID:16880378 NCBI chr 5:8,226,345...8,255,614
Ensembl chr 5:3,443,106...3,472,340
JBrowse link
G Terf2 telomeric repeat binding factor 2 part_of ISO (PMID:15181449), (PMID:16880378) RGD PMID:15181449 PMID:16880378 NCBI chr19:51,887,221...51,915,756
Ensembl chr19:34,977,471...35,005,819
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 part_of ISO (PMID:16880378) RGD PMID:16880378 NCBI chr15:33,140,611...33,146,930
Ensembl chr15:29,170,652...29,176,984
JBrowse link
shelterin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor part_of ISO
IBA
IEA
(PMID:15383534), (PMID:21852327), (PMID:23685356)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:15383534 PMID:21852327 PMID:23685356 GO_REF:0000033 GO_REF:0000107 NCBI chr19:50,496,634...50,499,397
Ensembl chr19:33,586,745...33,589,461
JBrowse link
G Pot1 protection of telomeres 1 part_of ISO (PMID:15383534), (PMID:21852327), (PMID:23685356) RGD PMID:15383534 PMID:21852327 PMID:23685356 NCBI chr 4:55,170,821...55,228,588
Ensembl chr 4:54,205,332...54,263,042
JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 part_of ISO (PMID:26548954) RGD PMID:26548954 NCBI chr19:473,720...528,069
Ensembl chr19:473,218...528,084
JBrowse link
G Terf1 telomeric repeat binding factor 1 part_of ISO (PMID:15383534), (PMID:21852327), (PMID:23685356) RGD PMID:15383534 PMID:21852327 PMID:23685356 NCBI chr 5:8,226,345...8,255,614
Ensembl chr 5:3,443,106...3,472,340
JBrowse link
G Terf2 telomeric repeat binding factor 2 part_of ISO
IBA
(PMID:15383534), (PMID:21852327), (PMID:23685356)
GO_REF:0000033
RGD
GO_Central
PMID:15383534 PMID:21852327 PMID:23685356 GO_REF:0000033 NCBI chr19:51,887,221...51,915,756
Ensembl chr19:34,977,471...35,005,819
JBrowse link
G Terf2ip TERF2 interacting protein part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:39,976,965...39,984,055
Ensembl chr19:39,976,906...39,984,064
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 part_of ISO (PMID:15383534), (PMID:21852327), (PMID:23685356) RGD PMID:15383534 PMID:21852327 PMID:23685356 NCBI chr15:33,140,611...33,146,930
Ensembl chr15:29,170,652...29,176,984
JBrowse link
telomere cap complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Terf2 telomeric repeat binding factor 2 part_of ISO (PMID:28031483) RGD PMID:28031483 NCBI chr19:51,887,221...51,915,756
Ensembl chr19:34,977,471...35,005,819
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21327
    cellular anatomical structure 21032
      chromosomal region 333
        chromosome, telomeric region 114
          chromosome, subtelomeric region + 2
          chromosome, telomeric repeat region + 12
          telomere-telomerase complex 0
Path 2
Term Annotations click to browse term
  cellular_component 21327
    cellular anatomical structure 21032
      organelle 14243
        membraneless organelle 5379
          intracellular membraneless organelle 5379
            chromosome 1403
              chromosomal region 333
                chromosome, telomeric region 114
                  chromosome, subtelomeric region + 2
                  chromosome, telomeric repeat region + 12
                  telomere-telomerase complex 0
paths to the root