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ONTOLOGY REPORT - ANNOTATIONS


Term:condensed nuclear chromosome kinetochore
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Accession:GO:0000778 term browser browse the term
Definition:A multisubunit complex that is located at the centromeric region of a condensed nuclear chromosome and provides an attachment point for the spindle microtubules.


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condensed nuclear chromosome kinetochore term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B ISO
IBA
(MGI:3806388|PMID:18765791)
PMID:21873635
RGD PMID:18765791, PMID:21873635 MGI:3806388, RGD:13792537 NCBI chr 3:110,367,949...110,420,471
Ensembl chr 3:110,367,939...110,420,458
JBrowse link
G Cenpa centromere protein A ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 6:27,072,259...27,080,863
Ensembl chr 6:27,072,166...27,080,856
JBrowse link
G Cenpc centromere protein C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:23,611,909...23,670,314
Ensembl chr14:23,611,735...23,670,475
JBrowse link
G Cenpe centromere protein E ISO (MGI:3806388|PMID:18765791) RGD PMID:18765791 MGI:3806388 NCBI chr 2:240,395,974...240,454,785
Ensembl chr 2:240,396,152...240,454,747
JBrowse link
G Cenpo centromere protein O IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:28,648,804...28,663,527
Ensembl chr 6:28,649,638...28,663,233
JBrowse link
G Cenpt centromere protein T IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,813,284...37,819,782
Ensembl chr19:37,812,751...37,819,789
JBrowse link
G Mis18bp1 MIS18 binding protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:86,879,106...86,925,209
Ensembl chr 6:86,879,719...86,924,146
JBrowse link
G Ndc80 NDC80 kinetochore complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Nuf2 NUF2 component of NDC80 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:87,818,456...87,847,223
Ensembl chr13:87,818,391...87,847,263
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 ISO (MGI:6378311|PMID:28410192) RGD PMID:28410192 MGI:6378311 NCBI chr14:106,008,086...106,062,566
Ensembl chr14:106,008,086...106,061,641
JBrowse link
G Rec8 REC8 meiotic recombination protein ISO (MGI:3806388|PMID:18765791) RGD PMID:18765791 MGI:3806388 NCBI chr15:34,296,922...34,304,387
Ensembl chr15:34,296,922...34,304,552
JBrowse link
condensed nuclear chromosome inner kinetochore term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpk centromere protein K IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:34,312,766...34,373,945
Ensembl chr 2:34,312,766...34,335,776
JBrowse link
G Dsn1 DSN1 component of MIS12 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
condensed nuclear chromosome outer kinetochore term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bub1 BUB1 mitotic checkpoint serine/threonine kinase ISO (PMID:24055156) RGD PMID:24055156 NCBI chr 3:120,373,604...120,404,910
Ensembl chr 3:120,373,604...120,404,910
JBrowse link
G Ccnb1 cyclin B1 ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Ndc80 NDC80 kinetochore complex component ISO (PMID:18195732) RGD PMID:18195732 NCBI chr 9:119,837,857...119,871,435
Ensembl chr 9:119,839,016...119,871,382
JBrowse link
G Plk1 polo-like kinase 1 ISO
IEA
(PMID:18195732)
GO_REF:0000107
RGD
Ensembl
PMID:18195732 GO_REF:0000107 NCBI chr 1:192,115,990...192,125,969
Ensembl chr 1:192,115,966...192,125,989
JBrowse link
nuclear MIS12/MIND complex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsn1 DSN1 component of MIS12 kinetochore complex IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,101,020...153,115,326
Ensembl chr 3:153,101,036...153,114,520
JBrowse link
G Mis12 MIS12 kinetochore complex component IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,653,685...57,661,833
Ensembl chr10:57,660,067...57,660,687
JBrowse link
G Pmf1 polyamine-modulated factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:187,751,770...187,771,933
Ensembl chr 2:187,751,776...187,771,865
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20615
    cellular anatomical entity 20304
      supramolecular complex 1263
        kinetochore 126
          condensed chromosome kinetochore 73
            condensed nuclear chromosome kinetochore 18
              COMA complex 0
              condensed nuclear chromosome inner kinetochore 2
              condensed nuclear chromosome outer kinetochore + 4
              nuclear MIS12/MIND complex 3
Path 2
Term Annotations click to browse term
  cellular_component 20615
    cellular anatomical entity 20304
      organelle 13278
        non-membrane-bounded organelle 5195
          intracellular non-membrane-bounded organelle 5178
            chromosome 1421
              chromosomal region 291
                chromosome, centromeric region 190
                  condensed chromosome, centromeric region 92
                    condensed chromosome kinetochore 73
                      condensed nuclear chromosome kinetochore 18
                        COMA complex 0
                        condensed nuclear chromosome inner kinetochore 2
                        condensed nuclear chromosome outer kinetochore + 4
                        nuclear MIS12/MIND complex 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.