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ONTOLOGY REPORT - ANNOTATIONS

Term:autophagy of mitochondrion
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Accession:GO:0000422 term browser browse the term
Definition:The autophagic process in which mitochondria are delivered to a type of vacuole and degraded in response to changing cellular conditions.
Synonyms:broad_synonym: mitochondrion degradation;   mitochondrion disassembly
 related_synonym: mitophagy

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autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:23981124) MGI PMID:23981124 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236 		JBrowse link
G Capn10 calpain 10 ISO RGD PMID:22568896 RGD:7247732 NCBI chrNW_004955542:874,083...885,085
Ensembl chrNW_004955542:874,083...885,084 		JBrowse link
G Cisd2 CDGSH iron sulfur domain 2 involved_in ISO (PMID:19451219) UniProt PMID:19451219 NCBI chrNW_004955496:5,656,686...5,672,888
Ensembl chrNW_004955496:5,656,686...5,673,529 		JBrowse link
G Fbxl4 F-box and leucine rich repeat protein 4 acts_upstream_of_or_within ISO (PMID:32525278) MGI PMID:32525278 NCBI chrNW_004955411:24,757,445...24,814,642
Ensembl chrNW_004955411:24,757,445...24,814,643 		JBrowse link
G Fbxo7 F-box protein 7 involved_in ISO (PMID:23933751) UniProt PMID:23933751 NCBI chrNW_004955405:41,429,421...41,449,670
Ensembl chrNW_004955405:41,433,082...41,453,909 		JBrowse link
G Fundc1 FUN14 domain containing 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:22267086) MGI
UniProt		 PMID:22267086 NCBI chrNW_004955516:3,648,629...3,664,032
Ensembl chrNW_004955516:3,648,629...3,664,032 		JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha acts_upstream_of_or_within ISO (PMID:22267086) MGI PMID:22267086 NCBI chrNW_004955422:26,774,466...26,776,024
Ensembl chrNW_004955422:26,774,922...26,775,884 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:20798600), (PMID:23933751), (PMID:24896179) UniProt PMID:20798600 PMID:23933751 PMID:24896179 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:19783904 RGD:10059673 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:19029340), (PMID:23933751), (PMID:24896179)
(PMID:25621951)		 UniProt PMID:19029340 PMID:23933751 PMID:24896179 PMID:25621951 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152 		JBrowse link
G Slc25a46 solute carrier family 25 member 46 acts_upstream_of_or_within ISO (PMID:28934388) MGI PMID:28934388 NCBI chrNW_004955418:4,316,790...4,342,748
Ensembl chrNW_004955418:4,316,790...4,341,973 		JBrowse link
G Usp30 ubiquitin specific peptidase 30 involved_in ISO (PMID:25621951)
(PMID:24896179)		 UniProt PMID:24896179 PMID:25621951 NCBI chrNW_004955455:10,234,779...10,257,959
Ensembl chrNW_004955455:10,192,426...10,257,951 		JBrowse link
mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl interactor 2 involved_in ISO (PMID:38081847) UniProt PMID:38081847 NCBI chrNW_004955457:11,451,851...11,562,692
Ensembl chrNW_004955457:11,451,851...11,562,696 		JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:21753002)
(PMID:25215947)		 ParkinsonsUK-UCL PMID:21753002 PMID:25215947 NCBI chrNW_004955422:1,455,392...1,644,368
Ensembl chrNW_004955422:1,455,380...1,644,452 		JBrowse link
G Arfip2 ARF interacting protein 2 involved_in ISO (PMID:33773106) UniProt PMID:33773106 NCBI chrNW_004955414:22,209,515...22,214,353
Ensembl chrNW_004955414:22,209,515...22,214,353 		JBrowse link
G Arhgap26 Rho GTPase activating protein 26 involved_in ISO (PMID:38081847) UniProt PMID:38081847 NCBI chrNW_004955415:10,635,410...11,066,551
Ensembl chrNW_004955415:10,637,036...11,066,942 		JBrowse link
G Atg13 autophagy related 13 involved_in ISO (PMID:21855797) ParkinsonsUK-UCL PMID:21855797 NCBI chrNW_004955422:1,398,646...1,432,440
Ensembl chrNW_004955422:1,398,593...1,432,438 		JBrowse link
G Atg14 autophagy related 14 involved_in ISO (PMID:23878393) ParkinsonsUK-UCL PMID:23878393 NCBI chrNW_004955466:13,898,311...13,972,506
Ensembl chrNW_004955466:13,898,298...13,972,506 		JBrowse link
G Atg4b autophagy related 4B cysteine peptidase involved_in ISO (PMID:33773106) UniProt PMID:33773106 NCBI chrNW_004955542:164,969...192,498
Ensembl chrNW_004955542:166,365...193,006 		JBrowse link
G Atg4d autophagy related 4D cysteine peptidase involved_in ISO (PMID:33773106) UniProt PMID:33773106 NCBI chrNW_004955495:1,739,982...1,746,362
Ensembl chrNW_004955495:1,739,982...1,746,362 		JBrowse link
G Atg7 autophagy related 7 involved_in ISO (PMID:19279012)
(PMID:20080761)		 ParkinsonsUK-UCL PMID:19279012 PMID:20080761 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236 		JBrowse link
G Bcl2l13 BCL2 like 13 acts_upstream_of_or_within ISO (PMID:31266807) MGI PMID:31266807 NCBI chrNW_004955454:5,692,027...5,770,897
Ensembl chrNW_004955454:5,715,991...5,769,443 		JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:23878393), (PMID:25215947) ParkinsonsUK-UCL PMID:23878393 PMID:25215947 NCBI chrNW_004955451:16,616,595...16,625,731
Ensembl chrNW_004955451:16,616,595...16,625,730 		JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:22505714) FlyBase PMID:22505714 NCBI chrNW_004955477:9,621,812...9,630,406
Ensembl chrNW_004955477:9,621,812...9,638,099 		JBrowse link
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:35604110) DisProt PMID:35604110 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703 		JBrowse link
G Ctsk cathepsin K involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chrNW_004955588:149,036...158,093
Ensembl chrNW_004955588:148,748...158,093 		JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in ISO (PMID:38340717) UniProt PMID:38340717 NCBI chrNW_004955466:2,838,785...2,855,443
Ensembl chrNW_004955466:2,838,785...2,855,172 		JBrowse link
G Fundc1 FUN14 domain containing 1 involved_in ISO (PMID:34244144) FlyBase PMID:34244144 NCBI chrNW_004955516:3,648,629...3,664,032
Ensembl chrNW_004955516:3,648,629...3,664,032 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:23707074) MGI PMID:23707074 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376 		JBrowse link
G Lrba LPS responsive beige-like anchor protein involved_in ISO (PMID:33773106) UniProt PMID:33773106 NCBI chrNW_004955471:5,052,535...5,649,696
Ensembl chrNW_004955471:5,053,487...5,649,476 		JBrowse link
G Map1lc3b microtubule associated protein 1 light chain 3 beta involved_in ISO (PMID:28017329)
(PMID:19279012)		 UniProt
ParkinsonsUK-UCL		 PMID:19279012 PMID:28017329 NCBI chrNW_004955541:1,852,388...1,868,194 JBrowse link
G Nipsnap1 nipsnap homolog 1 involved_in ISO (PMID:30982665) UniProt PMID:30982665 NCBI chrNW_004955455:3,796,445...3,815,290
Ensembl chrNW_004955455:3,795,413...3,815,289 		JBrowse link
G Nipsnap2 nipsnap homolog 2 involved_in ISO (PMID:30982665) UniProt PMID:30982665 NCBI chrNW_004955456:8,176,171...8,195,576
Ensembl chrNW_004955456:8,176,168...8,195,576 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in ISO (PMID:33406421) ARUK-UCL PMID:33406421 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169 		JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:28017329) UniProt PMID:28017329 NCBI chrNW_004955413:4,557,969...4,563,697
Ensembl chrNW_004955413:4,558,259...4,563,582 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:33406421)
(PMID:38081847)		 ARUK-UCL
RGD
UniProt		 PMID:25154397 PMID:33406421 PMID:38081847 RGD:12904014 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 ISO PMID:20457763
(PMID:23685073), (PMID:28017329)
(PMID:24949970)		 ParkinsonsUK-UCL
UniProt
MGI		 PMID:20457763 PMID:23685073 PMID:24949970 PMID:28017329 RGD:10047224 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152 		JBrowse link
G Retreg1 reticulophagy regulator 1 acts_upstream_of_or_within ISO (PMID:31446166) MGI PMID:31446166 NCBI chrNW_004955426:5,574,207...5,688,236
Ensembl chrNW_004955426:5,574,216...5,688,236 		JBrowse link
G Rimoc1 RAB7A interacting MON1-CCZ1 complex subunit 1 involved_in ISO (PMID:34432599) UniProt PMID:34432599 NCBI chrNW_004955426:26,026,284...26,040,311
Ensembl chrNW_004955426:26,026,290...26,040,311 		JBrowse link
G Spata33 spermatogenesis associated 33 involved_in ISO (PMID:33087875) UniProt PMID:33087875 NCBI chrNW_004955541:3,223,552...3,232,837 JBrowse link
G Sqstm1 sequestosome 1 involved_in ISO (PMID:20457763) ParkinsonsUK-UCL PMID:20457763 NCBI chrNW_004955408:757,426...764,989
Ensembl chrNW_004955408:757,426...771,615 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:33096711)
(PMID:25919711)		 UniProt PMID:25919711 PMID:33096711 NCBI chrNW_004955580:915,668...921,703
Ensembl chrNW_004955580:915,188...922,791 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of ISO (PMID:22044588) MGI PMID:22044588 NCBI chrNW_004955413:2,129,719...2,153,873
Ensembl chrNW_004955413:2,129,678...2,154,380 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of ISO (PMID:22044588) MGI PMID:22044588 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (PMID:21855797) ParkinsonsUK-UCL PMID:21855797 NCBI chrNW_004955482:760,200...777,133
Ensembl chrNW_004955482:761,811...777,133 		JBrowse link
mitophagy by internal vacuole formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata18 spermatogenesis associated 18 involved_in ISO (PMID:21264228) UniProt PMID:21264228 NCBI chrNW_004955447:18,401,881...18,437,878 JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) ParkinsonsUK-UCL PMID:19279012 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125 		JBrowse link
G Rnf41 ring finger protein 41 acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chrNW_004955458:3,799,450...3,833,269
Ensembl chrNW_004955458:3,799,450...3,833,263 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (PMID:22044588) MGI PMID:22044588 NCBI chrNW_004955413:2,129,719...2,153,873
Ensembl chrNW_004955413:2,129,678...2,154,380 		JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (PMID:22044588) MGI PMID:22044588 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928 		JBrowse link
G Tspo translocator protein involved_in ISO (PMID:25470454) ParkinsonsUK-UCL PMID:25470454 NCBI chrNW_004955413:28,309,105...28,315,075
Ensembl chrNW_004955413:28,308,658...28,315,075 		JBrowse link
G Usp30 ubiquitin specific peptidase 30 ISO RGD PMID:24896179 RGD:13208875 NCBI chrNW_004955455:10,234,779...10,257,959
Ensembl chrNW_004955455:10,192,426...10,257,951 		JBrowse link
negative regulation of type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htra2 HtrA serine peptidase 2 involved_in ISO (PMID:24709290) ParkinsonsUK-UCL PMID:24709290 NCBI chrNW_004955424:11,255,756...11,259,170
Ensembl chrNW_004955424:11,255,756...11,259,170 		JBrowse link
G Vps13c vacuolar protein sorting 13 homolog C involved_in ISO (PMID:26942284) ParkinsonsUK-UCL PMID:26942284 NCBI chrNW_004955450:13,016,933...13,178,797
Ensembl chrNW_004955450:13,016,950...13,174,990 		JBrowse link
positive regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 ISO RGD PMID:23698117 RGD:11561968 NCBI chrNW_004955477:9,621,812...9,630,406
Ensembl chrNW_004955477:9,621,812...9,638,099 		JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:30217973) UniProt PMID:30217973 NCBI chrNW_004955422:1,455,392...1,644,368
Ensembl chrNW_004955422:1,455,380...1,644,452 		JBrowse link
G Atg7 autophagy related 7 ISO RGD PMID:37042059 RGD:407532700 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236 		JBrowse link
G Cers1 ceramide synthase 1 involved_in ISO (PMID:22922758) UniProt PMID:22922758 NCBI chrNW_004955524:2,788,672...2,798,068
Ensembl chrNW_004955524:2,788,653...2,796,370 		JBrowse link
G Dele1 DAP3 binding cell death enhancer 1 involved_in ISO (PMID:38340717) UniProt PMID:38340717 NCBI chrNW_004955415:11,851,023...11,869,905
Ensembl chrNW_004955415:11,854,526...11,869,777 		JBrowse link
G Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 involved_in ISO (PMID:38340717) UniProt PMID:38340717 NCBI chrNW_004955460:13,723,674...13,754,545
Ensembl chrNW_004955460:13,723,777...13,754,150 		JBrowse link
G Fbxo7 F-box protein 7 involved_in ISO (PMID:26310625) ParkinsonsUK-UCL PMID:26310625 RGD:11536096 NCBI chrNW_004955405:41,429,421...41,449,670
Ensembl chrNW_004955405:41,433,082...41,453,909 		JBrowse link
G Htt huntingtin involved_in ISO (PMID:25686248) ParkinsonsUK-UCL PMID:25686248 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:21102437), (PMID:32939830)
(PMID:33510463)		 UniProt PMID:21102437 PMID:32939830 PMID:33510463 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:31919280) UniProt PMID:31919280 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:26310625) RGD
ParkinsonsUK-UCL		 PMID:26310625 PMID:28608965 RGD:13432560 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152 		JBrowse link
G Slc25a4 solute carrier family 25 member 4 involved_in ISO (PMID:31618756) UniProt PMID:31618756 NCBI chrNW_004955403:23,878,329...23,882,322
Ensembl chrNW_004955403:23,878,329...23,882,322 		JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in ISO (PMID:31618756) UniProt PMID:31618756 NCBI chrNW_004955534:497,518...500,309
Ensembl chrNW_004955534:496,933...510,934 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO PMID:29934347 UniProt PMID:29934347 RGD:405650300 NCBI chrNW_004955442:16,521,130...16,523,733
Ensembl chrNW_004955442:16,521,130...16,523,468 		JBrowse link
G Ube2a ubiquitin conjugating enzyme E2 A involved_in ISO (PMID:23685073) UniProt PMID:23685073 NCBI chrNW_004955534:411,602...485,964
Ensembl chrNW_004955534:409,947...421,888 		JBrowse link
G Vps13d vacuolar protein sorting 13 homolog D involved_in ISO (PMID:29307555) UniProt PMID:29307555 NCBI chrNW_004955486:1,515,630...1,772,107
Ensembl chrNW_004955486:1,513,712...1,767,956 		JBrowse link
positive regulation of type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) ParkinsonsUK-UCL PMID:24005319 NCBI chrNW_004955452:7,372,917...7,375,072
Ensembl chrNW_004955452:7,373,001...7,375,856 		JBrowse link
G Cdc37 cell division cycle 37, HSP90 cochaperone involved_in ISO (PMID:21855797) ParkinsonsUK-UCL PMID:21855797 NCBI chrNW_004955495:1,642,467...1,651,288
Ensembl chrNW_004955495:1,641,236...1,651,288 		JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:23707074) ARUK-UCL PMID:23707074 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376 		JBrowse link
G Hdac6 histone deacetylase 6 involved_in ISO (PMID:20457763) ParkinsonsUK-UCL PMID:20457763 NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071 		JBrowse link
G Hk2 hexokinase 2 involved_in ISO (PMID:23962723) ParkinsonsUK-UCL PMID:23962723 NCBI chrNW_004955424:10,897,528...10,966,025
Ensembl chrNW_004955424:10,897,485...10,966,025 		JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISO (PMID:30217973) CACAO PMID:30217973 NCBI chrNW_004955475:550,643...671,771
Ensembl chrNW_004955475:551,159...671,747 		JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in ISO (PMID:24709290) ParkinsonsUK-UCL PMID:24709290 NCBI chrNW_004955452:1,059,168...1,066,096
Ensembl chrNW_004955452:1,058,930...1,066,096 		JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:20871098) ParkinsonsUK-UCL PMID:20871098 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:20457763)
(PMID:20871098), (PMID:23212910)		 ParkinsonsUK-UCL PMID:20457763 PMID:20871098 PMID:23212910 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152 		JBrowse link
G Tomm7 translocase of outer mitochondrial membrane 7 involved_in ISO (PMID:24270810) ParkinsonsUK-UCL PMID:24270810 NCBI chrNW_004955410:25,157,860...25,166,898
Ensembl chrNW_004955410:25,157,860...25,166,898 		JBrowse link
G Vdac1 voltage dependent anion channel 1 involved_in ISO (PMID:32047033) UniProt PMID:32047033 NCBI chrNW_004955408:5,260,444...5,275,972
Ensembl chrNW_004955408:5,260,353...5,275,990 		JBrowse link
regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 ISO RGD PMID:31172217 RGD:329403053 NCBI chrNW_004955462:9,196,984...9,278,850
Ensembl chrNW_004955462:9,207,314...9,278,621 		JBrowse link
G Bnip3l BCL2 interacting protein 3 like involved_in ISO (PMID:20200478) ParkinsonsUK-UCL PMID:20200478 NCBI chrNW_004955403:49,122,408...49,144,162
Ensembl chrNW_004955403:49,122,408...49,144,998 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chrNW_004955433:15,677,788...15,718,894
Ensembl chrNW_004955433:15,674,116...15,718,894 		JBrowse link
G Cttn cortactin involved_in ISO (PMID:20457763) ParkinsonsUK-UCL PMID:20457763 NCBI chrNW_004955422:15,838,036...15,874,067
Ensembl chrNW_004955422:15,835,145...15,874,108 		JBrowse link
G Dnm1l dynamin 1 like involved_in ISO (PMID:19279012) ParkinsonsUK-UCL PMID:19279012 NCBI chrNW_004955505:3,025,742...3,081,491
Ensembl chrNW_004955505:3,023,018...3,081,680 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881 		JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 involved_in ISO (PMID:28381481), (PMID:31908024) DisProt PMID:28381481 PMID:31908024 NCBI chrNW_004955524:3,037,825...3,044,296
Ensembl chrNW_004955524:3,036,953...3,044,296 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chrNW_004955457:7,282,403...7,288,918
Ensembl chrNW_004955457:7,282,403...7,288,918 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chrNW_004955555:668,641...676,351
Ensembl chrNW_004955555:667,973...676,351 		JBrowse link
G Parl presenilin associated rhomboid like involved_in ISO (PMID:21355049) ParkinsonsUK-UCL PMID:21355049 NCBI chrNW_004955420:23,549,125...23,581,782
Ensembl chrNW_004955420:23,548,672...23,582,137 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chrNW_004955577:171,425...183,669
Ensembl chrNW_004955577:171,425...186,046 		JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chrNW_004955413:27,271,717...27,326,655
Ensembl chrNW_004955413:27,271,953...27,326,759 		JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chrNW_004955506:3,824,598...3,861,919
Ensembl chrNW_004955506:3,824,556...3,862,098 		JBrowse link
G Vdac1 voltage dependent anion channel 1 involved_in ISO (PMID:25470454) ParkinsonsUK-UCL PMID:25470454 NCBI chrNW_004955408:5,260,444...5,275,972
Ensembl chrNW_004955408:5,260,353...5,275,990 		JBrowse link
type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac6 histone deacetylase 6 involved_in ISO (PMID:20457763) ParkinsonsUK-UCL PMID:20457763 NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071 		JBrowse link
G Mfn2 mitofusin 2 involved_in ISO (PMID:23620051) ParkinsonsUK-UCL PMID:23620051 NCBI chrNW_004955486:1,937,873...1,962,577
Ensembl chrNW_004955486:1,937,802...1,962,772 		JBrowse link
G Optn optineurin involved_in ISO (PMID:25294927) ParkinsonsUK-UCL PMID:25294927 NCBI chrNW_004955462:1,098,118...1,150,291
Ensembl chrNW_004955462:1,107,510...1,151,269 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:19029340) ParkinsonsUK-UCL PMID:19029340 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152 		JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO (PMID:22020285) ParkinsonsUK-UCL PMID:22020285 NCBI chrNW_004955460:14,774,545...14,860,783
Ensembl chrNW_004955460:14,774,545...14,802,879 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12572
    cellular process 12010
      process utilizing autophagic mechanism 458
        autophagy 458
          autophagy of mitochondrion 81
            micromitophagy 0
            mitophagy + 74
            mitophagy by internal vacuole formation 1
            negative regulation of autophagy of mitochondrion + 9
            positive regulation of autophagy of mitochondrion + 26
            regulation of autophagy of mitochondrion + 47
Path 2
Term Annotations click to browse term
  biological_process 12572
    cellular process 12010
      metabolic process 7974
        catabolic process 1974
          autophagy 458
            autophagy of mitochondrion 81
              micromitophagy 0
              mitophagy + 74
              mitophagy by internal vacuole formation 1
              negative regulation of autophagy of mitochondrion + 9
              positive regulation of autophagy of mitochondrion + 26
              regulation of autophagy of mitochondrion + 47
paths to the root