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ONTOLOGY REPORT - ANNOTATIONS

Term:mRNA splicing, via spliceosome
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Accession:GO:0000398 term browser browse the term
Definition:The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
Comment:Note that although the many U12-type introns have the sequence AT-AC at the intron termini, some introns with these terminal sequences are spliced by the U2-type spliceosome. The distinguishing characteristics are sequences near the 5' splice site and the branch point sequences of the intron. Note that although the majority of U2-type introns have the sequence GU-AG at the intron termini, some introns with these terminal sequences are spliced by the U12-type spliceosome. The distinguishing characteristics are sequences near the 5' splice site and the branch point sequences of the intron.
Synonyms:exact_synonym: nuclear mRNA splicing, via spliceosome
 narrow_synonym: nuclear mRNA splicing via U12-type spliceosome;   nuclear mRNA splicing via U2-type spliceosome
 broad_synonym: mRNA splicing;   pre-mRNA splicing
 related_synonym: splicing AT-AC intron;   splicing GT-AG intron
 alt_id: GO:0006374;   GO:0006375


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mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqr aquarius involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:113,931,642...114,005,788
Ensembl chr 2:113,931,651...114,017,505 		JBrowse link
G BC005624 cDNA sequence BC005624 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:30,862,845...30,872,225
Ensembl chr 2:30,862,189...30,872,213 		JBrowse link
G Bcas2 BCAS2 pre-mRNA processing factor involved_in NAS
ISO		 (MGI:6872267|PMID:23742842) ComplexPortal
MGI		 PMID:23742842 GO_REF:0000119 MGI:4834177 MGI:6872267 NCBI chr 3:103,078,971...103,086,479
Ensembl chr 3:103,078,971...103,086,482 		JBrowse link
G Bud13 BUD13 homolog involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:46,194,281...46,210,084
Ensembl chr 9:46,194,306...46,210,408 		JBrowse link
G Bud31 BUD31 homolog involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:145,077,186...145,084,888
Ensembl chr 5:145,077,172...145,084,888 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:81,156,937...81,162,085
Ensembl chr10:81,156,937...81,162,076 		JBrowse link
G Casc3 exon junction complex subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:98,700,634...98,724,633
Ensembl chr11:98,695,731...98,724,640 		JBrowse link
G Cdc40 cell division cycle 40 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:40,707,617...40,759,139
Ensembl chr10:40,707,617...40,759,307 		JBrowse link
G Cdc5l cell division cycle 5-like involved_in NAS
IBA
ISO		 (MGI:6872267|PMID:23742842) ComplexPortal
GO_Central
MGI		 PMID:23742842 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6872267 NCBI chr17:45,702,809...45,744,633
Ensembl chr17:45,702,810...45,744,663 		JBrowse link
G Cdc5lrt1 cell division cycle 5 like, retrotransposed 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:118,074,241...118,076,700
Ensembl chr10:118,074,277...118,076,685 		JBrowse link
G Cdc5lrt10 cell division cycle 5 like, retrotransposed 10 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:118,187,324...118,190,025
Ensembl chr10:118,187,602...118,190,010 		JBrowse link
G Cdc5lrt4 cell division cycle 5 like, retrotransposed 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:118,094,577...118,097,037
Ensembl chr10:118,094,593...118,097,001 		JBrowse link
G Cdc5lrt5 cell division cycle 5 like, retrotransposed 5 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:118,160,141...118,162,889
Ensembl chr10:118,160,466...118,162,874 		JBrowse link
G Cdc5lrt6 cell division cycle 5 like, retrotransposed 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:118,165,876...118,168,330
Ensembl chr10:118,165,905...118,168,313 		JBrowse link
G Cdc5lrt7 cell division cycle 5 like, retrotransposed 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:118,171,007...118,173,751
Ensembl chr10:118,171,328...118,173,736 		JBrowse link
G Cdc5lrt8 cell division cycle 5 like, retrotransposed 8 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:118,176,721...118,179,175
Ensembl chr10:118,176,752...118,179,160 		JBrowse link
G Cdc5lrt9 cell division cycle 5 like, retrotransposed 9 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:118,182,150...118,184,599
Ensembl chr10:118,182,176...118,184,584 		JBrowse link
G Cenatac centrosomal AT-AC splicing factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:44,321,456...44,329,390
Ensembl chr 9:44,321,456...44,329,866 		JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:12084575) MGI
GO_Central		 PMID:12084575 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:145,759,402...145,776,620
Ensembl chr 2:145,759,399...145,776,934 		JBrowse link
G Ctnnbl1 catenin, beta like 1 involved_in NAS (MGI:6872267|PMID:23742842) ComplexPortal PMID:23742842 MGI:6872267 NCBI chr 2:157,579,321...157,733,823
Ensembl chr 2:157,579,321...157,733,534 		JBrowse link
G Cwc15 CWC15 spliceosome-associated protein involved_in NAS
ISO		 (MGI:6872267|PMID:23742842) ComplexPortal
MGI		 PMID:23742842 GO_REF:0000119 MGI:4834177 MGI:6872267 NCBI chr 9:14,411,876...14,421,920
Ensembl chr 9:14,411,913...14,421,873 		JBrowse link
G Cwc22 CWC22 spliceosome-associated protein involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:77,706,312...77,776,705
Ensembl chr 2:77,711,503...77,776,719 		JBrowse link
G Cwc22rt1 CWC22 spliceosome-associated protein, retrotransposed 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:83,785,949...83,789,002
Ensembl chr 2:83,786,037...83,788,529 		JBrowse link
G Cwc22rt2 CWC22 spliceosome-associated protein, retrotransposed 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:83,791,759...83,794,812
Ensembl chr 2:83,791,847...83,794,339 		JBrowse link
G Cwc22rt3 CWC22 spliceosome-associated protein, retrotransposed 3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:83,797,569...83,800,622
Ensembl chr 2:83,797,657...83,800,149 		JBrowse link
G Cwc22rt4 CWC22 spliceosome-associated protein, retrotransposed 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:83,803,379...83,806,432
Ensembl chr 2:83,803,467...83,805,959 		JBrowse link
G Cwc22rt5 CWC22 spliceosome-associated protein, retrotransposed 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:83,809,189...83,812,242
Ensembl chr 2:83,809,277...83,811,769 		JBrowse link
G Cwc22rt6 CWC22 spliceosome-associated protein, retrotransposed 6 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:83,820,809...83,823,862
Ensembl chr 2:83,820,897...83,823,389 		JBrowse link
G Cwc22rt7 CWC22 spliceosome-associated protein, retrotransposed 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:83,814,999...83,818,052
Ensembl chr 2:83,815,087...83,817,579 		JBrowse link
G Cwc25 CWC25 spliceosome-associated protein involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:97,636,296...97,657,439
Ensembl chr11:97,636,307...97,657,382 		JBrowse link
G Cwf19l1 CWF19 like cell cycle control factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:44,097,076...44,124,324
Ensembl chr19:44,097,076...44,124,315 		JBrowse link
G Cwf19l2 CWF19 like cell cycle control factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:3,403,592...3,479,236
Ensembl chr 9:3,403,592...3,479,236 		JBrowse link
G Dbr1 debranching RNA lariats 1 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:10982890) MGI
GO_Central		 PMID:10982890 GO_REF:0000033 NCBI chr 9:99,457,839...99,467,060
Ensembl chr 9:99,457,852...99,466,554 		JBrowse link
G Ddx23 DEAD box helicase 23 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:98,543,012...98,560,808
Ensembl chr15:98,543,015...98,560,775 		JBrowse link
G Ddx39a DEAD box helicase 39a involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:84,441,806...84,453,533
Ensembl chr 8:84,441,806...84,453,521 		JBrowse link
G Ddx39b DEAD box helicase 39b involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:35,460,722...35,472,683
Ensembl chr17:35,460,722...35,472,683 		JBrowse link
G Ddx41 DEAD box helicase 41 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:55,678,223...55,684,471
Ensembl chr13:55,678,223...55,684,471 		JBrowse link
G Ddx46 DEAD box helicase 46 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr13:55,782,790...55,829,080
Ensembl chr13:55,782,841...55,829,069 		JBrowse link
G Dhx16 DEAH-box helicase 16 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:36,190,657...36,203,562
Ensembl chr17:36,190,711...36,203,562 		JBrowse link
G Dhx38 DEAH-box helicase 38 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:110,274,631...110,292,493
Ensembl chr 8:110,274,643...110,292,493 		JBrowse link
G Dhx8 DEAH-box helicase 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:101,623,782...101,658,184
Ensembl chr11:101,623,745...101,658,184 		JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:102,729,298...102,771,999
Ensembl chr11:102,729,299...102,771,811 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:119,179,189...119,190,869
Ensembl chr11:119,179,189...119,190,915 		JBrowse link
G Eif4a3l1 eukaryotic translation initiation factor 4A3 like 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:136,304,537...136,306,981
Ensembl chr 6:136,304,537...136,306,981 		JBrowse link
G Eif4a3l2 eukaryotic translation initiation factor 4A3 like 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:116,527,132...116,529,563
Ensembl chr 6:116,528,102...116,529,463 		JBrowse link
G Ess2 ess-2 splicing factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:17,718,573...17,729,225
Ensembl chr16:17,718,573...17,729,212 		JBrowse link
G Fra10ac1 FRA10A associated CGG repeat 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:38,176,925...38,213,078
Ensembl chr19:38,176,929...38,212,604 		JBrowse link
G Gcfc2 GC-rich sequence DNA binding factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:81,887,543...81,936,079
Ensembl chr 6:81,900,650...81,936,896 		JBrowse link
G Gpkow G patch domain and KOW motifs involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr  X:7,563,373...7,576,500
Ensembl chr  X:7,563,370...7,576,501 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:103,148,840...103,155,119
Ensembl chr15:103,148,859...103,155,119 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:51,437,414...51,448,054
Ensembl chr 6:51,437,912...51,446,874 		JBrowse link
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:75,489,416...75,499,751
Ensembl chr 2:75,489,605...75,499,751 		JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:52,310,834...52,341,462
Ensembl chr14:52,310,834...52,341,485 		JBrowse link
G Hspa8 heat shock protein 8 involved_in NAS (MGI:6872267|PMID:23742842) ComplexPortal PMID:23742842 MGI:6872267 NCBI chr 9:40,712,572...40,716,498
Ensembl chr 9:40,712,280...40,721,383 		JBrowse link
G Htatsf1 HIV TAT specific factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:56,098,930...56,112,543
Ensembl chr  X:56,098,943...56,112,543 		JBrowse link
G Ik IK cytokine involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr18:36,877,709...36,890,692
Ensembl chr18:36,877,731...36,890,688 		JBrowse link
G Isy1 ISY1 splicing factor homolog involved_in ISO (PMID:29301961) UniProt PMID:29301961 NCBI chr 6:87,795,429...87,815,723
Ensembl chr 6:87,791,251...87,815,780 		JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:35,200,830...35,204,867
Ensembl chr17:35,200,838...35,204,867 		JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_Central
MGI		 GO_REF:0000008 GO_REF:0000033 NCBI chr 6:91,493,017...91,499,602
Ensembl chr 6:91,492,910...91,499,607 		JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:71,124,663...71,131,402
Ensembl chr 8:71,125,898...71,131,402 		JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:56,678,048...56,681,684
Ensembl chr 6:56,678,048...56,681,695 		JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:79,531,497...79,547,781
Ensembl chr 8:79,531,494...79,547,769 		JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:80,688,659...80,691,043
Ensembl chr10:80,688,655...80,691,043 		JBrowse link
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:18,848,634...18,854,051
Ensembl chr 6:18,848,578...18,855,750 		JBrowse link
G Magohb mago homolog B, exon junction complex core component involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:131,261,351...131,270,207
Ensembl chr 6:131,261,351...131,270,207 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:123,161,944...123,179,639
Ensembl chr 3:123,161,946...123,179,757 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in
NOT|involved_in		 IMP
IDA		 (MGI:5621227|PMID:25569111)
(MGI:6095345|PMID:28637692)		 UniProt PMID:25569111 PMID:28637692 MGI:5621227 MGI:6095345 NCBI chr14:52,532,298...52,548,555
Ensembl chr14:52,532,298...52,542,585 		JBrowse link
G Mfap1a microfibrillar-associated protein 1A involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:121,323,162...121,337,137
Ensembl chr 2:121,322,392...121,337,146 		JBrowse link
G Mfap1b microfibrillar-associated protein 1B involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:121,292,147...121,304,504
Ensembl chr 2:121,290,716...121,304,548 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in NAS (MGI:6870000|PMID:23793891) ComplexPortal PMID:23793891 MGI:6870000 NCBI chr 4:46,138,732...46,172,403
Ensembl chr 4:46,138,613...46,172,403 		JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in NAS
IBA		 (MGI:6870000|PMID:23793891) ComplexPortal
GO_Central		 PMID:23793891 GO_REF:0000033 MGI:6870000 NCBI chr16:31,767,364...31,777,290
Ensembl chr16:31,767,331...31,780,599 		JBrowse link
G Nova1 NOVA alternative splicing regulator 1 involved_in
acts_upstream_of_or_within		 IBA
IDA
IMP		 (PMID:10719891) GO_Central
MGI		 PMID:10719891 GO_REF:0000033 NCBI chr12:46,744,678...46,866,143
Ensembl chr12:46,741,300...46,865,712 		JBrowse link
G Paxbp1 PAX3 and PAX7 binding protein 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr16:90,810,925...90,841,267
Ensembl chr16:90,810,925...90,841,431 		JBrowse link
G Phf5a PHD finger protein 5A involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:81,748,717...81,756,093
Ensembl chr15:81,748,721...81,756,112 		JBrowse link
G Plrg1 pleiotropic regulator 1 involved_in NAS
IBA
ISO		 (MGI:6872267|PMID:23742842) ComplexPortal
GO_Central
MGI		 PMID:23742842 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6872267 NCBI chr 3:82,962,845...82,979,598
Ensembl chr 3:82,962,829...82,979,662 		JBrowse link
G Ppie peptidylprolyl isomerase E (cyclophilin E) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:123,020,907...123,033,783
Ensembl chr 4:123,020,908...123,033,744 		JBrowse link
G Ppil1 peptidylprolyl isomerase (cyclophilin)-like 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:29,469,809...29,482,945
Ensembl chr17:29,469,777...29,483,160 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in NAS
IBA
ISO		 (MGI:6872267|PMID:23742842) ComplexPortal
GO_Central
MGI		 PMID:23742842 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6872267 NCBI chr19:10,872,595...10,886,923
Ensembl chr19:10,872,595...10,886,923 		JBrowse link
G Prpf3 pre-mRNA processing factor 3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 3:95,737,436...95,763,197
Ensembl chr 3:95,737,436...95,763,197 		JBrowse link
G Prpf31 pre-mRNA processing factor 31 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:11867543) MGI
GO_Central		 PMID:11867543 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:3,632,984...3,645,484
Ensembl chr 7:3,632,984...3,645,485 		JBrowse link
G Prpf38a PRP38 pre-mRNA processing factor 38 (yeast) domain containing A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:108,422,064...108,436,533
Ensembl chr 4:108,420,369...108,436,533 		JBrowse link
G Prpf4 pre-mRNA processing factor 4 involved_in
acts_upstream_of_or_within		 ISO
IBA		 MGI
GO_Central		 GO_REF:0000008 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:62,327,002...62,345,227
Ensembl chr 4:62,327,034...62,345,227 		JBrowse link
G Prpf40a pre-mRNA processing factor 40A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:53,024,714...53,081,450
Ensembl chr 2:53,024,716...53,081,714 		JBrowse link
G Prpf40b pre-mRNA processing factor 40B involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:99,192,957...99,214,899
Ensembl chr15:99,192,968...99,214,899 		JBrowse link
G Prpf6 pre-mRNA splicing factor 6 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:181,243,112...181,297,454
Ensembl chr 2:181,233,661...181,297,453 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 involved_in
acts_upstream_of_or_within		 ISO MGI GO_REF:0000008 GO_REF:0000119 MGI:4834177 NCBI chr11:75,377,603...75,400,273
Ensembl chr11:75,377,642...75,400,275 		JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:20,483,596...20,517,128
Ensembl chr  X:20,483,742...20,517,140 		JBrowse link
G Rbm14 RNA binding motif protein 14 involved_in IBA
IDA		 (PMID:31794640) GO_Central
MGI		 PMID:31794640 GO_REF:0000033 NCBI chr19:4,850,594...4,861,662
Ensembl chr19:4,850,597...4,861,662 		JBrowse link
G Rbm19 RNA binding motif protein 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:120,254,578...120,337,036
Ensembl chr 5:120,254,530...120,337,046 		JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:4,834,321...4,844,037
Ensembl chr19:4,834,321...4,843,929 		JBrowse link
G Rbm41 RNA binding motif protein 41 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:138,790,260...138,899,344
Ensembl chr  X:138,790,260...138,899,344 		JBrowse link
G Rbm44 RNA binding motif protein 44 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:91,072,695...91,098,521
Ensembl chr 1:91,072,811...91,098,517 		JBrowse link
G Rbm4b RNA binding motif protein 4B involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:4,806,480...4,816,199
Ensembl chr19:4,806,525...4,817,093 		JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:107,617,694...107,648,228
Ensembl chr 9:107,617,570...107,648,195 		JBrowse link
G Rbm6 RNA binding motif protein 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:107,650,758...107,751,028
Ensembl chr 9:107,650,758...107,750,436 		JBrowse link
G Rbm8a RNA binding motif protein 8a involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:96,537,244...96,541,107
Ensembl chr 3:96,537,249...96,541,107 		JBrowse link
G Rbm8a2 RNA binding motif protein 8A2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:175,805,784...175,806,509
Ensembl chr 1:175,805,343...175,806,680 		JBrowse link
G Rbmx2 RNA binding motif protein, X-linked 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr  X:47,783,881...47,799,596
Ensembl chr  X:47,783,881...47,799,600 		JBrowse link
G Rnf113a1 ring finger protein 113A1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:36,454,875...36,456,120
Ensembl chr  X:36,454,898...36,456,120 		JBrowse link
G Rnf113a2 ring finger protein 113A2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:84,463,974...84,465,352
Ensembl chr12:84,463,970...84,465,352 		JBrowse link
G Rnpc3 RNA-binding region (RNP1, RRM) containing 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:113,398,716...113,423,798
Ensembl chr 3:113,398,716...113,423,798 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:24,633,620...24,644,872
Ensembl chr17:24,633,539...24,644,875 		JBrowse link
G Rsrc1 arginine/serine-rich coiled-coil 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:66,888,694...67,265,736
Ensembl chr 3:66,888,723...67,265,729 		JBrowse link
G Sart1 squamous cell carcinoma antigen recognized by T cells 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:5,427,551...5,438,731
Ensembl chr19:5,427,551...5,438,731 		JBrowse link
G Sart3 squamous cell carcinoma antigen recognized by T cells 3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 5:113,880,505...113,910,461
Ensembl chr 5:113,880,507...113,910,571 		JBrowse link
G Sf1 splicing factor 1 involved_in NAS (MGI:6867147|PMID:17024186) ComplexPortal PMID:17024186 MGI:6867147 NCBI chr19:6,413,952...6,428,060
Ensembl chr19:6,413,720...6,428,060 		JBrowse link
G Sf3a1 splicing factor 3a, subunit 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:4,110,354...4,132,541
Ensembl chr11:4,110,350...4,132,541 		JBrowse link
G Sf3a2 splicing factor 3a, subunit 2 involved_in
acts_upstream_of_or_within		 ISO
TAS		 (PMID:11602354) MGI PMID:11602354 GO_REF:0000119 MGI:4834177 NCBI chr10:80,634,569...80,640,756
Ensembl chr10:80,634,032...80,640,758 		JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:124,602,966...124,626,234
Ensembl chr 4:124,608,569...124,626,253 		JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:23211737)
(PMID:11252167)		 MGI PMID:11252167 PMID:23211737 GO_REF:0000119 MGI:4834177 NCBI chr 1:55,024,328...55,066,660
Ensembl chr 1:55,024,328...55,066,640 		JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:5,323,949...5,345,485
Ensembl chr19:5,323,960...5,345,483 		JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:111,537,123...111,573,578
Ensembl chr 8:111,536,871...111,573,419 		JBrowse link
G Sf3b4 splicing factor 3b, subunit 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:96,079,822...96,084,880
Ensembl chr 3:96,079,648...96,084,880 		JBrowse link
G Sf3b5 splicing factor 3b, subunit 5 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:12,884,194...12,884,927
Ensembl chr10:12,881,087...12,884,927 		JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 involved_in
acts_upstream_of_or_within		 ISO
IMP
IBA		 (PMID:23211737) MGI
GO_Central		 PMID:23211737 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr12:4,867,608...4,877,659
Ensembl chr12:4,867,544...4,877,659 		JBrowse link
G Slu7 SLU7 splicing factor homolog (S. cerevisiae) involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr11:43,324,550...43,338,809
Ensembl chr11:43,324,571...43,338,808 		JBrowse link
G Smu1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:40,735,649...40,757,885
Ensembl chr 4:40,736,542...40,757,923 		JBrowse link
G Snip1 Smad nuclear interacting protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:124,960,465...124,967,836
Ensembl chr 4:124,960,465...124,967,835 		JBrowse link
G Snrnp200 small nuclear ribonucleoprotein 200 (U5) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:127,050,306...127,082,373
Ensembl chr 2:127,050,306...127,082,371 		JBrowse link
G Snrnp25 small nuclear ribonucleoprotein 25 (U11/U12) involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr11:32,155,415...32,158,996
Ensembl chr11:32,155,415...32,158,984 		JBrowse link
G Snrnp35 small nuclear ribonucleoprotein 35 (U11/U12) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:124,621,099...124,631,649
Ensembl chr 5:124,621,197...124,629,187 		JBrowse link
G Snrnp70 small nuclear ribonucleoprotein 70 (U1) involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:45,025,878...45,045,177
Ensembl chr 7:45,025,877...45,045,166 		JBrowse link
G Snrpa small nuclear ribonucleoprotein polypeptide A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:26,886,431...26,895,696
Ensembl chr 7:26,886,430...26,895,696 		JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:65,710,084...65,724,335
Ensembl chr 7:65,708,751...65,724,335 		JBrowse link
G Snrpb small nuclear ribonucleoprotein B involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:130,013,560...130,031,184
Ensembl chr 2:130,013,555...130,021,323 		JBrowse link
G Snrpb2 U2 small nuclear ribonucleoprotein B involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:142,904,989...142,913,972
Ensembl chr 2:142,904,959...142,914,773 		JBrowse link
G Snrpc U1 small nuclear ribonucleoprotein C involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:28,059,002...28,070,942
Ensembl chr17:28,057,124...28,070,942 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:10,617,796...10,628,230
Ensembl chr18:10,617,775...10,642,079 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:18,883,370...18,886,659
Ensembl chr 7:18,883,647...18,887,467 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:75,353,852...75,371,300
Ensembl chr10:75,353,385...75,373,215 		JBrowse link
G Snrpe small nuclear ribonucleoprotein E involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:133,531,609...133,538,018
Ensembl chr 1:133,531,609...133,538,029 		JBrowse link
G Snrpert small nuclear ribonucleoprotein E, pseudogene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:131,163,860...131,164,290
Ensembl chr 2:131,164,008...131,164,286 		JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:93,418,891...93,425,520
Ensembl chr10:93,418,891...93,425,568 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:86,348,522...86,355,884
Ensembl chr 6:86,348,286...86,356,310 		JBrowse link
G Snrpn small nuclear ribonucleoprotein N involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:59,632,243...60,099,925
Ensembl chr 7:59,632,243...59,789,967 		JBrowse link
G Snu13 SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:81,925,546...81,931,799
Ensembl chr15:81,924,726...81,931,799 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:87,496,680...87,519,069
Ensembl chr12:87,495,845...87,519,044 		JBrowse link
G Srrm1 serine/arginine repetitive matrix 1 acts_upstream_of_or_within ISO (PMID:9531537) MGI PMID:9531537 NCBI chr 4:135,047,795...135,080,787
Ensembl chr 4:135,047,795...135,080,632 		JBrowse link
G Srrm2 serine/arginine repetitive matrix 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:24,009,501...24,043,715
Ensembl chr17:24,009,506...24,043,715 		JBrowse link
G Srsf10 serine and arginine-rich splicing factor 10 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:135,582,454...135,597,219
Ensembl chr 4:135,583,058...135,597,219 		JBrowse link
G Srsf2 serine and arginine-rich splicing factor 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:116,740,723...116,744,511
Ensembl chr11:116,740,727...116,743,920 		JBrowse link
G Srsf3 serine and arginine-rich splicing factor 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:29,251,634...29,262,346
Ensembl chr17:29,251,602...29,262,347 		JBrowse link
G Srsf5 serine and arginine-rich splicing factor 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:80,992,308...80,997,277
Ensembl chr12:80,992,278...80,997,281 		JBrowse link
G Srsf7 serine and arginine-rich splicing factor 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:80,507,509...80,514,734
Ensembl chr17:80,507,509...80,514,736 		JBrowse link
G Srsf8 serine and arginine rich splicing factor 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:80,463,181...80,501,728
Ensembl chr  X:80,463,181...80,501,727 		JBrowse link
G Syf2 SYF2 homolog, RNA splicing factor (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:134,658,291...134,664,848
Ensembl chr 4:134,658,209...134,664,859 		JBrowse link
G Tra2a transformer 2 alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:49,220,855...49,241,182
Ensembl chr 6:49,220,858...49,240,967 		JBrowse link
G Tra2b transformer 2 beta involved_in
acts_upstream_of		 ISO
IMP		 (PMID:22194695) MGI PMID:22194695 GO_REF:0000119 MGI:4834177 NCBI chr16:22,063,302...22,084,755
Ensembl chr16:22,063,299...22,084,755 		JBrowse link
G Txnl4a thioredoxin-like 4A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:80,250,041...80,269,066
Ensembl chr18:80,249,980...80,255,956
Ensembl chr18:80,249,980...80,255,956 		JBrowse link
G Txnl4b thioredoxin-like 4B acts_upstream_of_or_within ISO (PMID:15161931) MGI PMID:15161931 NCBI chr 8:110,292,524...110,300,683
Ensembl chr 8:110,292,524...110,300,683 		JBrowse link
G U2af1 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:31,866,055...31,878,122
Ensembl chr17:31,866,055...31,877,866 		JBrowse link
G U2af1l4 U2 small nuclear RNA auxiliary factor 1-like 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:30,262,765...30,264,789
Ensembl chr 7:30,262,726...30,264,790
Ensembl chr 7:30,262,726...30,264,790 		JBrowse link
G U2af2 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 involved_in NAS
ISO		 (MGI:6867147|PMID:17024186) ComplexPortal
MGI		 PMID:17024186 GO_REF:0000119 MGI:4834177 MGI:6867147 NCBI chr 7:5,063,884...5,082,937
Ensembl chr 7:5,065,142...5,082,937 		JBrowse link
G Ubl5 ubiquitin-like 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:20,554,013...20,558,436
Ensembl chr 9:20,554,174...20,558,436 		JBrowse link
G Ubl5b ubiquitin-like 5B involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:87,690,888...87,695,753
Ensembl chr12:87,690,888...87,695,753 		JBrowse link
G Usp39 ubiquitin specific peptidase 39 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:72,295,749...72,322,190
Ensembl chr 6:72,295,661...72,322,167 		JBrowse link
G Usp49 ubiquitin specific peptidase 49 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:47,941,615...47,997,664
Ensembl chr17:47,941,615...47,997,663 		JBrowse link
G Wbp4 WW domain binding protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:79,697,377...79,718,708
Ensembl chr14:79,697,377...79,718,960 		JBrowse link
G Wdr83 WD repeat domain containing 83 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:85,801,664...85,807,375
Ensembl chr 8:85,801,664...85,807,935 		JBrowse link
G Xab2 XPA binding protein 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:3,660,089...3,671,311
Ensembl chr 8:3,658,421...3,671,316 		JBrowse link
G Yju2 YJU2 splicing factor involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr17:56,266,187...56,274,951
Ensembl chr17:56,266,099...56,275,285 		JBrowse link
G Yju2b YJU2 splicing factor homolog B involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 8:84,984,396...84,997,087
Ensembl chr 8:84,984,424...84,997,009 		JBrowse link
G Ythdc1 YTH domain containing 1 involved_in ISO
IBA		 RGD
GO_Central
MGI		 PMID:10564280 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:634512 NCBI chr 5:86,951,349...86,984,518
Ensembl chr 5:86,952,080...86,984,518 		JBrowse link
G Zcrb1 zinc finger CCHC-type and RNA binding motif 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr15:93,283,987...93,296,218
Ensembl chr15:93,283,978...93,296,215 		JBrowse link
G Zmat2 zinc finger, matrin type 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr18:36,926,976...36,932,713
Ensembl chr18:36,926,929...36,932,719 		JBrowse link
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 involved_in ISO
IBA		 RGD
GO_Central		 PMID:33691379 GO_REF:0000033 RGD:151232289 NCBI chr  X:162,719,268...162,741,662
Ensembl chr  X:162,718,439...162,741,657 		JBrowse link
G Zrsr2-ps1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2, pseudogene 1 involved_in IMP
IBA		 (MGI:6192413|PMID:29617656) UniProt
GO_Central		 PMID:29617656 GO_REF:0000033 MGI:6192413 NCBI chr11:22,922,019...22,926,500
Ensembl chr11:22,923,228...22,924,514 		JBrowse link
alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk13 cyclin dependent kinase 13 involved_in IDA (MGI:3699439|PMID:17261272) UniProt PMID:17261272 MGI:3699439 NCBI chr13:17,885,309...17,979,960
Ensembl chr13:17,884,900...17,979,682 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within ISO (PMID:19720736) MGI PMID:19720736 NCBI chr18:25,610,677...25,887,577
Ensembl chr18:25,610,689...25,887,214 		JBrowse link
G Ddx17 DEAD box helicase 17 involved_in IMP
IBA
ISO		 (MGI:5883203|PMID:24910439) UniProt
GO_Central
MGI		 PMID:24910439 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5883203 NCBI chr15:79,411,897...79,430,976
Ensembl chr15:79,411,937...79,430,942 		JBrowse link
G Ddx5 DEAD box helicase 5 involved_in IMP
IBA
ISO		 (MGI:5883203|PMID:24910439) UniProt
GO_Central
MGI		 PMID:24910439 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5883203 NCBI chr11:106,671,181...106,680,011
Ensembl chr11:106,671,181...106,680,011 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:153,331,506...153,363,464
Ensembl chr 1:153,331,504...153,363,406 		JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 acts_upstream_of_or_within IGI (PMID:26371508) MGI PMID:26371508 NCBI chr 4:11,331,933...11,386,783
Ensembl chr 4:11,331,933...11,386,783 		JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 acts_upstream_of_or_within IGI (PMID:26371508) MGI PMID:26371508 NCBI chr 8:106,856,658...106,863,825
Ensembl chr 8:106,856,951...106,863,606 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 acts_upstream_of_or_within IDA (PMID:15798186) MGI PMID:15798186 NCBI chr15:103,148,840...103,155,119
Ensembl chr15:103,148,859...103,155,119 		JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:33,865,207...33,904,432
Ensembl chr17:33,865,207...33,905,834 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:178,148,673...178,170,063
Ensembl chr 1:178,148,673...178,165,362 		JBrowse link
G Hnrnpul1 heterogeneous nuclear ribonucleoprotein U-like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:25,420,586...25,455,695
Ensembl chr 7:25,420,590...25,454,182 		JBrowse link
G Hnrnpul2 heterogeneous nuclear ribonucleoprotein U-like 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:8,796,765...8,811,507
Ensembl chr19:8,797,374...8,811,507 		JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 acts_upstream_of_or_within IMP
ISO		 (PMID:19720736)
(PMID:19075228)		 MGI PMID:19075228 PMID:19720736 GO_REF:0000008 NCBI chr 3:60,380,209...60,537,171
Ensembl chr 3:60,380,251...60,537,171 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in NAS (MGI:6869999|PMID:21536667) ComplexPortal PMID:21536667 MGI:6869999 NCBI chr 4:46,138,732...46,172,403
Ensembl chr 4:46,138,613...46,172,403 		JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in NAS (MGI:6869999|PMID:21536667) ComplexPortal PMID:21536667 MGI:6869999 NCBI chr16:31,767,364...31,777,290
Ensembl chr16:31,767,331...31,780,599 		JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in IMP
IBA
ISO		 (MGI:5477858|PMID:23512658) UniProt
GO_Central
MGI		 PMID:23512658 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5477858 NCBI chr  X:7,760,759...7,765,469
Ensembl chr  X:7,760,758...7,765,508 		JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:75,942,031...75,954,386
Ensembl chr15:75,942,031...75,952,773 		JBrowse link
G Rbm17 RNA binding motif protein 17 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:11,590,250...11,608,061
Ensembl chr 2:11,590,248...11,608,964 		JBrowse link
G Rsrc1 arginine/serine-rich coiled-coil 1 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:15798186) MGI
GO_Central		 PMID:15798186 GO_REF:0000033 NCBI chr 3:66,888,694...67,265,736
Ensembl chr 3:66,888,723...67,265,729 		JBrowse link
G Scnm1 sodium channel modifier 1 involved_in IMP (MGI:3770352|PMID:17656373) UniProt PMID:17656373 MGI:3770352 NCBI chr 3:95,037,030...95,041,285
Ensembl chr 3:95,036,847...95,041,322 		JBrowse link
G Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 4:126,914,504...126,944,894
Ensembl chr 4:126,915,117...126,930,806 		JBrowse link
G Sfswap splicing factor SWAP acts_upstream_of_or_within IDA (PMID:8940107) MGI PMID:8940107 NCBI chr 5:129,578,286...129,648,448
Ensembl chr 5:129,578,285...129,648,448 		JBrowse link
G Slu7 SLU7 splicing factor homolog (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:43,324,550...43,338,809
Ensembl chr11:43,324,571...43,338,808 		JBrowse link
G Srsf1 serine and arginine-rich splicing factor 1 involved_in ISO
IBA		 RGD
GO_Central
MGI		 PMID:23462647 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 RGD:11038736 NCBI chr11:87,937,325...87,944,583
Ensembl chr11:87,938,199...87,944,581 		JBrowse link
G Srsf6 serine and arginine-rich splicing factor 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:162,773,428...162,779,041
Ensembl chr 2:162,773,448...162,779,041 		JBrowse link
G Srsf9 serine and arginine-rich splicing factor 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:115,465,236...115,471,139
Ensembl chr 5:115,465,236...115,471,139 		JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in IMP
ISO		 (PMID:33230114) MGI PMID:33230114 NCBI chr 6:137,712,080...137,728,928
Ensembl chr 6:137,712,076...137,728,930 		JBrowse link
generation of catalytic spliceosome for first transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xab2 XPA binding protein 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:3,660,089...3,671,311
Ensembl chr 8:3,658,421...3,671,316 		JBrowse link
generation of catalytic spliceosome for second transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isy1 ISY1 splicing factor homolog involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:87,795,429...87,815,723
Ensembl chr 6:87,791,251...87,815,780 		JBrowse link
G Prpf18 pre-mRNA processing factor 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:4,626,869...4,656,946
Ensembl chr 2:4,626,869...4,656,924 		JBrowse link
mRNA 3'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isy1 ISY1 splicing factor homolog involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:87,795,429...87,815,723
Ensembl chr 6:87,791,251...87,815,780 		JBrowse link
G Slu7 SLU7 splicing factor homolog (S. cerevisiae) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:43,324,550...43,338,809
Ensembl chr11:43,324,571...43,338,808 		JBrowse link
mRNA 5'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prpf39 pre-mRNA processing factor 39 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:65,083,094...65,110,160
Ensembl chr12:65,083,107...65,110,160 		JBrowse link
G Psip1 PC4 and SFRS1 interacting protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:83,373,917...83,404,700
Ensembl chr 4:83,373,917...83,404,696 		JBrowse link
G Sfswap splicing factor SWAP acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:8940107) MGI
GO_Central		 PMID:8940107 GO_REF:0000033 NCBI chr 5:129,578,286...129,648,448
Ensembl chr 5:129,578,285...129,648,448 		JBrowse link
G Snrpc U1 small nuclear ribonucleoprotein C involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:28,059,002...28,070,942
Ensembl chr17:28,057,124...28,070,942 		JBrowse link
G Srsf1 serine and arginine-rich splicing factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:87,937,325...87,944,583
Ensembl chr11:87,938,199...87,944,581 		JBrowse link
G Srsf12 serine and arginine-rich splicing factor 12 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:33,208,991...33,233,344
Ensembl chr 4:33,208,991...33,233,340 		JBrowse link
mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BC005624 cDNA sequence BC005624 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:30,862,845...30,872,225
Ensembl chr 2:30,862,189...30,872,213 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:81,156,937...81,162,085
Ensembl chr10:81,156,937...81,162,076 		JBrowse link
G Clns1a chloride channel, nucleotide-sensitive, 1A involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:97,345,864...97,370,000
Ensembl chr 7:97,345,841...97,370,003 		JBrowse link
G Cwc15 CWC15 spliceosome-associated protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:14,411,876...14,421,920
Ensembl chr 9:14,411,913...14,421,873 		JBrowse link
G Dcps decapping enzyme, scavenger involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:35,035,710...35,087,283
Ensembl chr 9:35,035,704...35,087,357 		JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr16:31,767,364...31,777,290
Ensembl chr16:31,767,331...31,780,599 		JBrowse link
G Prpf40a pre-mRNA processing factor 40A involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:53,024,714...53,081,450
Ensembl chr 2:53,024,716...53,081,714 		JBrowse link
G Prpf40b pre-mRNA processing factor 40B involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr15:99,192,957...99,214,899
Ensembl chr15:99,192,968...99,214,899 		JBrowse link
G Prpf4b pre-mRNA processing factor 4B involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr13:35,058,803...35,090,047
Ensembl chr13:35,059,285...35,090,047 		JBrowse link
G Rbm17 RNA binding motif protein 17 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 2:11,590,250...11,608,061
Ensembl chr 2:11,590,248...11,608,964 		JBrowse link
G Rbm22 RNA binding motif protein 22 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:60,693,858...60,705,801
Ensembl chr18:60,693,808...60,705,882 		JBrowse link
G Sart1 squamous cell carcinoma antigen recognized by T cells 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:5,427,551...5,438,731
Ensembl chr19:5,427,551...5,438,731 		JBrowse link
G Sde2 SDE2 telomere maintenance homolog (S. pombe) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:180,678,716...180,695,678
Ensembl chr 1:180,678,692...180,695,678 		JBrowse link
G Sf3a1 splicing factor 3a, subunit 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr11:4,110,354...4,132,541
Ensembl chr11:4,110,350...4,132,541 		JBrowse link
G Wbp4 WW domain binding protein 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:79,697,377...79,718,708
Ensembl chr14:79,697,377...79,718,960 		JBrowse link
mRNA splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within		 ISO
IDA
IBA		 (PMID:11158314) MGI
GO_Central		 PMID:11158314 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:90,770,604...90,849,842
Ensembl chr 2:90,770,727...90,849,842 		JBrowse link
G Celf2 CUGBP, Elav-like family member 2 involved_in
acts_upstream_of_or_within		 ISO
IDA
IBA		 (PMID:11158314) MGI
GO_Central		 PMID:11158314 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:6,544,505...7,401,345
Ensembl chr 2:6,544,505...7,514,374 		JBrowse link
G Celf3 CUGBP, Elav-like family member 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:94,385,581...94,405,822
Ensembl chr 3:94,385,602...94,399,505 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:11158314) MGI
GO_Central		 PMID:11158314 GO_REF:0000033 NCBI chr18:25,610,677...25,887,577
Ensembl chr18:25,610,689...25,887,214 		JBrowse link
G Celf5 CUGBP, Elav-like family member 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:81,295,061...81,318,564
Ensembl chr10:81,295,061...81,318,543 		JBrowse link
G Celf6 CUGBP, Elav-like family member 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:59,485,587...59,516,316
Ensembl chr 9:59,485,200...59,514,575 		JBrowse link
G Khdc4 KH domain containing 4, pre-mRNA splicing factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:88,593,087...88,620,240
Ensembl chr 3:88,593,110...88,620,231 		JBrowse link
G Luc7l Luc7-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:26,471,874...26,504,484
Ensembl chr17:26,471,870...26,504,478 		JBrowse link
G Luc7l2 LUC7-like 2 (S. cerevisiae) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:38,522,996...38,586,888
Ensembl chr 6:38,528,269...38,586,405 		JBrowse link
G Luc7l3 LUC7-like 3 (S. cerevisiae) involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:94,181,899...94,213,196
Ensembl chr11:94,178,716...94,212,814 		JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 acts_upstream_of_or_within IMP (PMID:14671308), (PMID:16717059) MGI PMID:14671308 PMID:16717059 NCBI chr 3:60,380,209...60,537,171
Ensembl chr 3:60,380,251...60,537,171 		JBrowse link
G Nol3 nucleolar protein 3 (apoptosis repressor with CARD domain) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:106,002,777...106,008,571
Ensembl chr 8:106,002,772...106,008,571 		JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 acts_upstream_of_or_within IMP
IDA		 (PMID:22802532)
(PMID:10829067)		 MGI PMID:10829067 PMID:22802532 NCBI chr 3:119,512,390...119,578,296
Ensembl chr 3:119,512,391...119,578,115 		JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:75,942,031...75,954,386
Ensembl chr15:75,942,031...75,952,773 		JBrowse link
G Rbmx RNA binding motif protein, X chromosome involved_in ISO RGD
MGI		 PMID:19282290 GO_REF:0000096 MGI:4417868 RGD:2316827 NCBI chr  X:56,428,708...56,438,405
Ensembl chr  X:56,428,890...56,438,396 		JBrowse link
G Rbmxl1 RNA binding motif protein, X-linked like-1 involved_in ISO PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr 8:79,231,898...79,235,557
Ensembl chr 8:79,231,898...79,235,527 		JBrowse link
G Setx senataxin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:29,013,600...29,072,483
Ensembl chr 2:29,014,193...29,072,483 		JBrowse link
G Srsf10 serine and arginine-rich splicing factor 10 involved_in IC
ISO		 (MGI:1315084|PMID:9774382) UniProt
MGI		 PMID:9774382 GO_REF:0000119 MGI:1315084 MGI:4834177 NCBI chr 4:135,582,454...135,597,219
Ensembl chr 4:135,583,058...135,597,219 		JBrowse link
G Srsf6 serine and arginine-rich splicing factor 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:162,773,428...162,779,041
Ensembl chr 2:162,773,448...162,779,041 		JBrowse link
G Ythdc1 YTH domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:86,951,349...86,984,518
Ensembl chr 5:86,952,080...86,984,518 		JBrowse link
negative regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acin1 apoptotic chromatin condensation inducer 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:54,879,618...54,924,422
Ensembl chr14:54,879,618...54,924,388 		JBrowse link
G Akr1c6 aldo-keto reductase family 1, member C6 acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr13:4,484,354...4,507,529
Ensembl chr13:4,484,305...4,507,876 		JBrowse link
G C1qbp complement component 1, q subcomponent binding protein involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:70,868,672...70,873,852
Ensembl chr11:70,868,662...70,873,852 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr18:25,610,677...25,887,577
Ensembl chr18:25,610,689...25,887,214 		JBrowse link
G Dyrk1a dual-specificity tyrosine phosphorylation regulated kinase 1a acts_upstream_of_or_within IMP (PMID:21470964) MGI PMID:21470964 NCBI chr16:94,370,770...94,496,378
Ensembl chr16:94,370,869...94,496,376 		JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 acts_upstream_of_or_within IMP
IDA		 (PMID:18480465) MGI PMID:18480465 NCBI chr 6:51,437,414...51,448,054
Ensembl chr 6:51,437,912...51,446,874 		JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr13:58,538,946...58,551,157
Ensembl chr13:58,538,956...58,551,157 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:22570490 RGD:9999428 NCBI chr 7:28,507,971...28,521,693
Ensembl chr 7:28,507,966...28,521,691 		JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within IDA (PMID:16376875) MGI PMID:16376875 NCBI chr11:33,102,498...33,114,143
Ensembl chr11:33,102,287...33,113,206 		JBrowse link
G Pcbp4 poly(rC) binding protein 4 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:23636947) MGI
GO_Central		 PMID:23636947 GO_REF:0000033 NCBI chr 9:106,330,181...106,341,211
Ensembl chr 9:106,330,490...106,341,211 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in
acts_upstream_of_or_within		 IDA
IMP
ISO		 (MGI:6271441|PMID:17679093)
(PMID:23636947)		 ARUK-UCL
MGI		 PMID:17679093 PMID:23636947 GO_REF:0000119 MGI:4834177 MGI:6271441 NCBI chr10:79,690,502...79,700,269
Ensembl chr10:79,690,261...79,700,605 		JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr 4:59,471,868...59,549,288
Ensembl chr 4:59,471,868...59,549,364 		JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr  X:20,483,596...20,517,128
Ensembl chr  X:20,483,742...20,517,140 		JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in IMP
ISO		 (MGI:5817050|PMID:27630136), (MGI:6162809|PMID:29895960), (MGI:6472247|PMID:33110103) UniProt
MGI		 PMID:27630136 PMID:29895960 PMID:33110103 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:5817050 MGI:6162809 MGI:6472247 NCBI chr19:53,649,422...53,855,514
Ensembl chr19:53,665,737...53,855,511 		JBrowse link
G Rbm42 RNA binding motif protein 42 acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr 7:30,340,420...30,349,653
Ensembl chr 7:30,340,424...30,349,742 		JBrowse link
G Rbmxl1 RNA binding motif protein, X-linked like-1 involved_in ISO PMID:15009664 UniProt PMID:15009664 RGD:8554197 NCBI chr 8:79,231,898...79,235,557
Ensembl chr 8:79,231,898...79,235,527 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:24,633,620...24,644,872
Ensembl chr17:24,633,539...24,644,875 		JBrowse link
G Sap18 Sin3-associated polypeptide 18 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:58,035,646...58,042,437
Ensembl chr14:58,035,637...58,044,095 		JBrowse link
G Sap18b Sin3-associated polypeptide 18B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:96,551,984...96,552,784
Ensembl chr 8:96,551,974...96,552,762 		JBrowse link
G Sfswap splicing factor SWAP involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 5:129,578,286...129,648,448
Ensembl chr 5:129,578,285...129,648,448 		JBrowse link
G Srsf10 serine and arginine-rich splicing factor 10 involved_in IDA
ISO		 (MGI:3688015|PMID:11684676) UniProt
MGI		 PMID:11684676 GO_REF:0000119 MGI:3688015 MGI:4834177 NCBI chr 4:135,582,454...135,597,219
Ensembl chr 4:135,583,058...135,597,219 		JBrowse link
G Srsf4 serine and arginine-rich splicing factor 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:131,600,841...131,629,036
Ensembl chr 4:131,600,928...131,629,017 		JBrowse link
G Srsf6 serine and arginine-rich splicing factor 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:162,773,428...162,779,041
Ensembl chr 2:162,773,448...162,779,041 		JBrowse link
G Srsf7 serine and arginine-rich splicing factor 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:80,507,509...80,514,734
Ensembl chr17:80,507,509...80,514,736 		JBrowse link
G Srsf9 serine and arginine-rich splicing factor 9 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:115,465,236...115,471,139
Ensembl chr 5:115,465,236...115,471,139 		JBrowse link
G U2af2 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:5,063,884...5,082,937
Ensembl chr 7:5,065,142...5,082,937 		JBrowse link
positive regulation of mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif1 eukaryotic translation initiation factor 1 acts_upstream_of_or_within IMP (PMID:16789828) MGI PMID:16789828 NCBI chr11:100,210,775...100,212,925
Ensembl chr11:100,210,711...100,212,922 		JBrowse link
G Exosc10 exosome component 10 acts_upstream_of_or_within IMP (PMID:16789828) MGI PMID:16789828 NCBI chr 4:148,642,870...148,666,854
Ensembl chr 4:148,642,886...148,666,858 		JBrowse link
G Upf1 UPF1 RNA helicase and ATPase acts_upstream_of_or_within IMP (PMID:16789828) MGI PMID:16789828 NCBI chr 8:70,784,143...70,806,418
Ensembl chr 8:70,784,175...70,805,928 		JBrowse link
G Upf3a UPF3 regulator of nonsense transcripts homolog A (yeast) acts_upstream_of_or_within IMP (PMID:16789828) MGI PMID:16789828 NCBI chr 8:13,834,636...13,848,723
Ensembl chr 8:13,835,615...13,849,193 		JBrowse link
G Upf3b UPF3 regulator of nonsense transcripts homolog B (yeast) acts_upstream_of_or_within IMP (PMID:16789828) MGI PMID:16789828 NCBI chr  X:36,355,331...36,374,124
Ensembl chr  X:36,355,331...36,373,975 		JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf3 CUGBP, Elav-like family member 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:94,385,581...94,405,822
Ensembl chr 3:94,385,602...94,399,505 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:25,610,677...25,887,577
Ensembl chr18:25,610,689...25,887,214 		JBrowse link
G Cirbp cold inducible RNA binding protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:80,001,824...80,008,620
Ensembl chr10:80,001,819...80,008,620 		JBrowse link
G Clns1a chloride channel, nucleotide-sensitive, 1A involved_in NAS (MGI:6870007|PMID:11756452) ComplexPortal PMID:11756452 MGI:6870007 NCBI chr 7:97,345,864...97,370,000
Ensembl chr 7:97,345,841...97,370,003 		JBrowse link
G Dazap1 DAZ associated protein 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:23636947) GO_Central
MGI		 PMID:23636947 GO_REF:0000033 NCBI chr10:80,097,168...80,124,242
Ensembl chr10:80,097,320...80,124,242 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 acts_upstream_of_or_within IMP (PMID:18480465) MGI PMID:18480465 NCBI chr11:119,179,189...119,190,869
Ensembl chr11:119,179,189...119,190,915 		JBrowse link
G Gm7324 predicted gene 7324 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:43,951,191...43,952,827
Ensembl chr14:43,935,285...43,952,835 		JBrowse link
G Hmx2 H6 homeobox 2 acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr 7:131,150,486...131,159,743
Ensembl chr 7:131,150,502...131,159,743 		JBrowse link
G Hspa8 heat shock protein 8 acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr 9:40,712,572...40,716,498
Ensembl chr 9:40,712,280...40,721,383 		JBrowse link
G Lmntd2 lamin tail domain containing 2 acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr 7:140,789,903...140,795,617
Ensembl chr 7:140,789,905...140,793,993 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:46,138,732...46,172,403
Ensembl chr 4:46,138,613...46,172,403 		JBrowse link
G Ncl nucleolin involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:86,272,441...86,287,177
Ensembl chr 1:86,272,441...86,287,122 		JBrowse link
G Nup98 nucleoporin 98 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:101,768,607...101,859,359
Ensembl chr 7:101,768,605...101,859,383 		JBrowse link
G Obi1 ORC ubiquitin ligase 1 acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr14:104,714,970...104,760,148
Ensembl chr14:104,714,972...104,760,081 		JBrowse link
G Prdx6 peroxiredoxin 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:161,067,682...161,078,780
Ensembl chr 1:161,067,682...161,078,789 		JBrowse link
G Prdx6b peroxiredoxin 6B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:80,122,814...80,125,702
Ensembl chr 2:80,122,816...80,125,700 		JBrowse link
G Prmt5 protein arginine N-methyltransferase 5 involved_in NAS (MGI:6870007|PMID:11756452) ComplexPortal PMID:11756452 MGI:6870007 NCBI chr14:54,744,639...54,754,927
Ensembl chr14:54,744,644...54,754,982 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 acts_upstream_of_or_within IMP (PMID:18480465) MGI PMID:18480465 NCBI chr19:10,872,595...10,886,923
Ensembl chr19:10,872,595...10,886,923 		JBrowse link
G Rbm3 RNA binding motif (RNP1, RRM) protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:8,005,214...8,012,119
Ensembl chr  X:8,005,214...8,012,119 		JBrowse link
G Rbmx RNA binding motif protein, X chromosome involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:56,428,708...56,438,405
Ensembl chr  X:56,428,890...56,438,396 		JBrowse link
G Rbmxl1 RNA binding motif protein, X-linked like-1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:79,231,898...79,235,557
Ensembl chr 8:79,231,898...79,235,527 		JBrowse link
G Rbmxl2 RNA binding motif protein, X-linked-like 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:106,808,652...106,810,123
Ensembl chr 7:106,808,652...106,810,123 		JBrowse link
G Rbmy RNA binding motif protein, Y chromosome involved_in IBA GO_Central GO_REF:0000033 NCBI chr  Y:2,830,680...2,841,858
Ensembl chr  Y:2,830,680...2,841,854 		JBrowse link
G Rbmyf1 RNA binding motif protein Y-linked family member 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  Y:2,785,165...2,796,224
Ensembl chr  Y:2,785,165...2,796,205 		JBrowse link
G Rbmyf3 RNA binding motif protein Y-linked family member 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  Y:2,900,989...2,912,210
Ensembl chr  Y:2,900,989...2,912,206 		JBrowse link
G Rbmyf6 RNA binding motif protein Y-linked family member 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  Y:3,326,746...3,345,329
Ensembl chr  Y:3,326,750...3,345,329 		JBrowse link
G Rbmyf9 RNA binding motif protein Y-linked family member 9 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  Y:3,771,673...3,783,271
Ensembl chr  Y:3,771,673...3,783,267 		JBrowse link
G Sf3b4 splicing factor 3b, subunit 4 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:23636947) MGI
GO_Central		 PMID:23636947 GO_REF:0000033 NCBI chr 3:96,079,822...96,084,880
Ensembl chr 3:96,079,648...96,084,880 		JBrowse link
G Slc39a5 solute carrier family 39 (metal ion transporter), member 5 acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr10:128,231,796...128,237,145
Ensembl chr10:128,231,800...128,237,098 		JBrowse link
G Slirp SRA stem-loop interacting RNA binding protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:87,490,666...87,496,694
Ensembl chr12:87,490,666...87,498,976 		JBrowse link
G Snrnp70 small nuclear ribonucleoprotein 70 (U1) acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr 7:45,025,878...45,045,177
Ensembl chr 7:45,025,877...45,045,166 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:87,496,680...87,519,069
Ensembl chr12:87,495,845...87,519,044 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:126,057,875...126,096,548
Ensembl chr 4:126,057,875...126,096,553 		JBrowse link
G Tra2a transformer 2 alpha acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:22194695) MGI
GO_Central		 PMID:22194695 GO_REF:0000033 NCBI chr 6:49,220,855...49,241,182
Ensembl chr 6:49,220,858...49,240,967 		JBrowse link
G Tra2b transformer 2 beta involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:22194695) MGI
GO_Central		 PMID:22194695 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr16:22,063,302...22,084,755
Ensembl chr16:22,063,299...22,084,755 		JBrowse link
G Wdr77 WD repeat domain 77 involved_in NAS (MGI:6870007|PMID:11756452) ComplexPortal PMID:11756452 MGI:6870007 NCBI chr 3:105,866,814...105,877,076
Ensembl chr 3:105,866,685...105,877,353 		JBrowse link
G Zfp64 zinc finger protein 64 acts_upstream_of_or_within IMP (PMID:23636947) MGI PMID:23636947 NCBI chr 2:168,735,251...168,797,507
Ensembl chr 2:168,735,251...168,797,507 		JBrowse link
regulation of alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arb2a ARB2 cotranscriptional regulator A involved_in IDA (MGI:6113784|PMID:29311329) UniProt PMID:29311329 MGI:6113784 NCBI chr13:77,856,799...78,314,359
Ensembl chr13:77,850,152...78,314,354 		JBrowse link
G Celf1 CUGBP, Elav-like family member 1 involved_in
acts_upstream_of_or_within		 IBA
IDA
IMP		 (PMID:32109384) GO_Central
MGI		 PMID:32109384 GO_REF:0000033 NCBI chr 2:90,770,604...90,849,842
Ensembl chr 2:90,770,727...90,849,842 		JBrowse link
G Celf2 CUGBP, Elav-like family member 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:6,544,505...7,401,345
Ensembl chr 2:6,544,505...7,514,374 		JBrowse link
G Celf3 CUGBP, Elav-like family member 3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 3:94,385,581...94,405,822
Ensembl chr 3:94,385,602...94,399,505 		JBrowse link
G Celf4 CUGBP, Elav-like family member 4 acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI
GO_Central		 GO_REF:0000008 GO_REF:0000033 NCBI chr18:25,610,677...25,887,577
Ensembl chr18:25,610,689...25,887,214 		JBrowse link
G Celf5 CUGBP, Elav-like family member 5 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:81,295,061...81,318,564
Ensembl chr10:81,295,061...81,318,543 		JBrowse link
G Celf6 CUGBP, Elav-like family member 6 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:59,485,587...59,516,316
Ensembl chr 9:59,485,200...59,514,575 		JBrowse link
G Ddx17 DEAD box helicase 17 involved_in IDA
ISO		 (MGI:5819339|PMID:23022728) UniProt
MGI		 PMID:23022728 GO_REF:0000119 MGI:4834177 MGI:5819339 NCBI chr15:79,411,897...79,430,976
Ensembl chr15:79,411,937...79,430,942 		JBrowse link
G Ddx5 DEAD box helicase 5 involved_in IDA
ISO		 (MGI:5819339|PMID:23022728) UniProt
MGI		 PMID:23022728 GO_REF:0000119 MGI:4834177 MGI:5819339 NCBI chr11:106,671,181...106,680,011
Ensembl chr11:106,671,181...106,680,011 		JBrowse link
G Dyrk1a dual-specificity tyrosine phosphorylation regulated kinase 1a involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr16:94,370,770...94,496,378
Ensembl chr16:94,370,869...94,496,376 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 involved_in IDA
ISO		 (MGI:5009520|PMID:18653529) UniProt
MGI		 PMID:18653529 GO_REF:0000119 MGI:4834177 MGI:5009520 NCBI chr  X:67,722,144...67,761,569
Ensembl chr  X:67,722,147...67,761,569 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:25689357) CAFA PMID:25689357 NCBI chr15:103,148,840...103,155,119
Ensembl chr15:103,148,859...103,155,119 		JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L involved_in IMP
ISO		 (MGI:5441689|PMID:22523384) UniProt
MGI		 PMID:22523384 GO_REF:0000119 MGI:4834177 MGI:5441689 NCBI chr 7:28,507,971...28,521,693
Ensembl chr 7:28,507,966...28,521,691 		JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:178,148,673...178,170,063
Ensembl chr 1:178,148,673...178,165,362 		JBrowse link
G Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 NCBI chr 4:129,596,143...129,637,402
Ensembl chr 4:129,596,957...129,636,096 		JBrowse link
G Khdrbs2 KH domain containing, RNA binding, signal transduction associated 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:32,211,683...32,744,305
Ensembl chr 1:32,211,795...32,697,649 		JBrowse link
G Khdrbs3 KH domain containing, RNA binding, signal transduction associated 3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000096 MGI:4417868 NCBI chr15:68,800,155...68,973,064
Ensembl chr15:68,800,269...68,973,060 		JBrowse link
G Magoh mago homolog, exon junction complex core component involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:107,736,952...107,744,621
Ensembl chr 4:107,736,952...107,744,621 		JBrowse link
G Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) acts_upstream_of_or_within IMP (PMID:20797886) MGI PMID:20797886 NCBI chr19:5,845,718...5,852,700
Ensembl chr19:5,845,717...5,852,706 		JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:60,380,209...60,537,171
Ensembl chr 3:60,380,251...60,537,171 		JBrowse link
G Mbnl2 muscleblind like splicing factor 2 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:19720736) MGI PMID:19720736 GO_REF:0000008 GO_REF:0000096 MGI:4417868 NCBI chr14:120,513,077...120,669,110
Ensembl chr14:120,513,081...120,669,109 		JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within IMP
IDA		 (PMID:9525963) MGI PMID:9525963 NCBI chr 7:46,025,898...46,028,516
Ensembl chr 7:46,025,898...46,028,523 		JBrowse link
G Nova1 NOVA alternative splicing regulator 1 involved_in IDA
IBA
IMP		 (MGI:6716952|PMID:17065982)
(MGI:5789071|PMID:27223325), (MGI:6718240|PMID:14615540)		 UniProt
GO_Central		 PMID:14615540 PMID:17065982 PMID:27223325 GO_REF:0000033 MGI:5789071 MGI:6716952 MGI:6718240 NCBI chr12:46,744,678...46,866,143
Ensembl chr12:46,741,300...46,865,712 		JBrowse link
G Nova2 NOVA alternative splicing regulator 2 involved_in IMP
ISO		 (MGI:3587155|PMID:16041372), (MGI:5789071|PMID:27223325), (MGI:6716952|PMID:17065982), (MGI:6718240|PMID:14615540) UniProt
MGI		 PMID:14615540 PMID:16041372 PMID:17065982 PMID:27223325 GO_REF:0000119 MGI:3587155 MGI:4834177 MGI:5789071 MGI:6716952 MGI:6718240 NCBI chr 7:18,659,319...18,699,244
Ensembl chr 7:18,659,813...18,699,244 		JBrowse link
G Nsrp1 nuclear speckle regulatory protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:76,935,118...76,969,263
Ensembl chr11:76,935,118...76,969,261 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:79,690,502...79,700,269
Ensembl chr10:79,690,261...79,700,605 		JBrowse link
G Puf60 poly-U binding splicing factor 60 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:75,942,031...75,954,386
Ensembl chr15:75,942,031...75,952,773 		JBrowse link
G Rbfox1 RNA binding protein, fox-1 homolog (C. elegans) 1 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:23300487) MGI
GO_Central		 PMID:23300487 GO_REF:0000033 NCBI chr16:5,702,566...7,230,344
Ensembl chr16:5,703,219...7,229,390 		JBrowse link
G Rbfox2 RNA binding protein, fox-1 homolog (C. elegans) 2 involved_in
acts_upstream_of_or_within		 IMP
IBA
IGI
ISO		 (MGI:3770484|PMID:17715393), (MGI:5284784|PMID:17101796)
(PMID:22357600)
Cacna1c
Atp2b1, Mef2a
Fxr1, Mef2a, Mtmr3
Mcl1		 BHF-UCL
GO_Central
MGI
RGD		 PMID:17101796 PMID:17715393 PMID:22357600 PMID:27239029 PMID:28993448 More... GO_REF:0000033 GO_REF:0000096 MGI:3770484 MGI:4417868 MGI:5284784 RGD:329845872 RGD:329845873 RGD:329845874 RGD:329848961 NCBI chr15:76,963,190...77,193,058
Ensembl chr15:76,963,190...77,191,204 		JBrowse link
G Rbfox3 RNA binding protein, fox-1 homolog (C. elegans) 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:118,380,586...118,802,423
Ensembl chr11:118,380,588...118,802,423 		JBrowse link
G Rbm11 RNA binding motif protein 11 involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:21984414) GO_Central
MGI		 PMID:21984414 GO_REF:0000033 NCBI chr16:75,389,796...75,399,706
Ensembl chr16:75,389,732...75,399,717 		JBrowse link
G Rbm15 RNA binding motif protein 15 involved_in IDA
IBA
ISO		 (MGI:6158801|PMID:25468569) UniProt
GO_Central
MGI		 PMID:25468569 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6158801 NCBI chr 3:107,212,827...107,244,102
Ensembl chr 3:107,232,737...107,240,989 		JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:106,758,127...106,764,274
Ensembl chr 9:106,758,117...106,764,627 		JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr19:53,649,422...53,855,514
Ensembl chr19:53,665,737...53,855,511 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in IMP
IBA
ISO		 (MGI:6148527|PMID:25313962) UniProt
GO_Central
MGI		 PMID:25313962 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 MGI:4417868 MGI:4834177 MGI:6148527 NCBI chr13:46,571,664...46,584,575
Ensembl chr13:46,571,910...46,584,571 		JBrowse link
G Rbm25 RNA binding motif protein 25 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr12:83,678,990...83,729,901
Ensembl chr12:83,678,010...83,729,897 		JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:23129807) MGI PMID:23129807 GO_REF:0000119 MGI:4834177 NCBI chr19:4,834,321...4,844,037
Ensembl chr19:4,834,321...4,843,929 		JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:66,173,892...66,309,297
Ensembl chr 5:66,173,892...66,330,461 		JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:107,617,694...107,648,228
Ensembl chr 9:107,617,570...107,648,195 		JBrowse link
G Rbm7 RNA binding motif protein 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:48,399,997...48,406,630
Ensembl chr 9:48,400,001...48,406,599 		JBrowse link
G Rbm8a RNA binding motif protein 8a involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:96,537,244...96,541,107
Ensembl chr 3:96,537,249...96,541,107 		JBrowse link
G Rbm8a2 RNA binding motif protein 8A2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:175,805,784...175,806,509
Ensembl chr 1:175,805,343...175,806,680 		JBrowse link
G Rbmx RNA binding motif protein, X chromosome involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:56,428,708...56,438,405
Ensembl chr  X:56,428,890...56,438,396 		JBrowse link
G Rbmxl1 RNA binding motif protein, X-linked like-1 involved_in ISO PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr 8:79,231,898...79,235,557
Ensembl chr 8:79,231,898...79,235,527 		JBrowse link
G Rbpms RNA binding protein gene with multiple splicing involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 8:34,272,671...34,419,925
Ensembl chr 8:34,272,671...34,419,891 		JBrowse link
G Rbpms2 RNA binding protein with multiple splicing 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:65,536,638...65,567,818
Ensembl chr 9:65,536,930...65,567,810 		JBrowse link
G Rest RE1-silencing transcription factor involved_in IMP (MGI:6201823|PMID:21884984) UniProt PMID:21884984 MGI:6201823 NCBI chr 5:77,413,273...77,434,279
Ensembl chr 5:77,413,338...77,434,279 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:24,633,620...24,644,872
Ensembl chr17:24,633,539...24,644,875 		JBrowse link
G Sap18 Sin3-associated polypeptide 18 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:58,035,646...58,042,437
Ensembl chr14:58,035,637...58,044,095 		JBrowse link
G Sap18b Sin3-associated polypeptide 18B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:96,551,984...96,552,784
Ensembl chr 8:96,551,974...96,552,762 		JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 involved_in
acts_upstream_of_or_within		 IMP
ISO		 (MGI:6201863|PMID:25727884)
(PMID:23055939)		 UniProt
MGI		 PMID:23055939 PMID:25727884 GO_REF:0000119 MGI:4834177 MGI:6201863 NCBI chr 5:116,577,331...116,729,882
Ensembl chr 5:116,577,334...116,729,876 		JBrowse link
G Srsf12 serine and arginine-rich splicing factor 12 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:33,208,991...33,233,344
Ensembl chr 4:33,208,991...33,233,340 		JBrowse link
G Srsf2 serine and arginine-rich splicing factor 2 acts_upstream_of_or_within IDA (PMID:21470964) MGI PMID:21470964 NCBI chr11:116,740,723...116,744,511
Ensembl chr11:116,740,727...116,743,920 		JBrowse link
G Srsf6 serine and arginine-rich splicing factor 6 involved_in
acts_upstream_of_or_within		 ISO (PMID:23132731) MGI PMID:23132731 GO_REF:0000119 MGI:4834177 NCBI chr 2:162,773,428...162,779,041
Ensembl chr 2:162,773,448...162,779,041 		JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:126,057,875...126,096,548
Ensembl chr 4:126,057,875...126,096,553 		JBrowse link
G Tia1 cytotoxic granule-associated RNA binding protein 1 involved_in IDA
ISO		 (MGI:6827199|PMID:11514562), (MGI:6827311|PMID:10938105) UniProt
MGI		 PMID:10938105 PMID:11514562 GO_REF:0000119 MGI:4834177 MGI:6827199 MGI:6827311 NCBI chr 6:86,381,001...86,410,387
Ensembl chr 6:86,381,201...86,410,387 		JBrowse link
G Tra2b transformer 2 beta involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:22,063,302...22,084,755
Ensembl chr16:22,063,299...22,084,755 		JBrowse link
G Wtap WT1 associating protein involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:13,185,686...13,211,430
Ensembl chr17:13,185,683...13,213,056 		JBrowse link
G Ythdc1 YTH domain containing 1 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:29799838) MGI
GO_Central		 PMID:29799838 GO_REF:0000033 NCBI chr 5:86,951,349...86,984,518
Ensembl chr 5:86,952,080...86,984,518 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:80,971,113...80,988,056
Ensembl chr10:80,971,054...80,988,829 		JBrowse link
regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:58,538,946...58,551,157
Ensembl chr13:58,538,956...58,551,157 		JBrowse link
G Jmjd6 jumonji domain containing 6 involved_in IMP
ISO		 (MGI:4940413|PMID:21300889) UniProt
MGI		 PMID:21300889 GO_REF:0000119 MGI:4834177 MGI:4940413 NCBI chr11:116,728,258...116,734,593
Ensembl chr11:116,728,258...116,734,275 		JBrowse link
G Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1 involved_in IDA (MGI:5302133|PMID:22196734) UniProt PMID:22196734 MGI:5302133 NCBI chr 4:129,596,143...129,637,402
Ensembl chr 4:129,596,957...129,636,096 		JBrowse link
G Khdrbs2 KH domain containing, RNA binding, signal transduction associated 2 involved_in IDA (MGI:5302133|PMID:22196734) UniProt PMID:22196734 MGI:5302133 NCBI chr 1:32,211,683...32,744,305
Ensembl chr 1:32,211,795...32,697,649 		JBrowse link
G Khdrbs3 KH domain containing, RNA binding, signal transduction associated 3 involved_in IDA (MGI:5302133|PMID:22196734) UniProt PMID:22196734 MGI:5302133 NCBI chr15:68,800,155...68,973,064
Ensembl chr15:68,800,269...68,973,060 		JBrowse link
G Larp7 La ribonucleoprotein 7, transcriptional regulator involved_in IMP
ISO		 (MGI:6400674|PMID:32017896) UniProt
MGI		 PMID:32017896 GO_REF:0000119 MGI:4834177 MGI:6400674 NCBI chr 3:127,330,363...127,346,998
Ensembl chr 3:127,330,363...127,346,998 		JBrowse link
G Larp7-ps La ribonucleoprotein 7, transcriptional regulator, pseudogene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:92,078,980...92,079,987
Ensembl chr 4:92,078,981...92,079,986 		JBrowse link
G Mettl16 methyltransferase 16, N6-methyladenosine involved_in
NOT|involved_in		 ISO
IDA		 (PMID:28525753)
(MGI:6114846|PMID:29262316)		 UniProt
UniProt		 PMID:28525753 PMID:29262316 MGI:6114846 NCBI chr11:74,661,658...74,716,649
Ensembl chr11:74,661,656...74,719,351 		JBrowse link
G Qki quaking, KH domain containing RNA binding involved_in IDA
IBA
ISO
IMP		 (MGI:6108922|PMID:29021242)
(MGI:6504661|PMID:33397958), (MGI:6514532|PMID:33378678), (MGI:7485690|PMID:36627242)		 UniProt
GO_Central
MGI		 PMID:29021242 PMID:33378678 PMID:33397958 PMID:36627242 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6108922 MGI:6504661 MGI:6514532 MGI:7485690 NCBI chr17:10,425,480...10,538,706
Ensembl chr17:10,421,530...10,538,783 		JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:53,649,422...53,855,514
Ensembl chr19:53,665,737...53,855,511 		JBrowse link
G Rbm39 RNA binding motif protein 39 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:155,989,159...156,022,649
Ensembl chr 2:155,989,159...156,022,158 		JBrowse link
G Sf1 splicing factor 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:6,413,952...6,428,060
Ensembl chr19:6,413,720...6,428,060 		JBrowse link
G Son Son DNA binding protein involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr16:91,444,712...91,476,080
Ensembl chr16:91,444,394...91,476,109 		JBrowse link
G Srrm1 serine/arginine repetitive matrix 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:135,047,795...135,080,787
Ensembl chr 4:135,047,795...135,080,632 		JBrowse link
G Srsf10 serine and arginine-rich splicing factor 10 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:135,582,454...135,597,219
Ensembl chr 4:135,583,058...135,597,219 		JBrowse link
G Srsf3 serine and arginine-rich splicing factor 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:29,251,634...29,262,346
Ensembl chr17:29,251,602...29,262,347 		JBrowse link
G Tia1 cytotoxic granule-associated RNA binding protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:86,381,001...86,410,387
Ensembl chr 6:86,381,201...86,410,387 		JBrowse link
G Ythdc1 YTH domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:86,951,349...86,984,518
Ensembl chr 5:86,952,080...86,984,518 		JBrowse link
spliceosomal complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crnkl1 crooked neck pre-mRNA splicing factor 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:145,759,402...145,776,620
Ensembl chr 2:145,759,399...145,776,934 		JBrowse link
G Ddx39b DEAD box helicase 39b involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:35,460,722...35,472,683
Ensembl chr17:35,460,722...35,472,683 		JBrowse link
G Gcfc2 GC-rich sequence DNA binding factor 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:81,887,543...81,936,079
Ensembl chr 6:81,900,650...81,936,896 		JBrowse link
G Gemin2 gem nuclear organelle associated protein 2 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr12:59,060,177...59,075,256
Ensembl chr12:59,060,179...59,075,256 		JBrowse link
G Gemin6 gem nuclear organelle associated protein 6 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr17:80,514,933...80,535,926
Ensembl chr17:80,531,870...80,535,926 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:46,138,732...46,172,403
Ensembl chr 4:46,138,613...46,172,403 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:10,872,595...10,886,923
Ensembl chr19:10,872,595...10,886,923 		JBrowse link
G Rbm5 RNA binding motif protein 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:107,617,694...107,648,228
Ensembl chr 9:107,617,570...107,648,195 		JBrowse link
G Rsrp1 arginine/serine rich protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:134,650,936...134,654,681
Ensembl chr 4:134,650,903...134,654,982 		JBrowse link
G Scaf11 SR-related CTD-associated factor 11 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:96,309,580...96,358,695
Ensembl chr15:96,309,580...96,358,724 		JBrowse link
G Sf3a2 splicing factor 3a, subunit 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:80,634,569...80,640,756
Ensembl chr10:80,634,032...80,640,758 		JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:55,024,328...55,066,660
Ensembl chr 1:55,024,328...55,066,640 		JBrowse link
G Smn1 survival motor neuron 1 involved_in ISO (PMID:9845364) UniProt PMID:9845364 NCBI chr13:100,259,713...100,274,206
Ensembl chr13:100,261,360...100,274,198 		JBrowse link
G Srpk1 serine/arginine-rich protein specific kinase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:28,806,622...28,841,795
Ensembl chr17:28,806,622...28,841,683 		JBrowse link
G Srpk2 serine/arginine-rich protein specific kinase 2 involved_in IDA
IBA
ISO		 (MGI:1195449|PMID:9446799) UniProt
GO_Central
MGI		 PMID:9446799 GO_REF:0000033 GO_REF:0000119 MGI:1195449 MGI:4834177 NCBI chr 5:23,708,262...23,889,639
Ensembl chr 5:23,708,262...23,889,615 		JBrowse link
G Srpk3 serine/arginine-rich protein specific kinase 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:72,818,011...72,822,531
Ensembl chr  X:72,818,011...72,822,531 		JBrowse link
G U2af2 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:5,063,884...5,082,937
Ensembl chr 7:5,065,142...5,082,937 		JBrowse link
G Usp39 ubiquitin specific peptidase 39 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:72,295,749...72,322,190
Ensembl chr 6:72,295,661...72,322,167 		JBrowse link
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 involved_in ISO (PMID:21041408) UniProt PMID:21041408 NCBI chr  X:162,719,268...162,741,662
Ensembl chr  X:162,718,439...162,741,657 		JBrowse link
spliceosomal complex disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx8 DEAH-box helicase 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:101,623,782...101,658,184
Ensembl chr11:101,623,745...101,658,184 		JBrowse link
G Dnajc17 DnaJ heat shock protein family (Hsp40) member C17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:119,002,981...119,039,342
Ensembl chr 2:119,002,981...119,039,276 		JBrowse link
G Tfip11 tuftelin interacting protein 11 involved_in IMP
IBA
ISO		 (MGI:5545993|PMID:19857462) UniProt
GO_Central
MGI		 PMID:19857462 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5545993 NCBI chr 5:112,474,235...112,485,939
Ensembl chr 5:112,474,224...112,485,939 		JBrowse link
spliceosomal snRNP assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clns1a chloride channel, nucleotide-sensitive, 1A involved_in NAS
IBA
ISO		 (MGI:6870007|PMID:11756452) ComplexPortal
GO_Central
MGI		 PMID:11756452 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:6870007 NCBI chr 7:97,345,864...97,370,000
Ensembl chr 7:97,345,841...97,370,003 		JBrowse link
G Coil coilin involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:88,864,761...88,882,439
Ensembl chr11:88,861,078...88,882,439 		JBrowse link
G Ddx20 DEAD box helicase 20 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 3:105,585,586...105,595,104
Ensembl chr 3:105,585,586...105,594,890 		JBrowse link
G Gemin2 gem nuclear organelle associated protein 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr12:59,060,177...59,075,256
Ensembl chr12:59,060,179...59,075,256 		JBrowse link
G Gemin4 gem nuclear organelle associated protein 4 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:76,101,397...76,108,398
Ensembl chr11:76,101,397...76,108,490 		JBrowse link
G Gemin5 gem nuclear organelle associated protein 5 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:58,010,827...58,059,378
Ensembl chr11:58,010,828...58,059,365 		JBrowse link
G Gemin6 gem nuclear organelle associated protein 6 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:80,514,933...80,535,926
Ensembl chr17:80,531,870...80,535,926 		JBrowse link
G Gemin6-ps gem nuclear organelle associated protein 6, pseudogene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:117,785,610...117,786,522
Ensembl chr 6:117,785,681...117,786,181 		JBrowse link
G Gemin7 gem nuclear organelle associated protein 7 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:19,298,874...19,307,268
Ensembl chr 7:19,298,871...19,311,520 		JBrowse link
G Gemin8 gem nuclear organelle associated protein 8 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr  X:164,953,412...164,973,508
Ensembl chr  X:164,953,450...164,973,508 		JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:71,124,663...71,131,402
Ensembl chr 8:71,125,898...71,131,402 		JBrowse link
G Prmt5 protein arginine N-methyltransferase 5 involved_in NAS
ISO		 (MGI:6870007|PMID:11756452) ComplexPortal
MGI		 PMID:11756452 GO_REF:0000119 MGI:4834177 MGI:6870007 NCBI chr14:54,744,639...54,754,927
Ensembl chr14:54,744,644...54,754,982 		JBrowse link
G Prmt7 protein arginine N-methyltransferase 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:106,937,686...106,978,326
Ensembl chr 8:106,937,568...106,979,426 		JBrowse link
G Prpf4b pre-mRNA processing factor 4B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:35,058,803...35,090,047
Ensembl chr13:35,059,285...35,090,047 		JBrowse link
G Sart3 squamous cell carcinoma antigen recognized by T cells 3 NOT|involved_in ISO (PMID:15314151) UniProt
MGI		 PMID:15314151 GO_REF:0000119 MGI:4834177 NCBI chr 5:113,880,505...113,910,461
Ensembl chr 5:113,880,507...113,910,571 		JBrowse link
G Smn1 survival motor neuron 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:100,259,713...100,274,206
Ensembl chr13:100,261,360...100,274,198 		JBrowse link
G Snrpb small nuclear ribonucleoprotein B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:130,013,560...130,031,184
Ensembl chr 2:130,013,555...130,021,323 		JBrowse link
G Snrpc U1 small nuclear ribonucleoprotein C involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:28,059,002...28,070,942
Ensembl chr17:28,057,124...28,070,942 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr18:10,617,796...10,628,230
Ensembl chr18:10,617,775...10,642,079 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 7:18,883,370...18,886,659
Ensembl chr 7:18,883,647...18,887,467 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr10:75,353,852...75,371,300
Ensembl chr10:75,353,385...75,373,215 		JBrowse link
G Snrpe small nuclear ribonucleoprotein E involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:133,531,609...133,538,018
Ensembl chr 1:133,531,609...133,538,029 		JBrowse link
G Snrpert small nuclear ribonucleoprotein E, pseudogene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:131,163,860...131,164,290
Ensembl chr 2:131,164,008...131,164,286 		JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:93,418,891...93,425,520
Ensembl chr10:93,418,891...93,425,568 		JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:86,348,522...86,355,884
Ensembl chr 6:86,348,286...86,356,310 		JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:137,712,080...137,728,928
Ensembl chr 6:137,712,076...137,728,930 		JBrowse link
G Tdrd6 tudor domain containing 6 involved_in IMP (MGI:5904379|PMID:28263986) CACAO PMID:28263986 MGI:5904379 NCBI chr17:43,926,225...43,942,737
Ensembl chr17:43,926,226...43,941,190 		JBrowse link
G Tssc4 tumor-suppressing subchromosomal transferable fragment 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:142,621,049...142,624,830
Ensembl chr 7:142,622,986...142,624,830 		JBrowse link
G Wdr77 WD repeat domain 77 involved_in NAS (MGI:6870007|PMID:11756452) ComplexPortal PMID:11756452 MGI:6870007 NCBI chr 3:105,866,814...105,877,076
Ensembl chr 3:105,866,685...105,877,353 		JBrowse link
spliceosomal tri-snRNP complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aar2 AAR2 splicing factor homolog involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:156,389,496...156,410,892
Ensembl chr 2:156,389,504...156,410,892 		JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO MGI GO_REF:0000008 NCBI chr17:35,200,830...35,204,867
Ensembl chr17:35,200,838...35,204,867 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:10,872,595...10,886,923
Ensembl chr19:10,872,595...10,886,923 		JBrowse link
G Prpf3 pre-mRNA processing factor 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:95,737,436...95,763,197
Ensembl chr 3:95,737,436...95,763,197 		JBrowse link
G Prpf31 pre-mRNA processing factor 31 involved_in
acts_upstream_of_or_within		 ISO (PMID:11867543) MGI PMID:11867543 GO_REF:0000119 MGI:4834177 NCBI chr 7:3,632,984...3,645,484
Ensembl chr 7:3,632,984...3,645,485 		JBrowse link
G Prpf4b pre-mRNA processing factor 4B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:35,058,803...35,090,047
Ensembl chr13:35,059,285...35,090,047 		JBrowse link
G Prpf6 pre-mRNA splicing factor 6 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:181,243,112...181,297,454
Ensembl chr 2:181,233,661...181,297,453 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:75,377,603...75,400,273
Ensembl chr11:75,377,642...75,400,275 		JBrowse link
G Sart3 squamous cell carcinoma antigen recognized by T cells 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:113,880,505...113,910,461
Ensembl chr 5:113,880,507...113,910,571 		JBrowse link
G Tssc4 tumor-suppressing subchromosomal transferable fragment 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:142,621,049...142,624,830
Ensembl chr 7:142,622,986...142,624,830 		JBrowse link
G Usp4 ubiquitin specific peptidase 4 (proto-oncogene) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:108,223,763...108,269,744
Ensembl chr 9:108,225,052...108,269,744 		JBrowse link
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snrnp200 small nuclear ribonucleoprotein 200 (U5) involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:127,050,306...127,082,373
Ensembl chr 2:127,050,306...127,082,371 		JBrowse link
U2-type prespliceosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx42 DEAD box helicase 42 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:106,107,715...106,139,966
Ensembl chr11:106,107,752...106,139,965 		JBrowse link
G Ddx46 DEAD box helicase 46 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:55,782,790...55,829,080
Ensembl chr13:55,782,841...55,829,069 		JBrowse link
G Htatsf1 HIV TAT specific factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:56,098,930...56,112,543
Ensembl chr  X:56,098,943...56,112,543 		JBrowse link
G Sf3a1 splicing factor 3a, subunit 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:4,110,354...4,132,541
Ensembl chr11:4,110,350...4,132,541 		JBrowse link
G Sf3a2 splicing factor 3a, subunit 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:80,634,569...80,640,756
Ensembl chr10:80,634,032...80,640,758 		JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:124,602,966...124,626,234
Ensembl chr 4:124,608,569...124,626,253 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    metabolic process 10995
      organic substance metabolic process 10563
        macromolecule metabolic process 8847
          nucleic acid metabolic process 4820
            RNA metabolic process 4260
              mRNA metabolic process 849
                mRNA processing 502
                  mRNA splicing, via spliceosome 313
                    alternative mRNA splicing, via spliceosome + 79
                    mRNA cis splicing, via spliceosome + 26
                    mRNA trans splicing, via spliceosome + 0
                    negative regulation of mRNA splicing, via spliceosome + 26
                    positive regulation of mRNA splicing, via spliceosome + 42
                    regulation of mRNA splicing, via spliceosome + 122
                    spliceosomal complex assembly + 52
                    spliceosomal complex disassembly 3
                    spliceosomal conformational changes to generate catalytic conformation + 4
                    spliceosomal snRNP assembly + 37
                    spliceosome-depend formation of circular RNA 0
Path 2
Term Annotations click to browse term
  biological_process 28573
    cellular process 17593
      cellular metabolic process 9652
        cellular aromatic compound metabolic process 5629
          nucleobase-containing compound metabolic process 5383
            nucleic acid metabolic process 4820
              RNA metabolic process 4260
                RNA processing 937
                  RNA splicing 461
                    RNA splicing, via transesterification reactions 313
                      RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 313
                        mRNA splicing, via spliceosome 313
                          alternative mRNA splicing, via spliceosome + 79
                          mRNA cis splicing, via spliceosome + 26
                          mRNA trans splicing, via spliceosome + 0
                          negative regulation of mRNA splicing, via spliceosome + 26
                          positive regulation of mRNA splicing, via spliceosome + 42
                          regulation of mRNA splicing, via spliceosome + 122
                          spliceosomal complex assembly + 52
                          spliceosomal complex disassembly 3
                          spliceosomal conformational changes to generate catalytic conformation + 4
                          spliceosomal snRNP assembly + 37
                          spliceosome-depend formation of circular RNA 0
paths to the root