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ONTOLOGY REPORT - ANNOTATIONS


Term:response to oxygen radical
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Accession:GO:0000305 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen radical stimulus. An oxygen radical is any oxygen species that carries a free electron; examples include hydroxyl radicals and the superoxide anion.


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cellular response to superoxide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adprs ADP-ribosylserine hydrolase ISO (PMID:30401461)
(MGI:MGI:5523722|PMID:24191052)
UniProt
MGI
PMID:24191052, PMID:30401461 MGI:MGI:5523722 NCBI chrNW_004955452:14,123,590...14,126,522
Ensembl chrNW_004955452:14,121,837...14,126,664
JBrowse link
G Glrx2 glutaredoxin 2 ISO RGD PMID:25126518 RGD:9686060 NCBI chrNW_004955406:30,497,562...30,506,463
Ensembl chrNW_004955406:30,497,562...30,509,340
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO (MGI:MGI:5523722|PMID:24191052) MGI PMID:24191052 MGI:MGI:5523722 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
regulation of removal of superoxide radicals term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule ISO (MGI:MGI:4850200|PMID:20978343) BHF-UCL PMID:20978343 MGI:MGI:4850200 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313
JBrowse link
G Dhfr dihydrofolate reductase ISO (MGI:MGI:5645206|PMID:19666465) BHF-UCL PMID:19666465 MGI:MGI:5645206 NCBI chrNW_004955418:29,274,170...29,283,028 JBrowse link
G Fbln5 fibulin 5 ISO (MGI:MGI:3610795|PMID:15528465) BHF-UCL PMID:15528465 MGI:MGI:3610795 NCBI chrNW_004955438:14,073,927...14,144,644
Ensembl chrNW_004955438:14,071,410...14,145,070
JBrowse link
G Gch1 GTP cyclohydrolase 1 ISO (PMID:19666465) BHF-UCL PMID:19666465 NCBI chrNW_004955409:8,624,225...8,670,436
Ensembl chrNW_004955409:8,624,468...8,668,614
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2 like 2 ISO (MGI:MGI:4850200|PMID:20978343) BHF-UCL PMID:20978343 MGI:MGI:4850200 NCBI chrNW_004955403:19,510,122...19,536,428
Ensembl chrNW_004955403:19,532,103...19,535,944
JBrowse link
removal of superoxide radicals term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 ISO (PMID:16945374) HGNC PMID:16945374 NCBI chrNW_004955412:18,158,095...18,160,636
Ensembl chrNW_004955412:18,155,801...18,160,701
JBrowse link
G Atp7a ATPase copper transporting alpha ISO (MGI:MGI:3616392|PMID:16371425) MGI PMID:16371425 MGI:MGI:3616392 NCBI chrNW_004955557:1,355,471...1,515,725
Ensembl chrNW_004955557:1,355,397...1,515,393
JBrowse link
G Fancc FA complementation group C ISO (MGI:MGI:2149223|PMID:11493445) MGI PMID:11493445 MGI:MGI:2149223 NCBI chrNW_004955422:22,031,825...22,246,478
Ensembl chrNW_004955422:22,032,258...22,247,044
JBrowse link
G Mpo myeloperoxidase ISO (MGI:MGI:1333719|PMID:10085024) MGI PMID:10085024 MGI:MGI:1333719 NCBI chrNW_004955451:4,743,744...4,753,358
Ensembl chrNW_004955451:4,743,744...4,753,358
JBrowse link
G Nos3 nitric oxide synthase 3 ISO (PMID:19666465) BHF-UCL PMID:19666465 NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814
JBrowse link
G Prdx1 peroxiredoxin 1 ISO (MGI:MGI:3695235|PMID:16880205)
(MGI:MGI:3611115|PMID:16170382)
MGI PMID:16170382, PMID:16880205 MGI:MGI:3611115, MGI:MGI:3695235 NCBI chrNW_004955464:12,761,390...12,773,413
Ensembl chrNW_004955464:12,761,401...12,773,146
JBrowse link
G Prdx2 peroxiredoxin 2 ISO (PMID:20978343)
(MGI:MGI:4850200|PMID:20978343)
BHF-UCL PMID:20978343 MGI:MGI:4850200 NCBI chrNW_004955415:31,880,801...31,884,453
Ensembl chrNW_004955415:31,880,588...31,884,778
JBrowse link
G Sod1 superoxide dismutase 1 ISO (MGI:MGI:1342989|PMID:10436316), (MGI:MGI:1351737|PMID:10471451), (MGI:MGI:2149223|PMID:11493445), (MGI:MGI:80951|PMID:8673102)
(MGI:MGI:1353351|PMID:10679476)
(MGI:MGI:3625573|PMID:12433839), (MGI:MGI:3710732|PMID:17448893)
(MGI:MGI:2149223|PMID:11493445)
(MGI:MGI:1201750|PMID:9516486), (MGI:MGI:1314762|PMID:9788901)
RGD
MGI
PMID:8673102, PMID:9516486, PMID:9788901, PMID:10436316, PMID:10471451, PMID:10640619, PMID:10679476, PMID:11493445, PMID:12433839, PMID:12514262, PMID:17448893, PMID:21757500 MGI:MGI:1201750, MGI:MGI:1314762, MGI:MGI:1342989, MGI:MGI:1351737, MGI:MGI:1353351, MGI:MGI:2149223, MGI:MGI:3625573, MGI:MGI:3710732, MGI:MGI:80951, RGD:1601266, RGD:634854, RGD:8655968 NCBI chrNW_004955407:31,261,451...31,267,657
Ensembl chrNW_004955407:31,263,863...31,267,727
JBrowse link
G Sod2 superoxide dismutase 2 ISO (MGI:MGI:3765405|PMID:16873728)
(PMID:16179351)
RGD
MGI
BHF-UCL
PMID:12107766, PMID:15642720, PMID:16179351, PMID:16873728, PMID:19439219 MGI:MGI:3765405, RGD:2291939, RGD:2291946, RGD:2317387 NCBI chrNW_004955439:21,209,101...21,223,538
Ensembl chrNW_004955439:21,209,101...21,224,163
JBrowse link
response to superoxide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO (MGI:MGI:3054497|PMID:15340056) MGI PMID:15340056 MGI:MGI:3054497 NCBI chrNW_004955556:745,175...812,215
Ensembl chrNW_004955556:748,231...813,133
JBrowse link
G Sod1 superoxide dismutase 1 ISO (PMID:16790527)
(MGI:MGI:3611643|PMID:16357131)
(MGI:MGI:1201750|PMID:9516486), (MGI:MGI:1314762|PMID:9788901)
UniProtKB
MGI
PMID:9516486, PMID:9788901, PMID:16357131, PMID:16790527 MGI:MGI:1201750, MGI:MGI:1314762, MGI:MGI:3611643 NCBI chrNW_004955407:31,261,451...31,267,657
Ensembl chrNW_004955407:31,263,863...31,267,727
JBrowse link
G Sod2 superoxide dismutase 2 ISO (PMID:16179351)
(MGI:MGI:1930860|PMID:11156968)
(MGI:MGI:3691744|PMID:15642323)
BHF-UCL
MGI
PMID:11156968, PMID:15642323, PMID:16179351 MGI:MGI:1930860, MGI:MGI:3691744 NCBI chrNW_004955439:21,209,101...21,223,538
Ensembl chrNW_004955439:21,209,101...21,224,163
JBrowse link
G Ucp2 uncoupling protein 2 ISO RGD PMID:12372827 RGD:727448 NCBI chrNW_004955414:17,592,914...17,596,477
Ensembl chrNW_004955414:17,592,914...17,596,477
JBrowse link
G Ucp3 uncoupling protein 3 ISO (MGI:MGI:2183181|PMID:11780125) RGD
MGI
PMID:11780125 MGI:MGI:2183181, RGD:737664 NCBI chrNW_004955414:17,558,889...17,578,108
Ensembl chrNW_004955414:17,558,889...17,578,737
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11892
    response to stimulus 6365
      response to chemical 3723
        response to inorganic substance 698
          response to oxygen radical 20
            cellular response to oxygen radical + 17
            response to superoxide + 20
Path 2
Term Annotations click to browse term
  biological_process 11892
    response to stimulus 6365
      response to stress 3034
        response to oxidative stress 472
          response to reactive oxygen species 269
            response to oxygen radical 20
              cellular response to oxygen radical + 17
              response to superoxide + 20
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.