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ONTOLOGY REPORT - ANNOTATIONS


Term:response to oxygen radical
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Accession:GO:0000305 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen radical stimulus. An oxygen radical is any oxygen species that carries a free electron; examples include hydroxyl radicals and the superoxide anion.


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cellular response to superoxide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADPRS ADP-ribosylserine hydrolase ISO (PMID:30401461)
(MGI:MGI:5523722|PMID:24191052)
UniProt
MGI
PMID:24191052, PMID:30401461 MGI:MGI:5523722 NCBI chr 1:35,354,721...35,360,029
Ensembl chr 1:36,529,051...36,534,235
JBrowse link
G GLRX2 glutaredoxin 2 ISO RGD PMID:25126518 RGD:9686060 NCBI chr 1:168,555,858...168,565,949
Ensembl chr 1:172,849,013...172,859,062
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 ISO (MGI:MGI:5523722|PMID:24191052) MGI PMID:24191052 MGI:MGI:5523722 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356
JBrowse link
regulation of removal of superoxide radicals term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD36 CD36 molecule ISO (MGI:MGI:4850200|PMID:20978343) BHF-UCL PMID:20978343 MGI:MGI:4850200 NCBI chr 7:72,566,478...72,643,517
Ensembl chr 7:86,265,114...86,305,865
JBrowse link
G DHFR dihydrofolate reductase ISO (MGI:MGI:5645206|PMID:19666465) BHF-UCL PMID:19666465 MGI:MGI:5645206 NCBI chr 5:34,663,210...34,689,467
Ensembl chr 5:34,938,548...34,967,003
JBrowse link
G FBLN5 fibulin 5 ISO (MGI:MGI:3610795|PMID:15528465) BHF-UCL PMID:15528465 MGI:MGI:3610795 NCBI chr14:72,504,240...72,583,160
Ensembl chr14:91,848,430...91,927,304
JBrowse link
G GCH1 GTP cyclohydrolase 1 ISO (PMID:19666465) BHF-UCL PMID:19666465 NCBI chr14:35,428,676...35,489,359
Ensembl chr14:53,706,723...53,767,393
JBrowse link
G NFE2L2 nuclear factor, erythroid 2 like 2 ISO (MGI:MGI:4850200|PMID:20978343) BHF-UCL PMID:20978343 MGI:MGI:4850200 NCBI chr2B:64,509,446...64,544,600
Ensembl chr2B:182,214,116...182,248,085
JBrowse link
removal of superoxide radicals term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 ISO (PMID:16945374) HGNC PMID:16945374 NCBI chr11:111,659,186...111,661,790
Ensembl chr11:115,591,788...115,594,382
JBrowse link
G ATP7A ATPase copper transporting alpha ISO (MGI:MGI:3616392|PMID:16371425) MGI PMID:16371425 MGI:MGI:3616392 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756
JBrowse link
G FANCC FA complementation group C ISO (MGI:MGI:2149223|PMID:11493445) MGI PMID:11493445 MGI:MGI:2149223 NCBI chr 9:66,201,581...66,418,229
Ensembl chr 9:94,329,971...94,477,198
JBrowse link
G MPO myeloperoxidase ISO (MGI:MGI:1333719|PMID:10085024) MGI PMID:10085024 MGI:MGI:1333719 NCBI chr17:52,333,882...52,357,838
Ensembl chr17:57,201,073...57,212,111
JBrowse link
G MT3 metallothionein 3 ISO (PMID:12383939) UniProtKB PMID:12383939 NCBI chr16:36,875,919...36,877,558 JBrowse link
G NOS3 nitric oxide synthase 3 ISO (PMID:19666465) BHF-UCL PMID:19666465 NCBI chr 7:142,577,334...142,600,702
Ensembl chr 7:154,730,009...154,755,233
JBrowse link
G PRDX1 peroxiredoxin 1 ISO (MGI:MGI:3695235|PMID:16880205)
(MGI:MGI:3611115|PMID:16170382)
MGI PMID:16170382, PMID:16880205 MGI:MGI:3611115, MGI:MGI:3695235 NCBI chr 1:44,813,508...44,824,430
Ensembl chr 1:46,171,453...46,182,018
JBrowse link
G PRDX2 peroxiredoxin 2 ISO (MGI:MGI:4850200|PMID:20978343)
(PMID:20978343)
BHF-UCL PMID:20978343 MGI:MGI:4850200 NCBI chr19:12,359,084...12,363,552
Ensembl chr19:13,103,422...13,107,369
JBrowse link
G SOD1 superoxide dismutase 1 ISO (MGI:MGI:1353351|PMID:10679476)
(MGI:MGI:1342989|PMID:10436316), (MGI:MGI:1351737|PMID:10471451), (MGI:MGI:2149223|PMID:11493445), (MGI:MGI:80951|PMID:8673102)
(MGI:MGI:3625573|PMID:12433839), (MGI:MGI:3710732|PMID:17448893)
(MGI:MGI:1201750|PMID:9516486), (MGI:MGI:1314762|PMID:9788901)
(MGI:MGI:2149223|PMID:11493445)
RGD
MGI
PMID:8673102, PMID:9516486, PMID:9788901, PMID:10436316, PMID:10471451, PMID:10640619, PMID:10679476, PMID:11493445, PMID:12433839, PMID:12514262, PMID:17448893, PMID:21757500 MGI:MGI:1201750, MGI:MGI:1314762, MGI:MGI:1342989, MGI:MGI:1351737, MGI:MGI:1353351, MGI:MGI:2149223, MGI:MGI:3625573, MGI:MGI:3710732, MGI:MGI:80951, RGD:1601266, RGD:634854, RGD:8655968 NCBI chr21:18,029,831...18,037,526 JBrowse link
G SOD2 superoxide dismutase 2 ISO (MGI:MGI:3765405|PMID:16873728)
(PMID:16179351)
RGD
MGI
BHF-UCL
PMID:12107766, PMID:15642720, PMID:16179351, PMID:16873728, PMID:19439219 MGI:MGI:3765405, RGD:2291939, RGD:2291946, RGD:2317387 NCBI chr 6:157,562,814...157,610,155
Ensembl chr 6:162,576,082...162,589,960
JBrowse link
response to superoxide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERCC6 ERCC excision repair 6, chromatin remodeling factor ISO (MGI:MGI:3054497|PMID:15340056) MGI PMID:15340056 MGI:MGI:3054497 NCBI chr10:44,703,720...44,784,948 JBrowse link
G SOD1 superoxide dismutase 1 ISO (PMID:16790527)
(MGI:MGI:1201750|PMID:9516486), (MGI:MGI:1314762|PMID:9788901)
(MGI:MGI:3611643|PMID:16357131)
UniProtKB
MGI
PMID:9516486, PMID:9788901, PMID:16357131, PMID:16790527 MGI:MGI:1201750, MGI:MGI:1314762, MGI:MGI:3611643 NCBI chr21:18,029,831...18,037,526 JBrowse link
G SOD2 superoxide dismutase 2 ISO (PMID:16179351)
(MGI:MGI:1930860|PMID:11156968)
(MGI:MGI:3691744|PMID:15642323)
BHF-UCL
MGI
PMID:11156968, PMID:15642323, PMID:16179351 MGI:MGI:1930860, MGI:MGI:3691744 NCBI chr 6:157,562,814...157,610,155
Ensembl chr 6:162,576,082...162,589,960
JBrowse link
G UCP2 uncoupling protein 2 ISO RGD PMID:12372827 RGD:727448 NCBI chr11:69,047,397...69,056,056
Ensembl chr11:72,354,529...72,363,185
JBrowse link
G UCP3 uncoupling protein 3 ISO (MGI:MGI:2183181|PMID:11780125) RGD
MGI
PMID:11780125 MGI:MGI:2183181, RGD:737664 NCBI chr11:69,072,143...69,085,424
Ensembl chr11:72,380,180...72,389,274
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12561
    response to stimulus 6736
      response to chemical 3922
        response to inorganic substance 718
          response to oxygen radical 21
            cellular response to oxygen radical + 18
            response to superoxide + 21
Path 2
Term Annotations click to browse term
  biological_process 12561
    response to stimulus 6736
      response to stress 3232
        response to oxidative stress 495
          response to reactive oxygen species 280
            response to oxygen radical 21
              cellular response to oxygen radical + 18
              response to superoxide + 21
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.