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ONTOLOGY REPORT - ANNOTATIONS


Term:response to superoxide
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Accession:GO:0000303 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a superoxide stimulus. Superoxide is the anion, oxygen-, formed by addition of one electron to dioxygen (O2) or any compound containing the superoxide anion.


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response to superoxide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO MGI:MGI:1932102 (MGI:MGI:3054497|PMID:15340056) RGD PMID:15340056 MGI:MGI:3054497 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Sod1 superoxide dismutase 1 ISO
ISS
(PMID:16790527)
MGI:MGI:2680903|MGI:MGI:3526701 (MGI:MGI:1201750|PMID:9516486), (MGI:MGI:1314762|PMID:9788901), (MGI:MGI:3611643|PMID:16357131)
GO_REF:0000024
RGD
UniProt
PMID:9516486, PMID:9788901, PMID:16357131, PMID:16790527 GO_REF:0000024, MGI:MGI:1201750, MGI:MGI:1314762, MGI:MGI:3611643 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Sod2 superoxide dismutase 2 ISO (PMID:16179351)
MGI:MGI:1857344|MGI:MGI:1857480 (MGI:MGI:1930860|PMID:11156968), (MGI:MGI:3691744|PMID:15642323)
RGD PMID:11156968, PMID:15642323, PMID:16179351 MGI:MGI:1930860, MGI:MGI:3691744 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
G Ucp2 uncoupling protein 2 IDA RGD PMID:12372827 RGD:727448 NCBI chr 1:165,506,375...165,512,744
Ensembl chr 1:165,506,361...165,512,744
JBrowse link
G Ucp3 uncoupling protein 3 IDA
ISO
MGI:MGI:2183204 (MGI:MGI:2183181|PMID:11780125) RGD PMID:11780125, PMID:11780125 MGI:MGI:2183181, RGD:737664 NCBI chr 1:165,482,912...165,495,895
Ensembl chr 1:165,482,155...165,496,206
JBrowse link
cellular response to superoxide term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adprs ADP-ribosylserine hydrolase ISO (MGI:MGI:5523722|PMID:24191052)
(PMID:30401461)
RGD PMID:24191052, PMID:30401461 MGI:MGI:5523722 NCBI chr 5:144,336,312...144,341,586
Ensembl chr 5:144,336,312...144,341,586
JBrowse link
G Glrx2 glutaredoxin 2 IEP RGD PMID:25126518 RGD:9686060 NCBI chr13:60,529,057...60,552,115
Ensembl chr13:60,529,932...60,537,916
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO (MGI:MGI:5523722|PMID:24191052) RGD PMID:24191052 MGI:MGI:5523722 NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
regulation of removal of superoxide radicals term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule ISO (MGI:MGI:4850200|PMID:20978343) RGD PMID:20978343 MGI:MGI:4850200 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Dhfr dihydrofolate reductase ISO (MGI:MGI:5645206|PMID:19666465) RGD PMID:19666465 MGI:MGI:5645206 NCBI chr 2:21,931,887...21,958,927
Ensembl chr 2:21,931,493...21,962,453
JBrowse link
G Fbln5 fibulin 5 ISO (MGI:MGI:3610795|PMID:15528465) RGD PMID:15528465 MGI:MGI:3610795 NCBI chr 6:125,644,797...125,723,957
Ensembl chr 6:125,644,804...125,723,944
JBrowse link
G Gch1 GTP cyclohydrolase 1 ISO (PMID:19666465) RGD PMID:19666465 NCBI chr15:23,935,011...23,968,971
Ensembl chr15:23,934,585...23,969,011
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 ISO (MGI:MGI:4850200|PMID:20978343) RGD PMID:20978343 MGI:MGI:4850200 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
removal of superoxide radicals term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07012795.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:208,738,132...208,739,047 JBrowse link
G Apoa4 apolipoprotein A4 ISO
IEA
(PMID:16945374)
GO_REF:0000107
RGD
Ensembl
PMID:16945374 GO_REF:0000107 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Atp7a ATPase copper transporting alpha ISO MGI:MGI:1856097 (MGI:MGI:3616392|PMID:16371425) RGD PMID:16371425 MGI:MGI:3616392 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G Ccs copper chaperone for superoxide dismutase IEA
IBA
GO_REF:0000108
PMID:21873635
GOC PMID:21873635 GO_REF:0000108, RGD:13792537 NCBI chr 1:220,075,251...220,096,319
Ensembl chr 1:220,075,247...220,096,404
JBrowse link
G Fancc FA complementation group C ISO
IEA
MGI:MGI:98351 (MGI:MGI:2149223|PMID:11493445)
GO_REF:0000107
RGD
Ensembl
PMID:11493445 GO_REF:0000107, MGI:MGI:2149223 NCBI chr17:826,512...955,703
Ensembl chr17:833,509...955,615
JBrowse link
G Mpo myeloperoxidase ISO MGI:MGI:2176344 (MGI:MGI:1333719|PMID:10085024) RGD PMID:10085024 MGI:MGI:1333719 NCBI chr10:75,087,892...75,098,260
Ensembl chr10:75,087,892...75,098,260
JBrowse link
G Mt3 metallothionein 3 ISO
ISS
(PMID:12383939)
GO_REF:0000024
RGD
UniProt
PMID:12383939 GO_REF:0000024 NCBI chr19:11,324,708...11,326,112
Ensembl chr19:11,324,698...11,326,139
JBrowse link
G Nos3 nitric oxide synthase 3 ISO
IEA
(PMID:19666465)
GO_REF:0000107
RGD
Ensembl
PMID:19666465 GO_REF:0000107 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:38,422,210...38,437,103
Ensembl chr19:38,422,164...38,437,180
JBrowse link
G Prdx1 peroxiredoxin 1 ISO
IBA
MGI:MGI:3611932 (MGI:MGI:3611115|PMID:16170382), (MGI:MGI:3695235|PMID:16880205)
PMID:21873635
RGD PMID:16170382, PMID:16880205, PMID:21873635 MGI:MGI:3611115, MGI:MGI:3695235, RGD:13792537 NCBI chr 5:135,536,413...135,551,986
Ensembl chr 5:135,536,413...135,551,990
JBrowse link
G Prdx2 peroxiredoxin 2 ISO
IBA
IEA
(PMID:20978343)
PMID:21873635
GO_REF:0000107
(MGI:MGI:4850200|PMID:20978343)
RGD
Ensembl
PMID:20978343, PMID:21873635 GO_REF:0000107, MGI:MGI:4850200, RGD:13792537 NCBI chr19:26,084,816...26,090,095
Ensembl chr19:26,084,903...26,090,094
JBrowse link
G Sod1 superoxide dismutase 1 TAS
IBA
ISO
ISS
IMP
IDA
PMID:21873635
MGI:MGI:1857872|MGI:MGI:1857873|MGI:MGI:2387861|MGI:MGI:3526701|MGI:MGI:95480 (MGI:MGI:1201750|PMID:9516486), (MGI:MGI:1314762|PMID:9788901), (MGI:MGI:1342989|PMID:10436316), (MGI:MGI:1351737|PMID:10471451), (MGI:MGI:1353351|PMID:10679476), (MGI:MGI:2149223|PMID:11493445), (MGI:MGI:3625573|PMID:12433839), (MGI:MGI:3710732|PMID:17448893), (MGI:MGI:80951|PMID:8673102)
GO_REF:0000024
RGD
UniProt
PMID:8673102, PMID:9516486, PMID:9788901, PMID:10436316, PMID:10471451, PMID:10679476, PMID:11493445, PMID:12433839, PMID:17448893, PMID:2703531, PMID:21873635, PMID:21757500, PMID:10640619, PMID:12514262 GO_REF:0000024, MGI:MGI:1201750, MGI:MGI:1314762, MGI:MGI:1342989, MGI:MGI:1351737, MGI:MGI:1353351, MGI:MGI:2149223, MGI:MGI:3625573, MGI:MGI:3710732, MGI:MGI:80951, RGD:730094, RGD:13792537, RGD:8655968, RGD:1601266, RGD:634854 NCBI chr11:30,363,282...30,368,858
Ensembl chr11:30,363,280...30,368,862
JBrowse link
G Sod2 superoxide dismutase 2 IDA
ISO
(PMID:16179351)
MGI:MGI:1857129|MGI:MGI:1857480 (MGI:MGI:3765405|PMID:16873728)
RGD PMID:16179351, PMID:16873728, PMID:12107766, PMID:15642720, PMID:19439219 MGI:MGI:3765405, RGD:2291939, RGD:2291946, RGD:2317387 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
G Sod3 superoxide dismutase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:60,958,583...60,971,143
Ensembl chr14:60,958,592...60,964,324
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to chemical 6342
        response to inorganic substance 817
          response to oxygen radical 26
            response to superoxide 25
              cellular response to superoxide + 22
Path 2
Term Annotations click to browse term
  biological_process 20028
    response to stimulus 10583
      response to stress 4063
        response to oxidative stress 541
          response to reactive oxygen species 300
            response to oxygen radical 26
              response to superoxide 25
                cellular response to superoxide + 22
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.